Brendan Fabeny 51cd110a01 update math/R to 2.15.3, and adjust dependent ports		2013-03-07 04:21:34 +00:00
..
2d-rewriter
2dhf
abinit	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
afni	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
avogadro	science/openbabel:	2012-12-11 14:19:54 +00:00
bddsolve
bft	Upgrade Code_Saturne to 2.0.	2012-07-07 15:15:56 +00:00
bodr
brian	- Update to 1.4.0	2012-09-04 07:13:08 +00:00
buddy
cdcl	Update to 5.4.7	2012-12-19 03:01:41 +00:00
cdf
cdo	- Convert to new options framework	2012-06-18 16:41:51 +00:00
cgnslib	Fix HDF5 description.	2012-12-10 18:20:15 +00:00
checkmol	- Update to 0.4d	2013-03-02 06:30:55 +00:00
chemical-mime-data	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
chemtool	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
chemtool-devel	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
clhep
colt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
crf++
dcl	- Update to 5.4.7	2012-12-13 02:25:38 +00:00
devisor	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
dlpoly-classic	DL_POLY is a general purpose classical molecular dynamics (MD) simulation	2012-04-17 17:35:33 +00:00
dtiquery
ecs	add math/metis4 to math/Makefile; update math/metis to 5.0.2; add appropriate	2012-07-09 11:11:44 +00:00
elmer-eio
elmer-hutiter
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte	- Update to 2.0.8	2012-08-06 07:19:41 +00:00
euler	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
fastcap
fasthenry
felt	- Update to version 3.07	2012-12-01 00:00:12 +00:00
flounder	- Fix build with clang	2012-12-23 19:11:12 +00:00
fvcom	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvcom-mpi	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvm	Upgrade Code_Saturne to 2.0.	2012-07-07 15:15:56 +00:00
g3data	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
gamess	update to 2012/5/1 R2 version.	2013-03-05 11:43:18 +00:00
gchemutils	science/openbabel:	2012-12-11 14:19:54 +00:00
gdis	- Update to 0.90	2013-03-02 06:29:42 +00:00
getdp	- forgot to remove a file in the last update.	2012-11-08 00:02:06 +00:00
ghemical	Update to 3.0.0.	2013-01-08 10:50:11 +00:00
ghmm
gnudatalanguage	- remove an obsoleted dependency on py-numarray;	2013-01-05 14:28:32 +00:00
gramps	- Update *_DEPENDS on databases/py-bsddb after _bsddb.so relocation	2013-03-04 11:19:40 +00:00
gromacs	- Update to 4.6	2013-02-10 07:56:49 +00:00
gsmc	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
gsystem	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
gtamsanalyzer	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
gwyddion	- Update to 2.31	2013-03-02 14:47:05 +00:00
h5utils	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
harminv
hdf	- Update to 4.2.8.	2012-12-20 05:41:13 +00:00
hdf5
hdf5-18	- Update to 1.8.9	2012-06-06 16:45:22 +00:00
hdf-java	Convert to new option framework	2012-12-13 10:47:44 +00:00
hs-bio	- Fix breakage in the DYNAMIC-enabled ports triggered by the recent	2013-02-05 22:26:31 +00:00
InsightToolkit
isaac-cfd
jmol	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
jstrack	- update to 3.3.4 (old version isn't fetchable anymore)	2012-11-08 11:40:29 +00:00
kalzium	KDE/FreeBSD team presents KDE SC 4.9.5 ports!	2013-02-03 20:10:37 +00:00
kmovisto	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
kst	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
kst2	Update to 2.0.6	2012-10-11 11:25:19 +00:00
lamprop
libctl
libghemical	* Update to 3.0.0.	2013-01-08 06:53:51 +00:00
libint
libkml	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
liblinear
liboglappth	update to 1.0.0.	2013-01-08 07:13:23 +00:00
libquantum
libsvm
libsvm-python
linsmith	- Fix build with clang	2013-02-07 14:36:55 +00:00
massxpert	- Update to 3.4.0	2013-02-09 14:02:02 +00:00
mayavi	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
mbdyn	add math/metis4 to math/Makefile; update math/metis to 5.0.2; add appropriate	2012-07-09 11:11:44 +00:00
mcstas	- Remove SITE_PERL from *_DEPENDS	2012-06-30 14:53:22 +00:00
medit	Upgrade to 2012.02.05.	2012-11-22 21:39:32 +00:00
meep	Replace USE_GCC=4.5+ by USE_GCC=4.6+ which has been transparently	2012-04-07 15:31:51 +00:00
mei	MEI stands for Mathematical Expression Interpreter.	2012-07-07 15:15:08 +00:00
minc	Update to version 1.5.1 [1]	2012-07-20 16:32:07 +00:00
minc2	Update to version 2.0.18 [1]	2012-07-20 16:33:32 +00:00
mol2ps	- Update to 0.3	2013-03-02 14:54:19 +00:00
mpb
mpqc	Fix recent build on tinderbox. Somehow "sc_PsiCCSD_T.3" is not	2013-01-08 04:49:03 +00:00
mpqc-mpich	Fix the two affected ports	2012-02-10 09:33:05 +00:00
ncs	Bump PORTREVISON after devel/py-sip and devel/qscintilla2 update.	2013-02-03 18:16:54 +00:00
netcdf
netcdf3-ftn
netcdf4
netcdf-ftn
nifticlib	- Fix typos in COMMENT	2012-08-02 09:02:43 +00:00
omnetpp	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
openbabel	science/openbabel:	2012-12-11 14:19:54 +00:00
ovt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
p5-Algorithm-SVMLight	- Assign clsung's p5- ports to perl@	2012-05-01 01:47:10 +00:00
p5-Chemistry-3DBuilder	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Bond-Find	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Canonicalize	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-Mopac	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-PDB	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
p5-Chemistry-File-SLN	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-SMARTS	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-SMILES	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-VRML	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-XYZ	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-FormulaPattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-InternalCoords	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Isotope
p5-Chemistry-MacroMol	- Trim Makefile headers	2012-12-07 07:13:56 +00:00
p5-Chemistry-MidasPattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Mok	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Mol	- Trim Makefile headers	2012-12-06 02:12:52 +00:00
p5-Chemistry-Pattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Reaction	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Ring	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Geo-BUFR
p5-Geo-Coordinates-Converter	Cleanup supporting perl version 5.8 and 5.10,	2012-12-17 06:15:27 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS	Update to 0.011.	2013-01-29 08:50:49 +00:00
p5-PerlMol	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Physics-Unit	- Update to 0.53	2012-05-26 07:29:57 +00:00
paje	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
paraview	- Convert USE_QT_VER=4 and QT_COMPONETS to USE_QT4	2012-06-06 06:44:37 +00:00
peekabot	- Please welcome back Chris Petrik as maintainer of	2013-03-07 03:25:10 +00:00
pnetcdf	- Update to 1.3.1	2012-09-30 04:19:04 +00:00
psi3	- Fix all cases of 'No newline at end of file' in ports tree	2013-02-01 15:04:00 +00:00
psychopy	- Update to 1.75.01	2013-01-15 06:22:00 +00:00
py-biolccc	Update to 1.4.0	2012-05-13 12:20:54 +00:00
py-DendroPy	Update to 3.12.0	2012-07-18 06:21:15 +00:00
py-h5py
py-hcluster	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
py-mdp	- Update to 3.2	2012-08-08 21:27:15 +00:00
py-mlpy
py-netCDF4	- Update to 1.0.2	2012-11-27 03:28:28 +00:00
py-obspy-core	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.db	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.gse2	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.imaging	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.iris	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.mseed	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.signal	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.taup	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.wav	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.xseed	- Update to 0.7.0	2012-10-10 06:25:58 +00:00
py-paida	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
py-pydicom	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
py-scikit-learn	Fix dep.	2012-11-08 11:37:48 +00:00
py-scimath
py-scipy	- update to 0.11.0	2012-10-17 06:15:16 +00:00
py-ws2300	- Update to 1.7 [1]	2012-12-09 13:19:39 +00:00
pybrain
pycdf
pynn	- Update to 0.7.5	2013-03-02 05:49:40 +00:00
qcl
qtresistors	- Convert USE_QT_VER=4 and QT_COMPONETS to USE_QT4	2012-06-06 06:44:37 +00:00
R-cran-AMORE	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-bayesm	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-DCluster	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-e1071	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-eco	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-Epi	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-epicalc	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-snow	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-som	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
ruby-dcl	- Update to 1.7.0.	2012-07-25 01:23:45 +00:00
ruby-gphys	- Update to 1.2.2	2013-01-22 03:31:11 +00:00
ruby-netcdf	- update to 0.6.6	2012-03-08 04:34:40 +00:00
rubygem-ai4r	- Add patch to fix build	2013-02-26 02:34:03 +00:00
silo	- Update to 4.9	2013-03-02 14:49:28 +00:00
simlib
step	KDE/FreeBSD team presents KDE SC 4.9.5 ports!	2013-02-03 20:10:37 +00:00
svmlight
szip
udunits	- Remove unnecessary USE_PERL5	2012-05-06 09:35:33 +00:00
v_sim	science/openbabel:	2012-12-11 14:19:54 +00:00
veusz	Bump PORTREVISON after devel/py-sip and devel/qscintilla2 update.	2013-02-03 18:16:54 +00:00
vmd	Update to 1.9.1.	2012-04-23 04:48:03 +00:00
x11iraf	Register CONFLICTS	2012-06-11 09:52:17 +00:00
xmakemol	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
xmds
Makefile	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00