From c779176e8acd922a35343840de84efffa4974bd0 Mon Sep 17 00:00:00 2001
From: Nuno Teixeira <eduardo@FreeBSD.org>
Date: Sun, 3 Mar 2024 09:21:58 +0000
Subject: [PATCH] biology/locarna: Move man pages to share/man

Approved by:	portmgr (blanket)
---
 biology/locarna/Makefile  |  2 ++
 biology/locarna/pkg-plist | 56 +++++++++++++++++++--------------------
 2 files changed, 30 insertions(+), 28 deletions(-)

diff --git a/biology/locarna/Makefile b/biology/locarna/Makefile
index 53d51d26f8c8..a6c74fd931e6 100644
--- a/biology/locarna/Makefile
+++ b/biology/locarna/Makefile
@@ -1,5 +1,6 @@
 PORTNAME=	locarna
 DISTVERSION=	2.0.0
+PORTREVISION=	1
 CATEGORIES=	biology
 MASTER_SITES=	https://github.com/s-will/LocARNA/releases/download/v${DISTVERSION}/
 
@@ -27,6 +28,7 @@ SHEBANG_FILES=	src/Utils/locarna_mcc \
 		src/Tests/test_programs
 
 GNU_CONFIGURE=	yes
+GNU_CONFIGURE_MANPREFIX=	${PREFIX}/share
 
 INSTALL_TARGET=	install-strip
 TEST_TARGET=	check # one test fails, see https://github.com/s-will/LocARNA/issues/81
diff --git a/biology/locarna/pkg-plist b/biology/locarna/pkg-plist
index 0d6039099397..aaf183bf0bec 100644
--- a/biology/locarna/pkg-plist
+++ b/biology/locarna/pkg-plist
@@ -103,32 +103,32 @@ lib/perl/MLocarna/Tree.pm
 lib/perl/MLocarna/threaded.pm
 lib/perl/MLocarna/unthreaded.pm
 libdata/pkgconfig/LocARNA-2.0.pc
-man/man1/aln-seqs.pl.1.gz
-man/man1/aln2fa.pl.1.gz
-man/man1/alnsel.pl.1.gz
-man/man1/average-dot.pl.1.gz
-man/man1/dot2pp.1.gz
-man/man1/exparna_p.1.gz
-man/man1/exploc_p.1.gz
-man/man1/gen-reliab-dot.pl.1.gz
-man/man1/locarna-mea.pl.1.gz
-man/man1/locarna-motif-scan.1.gz
-man/man1/locarna.1.gz
-man/man1/locarna_deviation.1.gz
-man/man1/locarna_mcc.1.gz
-man/man1/locarna_p.1.gz
-man/man1/locarna_rnafold_pp.1.gz
-man/man1/locarnap-predict-and-plot.pl.1.gz
-man/man1/locarnap-realign-all.pl.1.gz
-man/man1/locarnap-revcomp.pl.1.gz
-man/man1/locarnap-revisit-RNAz-hits.pl.1.gz
-man/man1/locarnap_fit.1.gz
-man/man1/locarnate.1.gz
-man/man1/mlocarna.1.gz
-man/man1/mlocarna_nnames.1.gz
-man/man1/plot-bmprobs.1.gz
-man/man1/pp2dot.1.gz
-man/man1/reliability-profile.pl.1.gz
-man/man1/ribosum2cc.1.gz
-man/man1/sparse.1.gz
+share/man/man1/aln-seqs.pl.1.gz
+share/man/man1/aln2fa.pl.1.gz
+share/man/man1/alnsel.pl.1.gz
+share/man/man1/average-dot.pl.1.gz
+share/man/man1/dot2pp.1.gz
+share/man/man1/exparna_p.1.gz
+share/man/man1/exploc_p.1.gz
+share/man/man1/gen-reliab-dot.pl.1.gz
+share/man/man1/locarna-mea.pl.1.gz
+share/man/man1/locarna-motif-scan.1.gz
+share/man/man1/locarna.1.gz
+share/man/man1/locarna_deviation.1.gz
+share/man/man1/locarna_mcc.1.gz
+share/man/man1/locarna_p.1.gz
+share/man/man1/locarna_rnafold_pp.1.gz
+share/man/man1/locarnap-predict-and-plot.pl.1.gz
+share/man/man1/locarnap-realign-all.pl.1.gz
+share/man/man1/locarnap-revcomp.pl.1.gz
+share/man/man1/locarnap-revisit-RNAz-hits.pl.1.gz
+share/man/man1/locarnap_fit.1.gz
+share/man/man1/locarnate.1.gz
+share/man/man1/mlocarna.1.gz
+share/man/man1/mlocarna_nnames.1.gz
+share/man/man1/plot-bmprobs.1.gz
+share/man/man1/pp2dot.1.gz
+share/man/man1/reliability-profile.pl.1.gz
+share/man/man1/ribosum2cc.1.gz
+share/man/man1/sparse.1.gz
 %%DATADIR%%/Matrices/RIBOSUM85_60