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applications programming interface (API) to the NEXUS file format of Maddison, et al., 1997 (Syst. Biol. 46:590-621). NEXUS is a powerful and extensible format designed for use in evolutionary analysis, including the analysis of molecular sequence data as well as classical morphological and life-history data. NEXUS is the input or output format for software such as PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and so on. This package also contains the demonstration applications nexplot.pl (plot character data with a tree) and nextool.pl (allowing programmatic editing, e.g., selecting particular clades or subsets of data). WWW: http://search.cpan.org/dist/Bio-NEXUS/ PR: ports/137983 Submitted by: Wen Heping <wenheping at gmail.com>
15 lines
745 B
Plaintext
15 lines
745 B
Plaintext
Bio::NEXUS package provides an object-oriented, Perl-based
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applications programming interface (API) to the NEXUS file
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format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
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NEXUS is a powerful and extensible format designed for use
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in evolutionary analysis, including the analysis of molecular
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|
sequence data as well as classical morphological and life-history
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data. NEXUS is the input or output format for software such as
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PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
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so on. This package also contains the demonstration applications
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|
nexplot.pl (plot character data with a tree) and nextool.pl
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(allowing programmatic editing, e.g., selecting particular
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clades or subsets of data).
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WWW: http://search.cpan.org/dist/Bio-NEXUS/
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