From a0f669db2a220a8e318904e02d9fc003fa268adc Mon Sep 17 00:00:00 2001
From: Martin Wilke <miwi@FreeBSD.org>
Date: Thu, 27 Feb 2014 08:58:36 +0000
Subject: [PATCH] - Update to 5.0.7

PR:		185942
Submitted by:	ports fury
---
 biology/molden/Makefile | 41 +++++++++++++++++++----------------------
 biology/molden/distinfo |  4 ++--
 2 files changed, 21 insertions(+), 24 deletions(-)

diff --git a/biology/molden/Makefile b/biology/molden/Makefile
index bb2eaea4f1fc..61ba6a50a6ce 100644
--- a/biology/molden/Makefile
+++ b/biology/molden/Makefile
@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	molden
-PORTVERSION=	5.0.6
-PORTREVISION=	1
+PORTVERSION=	5.0.7
 PORTEPOCH=	1
 CATEGORIES=	biology
 MASTER_SITES=	ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/
@@ -14,25 +13,25 @@ COMMENT=	Display molecular orbitals and electron densities in 2D and 3D
 
 RESTRICTED=	free for academic, non profit usage; do not re-distribute source and executable.
 
-OPTIONS_DEFINE=	DATA DOCS
-OPTIONS_DEFAULT=DATA
-
 WRKSRC=		${WRKDIR}/${PORTNAME}${PORTVERSION:R}
 
 USES=		fortran gmake
-USE_XORG=	x11 xproto
+USE_XORG=	x11
 USE_GL=		glu
 MAKEFILE=	makefile
 MAKE_JOBS_UNSAFE=yes
 
 CFLAGS+=	-D${OPSYS:U} -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 \
-		-I/usr/local/include -Wno-return-type
+		-I${LOCALBASE}/include -Wno-return-type
 
 PORTDOCS=	*
 PORTDATA=	*
 PLIST_FILES=	bin/ambfor bin/gmolden bin/molden bin/surf
 
-.include <bsd.port.options.mk>
+PORTSCOUT=	limit:^5\.0\.
+
+OPTIONS_DEFINE=		DATA DOCS
+OPTIONS_DEFAULT=	DATA
 
 post-patch:
 	@${REINPLACE_CMD} -e \
@@ -50,19 +49,17 @@ post-configure:
 	@${ECHO_MSG} "********************"
 
 do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/molden ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_PROGRAM} ${WRKSRC}/gmolden ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_PROGRAM} ${WRKSRC}/ambfor/ambfor ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_PROGRAM} ${WRKSRC}/surf/surf ${STAGEDIR}${PREFIX}/bin
-.if ${PORT_OPTIONS:MDATA}
-	${MKDIR} ${STAGEDIR}${DATADIR}/test
-	${INSTALL_DATA} ${WRKSRC}/test/* ${STAGEDIR}${DATADIR}/test
-	${MKDIR} ${STAGEDIR}${DATADIR}/utils
-	${INSTALL_DATA} ${WRKSRC}/utils/* ${STAGEDIR}${DATADIR}/utils
-.endif
-.if ${PORT_OPTIONS:MDOCS}
-	${MKDIR} ${STAGEDIR}${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/doc/* ${STAGEDIR}${DOCSDIR}
-.endif
+.for i in molden gmolden
+	(cd ${WRKSRC} && ${INSTALL_PROGRAM} ${i} ${STAGEDIR}${PREFIX}/bin)
+.endfor
+.for i in ambfor surf
+	(cd ${WRKSRC}/${i} && ${INSTALL_PROGRAM} ${i} ${STAGEDIR}/${PREFIX}/bin)
+.endfor
+	@${MKDIR} ${STAGEDIR}${DATADIR}/test
+	(cd ${WRKSRC}/test && ${INSTALL_DATA} * ${STAGEDIR}${DATADIR}/test)
+	@${MKDIR} ${STAGEDIR}${DATADIR}/utils
+	(cd ${WRKSRC}/utils &&  ${INSTALL_DATA} * ${STAGEDIR}${DATADIR}/utils)
+	@${MKDIR} ${STAGEDIR}${DOCSDIR}
+	(cd ${WRKSRC}/doc && ${INSTALL_DATA} * ${STAGEDIR}${DOCSDIR})
 
 .include <bsd.port.mk>
diff --git a/biology/molden/distinfo b/biology/molden/distinfo
index a4adcf24c6c6..32892d7bfcaa 100644
--- a/biology/molden/distinfo
+++ b/biology/molden/distinfo
@@ -1,2 +1,2 @@
-SHA256 (molden5.0.6.tar.gz) = b22339129140095fdb3f2a5b9b11518e1bb81cc0fd02a627aa44575294b064cf
-SIZE (molden5.0.6.tar.gz) = 3084150
+SHA256 (molden5.0.7.tar.gz) = e46bd783acdb27277731afd0693681dab91f0af4f281be2ce2d83777038ba62e
+SIZE (molden5.0.7.tar.gz) = 3076093