mirror of
https://git.savannah.gnu.org/git/emacs/org-mode.git
synced 2024-11-23 07:18:53 +00:00
f8e87473d7
* ob-sql.el (org-babel-execute:sql): Add header row delimiter for both mysql and postgresql. Thanks to Daniel for reporting this.
214 lines
7.2 KiB
EmacsLisp
214 lines
7.2 KiB
EmacsLisp
;;; ob-sql.el --- org-babel functions for sql evaluation
|
|
|
|
;; Copyright (C) 2009-2013 Free Software Foundation, Inc.
|
|
|
|
;; Author: Eric Schulte
|
|
;; Keywords: literate programming, reproducible research
|
|
;; Homepage: http://orgmode.org
|
|
|
|
;; This file is part of GNU Emacs.
|
|
|
|
;; GNU Emacs is free software: you can redistribute it and/or modify
|
|
;; it under the terms of the GNU General Public License as published by
|
|
;; the Free Software Foundation, either version 3 of the License, or
|
|
;; (at your option) any later version.
|
|
|
|
;; GNU Emacs is distributed in the hope that it will be useful,
|
|
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
;; GNU General Public License for more details.
|
|
|
|
;; You should have received a copy of the GNU General Public License
|
|
;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
|
|
|
|
;;; Commentary:
|
|
|
|
;; Org-Babel support for evaluating sql source code.
|
|
;; (see also ob-sqlite.el)
|
|
;;
|
|
;; SQL is somewhat unique in that there are many different engines for
|
|
;; the evaluation of sql (Mysql, PostgreSQL, etc...), so much of this
|
|
;; file will have to be implemented engine by engine.
|
|
;;
|
|
;; Also SQL evaluation generally takes place inside of a database.
|
|
;;
|
|
;; Header args used:
|
|
;; - engine
|
|
;; - cmdline
|
|
;; - dbhost
|
|
;; - dbuser
|
|
;; - dbpassword
|
|
;; - database
|
|
;; - colnames (default, nil, means "yes")
|
|
;; - result-params
|
|
;; - out-file
|
|
;; The following are used but not really implemented for SQL:
|
|
;; - colname-names
|
|
;; - rownames
|
|
;; - rowname-names
|
|
;;
|
|
;; TODO:
|
|
;;
|
|
;; - support for sessions
|
|
;; - support for more engines (currently only supports mysql)
|
|
;; - what's a reasonable way to drop table data into SQL?
|
|
;;
|
|
|
|
;;; Code:
|
|
(require 'ob)
|
|
(eval-when-compile (require 'cl))
|
|
|
|
(declare-function org-table-import "org-table" (file arg))
|
|
(declare-function orgtbl-to-csv "org-table" (table params))
|
|
(declare-function org-table-to-lisp "org-table" (&optional txt))
|
|
|
|
(defvar org-babel-default-header-args:sql '())
|
|
|
|
(defconst org-babel-header-args:sql
|
|
'((engine . :any)
|
|
(out-file . :any)
|
|
(dbhost . :any)
|
|
(dbuser . :any)
|
|
(dbpassword . :any)
|
|
(database . :any))
|
|
"SQL-specific header arguments.")
|
|
|
|
(defun org-babel-expand-body:sql (body params)
|
|
"Expand BODY according to the values of PARAMS."
|
|
(org-babel-sql-expand-vars
|
|
body (mapcar #'cdr (org-babel-get-header params :var))))
|
|
|
|
(defun dbstring-mysql (host user password database)
|
|
"Make MySQL cmd line args for database connection. Pass nil to omit that arg."
|
|
(combine-and-quote-strings
|
|
(remq nil
|
|
(list (when host (concat "-h" host))
|
|
(when user (concat "-u" user))
|
|
(when password (concat "-p" password))
|
|
(when database (concat "-D" database))))))
|
|
|
|
(defun org-babel-execute:sql (body params)
|
|
"Execute a block of Sql code with Babel.
|
|
This function is called by `org-babel-execute-src-block'."
|
|
(let* ((result-params (cdr (assoc :result-params params)))
|
|
(cmdline (cdr (assoc :cmdline params)))
|
|
(dbhost (cdr (assoc :dbhost params)))
|
|
(dbuser (cdr (assoc :dbuser params)))
|
|
(dbpassword (cdr (assoc :dbpassword params)))
|
|
(database (cdr (assoc :database params)))
|
|
(engine (cdr (assoc :engine params)))
|
|
(colnames-p (not (equal "no" (cdr (assoc :colnames params)))))
|
|
(in-file (org-babel-temp-file "sql-in-"))
|
|
(out-file (or (cdr (assoc :out-file params))
|
|
(org-babel-temp-file "sql-out-")))
|
|
(header-delim "")
|
|
(command (case (intern engine)
|
|
('dbi (format "dbish --batch '%s' < %s | sed '%s' > %s"
|
|
(or cmdline "")
|
|
(org-babel-process-file-name in-file)
|
|
"/^+/d;s/^\|//;$d"
|
|
(org-babel-process-file-name out-file)))
|
|
('monetdb (format "mclient -f tab %s < %s > %s"
|
|
(or cmdline "")
|
|
(org-babel-process-file-name in-file)
|
|
(org-babel-process-file-name out-file)))
|
|
('msosql (format "osql %s -s \"\t\" -i %s -o %s"
|
|
(or cmdline "")
|
|
(org-babel-process-file-name in-file)
|
|
(org-babel-process-file-name out-file)))
|
|
('mysql (format "mysql %s %s %s < %s > %s"
|
|
(dbstring-mysql dbhost dbuser dbpassword database)
|
|
(if colnames-p "" "-N")
|
|
(or cmdline "")
|
|
(org-babel-process-file-name in-file)
|
|
(org-babel-process-file-name out-file)))
|
|
('postgresql (format
|
|
"psql -A -P footer=off -F \"\t\" -f %s -o %s %s"
|
|
(org-babel-process-file-name in-file)
|
|
(org-babel-process-file-name out-file)
|
|
(or cmdline "")))
|
|
(t (error "No support for the %s SQL engine" engine)))))
|
|
(with-temp-file in-file
|
|
(insert
|
|
(case (intern engine)
|
|
('dbi "/format partbox\n")
|
|
(t ""))
|
|
(org-babel-expand-body:sql body params)))
|
|
(message command)
|
|
(org-babel-eval command "")
|
|
(org-babel-result-cond result-params
|
|
(with-temp-buffer
|
|
(progn (insert-file-contents-literally out-file) (buffer-string)))
|
|
(with-temp-buffer
|
|
(cond
|
|
((or (eq (intern engine) 'mysql)
|
|
(eq (intern engine) 'postgresql))
|
|
;; Add header row delimiter after column-names header in first line
|
|
(cond
|
|
(colnames-p
|
|
(with-temp-buffer
|
|
(insert-file-contents out-file)
|
|
(goto-char (point-min))
|
|
(forward-line 1)
|
|
(insert "-\n")
|
|
(setq header-delim "-")
|
|
(write-file out-file)))))
|
|
(t
|
|
;; Need to figure out the delimiter for the header row
|
|
(with-temp-buffer
|
|
(insert-file-contents out-file)
|
|
(goto-char (point-min))
|
|
(when (re-search-forward "^\\(-+\\)[^-]" nil t)
|
|
(setq header-delim (match-string-no-properties 1)))
|
|
(goto-char (point-max))
|
|
(forward-char -1)
|
|
(while (looking-at "\n")
|
|
(delete-char 1)
|
|
(goto-char (point-max))
|
|
(forward-char -1))
|
|
(write-file out-file))))
|
|
(org-table-import out-file '(16))
|
|
(org-babel-reassemble-table
|
|
(mapcar (lambda (x)
|
|
(if (string= (car x) header-delim)
|
|
'hline
|
|
x))
|
|
(org-table-to-lisp))
|
|
(org-babel-pick-name (cdr (assoc :colname-names params))
|
|
(cdr (assoc :colnames params)))
|
|
(org-babel-pick-name (cdr (assoc :rowname-names params))
|
|
(cdr (assoc :rownames params))))))))
|
|
|
|
(defun org-babel-sql-expand-vars (body vars)
|
|
"Expand the variables held in VARS in BODY."
|
|
(mapc
|
|
(lambda (pair)
|
|
(setq body
|
|
(replace-regexp-in-string
|
|
(format "\$%s" (car pair))
|
|
((lambda (val)
|
|
(if (listp val)
|
|
((lambda (data-file)
|
|
(with-temp-file data-file
|
|
(insert (orgtbl-to-csv
|
|
val '(:fmt (lambda (el) (if (stringp el)
|
|
el
|
|
(format "%S" el)))))))
|
|
data-file)
|
|
(org-babel-temp-file "sql-data-"))
|
|
(if (stringp val) val (format "%S" val))))
|
|
(cdr pair))
|
|
body)))
|
|
vars)
|
|
body)
|
|
|
|
(defun org-babel-prep-session:sql (session params)
|
|
"Raise an error because Sql sessions aren't implemented."
|
|
(error "SQL sessions not yet implemented"))
|
|
|
|
(provide 'ob-sql)
|
|
|
|
|
|
|
|
;;; ob-sql.el ends here
|