From eeb65f1dea6c3bf88e9687fee959c5d4ee147032 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Fernando=20Apestegu=C3=ADa?= <fernape@FreeBSD.org> Date: Fri, 10 Jul 2020 09:45:48 +0000 Subject: [PATCH] biology/phyml: update to 3.3.20200621 From ChangeLog: https://github.com/stephaneguindon/phyml/releases/tag/v3.3.20200621 This release fixes a few minor bugs (see recent commits). The manual also gives extra XML configuration information in order to apply fancy substitution models (e.g., CAT-like) on single- or multiple-gene data sets Reported by: portscout --- biology/phyml/Makefile | 5 ++--- biology/phyml/distinfo | 6 +++--- 2 files changed, 5 insertions(+), 6 deletions(-) diff --git a/biology/phyml/Makefile b/biology/phyml/Makefile index 648c2b66cb6b..e2383eaded5f 100644 --- a/biology/phyml/Makefile +++ b/biology/phyml/Makefile @@ -3,8 +3,7 @@ PORTNAME= phyml DISTVERSIONPREFIX= v -DISTVERSION= 3.3.20190909 -PORTREVISION= 3 +DISTVERSION= 3.3.20200621 PORTEPOCH= 1 CATEGORIES= biology @@ -22,9 +21,9 @@ GH_ACCOUNT= stephaneguindon GNU_CONFIGURE= yes CONFIGURE_ARGS= --disable-beagle --disable-native +PLIST_FILES= bin/phyml${BIN_SUFFIX} PORTDOCS= * PORTEXAMPLES= * -PLIST_FILES= bin/phyml${BIN_SUFFIX} OPTIONS_DEFINE= DOCS EXAMPLES OPTIONS_RADIO= MPI diff --git a/biology/phyml/distinfo b/biology/phyml/distinfo index fdb1a1dde279..bb7619ad9861 100644 --- a/biology/phyml/distinfo +++ b/biology/phyml/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1568127899 -SHA256 (stephaneguindon-phyml-v3.3.20190909_GH0.tar.gz) = f3afd6d5332cd98298736b3c6df63d751fa74388a0e972ec08f63a032d5e6a9c -SIZE (stephaneguindon-phyml-v3.3.20190909_GH0.tar.gz) = 2237651 +TIMESTAMP = 1594372740 +SHA256 (stephaneguindon-phyml-v3.3.20200621_GH0.tar.gz) = ffbecbc716fe7dd3e25493d2ebc1aab42ff3c33fc6fffca0920a950d38d74e22 +SIZE (stephaneguindon-phyml-v3.3.20200621_GH0.tar.gz) = 2234125