Tijl Coosemans 564a799c71 Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes". In most cases ... USE_GCC=yes has been omitted though. Remove USE_FORTRAN handling from bsd.port.mk and bsd.gcc.mk. Minor cleanups in some ports like USE_GMAKE, NOPORTDOCS,... Exp-run: bdrewery Approved by: portmgr (bdrewery)		2014-02-16 17:15:31 +00:00
..
ariadne
artemis
avida
babel
biococoa
biojava	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
blast
blat
boinc-simap
chemeq
clustalw
consed	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
crux	Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes". In most cases	2014-02-16 17:15:31 +00:00
embassy
emboss
fasta
fasta3
fastdnaml	Support staging	2014-02-16 11:32:43 +00:00
finchtv	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
fluctuate	Support staging	2014-02-16 11:35:00 +00:00
garlic
genpak	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc
libgenome
libsbml
linux-foldingathome
mafft
mapm3
migrate
molden
mopac
mrbayes
mummer	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
muscle
ncbi-toolkit
njplot	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
ortep3
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
p5-bioperl-run	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
paml	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
phd2fasta
phrap
phred
phylip
phyml
platon
plink	Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes". In most cases	2014-02-16 17:15:31 +00:00
plinkseq
povchem
primer3
protomol
psi88
py-biopython
pycogent
pyfasta
pymol
python-nexus
rasmol
recombine	- Support staging	2014-02-16 11:39:42 +00:00
ruby-bio
seaview
seqan
seqio	Support staging	2014-02-16 11:42:09 +00:00
seqtools	Fix old makeplist bug.	2014-02-12 14:03:25 +00:00
sim4	Support staging	2014-02-16 11:43:07 +00:00
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
ugene
velvet	According to the Porter's Handbook (5.12.2.3.) default options must be added to	2014-02-10 13:54:26 +00:00
wise
xmolwt
Makefile