mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-14 03:10:47 +00:00
ba4d5fa369
PR: 133099 Submitted by: Fernan Aguero <fernan.aguero@gmail.com> Approved by: maintainer
823 lines
22 KiB
Plaintext
823 lines
22 KiB
Plaintext
bin/bl2seq
|
|
bin/blastall
|
|
bin/blastcl3
|
|
bin/blastclust
|
|
bin/blastpgp
|
|
bin/copymat
|
|
bin/fastacmd
|
|
bin/formatdb
|
|
bin/formatrpsdb
|
|
bin/impala
|
|
bin/makemat
|
|
bin/megablast
|
|
bin/rpsblast
|
|
bin/seedtop
|
|
bin/taxblast
|
|
bin/asn2ff
|
|
bin/asn2gb
|
|
bin/asn2idx
|
|
bin/asn2xml
|
|
bin/asndhuff
|
|
bin/asntool
|
|
bin/checksub
|
|
bin/debruijn
|
|
bin/entrcmd
|
|
bin/fa2htgs
|
|
bin/findspl
|
|
bin/getmesh
|
|
bin/getpub
|
|
bin/ddv
|
|
bin/gil2bin
|
|
bin/idfetch
|
|
bin/indexpub
|
|
bin/makeset
|
|
bin/tbl2asn
|
|
bin/vecscreen
|
|
bin/demo_regexp
|
|
bin/demo_regexp_grep
|
|
bin/errhdr
|
|
bin/gene2xml
|
|
bin/ncbisort
|
|
bin/seqtest
|
|
bin/test_regexp
|
|
bin/Nentrez
|
|
bin/Psequin
|
|
bin/entrez2
|
|
bin/sbtedit
|
|
bin/udv
|
|
include/ncbi/connect/connect_export.h
|
|
include/ncbi/connect/ncbi_ansi_ext.h
|
|
include/ncbi/connect/ncbi_assert.h
|
|
include/ncbi/connect/ncbi_buffer.h
|
|
include/ncbi/connect/ncbi_comm.h
|
|
include/ncbi/connect/ncbi_config.h
|
|
include/ncbi/connect/ncbi_connection.h
|
|
include/ncbi/connect/ncbi_connector.h
|
|
include/ncbi/connect/ncbi_connssl.h
|
|
include/ncbi/connect/ncbi_connutil.h
|
|
include/ncbi/connect/ncbi_core.h
|
|
include/ncbi/connect/ncbi_core_c.h
|
|
include/ncbi/connect/ncbi_dispd.h
|
|
include/ncbi/connect/ncbi_file_connector.h
|
|
include/ncbi/connect/ncbi_ftp_connector.h
|
|
include/ncbi/connect/ncbi_gnutls.h
|
|
include/ncbi/connect/ncbi_heapmgr.h
|
|
include/ncbi/connect/ncbi_host_info.h
|
|
include/ncbi/connect/ncbi_host_infop.h
|
|
include/ncbi/connect/ncbi_http_connector.h
|
|
include/ncbi/connect/ncbi_lb.h
|
|
include/ncbi/connect/ncbi_lbsmd.h
|
|
include/ncbi/connect/ncbi_local.h
|
|
include/ncbi/connect/ncbi_memory_connector.h
|
|
include/ncbi/connect/ncbi_priv.h
|
|
include/ncbi/connect/ncbi_sendmail.h
|
|
include/ncbi/connect/ncbi_server_info.h
|
|
include/ncbi/connect/ncbi_server_infop.h
|
|
include/ncbi/connect/ncbi_service.h
|
|
include/ncbi/connect/ncbi_service_connector.h
|
|
include/ncbi/connect/ncbi_servicep.h
|
|
include/ncbi/connect/ncbi_socket.h
|
|
include/ncbi/connect/ncbi_socket_connector.h
|
|
include/ncbi/connect/ncbi_socket_unix.h
|
|
include/ncbi/connect/ncbi_socketp.h
|
|
include/ncbi/connect/ncbi_types.h
|
|
include/ncbi/connect/ncbi_util.h
|
|
include/ncbi/FSpCompat.h
|
|
include/ncbi/FullPath.h
|
|
include/ncbi/MoreCarbonAccessors.h
|
|
include/ncbi/MoreFilesExtras.h
|
|
include/ncbi/MoreFilesX.h
|
|
include/ncbi/Optimization.h
|
|
include/ncbi/OptimizationEnd.h
|
|
include/ncbi/PubStructAsn.h
|
|
include/ncbi/a2ferr.h
|
|
include/ncbi/a2ferrdf.h
|
|
include/ncbi/a2fstruc.h
|
|
include/ncbi/aacomp.h
|
|
include/ncbi/accentr.h
|
|
include/ncbi/accid1.h
|
|
include/ncbi/accutils.h
|
|
include/ncbi/acerdapi.h
|
|
include/ncbi/aceread.h
|
|
include/ncbi/actutils.h
|
|
include/ncbi/algorend.h
|
|
include/ncbi/alignloc.h
|
|
include/ncbi/alignmgr.h
|
|
include/ncbi/alignmgr2.h
|
|
include/ncbi/alignval.h
|
|
include/ncbi/aliparse.h
|
|
include/ncbi/aliread.h
|
|
include/ncbi/all.h
|
|
include/ncbi/allpub.h
|
|
include/ncbi/apparam.h
|
|
include/ncbi/asn.h
|
|
include/ncbi/asn2ff.h
|
|
include/ncbi/asn2ff6.h
|
|
include/ncbi/asn2ffg.h
|
|
include/ncbi/asn2ffp.h
|
|
include/ncbi/asn2gnbi.h
|
|
include/ncbi/asn2gnbk.h
|
|
include/ncbi/asn2gnbp.h
|
|
include/ncbi/asn2graphic.h
|
|
include/ncbi/asn2graphicp.h
|
|
include/ncbi/asnacces.h
|
|
include/ncbi/asnalign.h
|
|
include/ncbi/asnbibli.h
|
|
include/ncbi/asnblock.h
|
|
include/ncbi/asncode.h
|
|
include/ncbi/asnent2.h
|
|
include/ncbi/asnentgene.h
|
|
include/ncbi/asnfdef.h
|
|
include/ncbi/asnfeat.h
|
|
include/ncbi/asngbseq.h
|
|
include/ncbi/asngen.h
|
|
include/ncbi/asnid0.h
|
|
include/ncbi/asninsdseq.h
|
|
include/ncbi/asnloc.h
|
|
include/ncbi/asnmacro.h
|
|
include/ncbi/asnmdrs.h
|
|
include/ncbi/asnmedli.h
|
|
include/ncbi/asnmim.h
|
|
include/ncbi/asnmime.h
|
|
include/ncbi/asnmla.h
|
|
include/ncbi/asnmla2.h
|
|
include/ncbi/asnneten.h
|
|
include/ncbi/asnproj.h
|
|
include/ncbi/asnprt.h
|
|
include/ncbi/asnpub.h
|
|
include/ncbi/asnpubme.h
|
|
include/ncbi/asnres.h
|
|
include/ncbi/asnseq.h
|
|
include/ncbi/asnsset.h
|
|
include/ncbi/asnsubmt.h
|
|
include/ncbi/asntable.h
|
|
include/ncbi/asntax1.h
|
|
include/ncbi/asntax3.h
|
|
include/ncbi/asntaxon.h
|
|
include/ncbi/asntseq.h
|
|
include/ncbi/bandalgn.h
|
|
include/ncbi/binary.h
|
|
include/ncbi/biosrc.h
|
|
include/ncbi/blast.h
|
|
include/ncbi/blast_dust.h
|
|
include/ncbi/blastconcat.h
|
|
include/ncbi/blastconcatdef.h
|
|
include/ncbi/blastdef.h
|
|
include/ncbi/blastkar.h
|
|
include/ncbi/blastpat.h
|
|
include/ncbi/blastpri.h
|
|
include/ncbi/blfmtutl.h
|
|
include/ncbi/blocks.h
|
|
include/ncbi/blstspc.h
|
|
include/ncbi/blstxml.h
|
|
include/ncbi/bspview.h
|
|
include/ncbi/bxmlobj.h
|
|
include/ncbi/casn.h
|
|
include/ncbi/cdconfig.h
|
|
include/ncbi/cdd.h
|
|
include/ncbi/cddapi.h
|
|
include/ncbi/cddposutil.h
|
|
include/ncbi/cddutil.h
|
|
include/ncbi/cdentrez.h
|
|
include/ncbi/cdnewlib.h
|
|
include/ncbi/cdrgn.h
|
|
include/ncbi/cdrom.h
|
|
include/ncbi/cdromlib.h
|
|
include/ncbi/cn3d.h
|
|
include/ncbi/cn3dentr.h
|
|
include/ncbi/codon.h
|
|
include/ncbi/cn3dmain.h
|
|
include/ncbi/cn3dmesh.h
|
|
include/ncbi/cn3dmodl.h
|
|
include/ncbi/cn3dmsel.h
|
|
include/ncbi/cn3dmsg.h
|
|
include/ncbi/cn3dopen.h
|
|
include/ncbi/cn3dsave.h
|
|
include/ncbi/cn3dshim.h
|
|
include/ncbi/cn3dstyl.h
|
|
include/ncbi/cn3dxprt.h
|
|
include/ncbi/compo_heap.h
|
|
include/ncbi/compo_mode_condition.h
|
|
include/ncbi/composition_adjustment.h
|
|
include/ncbi/composition_constants.h
|
|
include/ncbi/corematx.h
|
|
include/ncbi/db_list.h
|
|
include/ncbi/ddvclick.h
|
|
include/ncbi/ddvcolor.h
|
|
include/ncbi/ddvcreate.h
|
|
include/ncbi/ddvgraph.h
|
|
include/ncbi/ddvmain.h
|
|
include/ncbi/ddvopen.h
|
|
include/ncbi/ddvpanel.h
|
|
include/ncbi/diagnost.h
|
|
include/ncbi/dlogutil.h
|
|
include/ncbi/document.h
|
|
include/ncbi/dotmatrx.h
|
|
include/ncbi/dotseq.h
|
|
include/ncbi/dotviewer.h
|
|
include/ncbi/drawingp.h
|
|
include/ncbi/drawseq.h
|
|
include/ncbi/dust.h
|
|
include/ncbi/dvncode.h
|
|
include/ncbi/edutil.h
|
|
include/ncbi/egkludge.h
|
|
include/ncbi/ent2api.h
|
|
include/ncbi/entrez.h
|
|
include/ncbi/entrez2.h
|
|
include/ncbi/errdefn.h
|
|
include/ncbi/explore.h
|
|
include/ncbi/fastadl.h
|
|
include/ncbi/fdlKludge.h
|
|
include/ncbi/fdlobj.h
|
|
include/ncbi/fea2seg.h
|
|
include/ncbi/ffprint.h
|
|
include/ncbi/findrepl.h
|
|
include/ncbi/fstyle.h
|
|
include/ncbi/fstylep.h
|
|
include/ncbi/ftusrstr.h
|
|
include/ncbi/gapxdrop.h
|
|
include/ncbi/gather.h
|
|
include/ncbi/gbfeat.h
|
|
include/ncbi/gbftdef.h
|
|
include/ncbi/gbparlex.h
|
|
include/ncbi/id1.h
|
|
include/ncbi/gifgen.h
|
|
include/ncbi/glbpic.h
|
|
include/ncbi/gphdraw.h
|
|
include/ncbi/gtrdraw.h
|
|
include/ncbi/gxydraw.h
|
|
include/ncbi/id1arch.h
|
|
include/ncbi/id1gen.h
|
|
include/ncbi/id1map.h
|
|
include/ncbi/id2.h
|
|
include/ncbi/id2gen.h
|
|
include/ncbi/id2map.h
|
|
include/ncbi/id2sgen.h
|
|
include/ncbi/image.h
|
|
include/ncbi/imagelst.h
|
|
include/ncbi/import.h
|
|
include/ncbi/ingenext.h
|
|
include/ncbi/ingengraph.h
|
|
include/ncbi/ingenwin.h
|
|
include/ncbi/jsavlt.h
|
|
include/ncbi/jzcoll.h
|
|
include/ncbi/jzmisc.h
|
|
include/ncbi/layout.h
|
|
include/ncbi/legend.h
|
|
include/ncbi/list.h
|
|
include/ncbi/lnfac.h
|
|
include/ncbi/lookup.h
|
|
include/ncbi/lsqfetch.h
|
|
include/ncbi/macroapi.h
|
|
include/ncbi/macrodlg.h
|
|
include/ncbi/mapcn3d.h
|
|
include/ncbi/mapgene.h
|
|
include/ncbi/mapmime.h
|
|
include/ncbi/mapmla.h
|
|
include/ncbi/mappingp.h
|
|
include/ncbi/mapproj.h
|
|
include/ncbi/mappubme.h
|
|
include/ncbi/maputil.h
|
|
include/ncbi/matrix.h
|
|
include/ncbi/matrix_frequency_data.h
|
|
include/ncbi/mbalign.h
|
|
include/ncbi/mblast.h
|
|
include/ncbi/mconsist.h
|
|
include/ncbi/mdrcherr.h
|
|
include/ncbi/medarch.h
|
|
include/ncbi/medutil.h
|
|
include/ncbi/medview.h
|
|
include/ncbi/mimapi.h
|
|
include/ncbi/mkbioseq.h
|
|
include/ncbi/mmdb1.h
|
|
include/ncbi/mla2api.h
|
|
include/ncbi/mlkludge.h
|
|
include/ncbi/mmdb2.h
|
|
include/ncbi/mmdb3.h
|
|
include/ncbi/mmdbapi.h
|
|
include/ncbi/mmdbapi1.h
|
|
include/ncbi/mmdbapi2.h
|
|
include/ncbi/mmdbapi3.h
|
|
include/ncbi/mmdbapi4.h
|
|
include/ncbi/mmdbdata.h
|
|
include/ncbi/mmdblocl.h
|
|
include/ncbi/motif.h
|
|
include/ncbi/ncbi.h
|
|
include/ncbi/ncbibs.h
|
|
include/ncbi/ncbidraw.h
|
|
include/ncbi/ncbienv.h
|
|
include/ncbi/ncbierr.h
|
|
include/ncbi/ncbifile.h
|
|
include/ncbi/ncbigif.h
|
|
include/ncbi/ncbilang.h
|
|
include/ncbi/ncbilcl.h
|
|
include/ncbi/ncbimain.h
|
|
include/ncbi/ncbimath.h
|
|
include/ncbi/ncbimem.h
|
|
include/ncbi/ncbimisc.h
|
|
include/ncbi/ncbimsg.h
|
|
include/ncbi/ncbinet.h
|
|
include/ncbi/ncbiopt.h
|
|
include/ncbi/ncbiport.h
|
|
include/ncbi/ncbiprop.h
|
|
include/ncbi/ncbisam.h
|
|
include/ncbi/ncbisami.h
|
|
include/ncbi/ncbisgml.h
|
|
include/ncbi/ncbisort.h
|
|
include/ncbi/ncbisrti.h
|
|
include/ncbi/ncbistd.h
|
|
include/ncbi/ncbistr.h
|
|
include/ncbi/ncbithr.h
|
|
include/ncbi/ncbitime.h
|
|
include/ncbi/ncbiwin.h
|
|
include/ncbi/ncbiwww.h
|
|
include/ncbi/needleman.h
|
|
include/ncbi/netblap3.h
|
|
include/ncbi/netcnfg.h
|
|
include/ncbi/netentr.h
|
|
include/ncbi/netlib.h
|
|
include/ncbi/netpriv.h
|
|
include/ncbi/netscape.h
|
|
include/ncbi/ni_defin.h
|
|
include/ncbi/ni_error.h
|
|
include/ncbi/ni_lib.h
|
|
include/ncbi/ni_lib_.h
|
|
include/ncbi/ni_net.h
|
|
include/ncbi/ni_types.h
|
|
include/ncbi/nlm_linear_algebra.h
|
|
include/ncbi/objacces.h
|
|
include/ncbi/objalign.h
|
|
include/ncbi/objalignloc.h
|
|
include/ncbi/objall.h
|
|
include/ncbi/objbibli.h
|
|
include/ncbi/objblock.h
|
|
include/ncbi/objblst3.h
|
|
include/ncbi/objcdd.h
|
|
include/ncbi/objcn3d.h
|
|
include/ncbi/objcode.h
|
|
include/ncbi/objegkludge.h
|
|
include/ncbi/objent2.h
|
|
include/ncbi/objentgene.h
|
|
include/ncbi/objentr.h
|
|
include/ncbi/objfdef.h
|
|
include/ncbi/objfeat.h
|
|
include/ncbi/objgbseq.h
|
|
include/ncbi/objgen.h
|
|
include/ncbi/objinsdseq.h
|
|
include/ncbi/objloc.h
|
|
include/ncbi/objmacro.h
|
|
include/ncbi/objmdrs.h
|
|
include/ncbi/objmedli.h
|
|
include/ncbi/objmgr.h
|
|
include/ncbi/objmim.h
|
|
include/ncbi/objmime.h
|
|
include/ncbi/objmla.h
|
|
include/ncbi/objmla2.h
|
|
include/ncbi/objmmdb1.h
|
|
include/ncbi/objmmdb2.h
|
|
include/ncbi/objmmdb3.h
|
|
include/ncbi/objneten.h
|
|
include/ncbi/objproj.h
|
|
include/ncbi/objprt.h
|
|
include/ncbi/objpub.h
|
|
include/ncbi/objpubd.h
|
|
include/ncbi/objpubme.h
|
|
include/ncbi/objres.h
|
|
include/ncbi/objscoremat.h
|
|
include/ncbi/objseq.h
|
|
include/ncbi/objspell.h
|
|
include/ncbi/objsset.h
|
|
include/ncbi/objsub.h
|
|
include/ncbi/objtable.h
|
|
include/ncbi/objtax1.h
|
|
include/ncbi/objtax3.h
|
|
include/ncbi/objtseq.h
|
|
include/ncbi/odlbox.h
|
|
include/ncbi/optimize_target_freq.h
|
|
include/ncbi/panels.h
|
|
include/ncbi/parsegb.h
|
|
include/ncbi/pcre.h
|
|
include/ncbi/pcre_config.h
|
|
include/ncbi/pcre_internal.h
|
|
include/ncbi/pcreposix.h
|
|
include/ncbi/pdiagnos.h
|
|
include/ncbi/pgppop.h
|
|
include/ncbi/pictur3d.h
|
|
include/ncbi/picture.h
|
|
include/ncbi/picturep.h
|
|
include/ncbi/pmfapi.h
|
|
include/ncbi/pobutil.h
|
|
include/ncbi/posit.h
|
|
include/ncbi/ppict3d.h
|
|
include/ncbi/profiles.h
|
|
include/ncbi/prtgene.h
|
|
include/ncbi/prtutil.h
|
|
include/ncbi/prunebsc.h
|
|
include/ncbi/pubdesc.h
|
|
include/ncbi/puberr.h
|
|
include/ncbi/qblastapi.h
|
|
include/ncbi/readdb.h
|
|
include/ncbi/redo_alignment.h
|
|
include/ncbi/regex.h
|
|
include/ncbi/rpsutil.h
|
|
include/ncbi/saldist.h
|
|
include/ncbi/saled.h
|
|
include/ncbi/saledit.h
|
|
include/ncbi/salfiles.h
|
|
include/ncbi/salign.h
|
|
include/ncbi/salmedia.h
|
|
include/ncbi/salogif.h
|
|
include/ncbi/salpacc.h
|
|
include/ncbi/salpanel.h
|
|
include/ncbi/salparam.h
|
|
include/ncbi/salpedit.h
|
|
include/ncbi/salprop.h
|
|
include/ncbi/salpstat.h
|
|
include/ncbi/salptool.h
|
|
include/ncbi/salsa.h
|
|
include/ncbi/salsap.h
|
|
include/ncbi/salstruc.h
|
|
include/ncbi/salutil.h
|
|
include/ncbi/samutil.h
|
|
include/ncbi/satutil.h
|
|
include/ncbi/scoremat.h
|
|
include/ncbi/sdisplay.h
|
|
include/ncbi/sec.h
|
|
include/ncbi/seed.h
|
|
include/ncbi/seg.h
|
|
include/ncbi/seqanal.h
|
|
include/ncbi/seqcons.h
|
|
include/ncbi/seqfltr.h
|
|
include/ncbi/seqgraph.h
|
|
include/ncbi/seqgrphx.h
|
|
include/ncbi/seqmgr.h
|
|
include/ncbi/seqmtrx.h
|
|
include/ncbi/seqpanel.h
|
|
include/ncbi/seqpcc.h
|
|
include/ncbi/seqport.h
|
|
include/ncbi/seqscrl.h
|
|
include/ncbi/seqsplit.h
|
|
include/ncbi/seqsub.h
|
|
include/ncbi/sequtil.h
|
|
include/ncbi/shim3d.h
|
|
include/ncbi/showalignwrap.h
|
|
include/ncbi/simple.h
|
|
include/ncbi/simutil.h
|
|
include/ncbi/smith_waterman.h
|
|
include/ncbi/spell.h
|
|
include/ncbi/spellapi.h
|
|
include/ncbi/spidey.h
|
|
include/ncbi/splutil.h
|
|
include/ncbi/sqnutils.h
|
|
include/ncbi/strimprt.h
|
|
include/ncbi/strucapi.h
|
|
include/ncbi/stsutil.h
|
|
include/ncbi/subutil.h
|
|
include/ncbi/suggapi.h
|
|
include/ncbi/suggen.h
|
|
include/ncbi/suggest.h
|
|
include/ncbi/suggslp.h
|
|
include/ncbi/sugmap.h
|
|
include/ncbi/terr.h
|
|
include/ncbi/sugprefx.h
|
|
include/ncbi/tax1map.h
|
|
include/ncbi/tax3api.h
|
|
include/ncbi/taxblast.h
|
|
include/ncbi/taxext.h
|
|
include/ncbi/taxinc.h
|
|
include/ncbi/taxon1.h
|
|
include/ncbi/taxuerr.h
|
|
include/ncbi/taxutil.h
|
|
include/ncbi/tfuns.h
|
|
include/ncbi/thrdatd.h
|
|
include/ncbi/thrddecl.h
|
|
include/ncbi/toasn3.h
|
|
include/ncbi/tofasta.h
|
|
include/ncbi/tofile.h
|
|
include/ncbi/tomedlin.h
|
|
include/ncbi/toporg.h
|
|
include/ncbi/tree.h
|
|
include/ncbi/treemgr.h
|
|
include/ncbi/treeview.h
|
|
include/ncbi/treevint.h
|
|
include/ncbi/tsprintf.h
|
|
include/ncbi/txalign.h
|
|
include/ncbi/txclient.h
|
|
include/ncbi/txcommon.h
|
|
include/ncbi/udvdef.h
|
|
include/ncbi/udviewer.h
|
|
include/ncbi/udvseq.h
|
|
include/ncbi/undefwin.h
|
|
include/ncbi/unified_pvalues.h
|
|
include/ncbi/urkbias.h
|
|
include/ncbi/urkcnsrt.h
|
|
include/ncbi/urkdust.h
|
|
include/ncbi/urkepi.h
|
|
include/ncbi/urkfltr.h
|
|
include/ncbi/urkgraph.h
|
|
include/ncbi/urkpcc.h
|
|
include/ncbi/urkptpf.h
|
|
include/ncbi/urksigu.h
|
|
include/ncbi/urktree.h
|
|
include/ncbi/urkutil.h
|
|
include/ncbi/urlquery.h
|
|
include/ncbi/utilpars.h
|
|
include/ncbi/utilpub.h
|
|
include/ncbi/valid.h
|
|
include/ncbi/validatr.h
|
|
include/ncbi/validerr.h
|
|
include/ncbi/vast2cn3d.h
|
|
include/ncbi/vast2mage.h
|
|
include/ncbi/vast2pdb.h
|
|
include/ncbi/vastlocl.h
|
|
include/ncbi/vastsrv.h
|
|
include/ncbi/vsm.h
|
|
include/ncbi/vecscnapi.h
|
|
include/ncbi/vecscrn.h
|
|
include/ncbi/vibdefns.h
|
|
include/ncbi/vibfltr.h
|
|
include/ncbi/vibforms.h
|
|
include/ncbi/vibgraph.h
|
|
include/ncbi/vibincld.h
|
|
include/ncbi/vibmain.h
|
|
include/ncbi/vibmouse.h
|
|
include/ncbi/vibpcc.h
|
|
include/ncbi/vibprocs.h
|
|
include/ncbi/vibrant.h
|
|
include/ncbi/vibrgb.h
|
|
include/ncbi/vibtree.h
|
|
include/ncbi/vibtypes.h
|
|
include/ncbi/viewer.h
|
|
include/ncbi/viewer3d.h
|
|
include/ncbi/viewerp.h
|
|
include/ncbi/viewmgr.h
|
|
include/ncbi/vsmfile.h
|
|
include/ncbi/vsmpriv.h
|
|
include/ncbi/vsmutil.h
|
|
include/ncbi/wwwblast.h
|
|
include/ncbi/xmlblast.h
|
|
lib/ncbi/libblast.a
|
|
lib/ncbi/libblastapi.a
|
|
lib/ncbi/libblastcompadj.a
|
|
lib/ncbi/libddvlib.a
|
|
lib/ncbi/libncbi.a
|
|
lib/ncbi/libncbiCacc.a
|
|
lib/ncbi/libncbiNacc.a
|
|
lib/ncbi/libncbiacc.a
|
|
lib/ncbi/libncbicdr.a
|
|
lib/ncbi/libncbicn3d.a
|
|
lib/ncbi/libncbidesk.a
|
|
lib/ncbi/libncbiid1.a
|
|
lib/ncbi/libncbimla.a
|
|
lib/ncbi/libncbimmdb.a
|
|
lib/ncbi/libncbiobj.a
|
|
lib/ncbi/libncbitool.a
|
|
lib/ncbi/libncbitxc2.a
|
|
lib/ncbi/libnetblast.a
|
|
lib/ncbi/libnetcli.a
|
|
lib/ncbi/libnetentr.a
|
|
lib/ncbi/libregexp.a
|
|
lib/ncbi/libvibgif.a
|
|
lib/ncbi/libvibnet.a
|
|
lib/ncbi/libvibrant.a
|
|
%%PORTDOCS%%%%DOCSDIR%%/FAQ.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/README.asn2xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/README.sdk
|
|
%%PORTDOCS%%%%DOCSDIR%%/access.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/asn2gb.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/asn2gph.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blastclust.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/bl2seq.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blast.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blastall.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blastdb.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blastftp.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/blastpgp.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/fastacmd.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/filter.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/formatdb.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/formatrpsdb.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/history.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/impala.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/index.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/megablast.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/netblast.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/rpsblast.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/scoring.pdf
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/seedtop.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/blast/web_blast.pl
|
|
%%PORTDOCS%%%%DOCSDIR%%/dispatcher.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/fa2htgs/README
|
|
%%PORTDOCS%%%%DOCSDIR%%/fa2htgs/updateHtgsDoc
|
|
%%PORTDOCS%%%%DOCSDIR%%/firedialog.gif
|
|
%%PORTDOCS%%%%DOCSDIR%%/firewall.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/fwd_check.sh
|
|
%%PORTDOCS%%%%DOCSDIR%%/gene2xml.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/logo.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/affil.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/annot.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/authors.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/cds_edit.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/contact.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/desktop.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/format.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/genbank.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/graphic.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/loc_page.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/ncbi_sequin.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/net_cfg.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/nucaln.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/nucset.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/nucsing1.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/nucsing2.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/organism.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/props_pg.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/protein1.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/protein2.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/sequence.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/submit.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/update.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/validate.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/images/welcome.png
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/Psequin.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2all.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2asn.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2ff.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2fsa.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2gb.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2idx.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asn2xml.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asndhuff.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asntool.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/asnval.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/bl2seq.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blast.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blastall.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blastall_old.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blastcl3.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blastclust.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/blastpgp.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/cdscan.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/checksub.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/cleanasn.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/copymat.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/ddv.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/debruijn.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/entrez2.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/errhdr.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/vecscreen.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/fa2htgs.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/fastacmd.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/findspl.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/fmerge.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/formatdb.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/getpub.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/formatrpsdb.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/gbseqget.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/gene2xml.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/getmesh.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/gil2bin.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/idfetch.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/impala.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/indexpub.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/insdseqget.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/makemat.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/makeset.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/megablast.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/nps2gps.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/rpsblast.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/sbtedit.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/seedtop.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/sortbyquote.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/spidey.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/tbl2asn.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/trna2sap.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/trna2tbl.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/man/udv.1
|
|
%%PORTDOCS%%%%DOCSDIR%%/ncbixml.txt
|
|
%%PORTDOCS%%%%DOCSDIR%%/sdk.doc
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/ftp_example.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/Makefile
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/bg.gif
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_ftp_download.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/ftp_example.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/left.GIF
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/mac-ie.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/mac-netscape.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/main.xslt
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/ncbi_sequin.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_download.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_download.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_download.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_ftp_download.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_ftp_download.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_install.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_mac_download.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_mac_download.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/sniff.js
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_mac_download.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_trouble.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_trouble.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_trouble.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_unix_download.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_unix_download.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_unix_download.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_win_download.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_win_download.html
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/seq_win_download.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/sequin-icon-win.gif
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/spacer10.GIF
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/template.xml
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/win-ie.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/win-ie3.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/seq_install/win-netscape.css
|
|
%%PORTDOCS%%%%DOCSDIR%%/sequin.htm
|
|
%%PORTDOCS%%%%DOCSDIR%%/tbl2asn.txt
|
|
%%DATADIR%%/16SCore.nhr
|
|
%%DATADIR%%/16SCore.nin
|
|
%%DATADIR%%/16SCore.nsq
|
|
%%DATADIR%%/BLOSUM45
|
|
%%DATADIR%%/BLOSUM50
|
|
%%DATADIR%%/BLOSUM62
|
|
%%DATADIR%%/BLOSUM80
|
|
%%DATADIR%%/BLOSUM90
|
|
%%DATADIR%%/Combined16SrRNA.nhr
|
|
%%DATADIR%%/Combined16SrRNA.nin
|
|
%%DATADIR%%/Combined16SrRNA.nsq
|
|
%%DATADIR%%/Combined16SrRNA_2-12-2008.nhr
|
|
%%DATADIR%%/Combined16SrRNA_2-12-2008.nin
|
|
%%DATADIR%%/Combined16SrRNA_2-12-2008.nsq
|
|
%%DATADIR%%/ContactPotential
|
|
%%DATADIR%%/KSat.flt
|
|
%%DATADIR%%/KSchoth.flt
|
|
%%DATADIR%%/KSesigc.mat
|
|
%%DATADIR%%/KSesigl.mat
|
|
%%DATADIR%%/PAM250
|
|
%%DATADIR%%/KSgc.flt
|
|
%%DATADIR%%/KShopp.flt
|
|
%%DATADIR%%/KSkyte.flt
|
|
%%DATADIR%%/KSmtidk.mat
|
|
%%DATADIR%%/KSmtk.mat
|
|
%%DATADIR%%/KSnsigc.mat
|
|
%%DATADIR%%/KSnsigl.mat
|
|
%%DATADIR%%/KSpcc.mat
|
|
%%DATADIR%%/KSpsigc.mat
|
|
%%DATADIR%%/KSpsigl.mat
|
|
%%DATADIR%%/KSpur.flt
|
|
%%DATADIR%%/KSpyr.flt
|
|
%%DATADIR%%/LSURef_93.fasta.nhr
|
|
%%DATADIR%%/LSURef_93.fasta.nin
|
|
%%DATADIR%%/LSURef_93.fasta.nsq
|
|
%%DATADIR%%/PAM30
|
|
%%DATADIR%%/PAM70
|
|
%%DATADIR%%/SSURef_93.fasta.nhr
|
|
%%DATADIR%%/SSURef_93.fasta.nin
|
|
%%DATADIR%%/SSURef_93.fasta.nsq
|
|
%%DATADIR%%/UniVec.nhr
|
|
%%DATADIR%%/UniVec.nin
|
|
%%DATADIR%%/UniVec.nsq
|
|
%%DATADIR%%/UniVec_Core.nhr
|
|
%%DATADIR%%/UniVec_Core.nin
|
|
%%DATADIR%%/UniVec_Core.nsq
|
|
%%DATADIR%%/asn2ff.prt
|
|
%%DATADIR%%/blast.prt
|
|
%%DATADIR%%/bstdt.prt
|
|
%%DATADIR%%/bstdt.val
|
|
%%DATADIR%%/country_lat_lon.txt
|
|
%%DATADIR%%/ecnum_ambiguous.txt
|
|
%%DATADIR%%/ecnum_deleted.txt
|
|
%%DATADIR%%/ecnum_replaced.txt
|
|
%%DATADIR%%/ecnum_specific.txt
|
|
%%DATADIR%%/featdef.prt
|
|
%%DATADIR%%/featdef.val
|
|
%%DATADIR%%/gc.prt
|
|
%%DATADIR%%/gc.val
|
|
%%DATADIR%%/humrep.fsa
|
|
%%DATADIR%%/institution_codes.txt
|
|
%%DATADIR%%/lineages.txt
|
|
%%DATADIR%%/makerpt.prt
|
|
%%DATADIR%%/ncbiendo.dat
|
|
%%DATADIR%%/ncbipnam.dat
|
|
%%DATADIR%%/ncbipros.dat
|
|
%%DATADIR%%/ncbiren.dat
|
|
%%DATADIR%%/ncbirnam.dat
|
|
%%DATADIR%%/objprt.prt
|
|
%%DATADIR%%/pubkey.enc
|
|
%%DATADIR%%/rRNA_blast.nal
|
|
%%DATADIR%%/rRNAstrand.nal
|
|
%%DATADIR%%/seqcode.prt
|
|
%%DATADIR%%/seqcode.val
|
|
%%DATADIR%%/sequin.hlp
|
|
%%DATADIR%%/sgmlbb.ent
|
|
%%DATADIR%%/taxlist.txt
|
|
@dirrm include/ncbi/connect
|
|
@dirrm include/ncbi
|
|
@dirrm lib/ncbi
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%/blast
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%/fa2htgs
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%/images
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%/man
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%/seq_install
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%
|
|
@dirrmtry %%DATADIR%%
|