Pav Lucistnik cfaac59499 Add blast, a powerful software package for gene and protein identification, ... using sensitive, selective and rapid similarity searches of protein and nucleotide sequence databases. PR: ports/69636 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>		2004-11-11 21:35:04 +00:00
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act
ariadne	Add ariadne 1.3, programs to compare protein sequences and	2004-06-22 14:29:59 +00:00
artemis
avida	The build should be fixed now, so remove BROKEN mark.	2004-09-23 07:10:32 +00:00
babel
biojava
blast	Add blast, a powerful software package for gene and protein identification,	2004-11-11 21:35:04 +00:00
chemeq
clustalw
coalesce
crimap
deft	BROKEN on 5.x: Does not install	2004-09-18 16:35:47 +00:00
distribfold	Drop maintainership	2004-06-24 14:28:12 +00:00
dna-qc
emboss	Fix MASTER_SITES:	2004-06-23 08:20:21 +00:00
fasta	Update to fix fetch. Rework PORTVERSION to be more like biology/fasta3	2004-07-01 06:24:01 +00:00
fasta3	Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a	2004-07-01 03:02:23 +00:00
fastdnaml
flip
fluctuate
garlic
genpak
gff2ps
gperiodic	Bump PORTREVISIONS for all ports that depend on atk or pango to ease in the	2004-11-07 22:37:47 +00:00
grappa	This is now buildable on 5.x, remove BROKEN.	2004-08-17 10:29:40 +00:00
hmmer
kinemage
L-Breeder	Bump PORTREVISIONS for all ports that depend on atk or pango to ease in the	2004-11-07 22:37:47 +00:00
lamarc
libgenome	Apply a big libtool patch to allow porters to use the libtool installed by	2004-07-09 17:43:11 +00:00
lsysexp	Bump PORTREVISIONS for all ports that depend on atk or pango to ease in the	2004-11-07 22:37:47 +00:00
migrate	Update to 1.7.6.1.	2004-06-30 06:55:56 +00:00
molden	BROKEN: Checksum mismatch	2004-06-20 08:40:40 +00:00
mopac	BROKEN on 5.x: Does not install	2004-09-19 01:18:56 +00:00
nab	Now installs on FreeBSD 5.x.	2004-10-28 21:01:05 +00:00
ncbi-toolkit	- Update to 2004.06.16	2004-11-01 22:21:02 +00:00
nclever
ortep3
p5-AcePerl
p5-bioperl	- add missing MAN1 and MAN3	2004-09-03 17:04:38 +00:00
paml	Update to 3.14	2004-11-06 03:55:37 +00:00
phylip	- Update to 3.62	2004-10-11 22:26:34 +00:00
platon
povchem
primer3
psi88
py-biopython	- Fix build on amd64 (crude hack to pass -fPIC to c++ compiles)	2004-11-06 23:12:14 +00:00
pymol	Avoid the use of != statements in ports Makefile	2004-10-24 03:37:02 +00:00
rasmol	Update to version 2.7.2.1.1	2004-07-09 18:01:11 +00:00
recombine
ruby-bio	Fix distsite	2004-07-06 14:31:55 +00:00
seaview
seqio
sim4
spdbv	Correct a typo: s/linux-opera/linux-openmotif/g.	2004-11-01 22:26:55 +00:00
t_coffee
tinker	Upgrade to latest revision to make fetchable again.	2004-09-25 08:06:08 +00:00
treepuzzle	- Update to 5.2	2004-07-30 22:02:00 +00:00
treeviewx	Bump PORTREVISIONS for all ports that depend on atk or pango to ease in the	2004-11-07 22:37:47 +00:00
tRNAscan-SE
wise
xdrawchem
xmolwt
Makefile	Add blast, a powerful software package for gene and protein identification,	2004-11-11 21:35:04 +00:00