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b05bfa64b5
freebsd-ports/science
History
Thierry Thomas a75c0a02b7 Chase the upgrade of science/cgnslib to 2.5-5; this implies to 
switch some dependencies from science/hdf5 to science/hdf5-18.

As a side note: I think that all ports depending on science/hdf5
could be switched to science/hdf5-18, by defining H5_USE_16_API
when necessary, and then science/hdf5 could be deprecated.

PR:		ports/154736
2011-02-26 10:23:19 +00:00
..
2d-rewriter
2dhf
abinit Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
afni
at
avogadro
bblimage
bddsolve
bft Make fetchable again. 2010-09-29 19:33:17 +00:00
bodr
brian - Update to 1.3.0 2011-02-21 00:25:05 +00:00
buddy Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
cdcl
cdf
cdo - Do not run cdotest on 6.x 2010-10-21 06:44:18 +00:00
cgnslib - Upgrade to 2.5-5. 2011-02-26 10:23:14 +00:00
checkmol - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
chemical-mime-data
chemtool
chemtool-devel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
clhep - Update to 2.1.0.1 2010-11-13 11:13:13 +00:00
colt - Fix fetch error 2011-01-16 01:37:19 +00:00
crf++ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
dcl
devisor
dtiquery
ecs Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
elmer-eio
elmer-fem Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
elmer-hutiter Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
euler
fastcap
fasthenry
felt
flounder
fvm Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
g3data Drop maintainership for ports I can't maintain anymore. 2010-10-25 20:09:06 +00:00
gamess NO_CDROM is redundant when RESTRICTED is set. 2011-01-24 03:54:45 +00:00
gave
gchemutils Chase the goffice and gnumeric versions. 2010-11-29 06:01:08 +00:00
gdis
gerris
getdp
ghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
ghmm Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gnudatalanguage Mark BROKEN only with the old binutils. 2010-09-27 20:14:38 +00:00
gramps - Fix plist and unbreak - do not overwrite file installed by shared-mime-info 2010-12-09 14:43:26 +00:00
gromacs - change MAINTAINER to my @FreeBSD.org address 2010-12-27 22:02:09 +00:00
gsmc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gsystem
gtamsanalyzer
gwyddion
harminv
hdf
hdf5 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
hdf5-18 - Update to 1.8.5 patch 1 2011-01-09 11:00:35 +00:00
hdf-java Fix configure when HDF was built with SZIP support [1] 2010-11-04 13:05:36 +00:00
hs-bio - Add DIST_SUBDIR for Haskell Cabal ports (with default of "cabal") 2010-08-08 08:49:38 +00:00
ics - Fix build with new tix 2010-12-06 21:05:20 +00:00
InsightToolkit
isaac-cfd
jmol
jstrack
kmovisto
kst - Bump PORTREVISION to chase the update of astro/cfitsio 2011-01-05 06:58:15 +00:00
kst2 - Bump PORTREVISION to chase the update of astro/cfitsio 2011-01-05 06:58:15 +00:00
lamprop
libctl Mark BROKEN: does not build 2011-02-25 09:30:06 +00:00
libghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libint
libkml
liblinear - Update to 1.7 2010-09-13 14:02:28 +00:00
liboglappth - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libquantum Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
libsvm - Use INSTALL_LIB when installing shared lib and create symlink so configure 2010-11-10 14:06:44 +00:00
libsvm-python
linsmith
massxpert
mayavi
mbdyn Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mcstas - Update to 1.12b 2010-08-22 03:31:54 +00:00
medit Upgrade to 2010.06.14, aka 3.0a. 2010-10-17 14:45:12 +00:00
meep Clean up "current" versions of autotools components to further reduce 2010-12-08 19:58:49 +00:00
minc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
minc2 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
mol2ps - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
mpb
mpqc Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mpqc-mpich
ncs Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
netcdf - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
netcdf3-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
netcdf4 - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
netcdf-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
nifticlib
oases
omnetpp
openbabel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
ovt
p5-Algorithm-SVMLight - only 13% of the p5- ports embed @comment $FreeBSD$: 2010-09-24 02:03:44 +00:00
p5-Chemistry-3DBuilder - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Bond-Find - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Canonicalize - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-Mopac - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMARTS - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMILES - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-VRML - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-XYZ - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-FormulaPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-InternalCoords - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Isotope - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mok - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Reaction - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Ring - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Geo-Coordinates-Converter - Update to 0.10 2011-02-14 03:04:29 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-PerlMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Physics-Unit Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
paje
paraview - Update to 3.8.1. 2010-12-17 15:42:56 +00:00
pcp
peekabot - Update to 0.8.4 2011-02-05 10:55:13 +00:00
pnetcdf Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
psi3
psychopy
py-biolccc Add new port science/py-biolccc: 2010-11-13 21:40:45 +00:00
py-DendroPy - Update to 3.7.1 2010-10-21 01:45:15 +00:00
py-h5py
py-hcluster
py-mdp - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-mlpy - Update to 2.2.2 2010-12-23 08:22:39 +00:00
py-netCDF4 - Update to 0.9.3 2010-10-29 01:41:56 +00:00
py-openbabel
py-paida
py-pydicom
py-scimath - Fix fetch 2011-02-22 01:15:35 +00:00
py-scipy - Move to py25 or above 2011-02-25 00:47:51 +00:00
pybrain
pycdf
pynn
pyvox
qcl
qtresistors
ruby-dcl
ruby-gphys
ruby-netcdf - Update to 0.6.5 2011-02-20 11:31:04 +00:00
silo Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
simlib
svmlight
szip Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
udunits - Update to 2.1.21 2011-02-04 19:46:12 +00:00
v_sim Fix build with gcc-4.5.2.20101118. 2010-11-25 17:54:06 +00:00
veusz - Move to py25 or above 2011-02-25 00:47:51 +00:00
vis5d+ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
vmd - Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh 2010-12-18 09:24:21 +00:00
x11iraf
xmakemol
xmds Purge 3 outdated, old-and-busted, versions of automake as part of 2010-09-23 00:40:50 +00:00
Makefile The SciMath project includes packages to support scientific and 2011-02-20 03:54:04 +00:00