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org-mode/lisp/ob-perl.el

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;;; ob-perl.el --- org-babel functions for perl evaluation
;; Copyright (C) 2009-2014 Free Software Foundation, Inc.
2012-04-01 22:53:28 +00:00
;; Authors: Dan Davison
;; Eric Schulte
;; Keywords: literate programming, reproducible research
;; Homepage: http://orgmode.org
;; This file is part of GNU Emacs.
;; GNU Emacs is free software: you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation, either version 3 of the License, or
;; (at your option) any later version.
;; GNU Emacs is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
;;; Commentary:
;; Org-Babel support for evaluating perl source code.
;;; Code:
(require 'ob)
(eval-when-compile (require 'cl))
(defvar org-babel-tangle-lang-exts)
(add-to-list 'org-babel-tangle-lang-exts '("perl" . "pl"))
(defvar org-babel-default-header-args:perl '())
(defvar org-babel-perl-command "perl"
"Name of command to use for executing perl code.")
(defun org-babel-execute:perl (body params)
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"Execute a block of Perl code with Babel.
This function is called by `org-babel-execute-src-block'."
babel:removing calls to ob-process-params, and updating use of results * lisp/ob-C.el (org-babel-C-execute): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-R.el (org-babel-execute:R): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-R-variable-assignments): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-asymptote.el (org-babel-execute:asymptote): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-clojure.el (org-babel-execute:clojure): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-dot.el (org-babel-execute:dot): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-execute:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-haskell.el (org-babel-execute:haskell): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-js.el (org-babel-execute:js): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-lisp.el (org-babel-execute:lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ocaml.el (org-babel-execute:ocaml): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-octave.el (org-babel-execute:octave): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-perl.el (org-babel-execute:perl): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-python.el (org-babel-execute:python): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ruby.el (org-babel-execute:ruby): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-scheme.el (org-babel-execute:scheme): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-screen.el (org-babel-execute:screen): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-prep-session:screen): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sh.el (org-babel-execute:sh): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sql.el (org-babel-execute:sql): removing call to org-babel-process-params which should no longer be called from within a language file * ob-haskell.el (org-babel-execute:haskell): Remove reference to processed params * ob-clojure.el (org-babel-execute:clojure): Remove reference to processed params * ob-R.el (org-babel-execute:R): Remove reference to processed params
2010-10-21 11:52:24 +00:00
(let* ((session (cdr (assoc :session params)))
(result-params (cdr (assoc :result-params params)))
(result-type (cdr (assoc :result-type params)))
(full-body (org-babel-expand-body:generic
body params (org-babel-variable-assignments:perl params)))
(session (org-babel-perl-initiate-session session)))
(org-babel-reassemble-table
(org-babel-perl-evaluate session full-body result-type result-params)
(org-babel-pick-name
babel:removing calls to ob-process-params, and updating use of results * lisp/ob-C.el (org-babel-C-execute): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-R.el (org-babel-execute:R): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-R-variable-assignments): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-asymptote.el (org-babel-execute:asymptote): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-clojure.el (org-babel-execute:clojure): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-dot.el (org-babel-execute:dot): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-execute:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-haskell.el (org-babel-execute:haskell): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-js.el (org-babel-execute:js): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-lisp.el (org-babel-execute:lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ocaml.el (org-babel-execute:ocaml): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-octave.el (org-babel-execute:octave): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-perl.el (org-babel-execute:perl): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-python.el (org-babel-execute:python): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ruby.el (org-babel-execute:ruby): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-scheme.el (org-babel-execute:scheme): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-screen.el (org-babel-execute:screen): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-prep-session:screen): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sh.el (org-babel-execute:sh): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sql.el (org-babel-execute:sql): removing call to org-babel-process-params which should no longer be called from within a language file * ob-haskell.el (org-babel-execute:haskell): Remove reference to processed params * ob-clojure.el (org-babel-execute:clojure): Remove reference to processed params * ob-R.el (org-babel-execute:R): Remove reference to processed params
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(cdr (assoc :colname-names params)) (cdr (assoc :colnames params)))
(org-babel-pick-name
babel:removing calls to ob-process-params, and updating use of results * lisp/ob-C.el (org-babel-C-execute): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-R.el (org-babel-execute:R): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-R-variable-assignments): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-asymptote.el (org-babel-execute:asymptote): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-clojure.el (org-babel-execute:clojure): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-dot.el (org-babel-execute:dot): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-execute:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-haskell.el (org-babel-execute:haskell): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-js.el (org-babel-execute:js): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-lisp.el (org-babel-execute:lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ocaml.el (org-babel-execute:ocaml): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-octave.el (org-babel-execute:octave): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-perl.el (org-babel-execute:perl): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-python.el (org-babel-execute:python): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ruby.el (org-babel-execute:ruby): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-scheme.el (org-babel-execute:scheme): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-screen.el (org-babel-execute:screen): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-prep-session:screen): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sh.el (org-babel-execute:sh): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sql.el (org-babel-execute:sql): removing call to org-babel-process-params which should no longer be called from within a language file * ob-haskell.el (org-babel-execute:haskell): Remove reference to processed params * ob-clojure.el (org-babel-execute:clojure): Remove reference to processed params * ob-R.el (org-babel-execute:R): Remove reference to processed params
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(cdr (assoc :rowname-names params)) (cdr (assoc :rownames params))))))
(defun org-babel-prep-session:perl (session params)
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"Prepare SESSION according to the header arguments in PARAMS."
(error "Sessions are not supported for Perl"))
(defun org-babel-variable-assignments:perl (params)
"Return list of perl statements assigning the block's variables."
(mapcar
(lambda (pair)
(org-babel-perl--var-to-perl (cdr pair) (car pair)))
(mapcar #'cdr (org-babel-get-header params :var))))
;; helper functions
(defvar org-babel-perl-var-wrap "q(%s)"
"Wrapper for variables inserted into Perl code.")
(defvar org-babel-perl--lvl)
(defun org-babel-perl--var-to-perl (var &optional varn)
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"Convert an elisp value to a perl variable.
The elisp value, VAR, is converted to a string of perl source code
specifying a var of the same value."
(if varn
(let ((org-babel-perl--lvl 0) (lvar (listp var)) prefix)
(concat "my $" (symbol-name varn) "=" (when lvar "\n")
(org-babel-perl--var-to-perl var)
";\n"))
(let ((prefix (make-string (* 2 org-babel-perl--lvl) ?\ )))
(concat prefix
(if (listp var)
(let ((org-babel-perl--lvl (1+ org-babel-perl--lvl)))
(concat "[\n"
(mapconcat #'org-babel-perl--var-to-perl var "")
prefix "]"))
(format "q(%s)" var))
(unless (zerop org-babel-perl--lvl) ",\n")))))
(defvar org-babel-perl-buffers '(:default . nil))
(defun org-babel-perl-initiate-session (&optional session params)
"Return nil because sessions are not supported by perl."
nil)
(defvar org-babel-perl-wrapper-method "{
my $babel_sub = sub {
%s
};
open my $BOH, qq(>%s) or die qq(Perl: Could not open output file.$/);
my $rv = &$babel_sub();
my $rt = ref $rv;
select $BOH;
if (qq(ARRAY) eq $rt) {
local $\\=$/;
local $,=qq(\t);
foreach my $rv ( @$rv ) {
my $rt = ref $rv;
if (qq(ARRAY) eq $rt) {
print @$rv;
} else {
print $rv;
}
}
} else {
print $rv;
}
}")
(defvar org-babel-perl-preface nil)
(defvar org-babel-perl-pp-wrapper-method
nil)
(defun org-babel-perl-evaluate (session ibody &optional result-type result-params)
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"Pass BODY to the Perl process in SESSION.
If RESULT-TYPE equals 'output then return a list of the outputs
of the statements in BODY, if RESULT-TYPE equals 'value then
return the value of the last statement in BODY, as elisp."
(when session (error "Sessions are not supported for Perl"))
(let* ((body (concat org-babel-perl-preface ibody))
(tmp-file (org-babel-temp-file "perl-"))
(tmp-babel-file (org-babel-process-file-name
tmp-file 'noquote)))
Backport changes from Emacs revs 115081 and 115082 2013-11-12 Stefan Monnier <monnier@iro.umontreal.ca> Address some byte-compiler warnings. * ob-abc.el (org-babel-expand-body:abc): Use dolist. (org-babel-execute:abc): Fix regexp quoting. * ob-calc.el (org--var-syms): Rename from `var-syms'. * ob-lilypond.el (ly-compile-lilyfile): Remove redundant let-binding. * ob-table.el (sbe): Move debug declaration. * org-clock.el (org--msg-extra): Rename from `msg-extra'. * org.el (org-version): Avoid var name starting with _. (org-inhibit-startup, org-called-with-limited-levels) (org-link-search-inhibit-query, org-time-was-given) (org-end-time-was-given, org-def, org-defdecode, org-with-time): * org-colview.el (org-agenda-overriding-columns-format): * org-agenda.el (org-agenda-multi, org-depend-tag-blocked) (org-agenda-show-log-scoped): * ob-python.el (py-which-bufname, python-shell-buffer-name): * ob-haskell.el (org-export-copy-to-kill-ring): * ob-exp.el (org-link-search-inhibit-query): * ob-R.el (ess-eval-visibly-p): * ob-core.el (org-src-window-setup): Declare before use. (org-babel-expand-noweb-references): Remove unused `blocks-in-buffer'. * ox-odt.el (org-odt-hfy-face-to-css): * org-src.el (org-src-associate-babel-session, org-src-get-lang-mode): * org-bibtex.el (org-bibtex-get, org-bibtex-ask, org-bibtex) (org-bibtex-check): * ob-tangle.el (org-babel-tangle, org-babel-spec-to-string) (org-babel-tangle-single-block, org-babel-tangle-comment-links): * ob-table.el (sbe): * ob-sqlite.el (org-babel-sqlite-expand-vars): * ob-sql.el (org-babel-sql-expand-vars): * ob-shen.el (org-babel-execute:shen): * ob-sh.el (org-babel-execute:sh, org-babel-sh-evaluate): * ob-scala.el (org-babel-scala-evaluate): * ob-ruby.el (org-babel-ruby-table-or-string) (org-babel-ruby-evaluate): * ob-python.el (org-babel-python-table-or-string) (org-babel-python-evaluate-external-process) (org-babel-python-evaluate-session): * ob-picolisp.el (org-babel-execute:picolisp): * ob-perl.el (org-babel-perl-evaluate): * ob-maxima.el (org-babel-execute:maxima): * ob-lisp.el (org-babel-execute:lisp): * ob-java.el (org-babel-execute:java): * ob-io.el (org-babel-io-evaluate): * ob-haskell.el (org-babel-execute:haskell): * ob-fortran.el (org-babel-execute:fortran): * ob-exp.el (org-babel-exp-code): * ob-emacs-lisp.el (org-babel-execute:emacs-lisp): * ob-ditaa.el (org-babel-execute:ditaa): * ob-core.el (org-babel-execute-src-block, org-babel-sha1-hash) (org-babel-parse-header-arguments, org-babel-reassemble-table) (org-babel-goto-src-block-head, org-babel-mark-block) (org-babel-expand-noweb-references, org-babel-script-escape) (org-babel-process-file-name): * ob-clojure.el (org-babel-execute:clojure): * ob-calc.el (org-babel-execute:calc): * ob-awk.el (org-babel-execute:awk): * ob-abc.el (org-babel-execute:abc): * ob-R.el (org-babel-expand-body:R): * ob-C.el (org-babel-C-execute): Avoid deprecated ((lambda) ...). 2013-11-12 Glenn Morris <rgm@gnu.org> * ox-html.el (org-html-scripts): Add 2013 to copyright years. (org-html-infojs-template): Copyright holder to FSF.
2013-11-12 19:57:31 +00:00
(let ((results
(case result-type
(output
(with-temp-file tmp-file
(insert
(org-babel-eval org-babel-perl-command body))
(buffer-string)))
(value
(org-babel-eval org-babel-perl-command
(format org-babel-perl-wrapper-method
body tmp-babel-file))))))
(when results
(org-babel-result-cond result-params
(org-babel-eval-read-file tmp-file)
(org-babel-import-elisp-from-file tmp-file '(16)))))))
(provide 'ob-perl)
;;; ob-perl.el ends here