mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-11 02:50:24 +00:00
0c61d2954c
. pet portlint: use {} instaed of () at variable;
. use PLIST_FILES, PORTDATA and PORTDOCS at Makefile;
. get rid of pkg-plist;
. remove article from COMMENT;
. trim Makefile headers.
55 lines
1.3 KiB
Makefile
55 lines
1.3 KiB
Makefile
# Created by: chuynh@biolateral.com.au
|
|
# $FreeBSD$
|
|
|
|
PORTNAME= tRNAscan-SE
|
|
PORTVERSION= 1.23
|
|
PORTREVISION= 1
|
|
CATEGORIES= biology
|
|
MASTER_SITES= ftp://selab.janelia.org/pub/software/tRNAscan-SE/
|
|
EXTRACT_SUFX= .tar.Z
|
|
|
|
MAINTAINER= ports@FreeBSD.org
|
|
COMMENT= Improved tool for transfer RNA detection
|
|
|
|
USE_PERL5= yes
|
|
MAKE_ARGS= BINDIR="${PREFIX}/bin" \
|
|
LIBDIR="${DATADIR}" \
|
|
CC="${CC}" \
|
|
CFLAGS="${CFLAGS}"
|
|
|
|
PLIST_FILES+= bin/covels-SE bin/coves-SE bin/eufindtRNA bin/tRNAscan-SE bin/trnascan-1.4
|
|
MAN1= tRNAscan-SE.1
|
|
PORTDATA= *
|
|
PORTDOCS= Manual.ps
|
|
|
|
OPTIONS_DEFINE= DOCS
|
|
|
|
post-patch:
|
|
@${REINPLACE_CMD} -e 's|tRNAscanSE setpaths|tRNAscanSE|g ; \
|
|
s|if tRNAscan-SE|if ./tRNAscan-SE|g' ${WRKSRC}/Makefile
|
|
|
|
do-install:
|
|
.for f in covels-SE coves-SE eufindtRNA trnascan-1.4
|
|
${INSTALL_PROGRAM} ${WRKSRC}/${f} ${PREFIX}/bin
|
|
.endfor
|
|
${INSTALL_SCRIPT} ${WRKSRC}/tRNAscan-SE ${PREFIX}/bin
|
|
${INSTALL_MAN} ${WRKSRC}/tRNAscan-SE.man ${MANPREFIX}/man/man1/tRNAscan-SE.1
|
|
@${MKDIR} ${DATADIR}
|
|
.for f in TPCsignal Dsignal *.cm gcode.*
|
|
${INSTALL_DATA} ${WRKSRC}/${f} ${DATADIR}
|
|
.endfor
|
|
|
|
.include <bsd.port.options.mk>
|
|
|
|
#
|
|
# have to install before testing as path to data files is hardcoded
|
|
#
|
|
post-install:
|
|
@ cd ${WRKSRC} && ${MAKE} testrun
|
|
.if ${PORT_OPTIONS:MDOCS}
|
|
@${MKDIR} ${DOCSDIR}
|
|
${INSTALL_DATA} ${WRKSRC}/Manual.ps ${DOCSDIR}
|
|
.endif
|
|
|
|
.include <bsd.port.mk>
|