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1425 Commits

Author SHA1 Message Date
Jason Helfman
82c28cbbf5 - adopt optionsNG 
- trim historical header
- tighten COMMENT

Approved by:	portmgr (miwi)
 2013-03-18 23:35:01 +00:00
Vanilla I. Shu
5e191b87d1 1: Upgrade protobuf to 2.5.0. 
2: bump revision.
3: document UPDATING.
 2013-03-18 15:14:27 +00:00
Jason Helfman
3005e8f2fc - adoption of optionsNG 
- trim historical header

Approved by:	portmgr (miwi)
 2013-03-18 06:55:42 +00:00
Jason Helfman
4153f3e96b - adoption of optionsNG 
- trim historical header
- fix mixture of DOCS/EXAMPLES -> EXAMPLES
- add shared description for GLUT to bodm

Approved by:	portmgr (miwi)
 2013-03-18 06:54:39 +00:00
Jason Helfman
21ff3eb3b7 - adoption of optionsNG 
- trim historical header
- tighten COMMENT

Approved by:	portmgr (miwi)
 2013-03-18 06:50:12 +00:00
Jason Helfman
aa6aea716d - adoption of optionsNG 
- trim historical header
- use tabs in favor of spaces

Approved by:	portmgr (miwi)
 2013-03-18 06:48:55 +00:00
Martin Wilke
1b607e2b11 - Update to 2012.06.20 
PR:		176544
Submitted by:	Ports Fury
 2013-03-14 05:27:58 +00:00
Baptiste Daroussin
9250d94365 Convert USE_BISON to USES= bison 
It brings bison as a build dependency in case it is set the following way:
USES= bison or USES= bison:build

it brings bison as a run dependency in case it is set the following way:
USES= bison:run

it brings bison both as a run and build dependency in case it the set the following way:
USES= bison:both

While here trim some headers
Convert some USE_GNOME= gnomehack to USES= pathfix
 2013-03-08 11:32:11 +00:00
Rene Ladan
a155d81752 Remove compatibility with FreeBSD 7.X 
While here pet Makefile headers.
 2013-03-06 23:31:58 +00:00
Eitan Adler
0a035043de Add missing item to pkg-plist reported by QAT but not reported by poudriere. 2013-03-03 15:22:43 +00:00
Eitan Adler
0bf06bbddc Update to 2.33 2013-03-03 01:45:00 +00:00
Martin Wilke
ac8c5f4481 - Update to 2.4.1 
PR:		176552
Submitted by:	Ports Fury
 2013-03-02 14:50:25 +00:00
Alexey Dokuchaev
bb8c521c72 Unbreak on 7.X and i386 systems. 
Reported by:	QAT
 2013-02-25 13:00:15 +00:00
Alexey Dokuchaev
53bda2f119 Add Unipro UGENE, a free open-source crowss-platform bioinformatics software. 
PR:		ports/173387
Submitted by:	Hannes Hauswedell
 2013-02-23 04:50:48 +00:00
Frederic Culot
417a7b673b - Update to 0.52 [1] 
- Capitalize names (Perl) in COMMENT

PR:		ports/176003 [1]
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2013-02-16 14:58:51 +00:00
Ruslan Makhmatkhanov
a699fc1724 - remove empty files 2013-02-15 08:57:19 +00:00
Martin Wilke
c23a507726 - Fix build with clang 
PR:		175034
Submitted by:	Ports Fury
 2013-02-10 07:55:45 +00:00
Philippe Audeoud
9b5140c936 - Update to 1.27 
- Changelog: http://cpansearch.perl.org/src/TFRAYNER/Bio-MAGETAB-1.27/Changes
 2013-02-05 14:45:14 +00:00
Marcelo Araujo
6faa1b7774 - Update to 20121109. 
PR:		ports/175014
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
 2013-02-04 10:07:30 +00:00
Thomas Abthorpe
49626f567a - Strip header at request of original creator 
Submitted by:	trevor
With hat:	portmgr
 2013-01-27 05:55:20 +00:00
Philippe Audeoud
fad40cef87 - Update to 2.32 
- Changelog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.32/Changes
 2013-01-24 14:36:55 +00:00
Max Brazhnikov
81c27c891a Bump PORTREVISION after DESKTOP_ENTRIES update 2013-01-23 15:00:18 +00:00
Marcelo Araujo
05e78fe84a - Update to 9.03. 
PR:		ports/172499
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
 2013-01-14 08:04:38 +00:00
Max Brazhnikov
5dd37213f5 - Update DESKTOP_ENTRIES: 
* rephrase Comment field or use port ${COMMENT} if appropriate
  * adjust Icon field according to the Desktop Entry Specification
  * update Categories field: remove deprecated category Application;
    set main category, if missing
- Remove indefinite article and/or rephrase COMMENT
- Trim Makefile header
- Other minor changes
 2013-01-07 02:07:26 +00:00
Rene Ladan
b29162eed1 Take over maintainership. 
Approved by:	pav (previous maintainer)
 2012-12-28 21:59:42 +00:00
Rene Ladan
b06829187f Use the new project URL to let the application attach coorectly to the 
project, and some cleanups:
- use optionsNG
- update commands in pkg-install.in
- improve %%AMD64%% comment handling
- convert Makefile header
- remove unused variable SIMAP_URL

Bump PORTREVISION

PR:		ports/174748
Submitted by:	myself
Approved by:	maintainer (pav@)
 2012-12-27 20:12:06 +00:00
Andrej Zverev
14d750125f Cleanup supporting perl version 5.8 and 5.10, 
lang/perl5.8 and lang/5.10 will be removed from ports tree soon.
 2012-12-17 15:39:36 +00:00
Wen Heping
b7e651129e - Update to 1.5 
Changes: http://cpansearch.perl.org/src/RBUELS/Bio-GFF3-1.5/Changes
 2012-12-16 04:22:15 +00:00
Eitan Adler
1c155b4991 Update to 5.0.4 2012-12-14 17:47:16 +00:00
Max Brazhnikov
4beaa15d30 - Mark conflict with science/openbabel 
- Trim Makefile header
 2012-12-11 14:24:51 +00:00
Max Brazhnikov
5bf9bfc399 science/openbabel: 
- Update openbabel to 2.3.2
- Switch to CMake build system
- Add PYTHON and CAIRO options
- Don't rename babel binary, mark conflict with ancient biology/babel

science/py-openbabel:
- Merge py-openbabel to openbabel

other:
- chase openbabel update
 2012-12-11 14:19:54 +00:00
Baptiste Daroussin
db767ee750 Remove hardcoded extract dependency on diablo-jdk16, directly use USE_ZIP 
instead given that jar files are just zip files, remove hardcoded do extract
target.

Reported by:	linimon, matthew
 2012-12-11 07:26:38 +00:00
Baptiste Daroussin
7c354b1913 Decommissioning java 1.5 (EOLed since October 2009): 
suppress any reference to JAVA_VERSION=	1.5+ (part2)
 2012-12-10 13:18:28 +00:00
Baptiste Daroussin
580b0c7423 Decommissioning java 1.5 (EOLed since October 2009): 
suppress any reference to USE_JAVA=	1.5+ (part1)
 2012-12-10 11:25:27 +00:00
Pawel Pekala
e8c48e4d84 - Support CC properly 
- Switch to PLIST_FILES
- Add option for GTK2 support

PR:		ports/174174
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
 2012-12-07 22:22:06 +00:00
Anton Berezin
c25a46dd74 Update to 2.31. 
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes

Feature safe:	yes
 2012-12-07 13:49:15 +00:00
Ryan Steinmetz
33a2019014 - Reset MAINTAINER due to unrecoverable email bounce 
Reported by:	portscout
Feature safe:	yes
 2012-12-04 20:28:16 +00:00
Pietro Cerutti
a6f872f2b0 - Fix build with clang 
Feature safe:	yes
 2012-12-03 11:27:47 +00:00
Armin Pirkovitsch
2b222ce70c - Update to version 6.1.01 
- Add MAKE_JOBS_SAFE
- Convert to optionsng
- Trim Makefile header

PR:           ports/171971
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by:  beat (mentor)
Feature safe: yes
 2012-12-01 00:00:43 +00:00
Armin Pirkovitsch
f50819ce60 - Update to version 5.0.2 
- Add MAKE_JOBS_UNSAFE
- Convert to optionsng

PR:           ports/171970
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by:  beat (mentor)
Feature safe: yes
 2012-11-30 23:51:49 +00:00
Baptiste Daroussin
18210032c9 2012-11-26 benchmarks/gsbench: No more public distfiles 
2012-11-26 benchmarks/xengine: No more public distfiles
2012-11-26 biology/belvu: No more public distfiles
2012-11-26 multimedia/kaffeine-mozilla: No more public distfiles
2012-11-26 www/gnustep-ticker: Abandonware
2012-11-26 net/tryst-examples: Abandonware
2012-11-26 net/tryst: Abandonware

Feature safe:	yes
 2012-11-28 09:05:54 +00:00
Wen Heping
2a3cdaf773 - Update to version 2.0 
- Update pkg-descr

PR:		172497
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>

Feature safe:	yes
 2012-11-15 07:04:29 +00:00
Pawel Pekala
ff942cf270 - Update to version 4.4.0 
- Mark MAKE_JOBS_SAFE
- Make dependency on print/pdflib optional
- Switch to PLIST_FILES

While here:
- Add missing deps
- Add desktop entry

PR:		ports/172498
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
 2012-10-30 20:31:14 +00:00
Pawel Pekala
987bb3de6b Update to version 2.12.4 
PR:		ports/172218
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
 2012-10-30 17:53:39 +00:00
Wen Heping
cb1e050008 - Reset maintainer to perl@ 
Feature safe:	yes
 2012-10-30 02:03:29 +00:00
Wen Heping
68d3450c97 - Update to 1.4 
Changes: http://cpansearch.perl.org/src/RBUELS/Bio-GFF3-1.4/Changes
- Trim Makefile headers

Feature safe:	yes
 2012-10-30 01:59:37 +00:00
Wen Heping
a2845e428a - Trim Makefile headers 
- Reset maintainer to perl@

Feature safe:	yes
 2012-10-30 01:47:15 +00:00
Baptiste Daroussin
da6c3af5fc Deprecate a bunch of ports that are either abandonware and/or for which no more 
public distfiles are available, or for which are -devel version with a more
recent stable version for long

Feature safe:	yes
 2012-10-26 14:57:50 +00:00
Baptiste Daroussin
3db2e90933 2012-10-20 chinese/wangttf: No more public distfiles 
2012-10-20 chinese/stardict-dict-zh_TW: No more public distfiles
2012-10-20 chinese/stardict-dict-zh_CN: No more public distfiles
2012-10-20 chinese/mingunittf: No more public distfiles
2012-10-20 chinese/dfsongsd: No more public distfiles
2012-10-20 biology/dna-qc: No more public distfiles

Feature safe:	yes
 2012-10-25 23:05:56 +00:00
Wen Heping
5c73d4b55d - Update to 1.26 
Changes: http://cpansearch.perl.org/src/TFRAYNER/Bio-MAGETAB-1.26/Changes

Feature safe:	yes
 2012-10-25 00:18:32 +00:00