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49 lines
1.3 KiB
Makefile
49 lines
1.3 KiB
Makefile
# New ports collection Makefile for: hmmer
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# Date created: June 29 1998
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# Whom: barnhart@genetics.wustl.edu
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#
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# $FreeBSD$
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#
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PORTNAME= hmmer
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PORTVERSION= 2.3.2
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CATEGORIES= biology
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MASTER_SITES= ftp://selab.janelia.org/pub/software/hmmer/CURRENT/
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MAINTAINER= fernan@iib.unsam.edu.ar
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COMMENT= Profile hidden Markov models for biological sequence analysis
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GNU_CONFIGURE= yes
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USE_PERL5= yes
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CONFIGURE_ARGS+=--enable-threads --enable-lfs
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DOCFILES= 00README COPYRIGHT INSTALL LICENSE NOTES Userguide.pdf
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EXAMPLES= 7LES_DROME amino.null globins50.msf nucleic.pri rrm.sto \
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Artemia.fa amino.pri globins630.fa pkinase.sto RU1A_HUMAN \
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fn3.sto nucleic.null rrm.hmm
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MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 \
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hmmer.1 hmmfetch.1 hmmindex.1 hmmpfam.1 hmmsearch.1
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.if defined(WITH_PVM)
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CONFIGURE_ENV+= PVM_ROOT="${LOCALBASE}/lib/pvm" PVM_ARCH="FREEBSD"
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CONFIGURE_ARGS+= --with-pvm
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BUILD_DEPENDS+= pvm:${PORTSDIR}/net/pvm
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.endif
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post-install:
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.if !defined(NOPORTDOCS)
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@ ${MKDIR} ${DOCSDIR}
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.for docfile in ${DOCFILES}
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@ ${INSTALL_DATA} ${WRKSRC}/${docfile} ${DOCSDIR}
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.endfor
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.endif
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@ ${MKDIR} ${EXAMPLESDIR}
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.for example in ${EXAMPLES}
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@ ${INSTALL_DATA} ${WRKSRC}/tutorial/${example} ${EXAMPLESDIR}
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.endfor
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.if !defined(BATCH)
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@ ${CAT} ${PKGMESSAGE}
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.endif
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.include <bsd.port.mk>
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