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freebsd-ports/science
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Cheng-Lung Sung c5b1a6d6ef - update to 0.49 
- 0.49 is out, and I missed it in last commit
- Changes
  2007-08-18: CRF++ 0.49 Released

    * Added setter/getter for nbest, cost_factor and vlevel to API

  2007-07-07: CRF++ 0.48 Released

    * Support L1-CRF. use -a CRF-L1 option to enable L1 regularization.
2007-08-21 09:47:20 +00:00
..
2dhf Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 01:14:56 +00:00
abinit Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 10:16:23 +00:00
afni - Update to 2007.06.15.1339 2007-06-21 12:33:48 +00:00
at Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 01:14:56 +00:00
bblimage - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
bft Code_Saturne is EDF's general purpose computational fluid dynamics 2007-06-17 21:04:54 +00:00
bodr The Blue Obelisk Data Repository lists many important chemoinformatics data 2007-05-24 22:16:03 +00:00
buddy Use libtool port instead of included one to avoid objformat a.out botch 2007-01-27 08:48:46 +00:00
cdcl - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
cdf Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 01:33:55 +00:00
cdo - Update to 1.0.8 2007-06-29 01:03:28 +00:00
cgnslib The CFD General Notation System (CGNS) provides a standard for recording and 2007-04-01 09:00:23 +00:00
chemical-mime-data The chemical-mime-data package is a collection of data files to add support for 2007-05-24 22:18:10 +00:00
chemtool - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
chemtool-devel - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
clhep
crf++ - update to 0.49 2007-08-21 09:47:20 +00:00
dcl - USE gfortran 2007-07-06 08:37:06 +00:00
devisor - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
dft++ Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 10:16:23 +00:00
ecs Code_Saturne is EDF's general purpose computational fluid dynamics 2007-06-17 21:04:54 +00:00
elmer-eio - Update to 5.3.2. 2007-08-09 03:14:32 +00:00
elmer-fem - Update to 5.3.2. 2007-08-17 02:26:08 +00:00
elmer-hutiter - Update to 5.3.2. 2007-08-17 11:59:24 +00:00
elmer-matc - Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-12 21:50:03 +00:00
elmer-meshgen2d - Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-15 16:12:19 +00:00
elmerfront - Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-15 16:12:19 +00:00
elmergrid - Change my mail address to araujo@. 2007-06-29 16:29:19 +00:00
elmerpost - Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-15 16:12:19 +00:00
euler - Unbreak 2007-06-04 20:03:50 +00:00
fastcap
fasthenry
felt - Fix build 2007-08-15 14:47:19 +00:00
flounder - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
fvm Code_Saturne is EDF's general purpose computational fluid dynamics 2007-06-17 21:04:54 +00:00
g3data - Use proper capitalization in my email address. 2007-07-11 22:06:16 +00:00
gamess Update URIs. 2007-08-13 02:57:58 +00:00
gave - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
gchempaint Chase goffice update. 2007-07-29 07:36:28 +00:00
gchemutils - Update to 0.8.2 2007-07-27 14:24:00 +00:00
gdis - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
gerris - Update patch files location 2007-06-22 09:05:22 +00:00
getdp Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 02:56:36 +00:00
ghemical Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 10:33:14 +00:00
ghmm Use libtool port instead of included version to avoid objformat a.out botch 2007-02-01 02:42:05 +00:00
gnudatalanguage Upgrade to 0.9pre5. 2007-07-17 20:43:11 +00:00
gramps - Set --mandir and --infodir in CONFIGURE_ARGS if the configure script 2007-07-23 09:36:51 +00:00
gromacs - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
gsmc - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
gsystem - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
gtamsanalyzer - update for gnustep-make-2.0.0 2007-05-25 06:04:44 +00:00
gwyddion - Set --mandir and --infodir in CONFIGURE_ARGS if the configure script 2007-07-23 09:36:51 +00:00
hdf Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-12 07:39:20 +00:00
hdf5 Mark as BROKEN on sparc64: gets unaligned memory address on compile. 2007-08-01 07:57:45 +00:00
hdf5-18 Mark as BROKEN on sparc64: gets unaligned memory address on compile. 2007-08-01 07:57:45 +00:00
ics Code_Saturne is EDF's general purpose computational fluid dynamics 2007-06-17 21:04:54 +00:00
InsightToolkit Retire NO_FILTER_SHLIBS now that it no longer serves a purpose 2007-01-30 04:25:35 +00:00
isaac-cfd Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 02:56:36 +00:00
kmovisto - Fix build with gcc 4.2 2007-06-04 19:58:04 +00:00
kst chase math/gsl lib version 2007-06-29 05:46:43 +00:00
kst2 chase math/gsl lib version 2007-06-29 05:46:43 +00:00
lamprop Remove USE_REINPLACE from all categories starting with S 2006-05-13 04:15:53 +00:00
libctl Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 02:56:36 +00:00
libghemical Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 09:51:49 +00:00
libint - Fix after objformat removal 2007-03-27 16:29:28 +00:00
liblinear - Update to 1.1 2007-07-28 07:09:40 +00:00
libsvm - Remove the DESTDIR modifications from individual ports as we have a new, 2007-08-04 11:41:30 +00:00
libsvm-python - Update to 2.84 2007-04-01 12:53:02 +00:00
linsmith - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
mayavi - Make Python 2.5.1 the default Python version 2007-07-30 09:42:28 +00:00
mbdyn Fix build by renaming libcolamd.a to libcolamd_mbdyn.a. 2007-03-09 12:18:21 +00:00
mcstas - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
medit - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
minc science/netcdf 2007-04-10 03:08:59 +00:00
minc2 science/netcdf 2007-04-10 03:08:59 +00:00
mpb Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 02:56:36 +00:00
mpqc Correct mpich dependency. 2007-07-14 22:24:53 +00:00
mpqc-mpich * Use BLAS instead of ATLAS if ATLAS doesn't exist. 2006-11-19 08:42:07 +00:00
ncs Don't set TERM conditionally on pointyhat, to avoid it defaulting to 2007-06-28 18:54:51 +00:00
netcdf - Set --mandir and --infodir in CONFIGURE_ARGS if the configure script 2007-07-23 09:36:51 +00:00
netcdf4 - Set --mandir and --infodir in CONFIGURE_ARGS if the configure script 2007-07-23 09:36:51 +00:00
nifticlib NIfTI-1 is a new Analyze-style data format, proposed by the NIfTI DFWG 2007-04-28 10:58:01 +00:00
oases Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 02:56:36 +00:00
omnetpp - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
oof Now we use USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-14 09:51:49 +00:00
openbabel - Update to 2.1.1 2007-08-20 09:05:30 +00:00
openfoam - Upgrade to 1.4.1 2007-08-10 17:47:20 +00:00
ovt - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
p5-Algorithm-SVMLight - Update to 0.07 2006-12-11 05:29:29 +00:00
p5-Chemistry-Elements - Update to 1.04 2007-08-05 21:27:02 +00:00
paje - update for gnustep-make-2.0.0 2007-05-25 06:04:44 +00:00
paraview - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
pcp Add pcp 2.2, machine learning program for pattern classification. 2006-07-28 03:34:54 +00:00
pnetcdf - Set --mandir and --infodir in CONFIGURE_ARGS if the configure script 2007-07-23 09:36:51 +00:00
psi3 * Only use gfrotran42. not using gcc42. 2007-01-12 10:51:44 +00:00
py-paida - Make Python 2.5.1 the default Python version 2007-07-30 09:42:28 +00:00
py-scipy - USE_FORTRAN=yes to use FORTRAN compiler. 2007-07-27 18:55:31 +00:00
pyvox - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
qcl
ruby-dcl - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
ruby-gphys - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
ruby-netcdf science/netcdf 2007-04-10 03:08:59 +00:00
simlib - Update to 2.18.20061212 2007-01-17 07:27:25 +00:00
svmlight - Fix build on AMD64 2006-08-14 02:35:15 +00:00
szip . Drop maintainership of these ports. Its glaringly obvious that I don't 2007-04-04 03:31:05 +00:00
udunits . Drop maintainership of these ports. Its glaringly obvious that I don't 2007-04-04 03:31:05 +00:00
v_sim - Chase openbabel update 2007-05-24 22:21:26 +00:00
vis5d+ - Switch to USE_FORTRAN knob 2007-07-12 20:29:31 +00:00
vmd - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
x11iraf - Welcome X.org 7.2 \o/. 2007-05-19 20:36:56 +00:00
xloops-ginac - Mark BROKEN on HEAD 2007-07-02 20:03:12 +00:00
xmakemol - Depend on the GL* stuff, to prevent compilation failure for folks with only 2007-07-28 19:58:33 +00:00
xmds Add xmds , XMDS is a code generator that integrates equations;. 2006-07-19 19:58:28 +00:00
Makefile Move speedcrunch from science to math. 2007-08-14 13:29:49 +00:00