diff --git a/math/Makefile b/math/Makefile index 9223b326ff1a..9368da6a2792 100644 --- a/math/Makefile +++ b/math/Makefile @@ -227,6 +227,7 @@ SUBDIR += dune-alugrid SUBDIR += dune-common SUBDIR += dune-curvedgeometry + SUBDIR += dune-fem SUBDIR += dune-functions SUBDIR += dune-geometry SUBDIR += dune-grid diff --git a/math/dune-fem/Makefile b/math/dune-fem/Makefile new file mode 100644 index 000000000000..0f9f80ff2fde --- /dev/null +++ b/math/dune-fem/Makefile @@ -0,0 +1,55 @@ +# $FreeBSD$ + +PORTNAME= dune-fem +DISTVERSION= 2.6.0rc3 +CATEGORIES= math + +MAINTAINER= yuri@FreeBSD.org +COMMENT= DUNE framework: Finite Element Methods, Finite Volume Methods, etc + +LICENSE= GPLv3 +LICENSE_FILE= ${WRKSRC}/LICENSE.md + +BUILD_DEPENDS= arpack++>0:math/arpack++ \ + dune-istl>=2.6:math/dune-istl \ + dune-localfunctions>=2.6:math/dune-localfunctions \ + dune-spgrid>0:math/dune-spgrid \ + vc>0:devel/vc \ + ${LOCALBASE}/mpi/openmpi/lib/libmpi.so:net/openmpi +LIB_DEPENDS= libarpack.so:math/arpack-ng \ + libdunealugrid.so:math/dune-alugrid \ + libdunecommon.so:math/dune-common \ + libdunegeometry.so:math/dune-geometry \ + libdunegrid.so:math/dune-grid \ + libugS2.so:math/dune-uggrid \ + libmetis.so:math/metis \ + libopenblas.so:math/openblas \ + libtbb.so:devel/tbb +RUN_DEPENDS= dune-istl>=2.6:math/dune-istl \ + dune-localfunctions>=2.6:math/dune-localfunctions \ + dune-spgrid>0:math/dune-spgrid \ + ${LOCALBASE}/mpi/openmpi/lib/libmpi.so:net/openmpi + +USES= cmake compiler:c++17-lang eigen:3 fortran pkgconfig +USE_GITLAB= yes +USE_LDCONFIG= yes + +GL_SITE= https://gitlab.dune-project.org +GL_ACCOUNT= dune-fem +GL_COMMIT= d1b565ab01047e44508c23bb9ba3e3b4491cd8a7 + +CMAKE_ON= BUILD_SHARED_LIBS + +OPTIONS_DEFINE= DOCS + +DOCS_CMAKE_BOOL= FREEBSD_INSTALL_DOCS +DOCS_BUILD_DEPENDS= doxygen:devel/doxygen \ + sphinx-build:textproc/py-sphinx + +PORTDOCS= * + +post-install: # https://gitlab.dune-project.org/dune-fem/dune-fem/-/issues/111 + ${RM} ${STAGEDIR}${PREFIX}/share/dune/cmake/modules/FindPThreads.cmake + ${RM} ${STAGEDIR}${PREFIX}/share/dune/cmake/modules/FindSIONlib.cmake + +.include diff --git a/math/dune-fem/distinfo b/math/dune-fem/distinfo new file mode 100644 index 000000000000..95ed78bf1298 --- /dev/null +++ b/math/dune-fem/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1610838614 +SHA256 (dune-fem-dune-fem-d1b565ab01047e44508c23bb9ba3e3b4491cd8a7_GL0.tar.gz) = 609f5ba4927baa228be52e37a9a8147ac6f23cd64722912a5246925ec3d64a64 +SIZE (dune-fem-dune-fem-d1b565ab01047e44508c23bb9ba3e3b4491cd8a7_GL0.tar.gz) = 1955688 diff --git a/math/dune-fem/files/patch-CMakeLists.txt b/math/dune-fem/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..ee31aa6e1227 --- /dev/null +++ b/math/dune-fem/files/patch-CMakeLists.txt @@ -0,0 +1,14 @@ +--- CMakeLists.txt.orig 2018-08-20 20:54:13 UTC ++++ CMakeLists.txt +@@ -27,7 +27,10 @@ dune_project() + include(DuneMPI) + + #add sub_directories +-dune_add_subdirs(dune lib doc cmake/modules) ++dune_add_subdirs(dune lib cmake/modules) ++if (FREEBSD_INSTALL_DOCS) ++dune_add_subdirs(doc) ++endif() + + # finalize the dune project, e.g. generating config.h etc. + finalize_dune_project(GENERATE_CONFIG_H_CMAKE) diff --git a/math/dune-fem/pkg-descr b/math/dune-fem/pkg-descr new file mode 100644 index 000000000000..77ffaff15ea0 --- /dev/null +++ b/math/dune-fem/pkg-descr @@ -0,0 +1,8 @@ +dune-fem is a module of the DUNE Numerics framework for solving partial +differential equations (PDEs) with grid-based methods. + +dune-fem is a Distributed and Unified Numerics Environment module which defines +interfaces for implementing discretization methods like Finite Element Methods +(FEM) and Finite Volume Methods (FV) and Discontinuous Galerkin Methods (DG). + +WWW: https://www.dune-project.org/ diff --git a/math/dune-fem/pkg-plist b/math/dune-fem/pkg-plist new file mode 100644 index 000000000000..41405f271b4b --- /dev/null +++ b/math/dune-fem/pkg-plist @@ -0,0 +1,534 @@ +include/dune/fem/common/bindguard.hh +include/dune/fem/common/coordinate.hh +include/dune/fem/common/explicitfieldvector.hh +include/dune/fem/common/fmatrixcol.hh +include/dune/fem/common/forloop.hh +include/dune/fem/common/geometrytypemap.hh +include/dune/fem/common/hybrid.hh +include/dune/fem/common/localcontribution.hh +include/dune/fem/common/memory.hh +include/dune/fem/common/referencevector.hh +include/dune/fem/common/stackallocator.hh +include/dune/fem/common/tupletypetraits.hh +include/dune/fem/common/tupleutility.hh +include/dune/fem/common/typeindexedtuple.hh +include/dune/fem/common/utility.hh +include/dune/fem/function/adaptivefunction.hh +include/dune/fem/function/adaptivefunction/adaptivefunction.hh +include/dune/fem/function/blockvectordiscretefunction.hh +include/dune/fem/function/blockvectordiscretefunction/blockvectordiscretefunction.hh +include/dune/fem/function/blockvectorfunction.hh +include/dune/fem/function/blockvectorfunction/blockvectorfunction.hh +include/dune/fem/function/blockvectorfunction/declaration.hh +include/dune/fem/function/blockvectors/defaultblockvectors.hh +include/dune/fem/function/blockvectors/referenceblockvector.hh +include/dune/fem/function/combinedfunction.hh +include/dune/fem/function/combinedfunction/combinedfunction.hh +include/dune/fem/function/common/common.hh +include/dune/fem/function/common/discretefunction.hh +include/dune/fem/function/common/discretefunction_inline.hh +include/dune/fem/function/common/dofblock.hh +include/dune/fem/function/common/dofiterator.hh +include/dune/fem/function/common/function.hh +include/dune/fem/function/common/functionset.hh +include/dune/fem/function/common/functor.hh +include/dune/fem/function/common/gridfunctionadapter.hh +include/dune/fem/function/common/instationary.hh +include/dune/fem/function/common/localcontribution.hh +include/dune/fem/function/common/localfunctionadapter.hh +include/dune/fem/function/common/rangegenerators.hh +include/dune/fem/function/common/scalarproducts.hh +include/dune/fem/function/hierarchical.hh +include/dune/fem/function/hierarchical/dofvector.hh +include/dune/fem/function/hierarchical/function.hh +include/dune/fem/function/localfunction/average.hh +include/dune/fem/function/localfunction/bindable.hh +include/dune/fem/function/localfunction/const.hh +include/dune/fem/function/localfunction/converter.hh +include/dune/fem/function/localfunction/localfunction.hh +include/dune/fem/function/localfunction/localfunctionset.hh +include/dune/fem/function/localfunction/localfunctionsetadapter.hh +include/dune/fem/function/localfunction/mutable.hh +include/dune/fem/function/localfunction/temporary.hh +include/dune/fem/function/petscdiscretefunction.hh +include/dune/fem/function/petscdiscretefunction/petscdiscretefunction.hh +include/dune/fem/function/subfunction.hh +include/dune/fem/function/tuplediscretefunction.hh +include/dune/fem/function/tuplediscretefunction/discretefunction.hh +include/dune/fem/function/tuplediscretefunction/dofvector.hh +include/dune/fem/function/tuplediscretefunction/functor.hh +include/dune/fem/function/tuplediscretefunction/scalarproducts.hh +include/dune/fem/function/vectorfunction.hh +include/dune/fem/function/vectorfunction/managedvectorfunction.hh +include/dune/fem/function/vectorfunction/vectorfunction.hh +include/dune/fem/gridpart/adaptiveleafgridpart.hh +include/dune/fem/gridpart/adaptiveleafindexset.hh +include/dune/fem/gridpart/codimindexset.hh +include/dune/fem/gridpart/common/capabilities.hh +include/dune/fem/gridpart/common/deaditerator.hh +include/dune/fem/gridpart/common/defaultgridpartentity.hh +include/dune/fem/gridpart/common/entitysearch.hh +include/dune/fem/gridpart/common/gridpart.hh +include/dune/fem/gridpart/common/gridpart2gridview.hh +include/dune/fem/gridpart/common/gridview2gridpart.hh +include/dune/fem/gridpart/common/indexset.hh +include/dune/fem/gridpart/common/metatwistutility.hh +include/dune/fem/gridpart/common/nonadaptiveindexset.hh +include/dune/fem/gridpart/common/persistentindexset.hh +include/dune/fem/gridpart/common/policies.hh +include/dune/fem/gridpart/filter.hh +include/dune/fem/gridpart/filter/basicfilterwrapper.hh +include/dune/fem/gridpart/filter/domainfilter.hh +include/dune/fem/gridpart/filter/filter.hh +include/dune/fem/gridpart/filter/inversefilter.hh +include/dune/fem/gridpart/filter/radialfilter.hh +include/dune/fem/gridpart/filter/threadfilter.hh +include/dune/fem/gridpart/filter/voidfilter.hh +include/dune/fem/gridpart/filteredgridpart.hh +include/dune/fem/gridpart/filteredgridpart/capabilities.hh +include/dune/fem/gridpart/filteredgridpart/datahandle.hh +include/dune/fem/gridpart/filteredgridpart/intersection.hh +include/dune/fem/gridpart/filteredgridpart/intersectioniterator.hh +include/dune/fem/gridpart/filteredgridpart/iterator.hh +include/dune/fem/gridpart/geogridpart.hh +include/dune/fem/gridpart/geogridpart/capabilities.hh +include/dune/fem/gridpart/geogridpart/cornerstorage.hh +include/dune/fem/gridpart/geogridpart/datahandle.hh +include/dune/fem/gridpart/geogridpart/entity.hh +include/dune/fem/gridpart/geogridpart/geometry.hh +include/dune/fem/gridpart/geogridpart/intersection.hh +include/dune/fem/gridpart/geogridpart/intersectioniterator.hh +include/dune/fem/gridpart/idgridpart.hh +include/dune/fem/gridpart/idgridpart/capabilities.hh +include/dune/fem/gridpart/idgridpart/datahandle.hh +include/dune/fem/gridpart/idgridpart/entity.hh +include/dune/fem/gridpart/idgridpart/geometry.hh +include/dune/fem/gridpart/idgridpart/indexset.hh +include/dune/fem/gridpart/idgridpart/intersection.hh +include/dune/fem/gridpart/idgridpart/intersectioniterator.hh +include/dune/fem/gridpart/idgridpart/iterator.hh +include/dune/fem/gridpart/leafgridpart.hh +include/dune/fem/gridpart/levelgridpart.hh +include/dune/fem/io/file/asciiparser.hh +include/dune/fem/io/file/dataoutput.hh +include/dune/fem/io/file/datawriter.hh +include/dune/fem/io/file/iointerface.hh +include/dune/fem/io/file/iolock.hh +include/dune/fem/io/file/iotuple.hh +include/dune/fem/io/file/latextablewriter.hh +include/dune/fem/io/file/persistencemanager.hh +include/dune/fem/io/file/vtkio.hh +include/dune/fem/io/io.hh +include/dune/fem/io/parameter.hh +include/dune/fem/io/parameter/container.hh +include/dune/fem/io/parameter/exceptions.hh +include/dune/fem/io/parameter/parametertree.hh +include/dune/fem/io/parameter/parser.hh +include/dune/fem/io/parameter/reader.hh +include/dune/fem/io/streams/asciistreams.hh +include/dune/fem/io/streams/binarystreams.hh +include/dune/fem/io/streams/sionlibstreams.hh +include/dune/fem/io/streams/standardstreams.hh +include/dune/fem/io/streams/streams.hh +include/dune/fem/io/streams/streams_inline.hh +include/dune/fem/io/streams/tuples.hh +include/dune/fem/io/streams/virtualstreams.hh +include/dune/fem/io/streams/xdrstreams.hh +include/dune/fem/io/visual/grape/datadisp/dataconvert.cc +include/dune/fem/io/visual/grape/datadisp/datadisp.cc +include/dune/fem/io/visual/grape/datadisp/errordisplay.hh +include/dune/fem/io/visual/grape/datadisp/grcommon.hh +include/dune/fem/io/visual/grape/datadisp/printhelp.cc +include/dune/fem/io/visual/grape/datadisp/programtemplate.cc +include/dune/fem/io/visual/grape/datadisp/readioparams.cc +include/dune/fem/io/visual/grape/datadisp/readiotupledata.cc +include/dune/fem/io/visual/grape/datadisp/readtupledata.cc +include/dune/fem/misc/alugridwriter.hh +include/dune/fem/misc/bartonnackmaninterface.hh +include/dune/fem/misc/boundaryidprovider.hh +include/dune/fem/misc/capabilities.hh +include/dune/fem/misc/checkgeomaffinity.hh +include/dune/fem/misc/compatibility.hh +include/dune/fem/misc/debug.hh +include/dune/fem/misc/domainintegral.hh +include/dune/fem/misc/double.hh +include/dune/fem/misc/femeoc.hh +include/dune/fem/misc/femeoctable.hh +include/dune/fem/misc/femtimer.hh +include/dune/fem/misc/fieldmatrixhelper.hh +include/dune/fem/misc/flops.hh +include/dune/fem/misc/fmatrixconverter.hh +include/dune/fem/misc/functor.hh +include/dune/fem/misc/griddeclaration.hh +include/dune/fem/misc/gridname.hh +include/dune/fem/misc/gridobjectstreams.hh +include/dune/fem/misc/gridsolution.hh +include/dune/fem/misc/gridwidth.hh +include/dune/fem/misc/h1norm.hh +include/dune/fem/misc/l1norm.hh +include/dune/fem/misc/l2norm.hh +include/dune/fem/misc/linesegmentsampler.hh +include/dune/fem/misc/lpnorm.hh +include/dune/fem/misc/mapgeomtype.hh +include/dune/fem/misc/metaprogramming.hh +include/dune/fem/misc/mpimanager.hh +include/dune/fem/misc/nonconformitylevel.hh +include/dune/fem/misc/petsc/petsccommon.hh +include/dune/fem/misc/petsc/petscdofblock.hh +include/dune/fem/misc/petsc/petscvector.hh +include/dune/fem/misc/threads/domainthreaditerator.hh +include/dune/fem/misc/threads/threaditerator.hh +include/dune/fem/misc/threads/threaditeratorstorage.hh +include/dune/fem/misc/threads/threadmanager.hh +include/dune/fem/misc/threads/threadpartitioner.hh +include/dune/fem/misc/threads/threadsafevalue.hh +include/dune/fem/misc/umfpack.hh +include/dune/fem/operator/1order/dgmasspass.hh +include/dune/fem/operator/1order/localmassmatrix.hh +include/dune/fem/operator/common/automaticdifferenceoperator.hh +include/dune/fem/operator/common/differentiableoperator.hh +include/dune/fem/operator/common/localcontribution.hh +include/dune/fem/operator/common/localmatrix.hh +include/dune/fem/operator/common/localmatrixwrapper.hh +include/dune/fem/operator/common/localoperator.hh +include/dune/fem/operator/common/mapping.hh +include/dune/fem/operator/common/objpointer.hh +include/dune/fem/operator/common/operator.hh +include/dune/fem/operator/common/spaceoperatorif.hh +include/dune/fem/operator/common/stencil.hh +include/dune/fem/operator/common/temporarylocalmatrix.hh +include/dune/fem/operator/common/tuple.hh +include/dune/fem/operator/dghelmholtz.hh +include/dune/fem/operator/linear/blockdiagonal.hh +include/dune/fem/operator/linear/denserow.hh +include/dune/fem/operator/linear/eigenoperator.hh +include/dune/fem/operator/linear/istladapter.hh +include/dune/fem/operator/linear/istloperator.hh +include/dune/fem/operator/linear/petscoperator.hh +include/dune/fem/operator/linear/spoperator.hh +include/dune/fem/operator/matrix/blockmatrix.hh +include/dune/fem/operator/matrix/colcompspmatrix.hh +include/dune/fem/operator/matrix/columnobject.hh +include/dune/fem/operator/matrix/densematrix.hh +include/dune/fem/operator/matrix/eigenmatrix.hh +include/dune/fem/operator/matrix/functor.hh +include/dune/fem/operator/matrix/istlmatrix.hh +include/dune/fem/operator/matrix/istlmatrixadapter.hh +include/dune/fem/operator/matrix/istlpreconditioner.hh +include/dune/fem/operator/matrix/preconditionerwrapper.hh +include/dune/fem/operator/matrix/spmatrix.hh +include/dune/fem/operator/projection/dgl2projection.hh +include/dune/fem/operator/projection/hdivprojection.hh +include/dune/fem/operator/projection/l2projection.hh +include/dune/fem/operator/projection/local/l2projection.hh +include/dune/fem/operator/projection/local/riesz.hh +include/dune/fem/operator/projection/local/riesz/dense.hh +include/dune/fem/operator/projection/local/riesz/localrieszprojection.hh +include/dune/fem/operator/projection/local/riesz/orthonormal.hh +include/dune/fem/operator/projection/vtxprojection.hh +include/dune/fem/pass/common/local.hh +include/dune/fem/pass/common/localfunctionselector.hh +include/dune/fem/pass/common/localfunctiontuple.hh +include/dune/fem/pass/common/pass.hh +include/dune/fem/pass/common/selector.hh +include/dune/fem/pass/createpass.hh +include/dune/fem/pass/dginversemass.hh +include/dune/fem/pass/insertfunction.hh +include/dune/fem/pass/insertoperator.hh +include/dune/fem/pass/localdg.hh +include/dune/fem/pass/localdg/discretemodel.hh +include/dune/fem/pass/localdg/modelcaller.hh +include/dune/fem/pass/localdg/pass.hh +include/dune/fem/quadrature/caching/cacheprovider.cc +include/dune/fem/quadrature/caching/cacheprovider.hh +include/dune/fem/quadrature/caching/pointmapper.hh +include/dune/fem/quadrature/caching/pointprovider.cc +include/dune/fem/quadrature/caching/pointprovider.hh +include/dune/fem/quadrature/caching/registry.hh +include/dune/fem/quadrature/caching/topology.cc +include/dune/fem/quadrature/caching/topology.hh +include/dune/fem/quadrature/caching/twistprovider.cc +include/dune/fem/quadrature/caching/twistprovider.hh +include/dune/fem/quadrature/caching/twistutility.cc +include/dune/fem/quadrature/caching/twistutility.hh +include/dune/fem/quadrature/cachingpointlist.hh +include/dune/fem/quadrature/cachingquadrature.hh +include/dune/fem/quadrature/cornerpointset.hh +include/dune/fem/quadrature/defaultquadratures.hh +include/dune/fem/quadrature/dunequadratures.hh +include/dune/fem/quadrature/elementpointlist.hh +include/dune/fem/quadrature/elementpointlistbase.hh +include/dune/fem/quadrature/elementquadrature.hh +include/dune/fem/quadrature/femquadratures.hh +include/dune/fem/quadrature/femquadratures_inline.hh +include/dune/fem/quadrature/gausspoints.hh +include/dune/fem/quadrature/gausspoints_implementation.hh +include/dune/fem/quadrature/geometric/gausslegendre.hh +include/dune/fem/quadrature/geometric/geometry.hh +include/dune/fem/quadrature/geometric/quadrature.hh +include/dune/fem/quadrature/idprovider.hh +include/dune/fem/quadrature/integrator.hh +include/dune/fem/quadrature/intersectionquadrature.hh +include/dune/fem/quadrature/lumpingquadrature.hh +include/dune/fem/quadrature/pardgsimplexquadrature.hh +include/dune/fem/quadrature/pyramidpoints.hh +include/dune/fem/quadrature/quadprovider.hh +include/dune/fem/quadrature/quadrature.hh +include/dune/fem/quadrature/quadratureimp.hh +include/dune/fem/quadrature/quadratureimp_inline.hh +include/dune/fem/solver/cginverseoperator.hh +include/dune/fem/solver/diagonalpreconditioner.hh +include/dune/fem/solver/eigen.hh +include/dune/fem/solver/istlinverseoperators.hh +include/dune/fem/solver/istlsolver.hh +include/dune/fem/solver/krylovinverseoperators.hh +include/dune/fem/solver/ldlsolver.hh +include/dune/fem/solver/linear/bicgstab.hh +include/dune/fem/solver/linear/cg.hh +include/dune/fem/solver/linear/gmres.hh +include/dune/fem/solver/multistep.hh +include/dune/fem/solver/newtoninverseoperator.hh +include/dune/fem/solver/ode/blas.hpp +include/dune/fem/solver/ode/communicator.hpp +include/dune/fem/solver/ode/dynamical_object.hpp +include/dune/fem/solver/ode/emptycommunicator.hpp +include/dune/fem/solver/ode/function.hpp +include/dune/fem/solver/ode/iterative_solver.hpp +include/dune/fem/solver/ode/limiter.hpp +include/dune/fem/solver/ode/linear_solver.hpp +include/dune/fem/solver/ode/matrix.hpp +include/dune/fem/solver/ode/mpicommunicator.hpp +include/dune/fem/solver/ode/newton.hpp 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