From 1ee9cd3694927b9b5c268e64b2b3928d9816c7e7 Mon Sep 17 00:00:00 2001 From: Kiriyama Kazuhiko Date: Thu, 7 Nov 2002 00:21:47 +0000 Subject: [PATCH] Update 1.5.1 -> 1.6.0 --- math/R-letter/Makefile | 3 +- math/R-letter/pkg-plist | 8912 +++++++++++++++++++++++++++----------- math/R-project/Makefile | 3 +- math/R-project/pkg-plist | 8912 +++++++++++++++++++++++++++----------- math/R/Makefile | 3 +- math/R/pkg-plist | 8912 +++++++++++++++++++++++++++----------- 6 files changed, 19371 insertions(+), 7374 deletions(-) diff --git a/math/R-letter/Makefile b/math/R-letter/Makefile index bf9a29f9de91..fb84ca3b6437 100644 --- a/math/R-letter/Makefile +++ b/math/R-letter/Makefile @@ -6,8 +6,7 @@ # PORTNAME= R -PORTVERSION= 1.5.1 -PORTREVISION= 1 +PORTVERSION= 1.6.0 CATEGORIES= math MASTER_SITES= http://cran.r-project.org/src/base/ \ ftp://cran.r-project.org/pub/R/src/base/ \ diff --git a/math/R-letter/pkg-plist b/math/R-letter/pkg-plist index 55cacb258d68..c2ceede93705 100644 --- a/math/R-letter/pkg-plist +++ b/math/R-letter/pkg-plist @@ -1,12 +1,45 @@ bin/R +lib/R/AUTHORS +lib/R/COPYING +lib/R/COPYING.LIB +lib/R/COPYRIGHTS +lib/R/FAQ +lib/R/NEWS +lib/R/RESOURCES +lib/R/THANKS +lib/R/afm/AdobeStd.enc +lib/R/afm/AdobeSym.enc +lib/R/afm/CM_boldx_10.afm +lib/R/afm/CM_boldx_italic_10.afm +lib/R/afm/CM_italic_10.afm +lib/R/afm/CM_regular_10.afm +lib/R/afm/CM_symbol_10.afm +lib/R/afm/ISOLatin1.enc +lib/R/afm/ISOLatin2.enc +lib/R/afm/ISOLatin9.enc +lib/R/afm/MacRoman.enc +lib/R/afm/PDFDoc.enc +lib/R/afm/WinAnsi.enc +lib/R/afm/a010013l.afm +lib/R/afm/a010015l.afm +lib/R/afm/a010033l.afm +lib/R/afm/a010035l.afm lib/R/afm/agd_____.afm lib/R/afm/agdo____.afm lib/R/afm/agw_____.afm lib/R/afm/agwo____.afm +lib/R/afm/b018012l.afm +lib/R/afm/b018015l.afm +lib/R/afm/b018032l.afm +lib/R/afm/b018035l.afm lib/R/afm/bkd_____.afm lib/R/afm/bkdi____.afm lib/R/afm/bkl_____.afm lib/R/afm/bkli____.afm +lib/R/afm/c059013l.afm +lib/R/afm/c059016l.afm +lib/R/afm/c059033l.afm +lib/R/afm/c059036l.afm lib/R/afm/cob_____.afm lib/R/afm/cobo____.afm lib/R/afm/com_____.afm @@ -19,31 +52,6 @@ lib/R/afm/hvnb____.afm lib/R/afm/hvnbo___.afm lib/R/afm/hvno____.afm lib/R/afm/hvo_____.afm -lib/R/afm/ncb_____.afm -lib/R/afm/ncbi____.afm -lib/R/afm/nci_____.afm -lib/R/afm/ncr_____.afm -lib/R/afm/pob_____.afm -lib/R/afm/pobi____.afm -lib/R/afm/poi_____.afm -lib/R/afm/por_____.afm -lib/R/afm/tib_____.afm -lib/R/afm/tibi____.afm -lib/R/afm/tii_____.afm -lib/R/afm/tir_____.afm -lib/R/afm/sy______.afm -lib/R/afm/a010013l.afm -lib/R/afm/a010015l.afm -lib/R/afm/a010033l.afm -lib/R/afm/a010035l.afm -lib/R/afm/b018012l.afm -lib/R/afm/b018015l.afm -lib/R/afm/b018032l.afm -lib/R/afm/b018035l.afm -lib/R/afm/n022003l.afm -lib/R/afm/n022004l.afm -lib/R/afm/n022023l.afm -lib/R/afm/n022024l.afm lib/R/afm/n019003l.afm lib/R/afm/n019004l.afm lib/R/afm/n019023l.afm @@ -52,60 +60,83 @@ lib/R/afm/n019043l.afm lib/R/afm/n019044l.afm lib/R/afm/n019063l.afm lib/R/afm/n019064l.afm 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lib/R/library/base/R-ex/Round.R +lib/R/library/base/R-ex/Rprof.R lib/R/library/base/R-ex/SignRank.R lib/R/library/base/R-ex/Special.R lib/R/library/base/R-ex/Startup.R @@ -1585,9 +989,10 @@ lib/R/library/base/R-ex/abbreviate.R lib/R/library/base/R-ex/abline.R lib/R/library/base/R-ex/add1.R lib/R/library/base/R-ex/aggregate.R -lib/R/library/base/R-ex/alias.R +lib/R/library/base/R-ex/agrep.R lib/R/library/base/R-ex/airmiles.R lib/R/library/base/R-ex/airquality.R +lib/R/library/base/R-ex/alias.R lib/R/library/base/R-ex/all.R lib/R/library/base/R-ex/all.equal.R lib/R/library/base/R-ex/allnames.R @@ -1616,6 +1021,7 @@ lib/R/library/base/R-ex/attr.R lib/R/library/base/R-ex/attributes.R lib/R/library/base/R-ex/autoload.R lib/R/library/base/R-ex/ave.R +lib/R/library/base/R-ex/axTicks.R lib/R/library/base/R-ex/axis.POSIXct.R lib/R/library/base/R-ex/axis.R lib/R/library/base/R-ex/backsolve.R @@ -1628,6 +1034,7 @@ lib/R/library/base/R-ex/box.R lib/R/library/base/R-ex/boxplot.R lib/R/library/base/R-ex/boxplot.formula.R lib/R/library/base/R-ex/boxplot.stats.R +lib/R/library/base/R-ex/browseEnv.R lib/R/library/base/R-ex/bxp.R lib/R/library/base/R-ex/by.R lib/R/library/base/R-ex/c.R @@ -1638,7 +1045,6 @@ lib/R/library/base/R-ex/case.names.R lib/R/library/base/R-ex/cat.R lib/R/library/base/R-ex/cbind.R lib/R/library/base/R-ex/char.expand.R -lib/R/library/base/R-ex/t.R lib/R/library/base/R-ex/character.R lib/R/library/base/R-ex/charmatch.R lib/R/library/base/R-ex/chartr.R @@ -1716,7 +1122,6 @@ lib/R/library/base/R-ex/environment.R lib/R/library/base/R-ex/esoph.R lib/R/library/base/R-ex/euro.R lib/R/library/base/R-ex/eval.R -lib/R/library/base/R-ex/fft.R lib/R/library/base/R-ex/example.R lib/R/library/base/R-ex/exists.R lib/R/library/base/R-ex/expand.grid.R @@ -1727,6 +1132,7 @@ lib/R/library/base/R-ex/factor.R lib/R/library/base/R-ex/factor.scope.R lib/R/library/base/R-ex/faithful.R lib/R/library/base/R-ex/family.R +lib/R/library/base/R-ex/fft.R lib/R/library/base/R-ex/file.access.R lib/R/library/base/R-ex/file.info.R lib/R/library/base/R-ex/file.show.R @@ -1740,13 +1146,13 @@ lib/R/library/base/R-ex/format.R lib/R/library/base/R-ex/format.info.R lib/R/library/base/R-ex/formatDL.R lib/R/library/base/R-ex/formatc.R -lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/formula.R lib/R/library/base/R-ex/fourfoldplot.R lib/R/library/base/R-ex/freeny.R lib/R/library/base/R-ex/ftable.R lib/R/library/base/R-ex/ftable.formula.R lib/R/library/base/R-ex/function.R +lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/gc.time.R lib/R/library/base/R-ex/get.R lib/R/library/base/R-ex/getNativeSymbolInfo.R @@ -1756,6 +1162,7 @@ lib/R/library/base/R-ex/gl.R lib/R/library/base/R-ex/glm.R lib/R/library/base/R-ex/glm.control.R lib/R/library/base/R-ex/glm.summary.R +lib/R/library/base/R-ex/gnome.R lib/R/library/base/R-ex/gray.R lib/R/library/base/R-ex/grep.R lib/R/library/base/R-ex/grid.R @@ -1814,7 +1221,6 @@ lib/R/library/base/R-ex/lowess.R lib/R/library/base/R-ex/ls.R lib/R/library/base/R-ex/ls.diag.R lib/R/library/base/R-ex/lsfit.R -lib/R/library/base/R-ex/machine.R lib/R/library/base/R-ex/mad.R lib/R/library/base/R-ex/mahalanobis.R lib/R/library/base/R-ex/make.link.R @@ -1839,7 +1245,6 @@ lib/R/library/base/R-ex/merge.R lib/R/library/base/R-ex/methods.R lib/R/library/base/R-ex/missing.R lib/R/library/base/R-ex/mode.R -lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/model.extract.R lib/R/library/base/R-ex/model.frame.R lib/R/library/base/R-ex/model.matrix.R @@ -1847,11 +1252,13 @@ lib/R/library/base/R-ex/model.tables.R lib/R/library/base/R-ex/morley.R lib/R/library/base/R-ex/mosaicplot.R lib/R/library/base/R-ex/mtcars.R +lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/n2mfrow.R lib/R/library/base/R-ex/na.action.R lib/R/library/base/R-ex/na.fail.R lib/R/library/base/R-ex/name.R lib/R/library/base/R-ex/names.R +lib/R/library/base/R-ex/namespace.R lib/R/library/base/R-ex/nargs.R lib/R/library/base/R-ex/nchar.R lib/R/library/base/R-ex/nextn.R @@ -1861,6 +1268,7 @@ lib/R/library/base/R-ex/nlm.R lib/R/library/base/R-ex/noquote.R lib/R/library/base/R-ex/notyet.R lib/R/library/base/R-ex/nrow.R +lib/R/library/base/R-ex/nsl.R lib/R/library/base/R-ex/numeric.R lib/R/library/base/R-ex/object.size.R lib/R/library/base/R-ex/on.exit.R @@ -1885,7 +1293,7 @@ lib/R/library/base/R-ex/pdf.R lib/R/library/base/R-ex/persp.R lib/R/library/base/R-ex/phones.R lib/R/library/base/R-ex/pictex.R -lib/R/library/base/R-ex/piechart.R +lib/R/library/base/R-ex/pie.R lib/R/library/base/R-ex/plot.R lib/R/library/base/R-ex/plot.lm.R lib/R/library/base/R-ex/plot.table.R @@ -1898,6 +1306,7 @@ lib/R/library/base/R-ex/plotformula.R lib/R/library/base/R-ex/plothistogram.R lib/R/library/base/R-ex/plotmath.R lib/R/library/base/R-ex/pmatch.R +lib/R/library/base/R-ex/png.R lib/R/library/base/R-ex/points.R lib/R/library/base/R-ex/poly.R lib/R/library/base/R-ex/polygon.R @@ -1998,6 +1407,7 @@ 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lib/R/library/base/R-ex/toString.R lib/R/library/base/R-ex/trace.R @@ -2036,6 +1448,7 @@ lib/R/library/base/R-ex/unlist.R lib/R/library/base/R-ex/unname.R lib/R/library/base/R-ex/update.R lib/R/library/base/R-ex/update.formula.R +lib/R/library/base/R-ex/update.packages.R lib/R/library/base/R-ex/url.show.R lib/R/library/base/R-ex/uspop.R lib/R/library/base/R-ex/vector.R @@ -2060,667 +1473,82 @@ lib/R/library/base/R-ex/zC.R lib/R/library/base/R-ex/zMachine.R lib/R/library/base/R-ex/zMethods.R lib/R/library/base/R-ex/zScript.R -lib/R/library/base/R-ex/Rprof.R -lib/R/library/base/R-ex/gnome.R -lib/R/library/base/R-ex/nsl.R -lib/R/library/base/R-ex/png.R -lib/R/library/base/R-ex/AIC.R -lib/R/library/base/latex/x11.tex -lib/R/library/base/latex/AIC.logLik.tex -lib/R/library/base/latex/Arithmetic.tex -lib/R/library/base/latex/Bessel.tex -lib/R/library/base/latex/Beta.tex -lib/R/library/base/latex/Binomial.tex -lib/R/library/base/latex/Cauchy.tex -lib/R/library/base/latex/Chisquare.tex 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+lib/R/library/base/data/sunspots.R +lib/R/library/base/data/swiss.tab +lib/R/library/base/data/trees.R +lib/R/library/base/data/uspop.R +lib/R/library/base/data/volcano.R +lib/R/library/base/data/warpbreaks.R +lib/R/library/base/data/women.R +lib/R/library/base/demo/00Index +lib/R/library/base/demo/glm.vr.R +lib/R/library/base/demo/graphics.R +lib/R/library/base/demo/image.R +lib/R/library/base/demo/is.things.R +lib/R/library/base/demo/lm.glm.R +lib/R/library/base/demo/nlm.R +lib/R/library/base/demo/persp.R +lib/R/library/base/demo/recursion.R +lib/R/library/base/demo/scoping.R lib/R/library/base/help/AIC lib/R/library/base/help/AIC.logLik +lib/R/library/base/help/AnIndex lib/R/library/base/help/Arithmetic +lib/R/library/base/help/AsIs +lib/R/library/base/help/BATCH lib/R/library/base/help/Bessel lib/R/library/base/help/Beta lib/R/library/base/help/Binomial +lib/R/library/base/help/COMPILE lib/R/library/base/help/Cauchy lib/R/library/base/help/Chisquare lib/R/library/base/help/Comparison @@ -2740,12 +1568,14 @@ lib/R/library/base/help/GammaDist lib/R/library/base/help/Geometric lib/R/library/base/help/HairEyeColor lib/R/library/base/help/Hershey -lib/R/library/base/help/IQR lib/R/library/base/help/Hyperbolic lib/R/library/base/help/Hypergeometric +lib/R/library/base/help/INSTALL +lib/R/library/base/help/IQR lib/R/library/base/help/InsectSprays lib/R/library/base/help/Internal lib/R/library/base/help/Japanese +lib/R/library/base/help/LINK lib/R/library/base/help/Last.value lib/R/library/base/help/LifeCycleSavings lib/R/library/base/help/Log @@ -2765,13 +1595,18 @@ lib/R/library/base/help/PlantGrowth lib/R/library/base/help/Platform lib/R/library/base/help/Poisson lib/R/library/base/help/Primitive -lib/R/library/base/help/Random-user +lib/R/library/base/help/REMOVE +lib/R/library/base/help/RHOME lib/R/library/base/help/Random +lib/R/library/base/help/Random-user lib/R/library/base/help/RdUtils lib/R/library/base/help/Recall lib/R/library/base/help/Rhome lib/R/library/base/help/Round +lib/R/library/base/help/Rprof +lib/R/library/base/help/SHLIB lib/R/library/base/help/SignRank +lib/R/library/base/help/Signals lib/R/library/base/help/Special lib/R/library/base/help/Startup lib/R/library/base/help/Syntax @@ -2797,6 +1632,7 @@ lib/R/library/base/help/abbreviate lib/R/library/base/help/abline lib/R/library/base/help/add1 lib/R/library/base/help/aggregate +lib/R/library/base/help/agrep lib/R/library/base/help/airmiles lib/R/library/base/help/airquality lib/R/library/base/help/alias @@ -2830,8 +1666,9 @@ lib/R/library/base/help/attr lib/R/library/base/help/attributes lib/R/library/base/help/autoload lib/R/library/base/help/ave -lib/R/library/base/help/axis.POSIXct +lib/R/library/base/help/axTicks lib/R/library/base/help/axis +lib/R/library/base/help/axis.POSIXct lib/R/library/base/help/backsolve lib/R/library/base/help/bandwidth lib/R/library/base/help/barplot @@ -2842,6 +1679,8 @@ lib/R/library/base/help/box lib/R/library/base/help/boxplot lib/R/library/base/help/boxplot.formula lib/R/library/base/help/boxplot.stats +lib/R/library/base/help/browseEnv +lib/R/library/base/help/browseURL lib/R/library/base/help/browser lib/R/library/base/help/bug.report lib/R/library/base/help/builtins @@ -2893,8 +1732,8 @@ lib/R/library/base/help/cov.wt lib/R/library/base/help/crossprod lib/R/library/base/help/cumsum lib/R/library/base/help/curve -lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/cut +lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/data lib/R/library/base/help/data.class lib/R/library/base/help/data.frame @@ -2989,14 +1828,16 @@ lib/R/library/base/help/glm lib/R/library/base/help/glm.control lib/R/library/base/help/glm.summaries lib/R/library/base/help/glm.summary +lib/R/library/base/help/gnome lib/R/library/base/help/gray lib/R/library/base/help/grep lib/R/library/base/help/grid +lib/R/library/base/help/gtk lib/R/library/base/help/help lib/R/library/base/help/help.search lib/R/library/base/help/help.start -lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hist +lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hsv lib/R/library/base/help/identical lib/R/library/base/help/identify @@ -3048,8 +1889,8 @@ lib/R/library/base/help/locales lib/R/library/base/help/locator lib/R/library/base/help/logLik lib/R/library/base/help/logLik.glm -lib/R/library/base/help/logical lib/R/library/base/help/logLik.lm +lib/R/library/base/help/logical lib/R/library/base/help/loglin lib/R/library/base/help/longley lib/R/library/base/help/lower.tri @@ -3058,7 +1899,6 @@ lib/R/library/base/help/ls lib/R/library/base/help/ls.diag lib/R/library/base/help/ls.print lib/R/library/base/help/lsfit -lib/R/library/base/help/machine lib/R/library/base/help/mad lib/R/library/base/help/mahalanobis lib/R/library/base/help/make.link @@ -3099,6 +1939,7 @@ lib/R/library/base/help/na.fail lib/R/library/base/help/nafns lib/R/library/base/help/name lib/R/library/base/help/names +lib/R/library/base/help/namespace lib/R/library/base/help/naprint lib/R/library/base/help/nargs lib/R/library/base/help/nchar @@ -3110,6 +1951,7 @@ lib/R/library/base/help/nlm lib/R/library/base/help/noquote lib/R/library/base/help/notyet lib/R/library/base/help/nrow +lib/R/library/base/help/nsl lib/R/library/base/help/numeric lib/R/library/base/help/object.size lib/R/library/base/help/octmode @@ -3138,7 +1980,7 @@ lib/R/library/base/help/pdf lib/R/library/base/help/persp lib/R/library/base/help/phones lib/R/library/base/help/pictex -lib/R/library/base/help/piechart +lib/R/library/base/help/pie lib/R/library/base/help/plot lib/R/library/base/help/plot.density lib/R/library/base/help/plot.lm @@ -3152,6 +1994,7 @@ lib/R/library/base/help/plotformula lib/R/library/base/help/plothistogram lib/R/library/base/help/plotmath lib/R/library/base/help/pmatch +lib/R/library/base/help/png lib/R/library/base/help/points lib/R/library/base/help/poly lib/R/library/base/help/polygon @@ -3160,7 +2003,6 @@ lib/R/library/base/help/pos.to.env lib/R/library/base/help/postscript lib/R/library/base/help/power lib/R/library/base/help/ppoints -lib/R/library/base/help/qr lib/R/library/base/help/precip lib/R/library/base/help/predict lib/R/library/base/help/predict.glm @@ -3184,11 +2026,12 @@ lib/R/library/base/help/prop.table lib/R/library/base/help/pushBack lib/R/library/base/help/putenv lib/R/library/base/help/qqnorm +lib/R/library/base/help/qr lib/R/library/base/help/qraux lib/R/library/base/help/quakes lib/R/library/base/help/quantile +lib/R/library/base/help/quartz lib/R/library/base/help/quit -lib/R/library/base/help/rep lib/R/library/base/help/randu lib/R/library/base/help/range lib/R/library/base/help/rank @@ -3207,6 +2050,7 @@ lib/R/library/base/help/rect lib/R/library/base/help/reg.finalizer lib/R/library/base/help/relevel lib/R/library/base/help/remove.packages +lib/R/library/base/help/rep lib/R/library/base/help/replace lib/R/library/base/help/replications lib/R/library/base/help/reshape @@ -3217,9 +2061,9 @@ lib/R/library/base/help/rgb lib/R/library/base/help/rivers lib/R/library/base/help/rle lib/R/library/base/help/rm +lib/R/library/base/help/round.POSIXt lib/R/library/base/help/row lib/R/library/base/help/rowsum -lib/R/library/base/help/round.POSIXt lib/R/library/base/help/rug lib/R/library/base/help/sample lib/R/library/base/help/save @@ -3233,8 +2077,8 @@ lib/R/library/base/help/se.contrast lib/R/library/base/help/search lib/R/library/base/help/seek lib/R/library/base/help/segments -lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/seq +lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/sequence lib/R/library/base/help/sets lib/R/library/base/help/showConnections @@ -3273,6 +2117,7 @@ lib/R/library/base/help/sum lib/R/library/base/help/summary lib/R/library/base/help/summary.aov lib/R/library/base/help/summary.manova +lib/R/library/base/help/summaryRprof lib/R/library/base/help/sunflowerplot lib/R/library/base/help/sunspots lib/R/library/base/help/svd @@ -3283,6 +2128,7 @@ lib/R/library/base/help/symbols lib/R/library/base/help/symnum lib/R/library/base/help/sys.parent lib/R/library/base/help/sys.source +lib/R/library/base/help/system lib/R/library/base/help/system.file lib/R/library/base/help/system.time lib/R/library/base/help/t @@ -3302,13 +2148,13 @@ lib/R/library/base/help/textconnections lib/R/library/base/help/time lib/R/library/base/help/title lib/R/library/base/help/toString -lib/R/library/base/help/try lib/R/library/base/help/trace lib/R/library/base/help/traceback lib/R/library/base/help/transform lib/R/library/base/help/trees -lib/R/library/base/help/ts-methods +lib/R/library/base/help/try lib/R/library/base/help/ts +lib/R/library/base/help/ts-methods lib/R/library/base/help/tsp lib/R/library/base/help/type.convert lib/R/library/base/help/typeof @@ -3323,6 +2169,7 @@ lib/R/library/base/help/update.formula lib/R/library/base/help/update.packages lib/R/library/base/help/url.show lib/R/library/base/help/uspop +lib/R/library/base/help/vcov lib/R/library/base/help/vector lib/R/library/base/help/volcano lib/R/library/base/help/warning @@ -3330,15 +2177,16 @@ lib/R/library/base/help/warnings lib/R/library/base/help/warpbreaks lib/R/library/base/help/weekday.POSIXt lib/R/library/base/help/weighted.mean +lib/R/library/base/help/weighted.residuals lib/R/library/base/help/which lib/R/library/base/help/which.min -lib/R/library/base/help/weighted.residuals lib/R/library/base/help/window lib/R/library/base/help/with lib/R/library/base/help/women lib/R/library/base/help/write lib/R/library/base/help/write.table lib/R/library/base/help/writeLines +lib/R/library/base/help/x11 lib/R/library/base/help/xfig lib/R/library/base/help/xtabs lib/R/library/base/help/xy.coords @@ -3349,91 +2197,4861 @@ lib/R/library/base/help/zMethods lib/R/library/base/help/zScript lib/R/library/base/help/zcbind.ts lib/R/library/base/help/zip.file.extract 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+lib/R/share/perl/R/Rdtools.pm +lib/R/share/perl/R/Utils.pm +lib/R/share/perl/R/Vars.pm +lib/R/share/perl/Rd2contents.pl +lib/R/share/perl/Text/DelimMatch.pm +lib/R/share/perl/build-help-mac.pl +lib/R/share/perl/build-help-windows.pl +lib/R/share/perl/build-help.pl +lib/R/share/perl/extract-examples.pl +lib/R/share/perl/extract-usage.pl +lib/R/share/perl/hhw-to-rtf.pl +lib/R/share/perl/html-rtf.pl +lib/R/share/perl/maketitle.pl +lib/R/share/perl/massage-Examples.pl +lib/R/share/perl/parse-html.pl +lib/R/share/sh/dcf.sh +lib/R/share/sh/echo.sh +lib/R/share/sh/help-links.sh +lib/R/share/sh/help-print.sh +lib/R/share/texmf/Rd.sty +lib/R/share/texmf/Sweave.sty +lib/R/share/texmf/hyperref.cfg +lib/R/share/texmf/omsaer.fd +lib/R/share/texmf/omsaett.fd +lib/R/share/texmf/omscmtt.fd @dirrm lib/R/share/texmf @dirrm lib/R/share/sh @dirrm lib/R/share/perl/Text @@ -3898,6 +7772,15 @@ lib/R/THANKS @dirrm lib/R/library/tcltk/R-ex @dirrm lib/R/library/tcltk/R @dirrm lib/R/library/tcltk +@dirrm lib/R/library/survival/man +@dirrm lib/R/library/survival/libs +@dirrm lib/R/library/survival/latex +@dirrm lib/R/library/survival/html +@dirrm lib/R/library/survival/help +@dirrm lib/R/library/survival/data +@dirrm lib/R/library/survival/R-ex +@dirrm lib/R/library/survival/R +@dirrm lib/R/library/survival @dirrm lib/R/library/stepfun/man @dirrm lib/R/library/stepfun/latex @dirrm lib/R/library/stepfun/html @@ -3913,6 +7796,32 @@ lib/R/THANKS @dirrm lib/R/library/splines/R-ex @dirrm lib/R/library/splines/R @dirrm lib/R/library/splines +@dirrm lib/R/library/spatial/man +@dirrm lib/R/library/spatial/libs +@dirrm lib/R/library/spatial/latex +@dirrm lib/R/library/spatial/html +@dirrm lib/R/library/spatial/help +@dirrm lib/R/library/spatial/data +@dirrm lib/R/library/spatial/R-ex +@dirrm lib/R/library/spatial/R +@dirrm lib/R/library/spatial +@dirrm lib/R/library/rpart/man +@dirrm lib/R/library/rpart/libs +@dirrm lib/R/library/rpart/latex +@dirrm lib/R/library/rpart/html +@dirrm lib/R/library/rpart/help +@dirrm lib/R/library/rpart/data +@dirrm lib/R/library/rpart/R-ex +@dirrm lib/R/library/rpart/R +@dirrm lib/R/library/rpart +@dirrm lib/R/library/nnet/man +@dirrm lib/R/library/nnet/libs +@dirrm lib/R/library/nnet/latex +@dirrm lib/R/library/nnet/html +@dirrm lib/R/library/nnet/help +@dirrm lib/R/library/nnet/R-ex +@dirrm lib/R/library/nnet/R +@dirrm lib/R/library/nnet @dirrm lib/R/library/nls/man @dirrm lib/R/library/nls/libs @dirrm lib/R/library/nls/latex @@ -3922,6 +7831,17 @@ lib/R/THANKS @dirrm lib/R/library/nls/R-ex @dirrm lib/R/library/nls/R @dirrm lib/R/library/nls +@dirrm lib/R/library/nlme/scripts +@dirrm lib/R/library/nlme/mlbook +@dirrm lib/R/library/nlme/man +@dirrm lib/R/library/nlme/libs +@dirrm lib/R/library/nlme/latex +@dirrm lib/R/library/nlme/html +@dirrm lib/R/library/nlme/help +@dirrm lib/R/library/nlme/data +@dirrm lib/R/library/nlme/R-ex +@dirrm lib/R/library/nlme/R +@dirrm lib/R/library/nlme @dirrm lib/R/library/mva/man @dirrm lib/R/library/mva/libs @dirrm lib/R/library/mva/latex @@ -3940,6 +7860,14 @@ lib/R/THANKS @dirrm lib/R/library/modreg/R-ex @dirrm lib/R/library/modreg/R @dirrm lib/R/library/modreg +@dirrm lib/R/library/mgcv/man +@dirrm lib/R/library/mgcv/libs +@dirrm lib/R/library/mgcv/latex +@dirrm lib/R/library/mgcv/html +@dirrm lib/R/library/mgcv/help +@dirrm lib/R/library/mgcv/R-ex +@dirrm lib/R/library/mgcv/R +@dirrm lib/R/library/mgcv @dirrm lib/R/library/methods/man @dirrm lib/R/library/methods/libs @dirrm lib/R/library/methods/latex @@ -3956,6 +7884,33 @@ lib/R/THANKS @dirrm lib/R/library/lqs/R-ex @dirrm lib/R/library/lqs/R @dirrm lib/R/library/lqs +@dirrm lib/R/library/lattice/man +@dirrm lib/R/library/lattice/libs +@dirrm lib/R/library/lattice/latex +@dirrm lib/R/library/lattice/html +@dirrm lib/R/library/lattice/help +@dirrm lib/R/library/lattice/demo +@dirrm lib/R/library/lattice/data +@dirrm lib/R/library/lattice/R-ex +@dirrm lib/R/library/lattice/R +@dirrm lib/R/library/lattice +@dirrm lib/R/library/grid/man +@dirrm lib/R/library/grid/libs +@dirrm lib/R/library/grid/latex +@dirrm lib/R/library/grid/html +@dirrm lib/R/library/grid/help +@dirrm lib/R/library/grid/doc +@dirrm lib/R/library/grid/R-ex +@dirrm lib/R/library/grid/R +@dirrm lib/R/library/grid +@dirrm lib/R/library/foreign/man +@dirrm lib/R/library/foreign/libs +@dirrm lib/R/library/foreign/latex +@dirrm lib/R/library/foreign/html +@dirrm lib/R/library/foreign/help +@dirrm lib/R/library/foreign/R-ex +@dirrm lib/R/library/foreign/R +@dirrm lib/R/library/foreign @dirrm lib/R/library/eda/man @dirrm lib/R/library/eda/libs @dirrm lib/R/library/eda/latex @@ -3973,6 +7928,31 @@ lib/R/THANKS @dirrm lib/R/library/ctest/R-ex @dirrm lib/R/library/ctest/R @dirrm lib/R/library/ctest +@dirrm lib/R/library/cluster/man +@dirrm lib/R/library/cluster/libs +@dirrm lib/R/library/cluster/latex +@dirrm lib/R/library/cluster/html +@dirrm lib/R/library/cluster/help +@dirrm lib/R/library/cluster/data +@dirrm lib/R/library/cluster/R-ex +@dirrm lib/R/library/cluster/R +@dirrm lib/R/library/cluster +@dirrm lib/R/library/class/man +@dirrm lib/R/library/class/libs +@dirrm lib/R/library/class/latex +@dirrm lib/R/library/class/html +@dirrm lib/R/library/class/help +@dirrm lib/R/library/class/R-ex +@dirrm lib/R/library/class/R +@dirrm lib/R/library/class +@dirrm lib/R/library/boot/man +@dirrm lib/R/library/boot/latex +@dirrm lib/R/library/boot/html +@dirrm lib/R/library/boot/help +@dirrm lib/R/library/boot/data +@dirrm lib/R/library/boot/R-ex +@dirrm lib/R/library/boot/R +@dirrm lib/R/library/boot @dirrm lib/R/library/base/man @dirrm lib/R/library/base/latex @dirrm lib/R/library/base/html @@ -3982,6 +7962,26 @@ lib/R/THANKS @dirrm lib/R/library/base/R-ex @dirrm lib/R/library/base/R @dirrm lib/R/library/base +@dirrm lib/R/library/MASS/scripts3 +@dirrm lib/R/library/MASS/scripts +@dirrm lib/R/library/MASS/man +@dirrm lib/R/library/MASS/libs +@dirrm lib/R/library/MASS/latex +@dirrm lib/R/library/MASS/html +@dirrm lib/R/library/MASS/help +@dirrm lib/R/library/MASS/data +@dirrm lib/R/library/MASS/R-ex +@dirrm lib/R/library/MASS/R +@dirrm lib/R/library/MASS +@dirrm lib/R/library/KernSmooth/man +@dirrm lib/R/library/KernSmooth/libs +@dirrm lib/R/library/KernSmooth/latex +@dirrm lib/R/library/KernSmooth/html +@dirrm lib/R/library/KernSmooth/help +@dirrm lib/R/library/KernSmooth/data +@dirrm lib/R/library/KernSmooth/R-ex +@dirrm lib/R/library/KernSmooth/R +@dirrm lib/R/library/KernSmooth @dirrm lib/R/library @dirrm lib/R/include/R_ext @dirrm lib/R/include diff --git a/math/R-project/Makefile b/math/R-project/Makefile index bf9a29f9de91..fb84ca3b6437 100644 --- a/math/R-project/Makefile +++ b/math/R-project/Makefile @@ -6,8 +6,7 @@ # PORTNAME= R -PORTVERSION= 1.5.1 -PORTREVISION= 1 +PORTVERSION= 1.6.0 CATEGORIES= math MASTER_SITES= http://cran.r-project.org/src/base/ \ ftp://cran.r-project.org/pub/R/src/base/ \ diff --git a/math/R-project/pkg-plist b/math/R-project/pkg-plist index 55cacb258d68..c2ceede93705 100644 --- a/math/R-project/pkg-plist +++ b/math/R-project/pkg-plist @@ -1,12 +1,45 @@ bin/R +lib/R/AUTHORS +lib/R/COPYING +lib/R/COPYING.LIB +lib/R/COPYRIGHTS +lib/R/FAQ +lib/R/NEWS +lib/R/RESOURCES +lib/R/THANKS +lib/R/afm/AdobeStd.enc +lib/R/afm/AdobeSym.enc +lib/R/afm/CM_boldx_10.afm +lib/R/afm/CM_boldx_italic_10.afm +lib/R/afm/CM_italic_10.afm +lib/R/afm/CM_regular_10.afm +lib/R/afm/CM_symbol_10.afm +lib/R/afm/ISOLatin1.enc +lib/R/afm/ISOLatin2.enc +lib/R/afm/ISOLatin9.enc +lib/R/afm/MacRoman.enc +lib/R/afm/PDFDoc.enc +lib/R/afm/WinAnsi.enc +lib/R/afm/a010013l.afm +lib/R/afm/a010015l.afm +lib/R/afm/a010033l.afm +lib/R/afm/a010035l.afm lib/R/afm/agd_____.afm lib/R/afm/agdo____.afm lib/R/afm/agw_____.afm lib/R/afm/agwo____.afm +lib/R/afm/b018012l.afm +lib/R/afm/b018015l.afm +lib/R/afm/b018032l.afm +lib/R/afm/b018035l.afm lib/R/afm/bkd_____.afm lib/R/afm/bkdi____.afm lib/R/afm/bkl_____.afm lib/R/afm/bkli____.afm +lib/R/afm/c059013l.afm +lib/R/afm/c059016l.afm +lib/R/afm/c059033l.afm +lib/R/afm/c059036l.afm lib/R/afm/cob_____.afm lib/R/afm/cobo____.afm lib/R/afm/com_____.afm @@ -19,31 +52,6 @@ lib/R/afm/hvnb____.afm lib/R/afm/hvnbo___.afm lib/R/afm/hvno____.afm lib/R/afm/hvo_____.afm -lib/R/afm/ncb_____.afm -lib/R/afm/ncbi____.afm -lib/R/afm/nci_____.afm -lib/R/afm/ncr_____.afm -lib/R/afm/pob_____.afm -lib/R/afm/pobi____.afm -lib/R/afm/poi_____.afm -lib/R/afm/por_____.afm -lib/R/afm/tib_____.afm -lib/R/afm/tibi____.afm -lib/R/afm/tii_____.afm -lib/R/afm/tir_____.afm -lib/R/afm/sy______.afm -lib/R/afm/a010013l.afm -lib/R/afm/a010015l.afm -lib/R/afm/a010033l.afm -lib/R/afm/a010035l.afm -lib/R/afm/b018012l.afm -lib/R/afm/b018015l.afm -lib/R/afm/b018032l.afm -lib/R/afm/b018035l.afm -lib/R/afm/n022003l.afm -lib/R/afm/n022004l.afm -lib/R/afm/n022023l.afm -lib/R/afm/n022024l.afm lib/R/afm/n019003l.afm lib/R/afm/n019004l.afm lib/R/afm/n019023l.afm @@ -52,60 +60,83 @@ lib/R/afm/n019043l.afm 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lib/R/library/base/R-ex/backsolve.R @@ -1628,6 +1034,7 @@ lib/R/library/base/R-ex/box.R lib/R/library/base/R-ex/boxplot.R lib/R/library/base/R-ex/boxplot.formula.R lib/R/library/base/R-ex/boxplot.stats.R +lib/R/library/base/R-ex/browseEnv.R lib/R/library/base/R-ex/bxp.R lib/R/library/base/R-ex/by.R lib/R/library/base/R-ex/c.R @@ -1638,7 +1045,6 @@ lib/R/library/base/R-ex/case.names.R lib/R/library/base/R-ex/cat.R lib/R/library/base/R-ex/cbind.R lib/R/library/base/R-ex/char.expand.R -lib/R/library/base/R-ex/t.R lib/R/library/base/R-ex/character.R lib/R/library/base/R-ex/charmatch.R lib/R/library/base/R-ex/chartr.R @@ -1716,7 +1122,6 @@ lib/R/library/base/R-ex/environment.R lib/R/library/base/R-ex/esoph.R lib/R/library/base/R-ex/euro.R lib/R/library/base/R-ex/eval.R -lib/R/library/base/R-ex/fft.R lib/R/library/base/R-ex/example.R lib/R/library/base/R-ex/exists.R lib/R/library/base/R-ex/expand.grid.R @@ -1727,6 +1132,7 @@ lib/R/library/base/R-ex/factor.R lib/R/library/base/R-ex/factor.scope.R lib/R/library/base/R-ex/faithful.R lib/R/library/base/R-ex/family.R +lib/R/library/base/R-ex/fft.R lib/R/library/base/R-ex/file.access.R lib/R/library/base/R-ex/file.info.R lib/R/library/base/R-ex/file.show.R @@ -1740,13 +1146,13 @@ lib/R/library/base/R-ex/format.R lib/R/library/base/R-ex/format.info.R lib/R/library/base/R-ex/formatDL.R lib/R/library/base/R-ex/formatc.R -lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/formula.R lib/R/library/base/R-ex/fourfoldplot.R lib/R/library/base/R-ex/freeny.R lib/R/library/base/R-ex/ftable.R lib/R/library/base/R-ex/ftable.formula.R lib/R/library/base/R-ex/function.R +lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/gc.time.R lib/R/library/base/R-ex/get.R lib/R/library/base/R-ex/getNativeSymbolInfo.R @@ -1756,6 +1162,7 @@ lib/R/library/base/R-ex/gl.R lib/R/library/base/R-ex/glm.R lib/R/library/base/R-ex/glm.control.R lib/R/library/base/R-ex/glm.summary.R +lib/R/library/base/R-ex/gnome.R lib/R/library/base/R-ex/gray.R lib/R/library/base/R-ex/grep.R lib/R/library/base/R-ex/grid.R @@ -1814,7 +1221,6 @@ lib/R/library/base/R-ex/lowess.R lib/R/library/base/R-ex/ls.R lib/R/library/base/R-ex/ls.diag.R lib/R/library/base/R-ex/lsfit.R -lib/R/library/base/R-ex/machine.R lib/R/library/base/R-ex/mad.R lib/R/library/base/R-ex/mahalanobis.R lib/R/library/base/R-ex/make.link.R @@ -1839,7 +1245,6 @@ lib/R/library/base/R-ex/merge.R lib/R/library/base/R-ex/methods.R lib/R/library/base/R-ex/missing.R lib/R/library/base/R-ex/mode.R -lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/model.extract.R lib/R/library/base/R-ex/model.frame.R lib/R/library/base/R-ex/model.matrix.R @@ -1847,11 +1252,13 @@ lib/R/library/base/R-ex/model.tables.R lib/R/library/base/R-ex/morley.R lib/R/library/base/R-ex/mosaicplot.R lib/R/library/base/R-ex/mtcars.R +lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/n2mfrow.R lib/R/library/base/R-ex/na.action.R lib/R/library/base/R-ex/na.fail.R lib/R/library/base/R-ex/name.R lib/R/library/base/R-ex/names.R +lib/R/library/base/R-ex/namespace.R lib/R/library/base/R-ex/nargs.R lib/R/library/base/R-ex/nchar.R lib/R/library/base/R-ex/nextn.R @@ -1861,6 +1268,7 @@ lib/R/library/base/R-ex/nlm.R lib/R/library/base/R-ex/noquote.R lib/R/library/base/R-ex/notyet.R lib/R/library/base/R-ex/nrow.R +lib/R/library/base/R-ex/nsl.R lib/R/library/base/R-ex/numeric.R lib/R/library/base/R-ex/object.size.R lib/R/library/base/R-ex/on.exit.R @@ -1885,7 +1293,7 @@ lib/R/library/base/R-ex/pdf.R lib/R/library/base/R-ex/persp.R lib/R/library/base/R-ex/phones.R lib/R/library/base/R-ex/pictex.R -lib/R/library/base/R-ex/piechart.R +lib/R/library/base/R-ex/pie.R lib/R/library/base/R-ex/plot.R lib/R/library/base/R-ex/plot.lm.R lib/R/library/base/R-ex/plot.table.R @@ -1898,6 +1306,7 @@ lib/R/library/base/R-ex/plotformula.R lib/R/library/base/R-ex/plothistogram.R lib/R/library/base/R-ex/plotmath.R lib/R/library/base/R-ex/pmatch.R +lib/R/library/base/R-ex/png.R lib/R/library/base/R-ex/points.R lib/R/library/base/R-ex/poly.R lib/R/library/base/R-ex/polygon.R @@ -1998,6 +1407,7 @@ lib/R/library/base/R-ex/substr.R lib/R/library/base/R-ex/summary.R lib/R/library/base/R-ex/summary.aov.R lib/R/library/base/R-ex/summary.manova.R +lib/R/library/base/R-ex/summaryRprof.R lib/R/library/base/R-ex/sunflowerplot.R lib/R/library/base/R-ex/sunspots.R lib/R/library/base/R-ex/svd.R @@ -2007,8 +1417,10 @@ lib/R/library/base/R-ex/switch.R lib/R/library/base/R-ex/symbols.R lib/R/library/base/R-ex/symnum.R lib/R/library/base/R-ex/sys.parent.R +lib/R/library/base/R-ex/system.R lib/R/library/base/R-ex/system.file.R lib/R/library/base/R-ex/system.time.R +lib/R/library/base/R-ex/t.R lib/R/library/base/R-ex/table.R lib/R/library/base/R-ex/tabulate.R lib/R/library/base/R-ex/tapply.R @@ -2018,8 +1430,8 @@ lib/R/library/base/R-ex/taskCallbackNames.R lib/R/library/base/R-ex/tempfile.R lib/R/library/base/R-ex/termplot.R lib/R/library/base/R-ex/text.R -lib/R/library/base/R-ex/time.R lib/R/library/base/R-ex/textconnections.R +lib/R/library/base/R-ex/time.R lib/R/library/base/R-ex/title.R lib/R/library/base/R-ex/toString.R lib/R/library/base/R-ex/trace.R @@ -2036,6 +1448,7 @@ lib/R/library/base/R-ex/unlist.R lib/R/library/base/R-ex/unname.R lib/R/library/base/R-ex/update.R lib/R/library/base/R-ex/update.formula.R +lib/R/library/base/R-ex/update.packages.R lib/R/library/base/R-ex/url.show.R lib/R/library/base/R-ex/uspop.R lib/R/library/base/R-ex/vector.R @@ -2060,667 +1473,82 @@ lib/R/library/base/R-ex/zC.R lib/R/library/base/R-ex/zMachine.R lib/R/library/base/R-ex/zMethods.R lib/R/library/base/R-ex/zScript.R -lib/R/library/base/R-ex/Rprof.R -lib/R/library/base/R-ex/gnome.R -lib/R/library/base/R-ex/nsl.R -lib/R/library/base/R-ex/png.R -lib/R/library/base/R-ex/AIC.R -lib/R/library/base/latex/x11.tex -lib/R/library/base/latex/AIC.logLik.tex -lib/R/library/base/latex/Arithmetic.tex -lib/R/library/base/latex/Bessel.tex 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+lib/R/library/base/data/randu.R +lib/R/library/base/data/rivers.R +lib/R/library/base/data/sleep.R +lib/R/library/base/data/stackloss.R +lib/R/library/base/data/state.R +lib/R/library/base/data/sunspots.R +lib/R/library/base/data/swiss.tab +lib/R/library/base/data/trees.R +lib/R/library/base/data/uspop.R +lib/R/library/base/data/volcano.R +lib/R/library/base/data/warpbreaks.R +lib/R/library/base/data/women.R +lib/R/library/base/demo/00Index +lib/R/library/base/demo/glm.vr.R +lib/R/library/base/demo/graphics.R +lib/R/library/base/demo/image.R +lib/R/library/base/demo/is.things.R +lib/R/library/base/demo/lm.glm.R +lib/R/library/base/demo/nlm.R +lib/R/library/base/demo/persp.R +lib/R/library/base/demo/recursion.R +lib/R/library/base/demo/scoping.R lib/R/library/base/help/AIC lib/R/library/base/help/AIC.logLik +lib/R/library/base/help/AnIndex lib/R/library/base/help/Arithmetic +lib/R/library/base/help/AsIs +lib/R/library/base/help/BATCH lib/R/library/base/help/Bessel lib/R/library/base/help/Beta lib/R/library/base/help/Binomial +lib/R/library/base/help/COMPILE lib/R/library/base/help/Cauchy lib/R/library/base/help/Chisquare lib/R/library/base/help/Comparison @@ -2740,12 +1568,14 @@ lib/R/library/base/help/GammaDist lib/R/library/base/help/Geometric lib/R/library/base/help/HairEyeColor lib/R/library/base/help/Hershey -lib/R/library/base/help/IQR lib/R/library/base/help/Hyperbolic lib/R/library/base/help/Hypergeometric +lib/R/library/base/help/INSTALL +lib/R/library/base/help/IQR lib/R/library/base/help/InsectSprays lib/R/library/base/help/Internal lib/R/library/base/help/Japanese +lib/R/library/base/help/LINK lib/R/library/base/help/Last.value lib/R/library/base/help/LifeCycleSavings lib/R/library/base/help/Log @@ -2765,13 +1595,18 @@ lib/R/library/base/help/PlantGrowth lib/R/library/base/help/Platform lib/R/library/base/help/Poisson lib/R/library/base/help/Primitive -lib/R/library/base/help/Random-user +lib/R/library/base/help/REMOVE +lib/R/library/base/help/RHOME lib/R/library/base/help/Random +lib/R/library/base/help/Random-user lib/R/library/base/help/RdUtils lib/R/library/base/help/Recall lib/R/library/base/help/Rhome lib/R/library/base/help/Round +lib/R/library/base/help/Rprof +lib/R/library/base/help/SHLIB lib/R/library/base/help/SignRank +lib/R/library/base/help/Signals lib/R/library/base/help/Special lib/R/library/base/help/Startup lib/R/library/base/help/Syntax @@ -2797,6 +1632,7 @@ lib/R/library/base/help/abbreviate lib/R/library/base/help/abline lib/R/library/base/help/add1 lib/R/library/base/help/aggregate +lib/R/library/base/help/agrep lib/R/library/base/help/airmiles lib/R/library/base/help/airquality lib/R/library/base/help/alias @@ -2830,8 +1666,9 @@ lib/R/library/base/help/attr lib/R/library/base/help/attributes lib/R/library/base/help/autoload lib/R/library/base/help/ave -lib/R/library/base/help/axis.POSIXct +lib/R/library/base/help/axTicks lib/R/library/base/help/axis +lib/R/library/base/help/axis.POSIXct lib/R/library/base/help/backsolve lib/R/library/base/help/bandwidth lib/R/library/base/help/barplot @@ -2842,6 +1679,8 @@ lib/R/library/base/help/box lib/R/library/base/help/boxplot lib/R/library/base/help/boxplot.formula lib/R/library/base/help/boxplot.stats +lib/R/library/base/help/browseEnv +lib/R/library/base/help/browseURL lib/R/library/base/help/browser lib/R/library/base/help/bug.report lib/R/library/base/help/builtins @@ -2893,8 +1732,8 @@ lib/R/library/base/help/cov.wt lib/R/library/base/help/crossprod lib/R/library/base/help/cumsum lib/R/library/base/help/curve -lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/cut +lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/data lib/R/library/base/help/data.class lib/R/library/base/help/data.frame @@ -2989,14 +1828,16 @@ lib/R/library/base/help/glm lib/R/library/base/help/glm.control lib/R/library/base/help/glm.summaries lib/R/library/base/help/glm.summary +lib/R/library/base/help/gnome lib/R/library/base/help/gray lib/R/library/base/help/grep lib/R/library/base/help/grid +lib/R/library/base/help/gtk lib/R/library/base/help/help lib/R/library/base/help/help.search lib/R/library/base/help/help.start -lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hist +lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hsv lib/R/library/base/help/identical lib/R/library/base/help/identify @@ -3048,8 +1889,8 @@ lib/R/library/base/help/locales lib/R/library/base/help/locator lib/R/library/base/help/logLik lib/R/library/base/help/logLik.glm -lib/R/library/base/help/logical lib/R/library/base/help/logLik.lm +lib/R/library/base/help/logical lib/R/library/base/help/loglin lib/R/library/base/help/longley lib/R/library/base/help/lower.tri @@ -3058,7 +1899,6 @@ lib/R/library/base/help/ls lib/R/library/base/help/ls.diag lib/R/library/base/help/ls.print lib/R/library/base/help/lsfit -lib/R/library/base/help/machine lib/R/library/base/help/mad lib/R/library/base/help/mahalanobis lib/R/library/base/help/make.link @@ -3099,6 +1939,7 @@ lib/R/library/base/help/na.fail lib/R/library/base/help/nafns lib/R/library/base/help/name lib/R/library/base/help/names +lib/R/library/base/help/namespace lib/R/library/base/help/naprint lib/R/library/base/help/nargs lib/R/library/base/help/nchar @@ -3110,6 +1951,7 @@ lib/R/library/base/help/nlm lib/R/library/base/help/noquote lib/R/library/base/help/notyet lib/R/library/base/help/nrow +lib/R/library/base/help/nsl lib/R/library/base/help/numeric lib/R/library/base/help/object.size lib/R/library/base/help/octmode @@ -3138,7 +1980,7 @@ lib/R/library/base/help/pdf lib/R/library/base/help/persp lib/R/library/base/help/phones lib/R/library/base/help/pictex -lib/R/library/base/help/piechart +lib/R/library/base/help/pie lib/R/library/base/help/plot lib/R/library/base/help/plot.density lib/R/library/base/help/plot.lm @@ -3152,6 +1994,7 @@ lib/R/library/base/help/plotformula lib/R/library/base/help/plothistogram lib/R/library/base/help/plotmath lib/R/library/base/help/pmatch +lib/R/library/base/help/png lib/R/library/base/help/points lib/R/library/base/help/poly lib/R/library/base/help/polygon @@ -3160,7 +2003,6 @@ lib/R/library/base/help/pos.to.env lib/R/library/base/help/postscript lib/R/library/base/help/power lib/R/library/base/help/ppoints -lib/R/library/base/help/qr lib/R/library/base/help/precip lib/R/library/base/help/predict lib/R/library/base/help/predict.glm @@ -3184,11 +2026,12 @@ lib/R/library/base/help/prop.table lib/R/library/base/help/pushBack lib/R/library/base/help/putenv lib/R/library/base/help/qqnorm +lib/R/library/base/help/qr lib/R/library/base/help/qraux lib/R/library/base/help/quakes lib/R/library/base/help/quantile +lib/R/library/base/help/quartz lib/R/library/base/help/quit -lib/R/library/base/help/rep lib/R/library/base/help/randu lib/R/library/base/help/range lib/R/library/base/help/rank @@ -3207,6 +2050,7 @@ lib/R/library/base/help/rect lib/R/library/base/help/reg.finalizer lib/R/library/base/help/relevel lib/R/library/base/help/remove.packages +lib/R/library/base/help/rep lib/R/library/base/help/replace lib/R/library/base/help/replications lib/R/library/base/help/reshape @@ -3217,9 +2061,9 @@ lib/R/library/base/help/rgb lib/R/library/base/help/rivers lib/R/library/base/help/rle lib/R/library/base/help/rm +lib/R/library/base/help/round.POSIXt lib/R/library/base/help/row lib/R/library/base/help/rowsum -lib/R/library/base/help/round.POSIXt lib/R/library/base/help/rug lib/R/library/base/help/sample lib/R/library/base/help/save @@ -3233,8 +2077,8 @@ lib/R/library/base/help/se.contrast lib/R/library/base/help/search lib/R/library/base/help/seek lib/R/library/base/help/segments -lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/seq +lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/sequence lib/R/library/base/help/sets lib/R/library/base/help/showConnections @@ -3273,6 +2117,7 @@ lib/R/library/base/help/sum lib/R/library/base/help/summary lib/R/library/base/help/summary.aov lib/R/library/base/help/summary.manova +lib/R/library/base/help/summaryRprof lib/R/library/base/help/sunflowerplot lib/R/library/base/help/sunspots lib/R/library/base/help/svd @@ -3283,6 +2128,7 @@ lib/R/library/base/help/symbols lib/R/library/base/help/symnum lib/R/library/base/help/sys.parent lib/R/library/base/help/sys.source +lib/R/library/base/help/system lib/R/library/base/help/system.file lib/R/library/base/help/system.time lib/R/library/base/help/t @@ -3302,13 +2148,13 @@ lib/R/library/base/help/textconnections lib/R/library/base/help/time lib/R/library/base/help/title lib/R/library/base/help/toString -lib/R/library/base/help/try lib/R/library/base/help/trace lib/R/library/base/help/traceback lib/R/library/base/help/transform lib/R/library/base/help/trees -lib/R/library/base/help/ts-methods +lib/R/library/base/help/try lib/R/library/base/help/ts +lib/R/library/base/help/ts-methods lib/R/library/base/help/tsp lib/R/library/base/help/type.convert lib/R/library/base/help/typeof @@ -3323,6 +2169,7 @@ lib/R/library/base/help/update.formula lib/R/library/base/help/update.packages lib/R/library/base/help/url.show lib/R/library/base/help/uspop +lib/R/library/base/help/vcov lib/R/library/base/help/vector lib/R/library/base/help/volcano lib/R/library/base/help/warning @@ -3330,15 +2177,16 @@ lib/R/library/base/help/warnings lib/R/library/base/help/warpbreaks lib/R/library/base/help/weekday.POSIXt lib/R/library/base/help/weighted.mean +lib/R/library/base/help/weighted.residuals lib/R/library/base/help/which lib/R/library/base/help/which.min -lib/R/library/base/help/weighted.residuals lib/R/library/base/help/window lib/R/library/base/help/with lib/R/library/base/help/women lib/R/library/base/help/write lib/R/library/base/help/write.table lib/R/library/base/help/writeLines +lib/R/library/base/help/x11 lib/R/library/base/help/xfig lib/R/library/base/help/xtabs lib/R/library/base/help/xy.coords @@ -3349,91 +2197,4861 @@ lib/R/library/base/help/zMethods lib/R/library/base/help/zScript lib/R/library/base/help/zcbind.ts lib/R/library/base/help/zip.file.extract -lib/R/library/base/help/BATCH -lib/R/library/base/help/COMPILE -lib/R/library/base/help/INSTALL -lib/R/library/base/help/LINK -lib/R/library/base/help/REMOVE -lib/R/library/base/help/RHOME -lib/R/library/base/help/Rprof -lib/R/library/base/help/SHLIB -lib/R/library/base/help/Signals -lib/R/library/base/help/gnome -lib/R/library/base/help/gtk -lib/R/library/base/help/nsl -lib/R/library/base/help/png -lib/R/library/base/help/system -lib/R/library/base/help/AnIndex -lib/R/library/base/data/women.R -lib/R/library/base/data/Formaldehyde.R -lib/R/library/base/data/HairEyeColor.R -lib/R/library/base/data/InsectSprays.R -lib/R/library/base/data/LifeCycleSavings.R -lib/R/library/base/data/OrchardSprays.R -lib/R/library/base/data/PlantGrowth.R -lib/R/library/base/data/Titanic.R 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+lib/R/share/perl/R/Rdtools.pm +lib/R/share/perl/R/Utils.pm +lib/R/share/perl/R/Vars.pm +lib/R/share/perl/Rd2contents.pl +lib/R/share/perl/Text/DelimMatch.pm +lib/R/share/perl/build-help-mac.pl +lib/R/share/perl/build-help-windows.pl +lib/R/share/perl/build-help.pl +lib/R/share/perl/extract-examples.pl +lib/R/share/perl/extract-usage.pl +lib/R/share/perl/hhw-to-rtf.pl +lib/R/share/perl/html-rtf.pl +lib/R/share/perl/maketitle.pl +lib/R/share/perl/massage-Examples.pl +lib/R/share/perl/parse-html.pl +lib/R/share/sh/dcf.sh +lib/R/share/sh/echo.sh +lib/R/share/sh/help-links.sh +lib/R/share/sh/help-print.sh +lib/R/share/texmf/Rd.sty +lib/R/share/texmf/Sweave.sty +lib/R/share/texmf/hyperref.cfg +lib/R/share/texmf/omsaer.fd +lib/R/share/texmf/omsaett.fd +lib/R/share/texmf/omscmtt.fd @dirrm lib/R/share/texmf @dirrm lib/R/share/sh @dirrm lib/R/share/perl/Text @@ -3898,6 +7772,15 @@ lib/R/THANKS @dirrm lib/R/library/tcltk/R-ex @dirrm lib/R/library/tcltk/R @dirrm lib/R/library/tcltk +@dirrm lib/R/library/survival/man +@dirrm lib/R/library/survival/libs +@dirrm lib/R/library/survival/latex +@dirrm lib/R/library/survival/html +@dirrm lib/R/library/survival/help +@dirrm lib/R/library/survival/data +@dirrm lib/R/library/survival/R-ex +@dirrm lib/R/library/survival/R +@dirrm lib/R/library/survival @dirrm lib/R/library/stepfun/man @dirrm lib/R/library/stepfun/latex @dirrm lib/R/library/stepfun/html @@ -3913,6 +7796,32 @@ lib/R/THANKS @dirrm lib/R/library/splines/R-ex @dirrm lib/R/library/splines/R @dirrm lib/R/library/splines +@dirrm lib/R/library/spatial/man +@dirrm lib/R/library/spatial/libs +@dirrm lib/R/library/spatial/latex +@dirrm lib/R/library/spatial/html +@dirrm lib/R/library/spatial/help +@dirrm lib/R/library/spatial/data +@dirrm lib/R/library/spatial/R-ex +@dirrm lib/R/library/spatial/R +@dirrm lib/R/library/spatial +@dirrm lib/R/library/rpart/man +@dirrm lib/R/library/rpart/libs +@dirrm lib/R/library/rpart/latex +@dirrm lib/R/library/rpart/html +@dirrm lib/R/library/rpart/help +@dirrm lib/R/library/rpart/data +@dirrm lib/R/library/rpart/R-ex +@dirrm lib/R/library/rpart/R +@dirrm lib/R/library/rpart +@dirrm lib/R/library/nnet/man +@dirrm lib/R/library/nnet/libs +@dirrm lib/R/library/nnet/latex +@dirrm lib/R/library/nnet/html +@dirrm lib/R/library/nnet/help +@dirrm lib/R/library/nnet/R-ex +@dirrm lib/R/library/nnet/R +@dirrm lib/R/library/nnet @dirrm lib/R/library/nls/man @dirrm lib/R/library/nls/libs @dirrm lib/R/library/nls/latex @@ -3922,6 +7831,17 @@ lib/R/THANKS @dirrm lib/R/library/nls/R-ex @dirrm lib/R/library/nls/R @dirrm lib/R/library/nls +@dirrm lib/R/library/nlme/scripts +@dirrm lib/R/library/nlme/mlbook +@dirrm lib/R/library/nlme/man +@dirrm lib/R/library/nlme/libs +@dirrm lib/R/library/nlme/latex +@dirrm lib/R/library/nlme/html +@dirrm lib/R/library/nlme/help +@dirrm lib/R/library/nlme/data +@dirrm lib/R/library/nlme/R-ex +@dirrm lib/R/library/nlme/R +@dirrm lib/R/library/nlme @dirrm lib/R/library/mva/man @dirrm lib/R/library/mva/libs @dirrm lib/R/library/mva/latex @@ -3940,6 +7860,14 @@ lib/R/THANKS @dirrm lib/R/library/modreg/R-ex @dirrm lib/R/library/modreg/R @dirrm lib/R/library/modreg +@dirrm lib/R/library/mgcv/man +@dirrm lib/R/library/mgcv/libs +@dirrm lib/R/library/mgcv/latex +@dirrm lib/R/library/mgcv/html +@dirrm lib/R/library/mgcv/help +@dirrm lib/R/library/mgcv/R-ex +@dirrm lib/R/library/mgcv/R +@dirrm lib/R/library/mgcv @dirrm lib/R/library/methods/man @dirrm lib/R/library/methods/libs @dirrm lib/R/library/methods/latex @@ -3956,6 +7884,33 @@ lib/R/THANKS @dirrm lib/R/library/lqs/R-ex @dirrm lib/R/library/lqs/R @dirrm lib/R/library/lqs +@dirrm lib/R/library/lattice/man +@dirrm lib/R/library/lattice/libs +@dirrm lib/R/library/lattice/latex +@dirrm lib/R/library/lattice/html +@dirrm lib/R/library/lattice/help +@dirrm lib/R/library/lattice/demo +@dirrm lib/R/library/lattice/data +@dirrm lib/R/library/lattice/R-ex +@dirrm lib/R/library/lattice/R +@dirrm lib/R/library/lattice +@dirrm lib/R/library/grid/man +@dirrm lib/R/library/grid/libs +@dirrm lib/R/library/grid/latex +@dirrm lib/R/library/grid/html +@dirrm lib/R/library/grid/help +@dirrm lib/R/library/grid/doc +@dirrm lib/R/library/grid/R-ex +@dirrm lib/R/library/grid/R +@dirrm lib/R/library/grid +@dirrm lib/R/library/foreign/man +@dirrm lib/R/library/foreign/libs +@dirrm lib/R/library/foreign/latex +@dirrm lib/R/library/foreign/html +@dirrm lib/R/library/foreign/help +@dirrm lib/R/library/foreign/R-ex +@dirrm lib/R/library/foreign/R +@dirrm lib/R/library/foreign @dirrm lib/R/library/eda/man @dirrm lib/R/library/eda/libs @dirrm lib/R/library/eda/latex @@ -3973,6 +7928,31 @@ lib/R/THANKS @dirrm lib/R/library/ctest/R-ex @dirrm lib/R/library/ctest/R @dirrm lib/R/library/ctest +@dirrm lib/R/library/cluster/man +@dirrm lib/R/library/cluster/libs +@dirrm lib/R/library/cluster/latex +@dirrm lib/R/library/cluster/html +@dirrm lib/R/library/cluster/help +@dirrm lib/R/library/cluster/data +@dirrm 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lib/R/library/MASS/html +@dirrm lib/R/library/MASS/help +@dirrm lib/R/library/MASS/data +@dirrm lib/R/library/MASS/R-ex +@dirrm lib/R/library/MASS/R +@dirrm lib/R/library/MASS +@dirrm lib/R/library/KernSmooth/man +@dirrm lib/R/library/KernSmooth/libs +@dirrm lib/R/library/KernSmooth/latex +@dirrm lib/R/library/KernSmooth/html +@dirrm lib/R/library/KernSmooth/help +@dirrm lib/R/library/KernSmooth/data +@dirrm lib/R/library/KernSmooth/R-ex +@dirrm lib/R/library/KernSmooth/R +@dirrm lib/R/library/KernSmooth @dirrm lib/R/library @dirrm lib/R/include/R_ext @dirrm lib/R/include diff --git a/math/R/Makefile b/math/R/Makefile index bf9a29f9de91..fb84ca3b6437 100644 --- a/math/R/Makefile +++ b/math/R/Makefile @@ -6,8 +6,7 @@ # PORTNAME= R -PORTVERSION= 1.5.1 -PORTREVISION= 1 +PORTVERSION= 1.6.0 CATEGORIES= math MASTER_SITES= http://cran.r-project.org/src/base/ \ ftp://cran.r-project.org/pub/R/src/base/ \ diff --git a/math/R/pkg-plist b/math/R/pkg-plist index 55cacb258d68..c2ceede93705 100644 --- a/math/R/pkg-plist +++ b/math/R/pkg-plist @@ -1,12 +1,45 @@ bin/R +lib/R/AUTHORS +lib/R/COPYING +lib/R/COPYING.LIB +lib/R/COPYRIGHTS +lib/R/FAQ +lib/R/NEWS +lib/R/RESOURCES +lib/R/THANKS +lib/R/afm/AdobeStd.enc +lib/R/afm/AdobeSym.enc +lib/R/afm/CM_boldx_10.afm +lib/R/afm/CM_boldx_italic_10.afm +lib/R/afm/CM_italic_10.afm +lib/R/afm/CM_regular_10.afm +lib/R/afm/CM_symbol_10.afm +lib/R/afm/ISOLatin1.enc +lib/R/afm/ISOLatin2.enc +lib/R/afm/ISOLatin9.enc +lib/R/afm/MacRoman.enc +lib/R/afm/PDFDoc.enc +lib/R/afm/WinAnsi.enc +lib/R/afm/a010013l.afm +lib/R/afm/a010015l.afm +lib/R/afm/a010033l.afm +lib/R/afm/a010035l.afm lib/R/afm/agd_____.afm lib/R/afm/agdo____.afm lib/R/afm/agw_____.afm lib/R/afm/agwo____.afm +lib/R/afm/b018012l.afm +lib/R/afm/b018015l.afm +lib/R/afm/b018032l.afm +lib/R/afm/b018035l.afm lib/R/afm/bkd_____.afm lib/R/afm/bkdi____.afm lib/R/afm/bkl_____.afm lib/R/afm/bkli____.afm +lib/R/afm/c059013l.afm +lib/R/afm/c059016l.afm +lib/R/afm/c059033l.afm +lib/R/afm/c059036l.afm lib/R/afm/cob_____.afm lib/R/afm/cobo____.afm lib/R/afm/com_____.afm @@ -19,31 +52,6 @@ lib/R/afm/hvnb____.afm lib/R/afm/hvnbo___.afm lib/R/afm/hvno____.afm lib/R/afm/hvo_____.afm -lib/R/afm/ncb_____.afm -lib/R/afm/ncbi____.afm -lib/R/afm/nci_____.afm -lib/R/afm/ncr_____.afm -lib/R/afm/pob_____.afm -lib/R/afm/pobi____.afm -lib/R/afm/poi_____.afm -lib/R/afm/por_____.afm -lib/R/afm/tib_____.afm -lib/R/afm/tibi____.afm -lib/R/afm/tii_____.afm -lib/R/afm/tir_____.afm -lib/R/afm/sy______.afm -lib/R/afm/a010013l.afm -lib/R/afm/a010015l.afm -lib/R/afm/a010033l.afm -lib/R/afm/a010035l.afm -lib/R/afm/b018012l.afm -lib/R/afm/b018015l.afm -lib/R/afm/b018032l.afm -lib/R/afm/b018035l.afm -lib/R/afm/n022003l.afm -lib/R/afm/n022004l.afm -lib/R/afm/n022023l.afm -lib/R/afm/n022024l.afm lib/R/afm/n019003l.afm lib/R/afm/n019004l.afm lib/R/afm/n019023l.afm @@ -52,60 +60,83 @@ lib/R/afm/n019043l.afm lib/R/afm/n019044l.afm lib/R/afm/n019063l.afm lib/R/afm/n019064l.afm -lib/R/afm/c059013l.afm 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lib/R/library/base/R-ex/file.access.R lib/R/library/base/R-ex/file.info.R lib/R/library/base/R-ex/file.show.R @@ -1740,13 +1146,13 @@ lib/R/library/base/R-ex/format.R lib/R/library/base/R-ex/format.info.R lib/R/library/base/R-ex/formatDL.R lib/R/library/base/R-ex/formatc.R -lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/formula.R lib/R/library/base/R-ex/fourfoldplot.R lib/R/library/base/R-ex/freeny.R lib/R/library/base/R-ex/ftable.R lib/R/library/base/R-ex/ftable.formula.R lib/R/library/base/R-ex/function.R +lib/R/library/base/R-ex/gc.R lib/R/library/base/R-ex/gc.time.R lib/R/library/base/R-ex/get.R lib/R/library/base/R-ex/getNativeSymbolInfo.R @@ -1756,6 +1162,7 @@ lib/R/library/base/R-ex/gl.R lib/R/library/base/R-ex/glm.R lib/R/library/base/R-ex/glm.control.R lib/R/library/base/R-ex/glm.summary.R +lib/R/library/base/R-ex/gnome.R lib/R/library/base/R-ex/gray.R lib/R/library/base/R-ex/grep.R lib/R/library/base/R-ex/grid.R @@ -1814,7 +1221,6 @@ lib/R/library/base/R-ex/lowess.R lib/R/library/base/R-ex/ls.R lib/R/library/base/R-ex/ls.diag.R lib/R/library/base/R-ex/lsfit.R -lib/R/library/base/R-ex/machine.R lib/R/library/base/R-ex/mad.R lib/R/library/base/R-ex/mahalanobis.R lib/R/library/base/R-ex/make.link.R @@ -1839,7 +1245,6 @@ lib/R/library/base/R-ex/merge.R lib/R/library/base/R-ex/methods.R lib/R/library/base/R-ex/missing.R lib/R/library/base/R-ex/mode.R -lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/model.extract.R lib/R/library/base/R-ex/model.frame.R lib/R/library/base/R-ex/model.matrix.R @@ -1847,11 +1252,13 @@ lib/R/library/base/R-ex/model.tables.R lib/R/library/base/R-ex/morley.R lib/R/library/base/R-ex/mosaicplot.R lib/R/library/base/R-ex/mtcars.R +lib/R/library/base/R-ex/mtext.R lib/R/library/base/R-ex/n2mfrow.R lib/R/library/base/R-ex/na.action.R lib/R/library/base/R-ex/na.fail.R lib/R/library/base/R-ex/name.R lib/R/library/base/R-ex/names.R +lib/R/library/base/R-ex/namespace.R lib/R/library/base/R-ex/nargs.R lib/R/library/base/R-ex/nchar.R lib/R/library/base/R-ex/nextn.R @@ -1861,6 +1268,7 @@ lib/R/library/base/R-ex/nlm.R lib/R/library/base/R-ex/noquote.R lib/R/library/base/R-ex/notyet.R lib/R/library/base/R-ex/nrow.R +lib/R/library/base/R-ex/nsl.R lib/R/library/base/R-ex/numeric.R lib/R/library/base/R-ex/object.size.R lib/R/library/base/R-ex/on.exit.R @@ -1885,7 +1293,7 @@ lib/R/library/base/R-ex/pdf.R lib/R/library/base/R-ex/persp.R lib/R/library/base/R-ex/phones.R lib/R/library/base/R-ex/pictex.R -lib/R/library/base/R-ex/piechart.R +lib/R/library/base/R-ex/pie.R lib/R/library/base/R-ex/plot.R lib/R/library/base/R-ex/plot.lm.R lib/R/library/base/R-ex/plot.table.R @@ -1898,6 +1306,7 @@ lib/R/library/base/R-ex/plotformula.R lib/R/library/base/R-ex/plothistogram.R lib/R/library/base/R-ex/plotmath.R lib/R/library/base/R-ex/pmatch.R +lib/R/library/base/R-ex/png.R lib/R/library/base/R-ex/points.R lib/R/library/base/R-ex/poly.R lib/R/library/base/R-ex/polygon.R @@ -1998,6 +1407,7 @@ 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lib/R/library/base/help/Rhome lib/R/library/base/help/Round +lib/R/library/base/help/Rprof +lib/R/library/base/help/SHLIB lib/R/library/base/help/SignRank +lib/R/library/base/help/Signals lib/R/library/base/help/Special lib/R/library/base/help/Startup lib/R/library/base/help/Syntax @@ -2797,6 +1632,7 @@ lib/R/library/base/help/abbreviate lib/R/library/base/help/abline lib/R/library/base/help/add1 lib/R/library/base/help/aggregate +lib/R/library/base/help/agrep lib/R/library/base/help/airmiles lib/R/library/base/help/airquality lib/R/library/base/help/alias @@ -2830,8 +1666,9 @@ lib/R/library/base/help/attr lib/R/library/base/help/attributes lib/R/library/base/help/autoload lib/R/library/base/help/ave -lib/R/library/base/help/axis.POSIXct +lib/R/library/base/help/axTicks lib/R/library/base/help/axis +lib/R/library/base/help/axis.POSIXct lib/R/library/base/help/backsolve lib/R/library/base/help/bandwidth lib/R/library/base/help/barplot @@ -2842,6 +1679,8 @@ lib/R/library/base/help/box lib/R/library/base/help/boxplot lib/R/library/base/help/boxplot.formula lib/R/library/base/help/boxplot.stats +lib/R/library/base/help/browseEnv +lib/R/library/base/help/browseURL lib/R/library/base/help/browser lib/R/library/base/help/bug.report lib/R/library/base/help/builtins @@ -2893,8 +1732,8 @@ lib/R/library/base/help/cov.wt lib/R/library/base/help/crossprod lib/R/library/base/help/cumsum lib/R/library/base/help/curve -lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/cut +lib/R/library/base/help/cut.POSIXt lib/R/library/base/help/data lib/R/library/base/help/data.class lib/R/library/base/help/data.frame @@ -2989,14 +1828,16 @@ lib/R/library/base/help/glm lib/R/library/base/help/glm.control lib/R/library/base/help/glm.summaries lib/R/library/base/help/glm.summary +lib/R/library/base/help/gnome lib/R/library/base/help/gray lib/R/library/base/help/grep lib/R/library/base/help/grid +lib/R/library/base/help/gtk lib/R/library/base/help/help lib/R/library/base/help/help.search lib/R/library/base/help/help.start -lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hist +lib/R/library/base/help/hist.POSIXt lib/R/library/base/help/hsv lib/R/library/base/help/identical lib/R/library/base/help/identify @@ -3048,8 +1889,8 @@ lib/R/library/base/help/locales lib/R/library/base/help/locator lib/R/library/base/help/logLik lib/R/library/base/help/logLik.glm -lib/R/library/base/help/logical lib/R/library/base/help/logLik.lm +lib/R/library/base/help/logical lib/R/library/base/help/loglin lib/R/library/base/help/longley lib/R/library/base/help/lower.tri @@ -3058,7 +1899,6 @@ lib/R/library/base/help/ls lib/R/library/base/help/ls.diag lib/R/library/base/help/ls.print lib/R/library/base/help/lsfit -lib/R/library/base/help/machine lib/R/library/base/help/mad lib/R/library/base/help/mahalanobis lib/R/library/base/help/make.link @@ -3099,6 +1939,7 @@ lib/R/library/base/help/na.fail lib/R/library/base/help/nafns lib/R/library/base/help/name lib/R/library/base/help/names +lib/R/library/base/help/namespace lib/R/library/base/help/naprint lib/R/library/base/help/nargs lib/R/library/base/help/nchar @@ -3110,6 +1951,7 @@ lib/R/library/base/help/nlm lib/R/library/base/help/noquote lib/R/library/base/help/notyet lib/R/library/base/help/nrow +lib/R/library/base/help/nsl lib/R/library/base/help/numeric lib/R/library/base/help/object.size lib/R/library/base/help/octmode @@ -3138,7 +1980,7 @@ lib/R/library/base/help/pdf lib/R/library/base/help/persp lib/R/library/base/help/phones lib/R/library/base/help/pictex -lib/R/library/base/help/piechart +lib/R/library/base/help/pie lib/R/library/base/help/plot lib/R/library/base/help/plot.density lib/R/library/base/help/plot.lm @@ -3152,6 +1994,7 @@ lib/R/library/base/help/plotformula lib/R/library/base/help/plothistogram lib/R/library/base/help/plotmath lib/R/library/base/help/pmatch +lib/R/library/base/help/png lib/R/library/base/help/points lib/R/library/base/help/poly lib/R/library/base/help/polygon @@ -3160,7 +2003,6 @@ lib/R/library/base/help/pos.to.env lib/R/library/base/help/postscript lib/R/library/base/help/power lib/R/library/base/help/ppoints -lib/R/library/base/help/qr lib/R/library/base/help/precip lib/R/library/base/help/predict lib/R/library/base/help/predict.glm @@ -3184,11 +2026,12 @@ lib/R/library/base/help/prop.table lib/R/library/base/help/pushBack lib/R/library/base/help/putenv lib/R/library/base/help/qqnorm +lib/R/library/base/help/qr lib/R/library/base/help/qraux lib/R/library/base/help/quakes lib/R/library/base/help/quantile +lib/R/library/base/help/quartz lib/R/library/base/help/quit -lib/R/library/base/help/rep lib/R/library/base/help/randu lib/R/library/base/help/range lib/R/library/base/help/rank @@ -3207,6 +2050,7 @@ lib/R/library/base/help/rect lib/R/library/base/help/reg.finalizer lib/R/library/base/help/relevel lib/R/library/base/help/remove.packages +lib/R/library/base/help/rep lib/R/library/base/help/replace lib/R/library/base/help/replications lib/R/library/base/help/reshape @@ -3217,9 +2061,9 @@ lib/R/library/base/help/rgb lib/R/library/base/help/rivers lib/R/library/base/help/rle lib/R/library/base/help/rm +lib/R/library/base/help/round.POSIXt lib/R/library/base/help/row lib/R/library/base/help/rowsum -lib/R/library/base/help/round.POSIXt lib/R/library/base/help/rug lib/R/library/base/help/sample lib/R/library/base/help/save @@ -3233,8 +2077,8 @@ lib/R/library/base/help/se.contrast lib/R/library/base/help/search lib/R/library/base/help/seek lib/R/library/base/help/segments -lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/seq +lib/R/library/base/help/seq.POSIXt lib/R/library/base/help/sequence lib/R/library/base/help/sets lib/R/library/base/help/showConnections @@ -3273,6 +2117,7 @@ lib/R/library/base/help/sum lib/R/library/base/help/summary lib/R/library/base/help/summary.aov lib/R/library/base/help/summary.manova +lib/R/library/base/help/summaryRprof lib/R/library/base/help/sunflowerplot lib/R/library/base/help/sunspots lib/R/library/base/help/svd @@ -3283,6 +2128,7 @@ lib/R/library/base/help/symbols lib/R/library/base/help/symnum lib/R/library/base/help/sys.parent lib/R/library/base/help/sys.source +lib/R/library/base/help/system lib/R/library/base/help/system.file lib/R/library/base/help/system.time lib/R/library/base/help/t @@ -3302,13 +2148,13 @@ lib/R/library/base/help/textconnections lib/R/library/base/help/time lib/R/library/base/help/title lib/R/library/base/help/toString -lib/R/library/base/help/try lib/R/library/base/help/trace lib/R/library/base/help/traceback lib/R/library/base/help/transform lib/R/library/base/help/trees -lib/R/library/base/help/ts-methods +lib/R/library/base/help/try lib/R/library/base/help/ts +lib/R/library/base/help/ts-methods lib/R/library/base/help/tsp lib/R/library/base/help/type.convert lib/R/library/base/help/typeof @@ -3323,6 +2169,7 @@ lib/R/library/base/help/update.formula lib/R/library/base/help/update.packages lib/R/library/base/help/url.show lib/R/library/base/help/uspop +lib/R/library/base/help/vcov lib/R/library/base/help/vector lib/R/library/base/help/volcano lib/R/library/base/help/warning @@ -3330,15 +2177,16 @@ lib/R/library/base/help/warnings lib/R/library/base/help/warpbreaks lib/R/library/base/help/weekday.POSIXt lib/R/library/base/help/weighted.mean +lib/R/library/base/help/weighted.residuals lib/R/library/base/help/which lib/R/library/base/help/which.min -lib/R/library/base/help/weighted.residuals lib/R/library/base/help/window lib/R/library/base/help/with lib/R/library/base/help/women lib/R/library/base/help/write lib/R/library/base/help/write.table lib/R/library/base/help/writeLines +lib/R/library/base/help/x11 lib/R/library/base/help/xfig lib/R/library/base/help/xtabs lib/R/library/base/help/xy.coords @@ -3349,91 +2197,4861 @@ lib/R/library/base/help/zMethods lib/R/library/base/help/zScript lib/R/library/base/help/zcbind.ts lib/R/library/base/help/zip.file.extract 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lib/R/library/survival/man +@dirrm lib/R/library/survival/libs +@dirrm lib/R/library/survival/latex +@dirrm lib/R/library/survival/html +@dirrm lib/R/library/survival/help +@dirrm lib/R/library/survival/data +@dirrm lib/R/library/survival/R-ex +@dirrm lib/R/library/survival/R +@dirrm lib/R/library/survival @dirrm lib/R/library/stepfun/man @dirrm lib/R/library/stepfun/latex @dirrm lib/R/library/stepfun/html @@ -3913,6 +7796,32 @@ lib/R/THANKS @dirrm lib/R/library/splines/R-ex @dirrm lib/R/library/splines/R @dirrm lib/R/library/splines +@dirrm lib/R/library/spatial/man +@dirrm lib/R/library/spatial/libs +@dirrm lib/R/library/spatial/latex +@dirrm lib/R/library/spatial/html +@dirrm lib/R/library/spatial/help +@dirrm lib/R/library/spatial/data +@dirrm lib/R/library/spatial/R-ex +@dirrm lib/R/library/spatial/R +@dirrm lib/R/library/spatial +@dirrm lib/R/library/rpart/man +@dirrm lib/R/library/rpart/libs +@dirrm lib/R/library/rpart/latex +@dirrm lib/R/library/rpart/html +@dirrm 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