From 36d8a857f9b19cf3b5fa563debfb87670ea2ec22 Mon Sep 17 00:00:00 2001
From: Nicola Vitale <nivit@FreeBSD.org>
Date: Wed, 15 Dec 2010 16:48:09 +0000
Subject: [PATCH] ParMGridGen-1.0 is a highly optimized serial and parallel
 library for obtaining a sequence of successive coarse grids that are well
 suited for geometric multigrid methods. The quality of the elements of the
 coarse grids is optimized using a multilevel framework. The parallel library
 is based on MPI and is portable to a wide range of architectures.

WWW: http://www.mgnet.org/mgnet-codes-parmgridgen.html

PR:		ports/152506
Submitted by:	Stas Timokhin <devel at stasyan.com>
---
 math/Makefile                                 |  1 +
 math/parmgridgen/Makefile                     | 41 ++++++++++++++++
 math/parmgridgen/distinfo                     |  2 +
 .../files/patch-MGridGen_IMlib_IMlib.h        | 11 +++++
 .../files/patch-MGridGen_Lib_mgridgen.h       | 11 +++++
 math/parmgridgen/files/patch-Makefile.in      | 49 +++++++++++++++++++
 ...MGridGen_IMParMetis_ParMETISLib_parmetis.h | 11 +++++
 .../patch-ParMGridGen_ParLib_parmgridgen.h    | 11 +++++
 math/parmgridgen/pkg-descr                    |  9 ++++
 math/parmgridgen/pkg-plist                    |  7 +++
 10 files changed, 153 insertions(+)
 create mode 100644 math/parmgridgen/Makefile
 create mode 100644 math/parmgridgen/distinfo
 create mode 100644 math/parmgridgen/files/patch-MGridGen_IMlib_IMlib.h
 create mode 100644 math/parmgridgen/files/patch-MGridGen_Lib_mgridgen.h
 create mode 100644 math/parmgridgen/files/patch-Makefile.in
 create mode 100644 math/parmgridgen/files/patch-ParMGridGen_IMParMetis_ParMETISLib_parmetis.h
 create mode 100644 math/parmgridgen/files/patch-ParMGridGen_ParLib_parmgridgen.h
 create mode 100644 math/parmgridgen/pkg-descr
 create mode 100644 math/parmgridgen/pkg-plist

diff --git a/math/Makefile b/math/Makefile
index adf1d8b6435e..1e49e0f44d98 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -425,6 +425,7 @@
     SUBDIR += p5-bignum
     SUBDIR += pari
     SUBDIR += parmetis
+    SUBDIR += parmgridgen
     SUBDIR += pear-Math_Combinatorics
     SUBDIR += pecl-big_int
     SUBDIR += pecl-bitset
diff --git a/math/parmgridgen/Makefile b/math/parmgridgen/Makefile
new file mode 100644
index 000000000000..3adc79559425
--- /dev/null
+++ b/math/parmgridgen/Makefile
@@ -0,0 +1,41 @@
+# New ports collection makefile for: math/parmgirdgen
+# Date created:		22 Nov 2010
+# Whom:			Stas Timokhin <devel@stasyan.com>
+#
+# $FreeBSD$
+#
+
+PORTNAME=	parmgridgen
+PORTVERSION=	1.0
+CATEGORIES=	math science
+MASTER_SITES=	http://www.mgnet.org/mgnet/Codes/parmgridgen/
+DISTNAME=	ParMGridGen-${PORTVERSION}
+
+MAINTAINER=	devel@stasyan.com
+COMMENT=	Library for obtaining a sequence of successive coarse grids
+
+ALL_TARGET=	parallel
+
+LIB_DEPENDS+=	mpi.0:${PORTSDIR}/net/openmpi
+USE_GMAKE=	yes
+
+post-patch:
+#respect CFLAGS
+.		for f in IMlib Lib Programs
+		    @${REINPLACE_CMD} 's|CFLAGS =|CFLAGS+=|g' ${WRKSRC}/MGridGen/${f}/Makefile
+.		endfor
+.		for f in IMParMetis-2.0 ParLib Programs
+		    @${REINPLACE_CMD} 's|CFLAGS =|CFLAGS+=|g' ${WRKSRC}/ParMGridGen/${f}/Makefile
+.		endfor
+do-install:
+		${INSTALL_PROGRAM} ${WRKSRC}/mgridgen ${PREFIX}/bin/mgridgen
+		${INSTALL_PROGRAM} ${WRKSRC}/parmgridgen ${PREFIX}/bin/parmgridgen
+		${INSTALL_PROGRAM} ${WRKSRC}/libmgrid.a ${PREFIX}/lib/libmgrid.a
+		${INSTALL_PROGRAM} ${WRKSRC}/libparmgrid.a ${PREFIX}/lib/libparmgrid.a
+		${INSTALL_DATA} ${WRKSRC}/mgridgen.h ${PREFIX}/include/mgridgen.h
+.if !defined(NOPORTDOCS)
+		${MKDIR} ${DOCSDIR}
+		${INSTALL_DATA} ${WRKSRC}/README ${DOCSDIR}/README
+.endif
+
+.include <bsd.port.mk>
diff --git a/math/parmgridgen/distinfo b/math/parmgridgen/distinfo
new file mode 100644
index 000000000000..3b17391d0034
--- /dev/null
+++ b/math/parmgridgen/distinfo
@@ -0,0 +1,2 @@
+SHA256 (ParMGridGen-1.0.tar.gz) = 62cdb6e48cfc59124e5d5d360c2841e0fc2feecafe65bda110b74e942740b395
+SIZE (ParMGridGen-1.0.tar.gz) = 2623528
diff --git a/math/parmgridgen/files/patch-MGridGen_IMlib_IMlib.h b/math/parmgridgen/files/patch-MGridGen_IMlib_IMlib.h
new file mode 100644
index 000000000000..576bd5bd5204
--- /dev/null
+++ b/math/parmgridgen/files/patch-MGridGen_IMlib_IMlib.h
@@ -0,0 +1,11 @@
+--- MGridGen/IMlib/IMlib.h.orig	2010-02-24 15:22:46.000000000 +0600
++++ MGridGen/IMlib/IMlib.h	2010-02-24 15:22:57.000000000 +0600
+@@ -43,7 +43,7 @@
+ #ifdef DMALLOC
+ #include <dmalloc.h>
+ #else
+-#include <malloc.h>
++#include <stdlib.h>
+ #endif
+ 
+ /*************************************************************************
diff --git a/math/parmgridgen/files/patch-MGridGen_Lib_mgridgen.h b/math/parmgridgen/files/patch-MGridGen_Lib_mgridgen.h
new file mode 100644
index 000000000000..d1e67fdfe945
--- /dev/null
+++ b/math/parmgridgen/files/patch-MGridGen_Lib_mgridgen.h
@@ -0,0 +1,11 @@
+--- MGridGen/Lib/mgridgen.h.orig	2010-02-24 15:30:01.000000000 +0600
++++ MGridGen/Lib/mgridgen.h	2010-02-24 15:30:09.000000000 +0600
+@@ -26,7 +26,7 @@
+ #ifdef DMALLOC
+ #include <dmalloc.h>
+ #else
+-#include <malloc.h>
++#include <stdlib.h>
+ #endif
+ 
+ #include "defs.h"
diff --git a/math/parmgridgen/files/patch-Makefile.in b/math/parmgridgen/files/patch-Makefile.in
new file mode 100644
index 000000000000..c5ec96f0048a
--- /dev/null
+++ b/math/parmgridgen/files/patch-Makefile.in
@@ -0,0 +1,49 @@
+--- Makefile.in.orig	2001-12-05 06:30:33.000000000 +0600
++++ Makefile.in	2010-12-15 09:45:04.000000000 +0600
+@@ -9,17 +9,17 @@
+ PARCC = cc
+ 
+ # What optimization level to use
+-OPTFLAGS = -O3
++OPTFLAGS = 
+ 
+ # What options to be used by the compiler
+-COPTIONS = 
++COPTIONS = ${PTHREAD_CFLAGS}
+ 
+ # Which loader to use
+ LD = cc
+ PARLD = cc
+ 
+ # What options to be used by the loader
+-LDOPTIONS = -O3
++LDOPTIONS = 
+ 
+ # Where to put the executable 
+ BINDIR = ../..
+@@ -29,18 +29,21 @@
+ IMLIBDIR = ../../MGridGen/IMlib
+ 
+ # Include directories for the compiler
+-INCDIR = 
++INCDIR = -I${LOCALBASE}/include \
++	-I${LOCALBASE}/mpi/openmpi/include
+ 
+ # In which directories to look for any additional libraries
+ LIBDIR = -L../.. \
+-         -L/usr/lib32/
++         -L/usr/lib/ \
++         -L/${LOCALBASE}/lib/ \
++         -L/${LOCALBASE}/mpi/openmpi/lib 
+ 
+ # Set some flags
+ DEBUGFLAGS =
+ 
+ # What additional libraries to link the programs with (eg., -lmpi)
+-LIBS = -lmgrid -lm
+-PARLIBS = -lparmgrid -lmgrid -lmpi -lm
++LIBS = -lmgrid -lm -pthread
++PARLIBS = -lparmgrid -lmgrid -lmpi -lm -pthread
+ 
+ 
+ # What archiving to use
diff --git a/math/parmgridgen/files/patch-ParMGridGen_IMParMetis_ParMETISLib_parmetis.h b/math/parmgridgen/files/patch-ParMGridGen_IMParMetis_ParMETISLib_parmetis.h
new file mode 100644
index 000000000000..500fb26a7caf
--- /dev/null
+++ b/math/parmgridgen/files/patch-ParMGridGen_IMParMetis_ParMETISLib_parmetis.h
@@ -0,0 +1,11 @@
+--- ParMGridGen/IMParMetis-2.0/ParMETISLib/parmetis.h.orig	2010-02-24 15:21:20.000000000 +0600
++++ ParMGridGen/IMParMetis-2.0/ParMETISLib/parmetis.h	2010-02-24 15:21:40.000000000 +0600
+@@ -21,7 +21,7 @@
+ #ifdef DMALLOC
+ #include <dmalloc.h>
+ #else
+-#include <malloc.h>
++#include <stdlib.h>
+ #endif
+ 
+ #include "rename.h"
diff --git a/math/parmgridgen/files/patch-ParMGridGen_ParLib_parmgridgen.h b/math/parmgridgen/files/patch-ParMGridGen_ParLib_parmgridgen.h
new file mode 100644
index 000000000000..0adafd1ca756
--- /dev/null
+++ b/math/parmgridgen/files/patch-ParMGridGen_ParLib_parmgridgen.h
@@ -0,0 +1,11 @@
+--- ParMGridGen/ParLib/parmgridgen.h.orig	2010-02-24 15:21:58.000000000 +0600
++++ ParMGridGen/ParLib/parmgridgen.h	2010-02-24 15:22:03.000000000 +0600
+@@ -21,7 +21,7 @@
+ #ifdef DMALLOC
+ #include <dmalloc.h>
+ #else
+-#include <malloc.h>
++#include <stdlib.h>
+ #endif
+ 
+ #include "IMlib.h"
diff --git a/math/parmgridgen/pkg-descr b/math/parmgridgen/pkg-descr
new file mode 100644
index 000000000000..1ab585172035
--- /dev/null
+++ b/math/parmgridgen/pkg-descr
@@ -0,0 +1,9 @@
+ParMGridGen-1.0 is a highly optimized serial and parallel library 
+for obtaining a sequence of successive coarse grids that are well suited 
+for geometric multigrid methods. 
+The quality of the elements of the coarse grids is optimized using a 
+multilevel framework.
+The parallel library is based on MPI and is portable to 
+a wide range of architectures.
+
+WWW: http://www.mgnet.org/mgnet-codes-parmgridgen.html
diff --git a/math/parmgridgen/pkg-plist b/math/parmgridgen/pkg-plist
new file mode 100644
index 000000000000..99f73031ae04
--- /dev/null
+++ b/math/parmgridgen/pkg-plist
@@ -0,0 +1,7 @@
+bin/mgridgen
+bin/parmgridgen
+lib/libmgrid.a
+lib/libparmgrid.a
+include/mgridgen.h
+%%PORTDOCS%%%%DOCSDIR%%/README
+%%PORTDOCS%%@dirrm %%DOCSDIR%%