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freebsd-ports/biology/primer3/pkg-plist
Edwin Groothuis 2e9537a130 Updated to fix problems as stated in PR ports/42915 
PR:		ports/42915
Submitted by:	Tony Maher <tonym@biolateral.com.au>
2002-11-07 13:45:17 +00:00

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%%PORTDOCS%%share/doc/primer3/README
%%PORTDOCS%%share/doc/primer3/example
%%PORTDOCS%%share/examples/primer3/dpal_gen.pl
%%PORTDOCS%%share/examples/primer3/dpal_input
%%PORTDOCS%%share/examples/primer3/dpal_long_input
%%PORTDOCS%%share/examples/primer3/dpal_long_score_output
%%PORTDOCS%%share/examples/primer3/dpal_output
%%PORTDOCS%%share/examples/primer3/dpal_score_output
%%PORTDOCS%%share/examples/primer3/dpal_test.pl
%%PORTDOCS%%share/examples/primer3/long_seq_input
%%PORTDOCS%%share/examples/primer3/long_seq_output
%%PORTDOCS%%share/examples/primer3/not_for_production.lib
%%PORTDOCS%%share/examples/primer3/primer1_input
%%PORTDOCS%%share/examples/primer3/primer1_list_last/AGAG.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/AGAG.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-02.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-02.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-03.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-03.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-06.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-06.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-19.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-19.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-21.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-21.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP04-07.txt.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP04-07.txt.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.int
%%PORTDOCS%%share/examples/primer3/primer1_list_last/long_seq.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/long_seq.rev
%%PORTDOCS%%share/examples/primer3/primer1_list_last/targets_test.for
%%PORTDOCS%%share/examples/primer3/primer1_list_last/targets_test.rev
%%PORTDOCS%%share/examples/primer3/primer1_output
%%PORTDOCS%%share/examples/primer3/primer_boundary1_formated_output
%%PORTDOCS%%share/examples/primer3/primer_boundary1_input
%%PORTDOCS%%share/examples/primer3/primer_boundary1_output
%%PORTDOCS%%share/examples/primer3/primer_boundary_formated_output
%%PORTDOCS%%share/examples/primer3/primer_boundary_input
%%PORTDOCS%%share/examples/primer3/primer_boundary_output
%%PORTDOCS%%share/examples/primer3/primer_check_input
%%PORTDOCS%%share/examples/primer3/primer_check_output
%%PORTDOCS%%share/examples/primer3/primer_end_pathology_input
%%PORTDOCS%%share/examples/primer3/primer_end_pathology_output
%%PORTDOCS%%share/examples/primer3/primer_global_err/MAX_PRIMER_LENGTH.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_dna_conc.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_4.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_4.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_salt_conc.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_product_size.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/gc_clamp_min_size.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/incorrect_task.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/io_gc_content_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/io_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_limit_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/mishyb_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/mispr_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/no=.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/no_terminal=.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size_int.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/pair_mispr.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/pr_gc_content_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/product_size_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/product_tm_obj_fn.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err4.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err5.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err6.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err4.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err5.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err6.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality1.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality2.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality3.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality4.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/too_many_product_sizes.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_min_size.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_num_return.in
%%PORTDOCS%%share/examples/primer3/primer_global_err/MAX_PRIMER_LENGTH.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_dna_conc.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_1.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_2.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_3.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_4.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_1.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_2.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_3.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_1.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_2.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_3.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_1.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_2.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_3.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_4.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_salt_conc.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_1.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_product_size.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/gc_clamp_min_size.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/incorrect_task.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/io_gc_content_obj_fn.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/io_obj_fn.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm.out
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%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_limit_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm.out
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%%PORTDOCS%%share/examples/primer3/primer_global_err/mishyb_obj_fn.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/mispr_obj_fn.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/no=.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/no_terminal=.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size_int.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size.out
%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size_int.out
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%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality1.out
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%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_num_return.out
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-03.txt.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-06-with-repeat1.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-06-with-repeat2.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-06-with-repeat3.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-19.txt.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP01-21.txt.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/SP04-07.txt.for
%%PORTDOCS%%share/examples/primer3/primer_list_last/SP04-07.txt.rev
%%PORTDOCS%%share/examples/primer3/primer_list_last/case_problem_test.for
%%PORTDOCS%%share/examples/primer3/primer_list_last/case_problem_test.rev
%%PORTDOCS%%share/examples/primer3/primer_list_last/included_test.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/included_test_w_middle.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/long_seq.for
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%%PORTDOCS%%share/examples/primer3/primer_list_last/targets_test.for
%%PORTDOCS%%share/examples/primer3/primer_list_last/targets_test.rev
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary1_formated_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary1_input
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary1_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary2_formated_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary2_input
%%PORTDOCS%%share/examples/primer3/primer_mispriming_boundary2_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_formated_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_input
%%PORTDOCS%%share/examples/primer3/primer_mispriming_long_lib_input
%%PORTDOCS%%share/examples/primer3/primer_mispriming_long_lib_output
%%PORTDOCS%%share/examples/primer3/primer_mispriming_output
%%PORTDOCS%%share/examples/primer3/primer_must_use_formated_output
%%PORTDOCS%%share/examples/primer3/primer_must_use_input
%%PORTDOCS%%share/examples/primer3/primer_must_use_output
%%PORTDOCS%%share/examples/primer3/primer_num_best_input
%%PORTDOCS%%share/examples/primer3/primer_num_best_output
%%PORTDOCS%%share/examples/primer3/primer_obj_fn_input
%%PORTDOCS%%share/examples/primer3/primer_obj_fn_output
%%PORTDOCS%%share/examples/primer3/primer_output
%%PORTDOCS%%share/examples/primer3/primer_position_penalty_formated_output
%%PORTDOCS%%share/examples/primer3/primer_position_penalty_input
%%PORTDOCS%%share/examples/primer3/primer_position_penalty_output
%%PORTDOCS%%share/examples/primer3/primer_quality_boundary_input
%%PORTDOCS%%share/examples/primer3/primer_quality_boundary_output
%%PORTDOCS%%share/examples/primer3/primer_rat_input
%%PORTDOCS%%share/examples/primer3/primer_rat_output
%%PORTDOCS%%share/examples/primer3/primer_repeat_boundary1_lib
%%PORTDOCS%%share/examples/primer3/primer_repeat_boundary2_lib
%%PORTDOCS%%share/examples/primer3/primer_repeat_long_lib
%%PORTDOCS%%share/examples/primer3/primer_start_codon_input
%%PORTDOCS%%share/examples/primer3/primer_start_codon_output
%%PORTDOCS%%share/examples/primer3/primer_syntax_input
%%PORTDOCS%%share/examples/primer3/primer_syntax_output
%%PORTDOCS%%share/examples/primer3/primer_task_formated_output
%%PORTDOCS%%share/examples/primer3/primer_task_input
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%%PORTDOCS%%share/examples/primer3/primer_test.pl
%%PORTDOCS%%share/examples/primer3/repeat_lib1
%%PORTDOCS%%share/examples/primer3/repeat_lib2
%%PORTDOCS%%share/examples/primer3/repeat_lib3
%%PORTDOCS%%share/examples/primer3/repeat_lib4
%%PORTDOCS%%share/examples/primer3/repeat_lib5
%%PORTDOCS%%share/examples/primer3/repeat_lib6
bin/primer3
share/primer3/Copyright
share/primer3/primer3_www.cgi
share/primer3/primer3_www_help.html
share/primer3/primer3_www_results.cgi
share/primer3/primer3_www_results_help.html
@dirrm share/primer3
%%PORTDOCS%%@dirrm share/doc/primer3/
%%PORTDOCS%%@dirrm share/examples/primer3/primer1_list_last
%%PORTDOCS%%@dirrm share/examples/primer3/primer_global_err
%%PORTDOCS%%@dirrm share/examples/primer3/primer_list_last
%%PORTDOCS%%@dirrm share/examples/primer3/
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