diff --git a/pkgs/development/r-modules/bioc-annotation-packages.json b/pkgs/development/r-modules/bioc-annotation-packages.json index 33924055d395..1f127a974408 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.json +++ b/pkgs/development/r-modules/bioc-annotation-packages.json @@ -763,7 +763,7 @@ "name": "ENCODExplorerData", "version": "0.99.5", "sha256": "00gfm5l8pxrfs4cw4jlw6n0cz5s31isg69k833n89800v26w3kvh", - "depends": ["data_table", "jsonlite", "RCurl"] + "depends": ["RCurl", "data_table", "jsonlite"] }, "EPICv2manifest": { "name": "EPICv2manifest", @@ -847,13 +847,13 @@ "name": "FDb.InfiniumMethylation.hg18", "version": "2.2.0", "sha256": "0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a", - "depends": ["AnnotationDbi", "Biostrings", "GenomicFeatures", "org_Hs_eg_db", "TxDb_Hsapiens_UCSC_hg18_knownGene"] + "depends": ["AnnotationDbi", "Biostrings", "GenomicFeatures", "TxDb_Hsapiens_UCSC_hg18_knownGene", "org_Hs_eg_db"] }, "FDb_InfiniumMethylation_hg19": { "name": "FDb.InfiniumMethylation.hg19", "version": "2.2.0", "sha256": "0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0", - "depends": ["AnnotationDbi", "Biostrings", "GenomicFeatures", "org_Hs_eg_db", "TxDb_Hsapiens_UCSC_hg19_knownGene"] + "depends": ["AnnotationDbi", "Biostrings", "GenomicFeatures", "TxDb_Hsapiens_UCSC_hg19_knownGene", "org_Hs_eg_db"] }, "FDb_UCSC_snp135common_hg19": { "name": "FDb.UCSC.snp135common.hg19", @@ -901,7 +901,7 @@ "name": "GenomicState", "version": "0.99.15", "sha256": "1r7z3n6wyrd2cclj5b7sg15wpmjdh9k5b1hjlw7jjx8j384l7l1h", - "depends": ["AnnotationDbi", "AnnotationHub", "bumphunter", "derfinder", "GenomeInfoDb", "GenomicFeatures", "IRanges", "org_Hs_eg_db", "rtracklayer"] + "depends": ["AnnotationDbi", "AnnotationHub", "GenomeInfoDb", "GenomicFeatures", "IRanges", "bumphunter", "derfinder", "org_Hs_eg_db", "rtracklayer"] }, "HDO_db": { "name": "HDO.db", @@ -919,7 +919,7 @@ "name": "Homo.sapiens", "version": "1.3.1", "sha256": "151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01", - "depends": ["AnnotationDbi", "GenomicFeatures", "GO_db", "org_Hs_eg_db", "OrganismDbi", "TxDb_Hsapiens_UCSC_hg19_knownGene"] + "depends": ["AnnotationDbi", "GO_db", "GenomicFeatures", "OrganismDbi", "TxDb_Hsapiens_UCSC_hg19_knownGene", "org_Hs_eg_db"] }, "Hs6UG171_db": { "name": "Hs6UG171.db", @@ -1177,13 +1177,13 @@ "name": "MafH5.gnomAD.v3.1.2.GRCh38", "version": "3.15.1", "sha256": "1q9hlva814sjfz8vm9bzw7xzppbcfy5qq7nnz9w742yr59cjb6mp", - "depends": ["BSgenome", "GenomeInfoDb", "GenomicRanges", "GenomicScores", "HDF5Array", "IRanges", "rhdf5", "S4Vectors"] + "depends": ["BSgenome", "GenomeInfoDb", "GenomicRanges", "GenomicScores", "HDF5Array", "IRanges", "S4Vectors", "rhdf5"] }, "MafH5_gnomAD_v4_0_GRCh38": { "name": "MafH5.gnomAD.v4.0.GRCh38", "version": "3.19.0", "sha256": "1hb905rvxvzh2nap52agcm488yarn2j99d23yxa133jw9d8a9zqk", - "depends": ["BSgenome", "GenomeInfoDb", "GenomicRanges", "GenomicScores", "HDF5Array", "IRanges", "rhdf5", "S4Vectors"] + "depends": ["BSgenome", "GenomeInfoDb", "GenomicRanges", "GenomicScores", "HDF5Array", "IRanges", "S4Vectors", "rhdf5"] }, "MmAgilentDesign026655_db": { "name": "MmAgilentDesign026655.db", @@ -1213,7 +1213,7 @@ "name": "Mus.musculus", "version": "1.3.1", "sha256": "143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y", - "depends": ["AnnotationDbi", "GenomicFeatures", "GO_db", "org_Mm_eg_db", "OrganismDbi", "TxDb_Mmusculus_UCSC_mm10_knownGene"] + "depends": ["AnnotationDbi", "GO_db", "GenomicFeatures", "OrganismDbi", "TxDb_Mmusculus_UCSC_mm10_knownGene", "org_Mm_eg_db"] }, "Norway981_db": { "name": "Norway981.db", @@ -1273,7 +1273,7 @@ "name": "Rattus.norvegicus", "version": "1.3.1", "sha256": "0bpd7i5jvl2jvf822mhxankx7cqqr4l70xp4f7hcknxw3lxia2f1", - "depends": ["AnnotationDbi", "GenomicFeatures", "GO_db", "org_Rn_eg_db", "OrganismDbi", "TxDb_Rnorvegicus_UCSC_rn5_refGene"] + "depends": ["AnnotationDbi", "GO_db", "GenomicFeatures", "OrganismDbi", "TxDb_Rnorvegicus_UCSC_rn5_refGene", "org_Rn_eg_db"] }, "RmiR_Hs_miRNA": { "name": "RmiR.Hs.miRNA", @@ -1321,37 +1321,37 @@ "name": "SNPlocs.Hsapiens.dbSNP144.GRCh37", "version": "0.99.20", "sha256": "1z8kx43ki1jvj7ms7pcybakcdimfwr6zpjvspkjmma97bdz093iz", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SNPlocs_Hsapiens_dbSNP144_GRCh38": { "name": "SNPlocs.Hsapiens.dbSNP144.GRCh38", "version": "0.99.20", "sha256": "0yxmsnxncr7w30r0d7bg5i96pclm2vf40p9jdqa02rc67a6sximn", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SNPlocs_Hsapiens_dbSNP149_GRCh38": { "name": "SNPlocs.Hsapiens.dbSNP149.GRCh38", "version": "0.99.20", "sha256": "17bv25p1261hn9d7mxfp6pvivj15pxyvr92gms8a8msfqg9y0xkb", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SNPlocs_Hsapiens_dbSNP150_GRCh38": { "name": "SNPlocs.Hsapiens.dbSNP150.GRCh38", "version": "0.99.20", "sha256": "0jkwwgxxpm9ry8kizq8hs70sky41pks1ag40y5aqq91yjbpqlckj", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SNPlocs_Hsapiens_dbSNP155_GRCh37": { "name": "SNPlocs.Hsapiens.dbSNP155.GRCh37", "version": "0.99.24", "sha256": "0am2r8hn5ybxlvlw7c0i91n5xii0km3iy7d9a0wc9v1ykvk6qmgz", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SNPlocs_Hsapiens_dbSNP155_GRCh38": { "name": "SNPlocs.Hsapiens.dbSNP155.GRCh38", "version": "0.99.24", "sha256": "1yzywcyk1yngjys9pyykilzw0w4nfxdmwz04w3b17chsbxvckl5s", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "SomaScan_db": { "name": "SomaScan.db", @@ -1657,13 +1657,13 @@ "name": "XtraSNPlocs.Hsapiens.dbSNP144.GRCh37", "version": "0.99.12", "sha256": "0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "XtraSNPlocs_Hsapiens_dbSNP144_GRCh38": { "name": "XtraSNPlocs.Hsapiens.dbSNP144.GRCh38", "version": "0.99.12", "sha256": "0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] }, "adme16cod_db": { "name": "adme16cod.db", @@ -2089,7 +2089,7 @@ "name": "geneplast.data", "version": "0.99.9", "sha256": "1i31kx4kckfg965s9l3pilvmg847av3rpa05aql43259ccyng4hi", - "depends": ["ape", "BiocFileCache", "dplyr", "geneplast", "igraph", "purrr", "readr", "tibble", "tidyr", "treeio"] + "depends": ["BiocFileCache", "ape", "dplyr", "geneplast", "igraph", "purrr", "readr", "tibble", "tidyr", "treeio"] }, "geneplast_data_string_v91": { "name": "geneplast.data.string.v91", @@ -2119,7 +2119,7 @@ "name": "grasp2db", "version": "1.1.0", "sha256": "1aq19myhcl9kdmzy8f4c3ilf0s0ng99rl58jja2xlmqsm2hik7ya", - "depends": ["AnnotationHub", "dbplyr", "digest", "dplyr", "GenomeInfoDb", "RSQLite"] + "depends": ["AnnotationHub", "GenomeInfoDb", "RSQLite", "dbplyr", "digest", "dplyr"] }, "gwascatData": { "name": "gwascatData", @@ -3277,13 +3277,13 @@ "name": "miRBaseVersions.db", "version": "1.1.0", "sha256": "09n0309glsj53g6wainl5m0vwnlx71ija5zmlqd0cpbhdis5zihw", - "depends": ["AnnotationDbi", "DBI", "gtools", "RSQLite"] + "depends": ["AnnotationDbi", "DBI", "RSQLite", "gtools"] }, "miRNAtap_db": { "name": "miRNAtap.db", "version": "0.99.10", "sha256": "1j4igmyb9f4fa0a72hkmq3f7xgvyv38wai3mds5sd6mfgfc3brs3", - "depends": ["AnnotationDbi", "DBI", "miRNAtap", "RSQLite"] + "depends": ["AnnotationDbi", "DBI", "RSQLite", "miRNAtap"] }, "mirbase_db": { "name": "mirbase.db", @@ -3799,1015 +3799,1015 @@ "name": "pd.081229.hg18.promoter.medip.hx1", "version": "0.99.4", "sha256": "1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "oligo", "oligoClasses"] }, "pd_2006_07_18_hg18_refseq_promoter": { "name": "pd.2006.07.18.hg18.refseq.promoter", "version": "1.8.1", "sha256": "09593qkh3jqlgxlqrpl3gla3y1kcshnzlq6nf10xhlps0qdlskhx", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "oligo", "oligoClasses"] }, "pd_2006_07_18_mm8_refseq_promoter": { "name": "pd.2006.07.18.mm8.refseq.promoter", "version": "0.99.3", "sha256": "14cm7z1y7rsk5m2zazg27wvjabckb9ifwa1g091ckwn1jfaf7aqn", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "oligo", "oligoClasses"] }, "pd_2006_10_31_rn34_refseq_promoter": { "name": "pd.2006.10.31.rn34.refseq.promoter", "version": "0.99.3", "sha256": "0v0fa1hn5bwa15vg31dar2x0xfki0xby6qf5p1a0ivrx3pnvbsrl", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "oligo", "oligoClasses"] }, "pd_ag": { "name": "pd.ag", "version": "3.12.0", "sha256": "0kh7ridgihqpibazpxpf9y8qiznxm4nng39701abamadxb5r6qmq", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_aragene_1_0_st": { "name": "pd.aragene.1.0.st", "version": "3.12.0", "sha256": "0255bgsqz8fflnlnxw77wvv6rky46n3pcryk9yhw7nfx0cq19v4r", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_aragene_1_1_st": { "name": "pd.aragene.1.1.st", "version": "3.12.0", "sha256": "105qfxg8p9z0bzffm6zg16c5f6nnv5hddlpcxs0kp3daddap8h5s", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_ath1_121501": { "name": "pd.ath1.121501", "version": "3.12.0", "sha256": "0j83s6402xrggnlnqjyphy577by9w1ncvf1az4immzaixdamaaxc", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_barley1": { "name": "pd.barley1", "version": "3.12.0", "sha256": "0mha6w2zh7gi4y7ngkh84jaff50h8l9a0q9dwc8a00m5npkpkv4g", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_bovgene_1_0_st": { "name": "pd.bovgene.1.0.st", "version": "3.12.0", "sha256": "00ys19pdc7zgprfrhmk0pzfb5q96qy0vqxi2a6g28pxwf3367b30", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_bovgene_1_1_st": { "name": "pd.bovgene.1.1.st", "version": "3.12.0", "sha256": "0npjm9rpcwj5j8sh1mdr5j1fz7dbwrqvjh2jx69fpslry69i6daq", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_bovine": { "name": "pd.bovine", "version": "3.12.0", "sha256": "1g03za5jc8lz21wpx1h2rcxdwsx7ddmmnyflz46z35ginzy41g7h", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_bsubtilis": { "name": "pd.bsubtilis", "version": "3.12.0", "sha256": "07x4dss0zp3p315q38bi7xarycav2hr44x7jb1jx4dypr0jh98mh", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_cangene_1_0_st": { "name": "pd.cangene.1.0.st", "version": "3.12.0", "sha256": "0dcwy6gnlj51hkc2gsv6fdq02vczci4z37f3iy1n8zkvz5b4yw6c", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_cangene_1_1_st": { "name": "pd.cangene.1.1.st", "version": "3.12.0", "sha256": "0pgw1424rvg3k9m3z6ffiyfj91i930dx2slqd15bnvc9hrr75094", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_canine": { "name": "pd.canine", "version": "3.12.0", "sha256": "0xpisxv7c990w44gd5g2iwfzqi3618xa3mdps69z2j4bfrcm37vq", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_canine_2": { "name": "pd.canine.2", "version": "3.12.0", "sha256": "1dx914yyq6ry88d6fipsxsvp41pgcgllznpwsqqm2xa99y85ka5y", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_celegans": { "name": "pd.celegans", "version": "3.12.0", "sha256": "08byc5xvnbfdlikv9118k52pk37br4k8hn86xypkrmbz67fzlzpd", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_charm_hg18_example": { "name": "pd.charm.hg18.example", "version": "0.99.4", "sha256": "0nqv3h4zp83vp7q49n956920x5hdfcbw4z3hlvmqx8dixbgr1jrg", - 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"depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_soygene_1_0_st": { "name": "pd.soygene.1.0.st", "version": "3.12.0", "sha256": "1hg90pma4ikdgxpw1f5mkjcw7na4mmjbhpr06dcssjl3bvmd4yxc", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_soygene_1_1_st": { "name": "pd.soygene.1.1.st", "version": "3.12.0", "sha256": "0978vbl59afgrzy0cmwq4mhsdz5rn5d929nz90fvczm6q8g24616", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_sugar_cane": { "name": "pd.sugar.cane", "version": "3.12.0", "sha256": "09m8m99l9mrhs4gr1rb02l54k8i2wgdzz88qlbpl4xmrfnfn99h6", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_tomato": { "name": "pd.tomato", "version": "3.12.0", "sha256": "12jn8i691j3kkgwa771f4kffzfcxv19vi0waw13akch7x7cc09q7", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_u133_x3p": { "name": "pd.u133.x3p", "version": "3.12.0", "sha256": "171rv9syn90k70ivaj8c48s827c08nycpyyc2b76jy405kaqb1gl", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_vitis_vinifera": { "name": "pd.vitis.vinifera", "version": "3.12.0", "sha256": "19r2k7wx3kygw6syqph24glw0b273gpi0z0y8n4bnd3a184g6hxz", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_wheat": { "name": "pd.wheat", "version": "3.12.0", "sha256": "12n8k5ah8fncbrb2hrpi2ah29fj5rxnh5j5zk8lfwhijg2zf52ra", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_x_laevis_2": { "name": "pd.x.laevis.2", "version": "3.12.0", "sha256": "0zf3rc8rz05hzga2g5b8khszz6sr29dlp8z1jyn94ial284d0fn3", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_x_tropicalis": { "name": "pd.x.tropicalis", "version": "3.12.0", "sha256": "1pb6jm14k0g4z9vffi3clyh7rwc11c89hinb2amczg4xfm5lqrdr", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_xenopus_laevis": { "name": "pd.xenopus.laevis", "version": "3.12.0", "sha256": "1fxd95ak5s2dw16prxdwk20hisss32nywy9dc7y72bpqrv0v309y", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_yeast_2": { "name": "pd.yeast.2", "version": "3.12.0", "sha256": "0l6sxg79xmlb7gdxx4bx24l35jgx5y2qfp3pxzcmdnd7c7qy6z5j", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_yg_s98": { "name": "pd.yg.s98", "version": "3.12.0", "sha256": "1krx7kkjlyc41739c349z0sdbslp19iqfai0xzy6f4jk15524vhj", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_zebgene_1_0_st": { "name": "pd.zebgene.1.0.st", "version": "3.12.0", "sha256": "1vywph8shn23k0s8jmvx34rj34y1zxgwcssjnzbipm71f2sa15hw", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_zebgene_1_1_st": { "name": "pd.zebgene.1.1.st", "version": "3.12.0", "sha256": "0xs3kx7l78dfqkasgz8n5s8qjia5qhdcnj1l8al0ivy8mwvlpyxs", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pd_zebrafish": { "name": "pd.zebrafish", "version": "3.12.0", "sha256": "0gg7y7w51pv0vf39qzyaf09wl3vxy222nr69zgxg7cylwxmaky7v", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pedbarrayv10_db": { "name": "pedbarrayv10.db", @@ -5311,7 +5311,7 @@ "name": "synaptome.db", "version": "0.99.16", "sha256": "0sd3kwhf9gh74j6qiaf1i2qzgn69i9yyvza26aysiplirbsy1jr0", - "depends": ["AnnotationHub", "DBI", "dbplyr", "dplyr", "igraph", "Rdpack", "RSQLite", "synaptome_data"] + "depends": ["AnnotationHub", "DBI", "RSQLite", "Rdpack", "dbplyr", "dplyr", "igraph", "synaptome_data"] }, "targetscan_Hs_eg_db": { "name": "targetscan.Hs.eg.db", diff --git a/pkgs/development/r-modules/bioc-experiment-packages.json b/pkgs/development/r-modules/bioc-experiment-packages.json index 540a84d8b8e4..9e371d34469a 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.json +++ b/pkgs/development/r-modules/bioc-experiment-packages.json @@ -85,7 +85,7 @@ "name": "BeadArrayUseCases", "version": "1.42.0", "sha256": "1s62vqvl3zxf97syp5lymacah594m8szk23skl4bk88jkzkkx6a5", - "depends": ["beadarray", "GEOquery", "limma"] + "depends": ["GEOquery", "beadarray", "limma"] }, "BeadSorted_Saliva_EPIC": { "name": "BeadSorted.Saliva.EPIC", @@ -97,19 +97,19 @@ "name": "BioImageDbs", "version": "1.12.0", "sha256": "1cs6c80h34xbzpsgrpy5aj1f0nlxmy713jj1q5g156z5kiz3mzwc", - "depends": ["animation", "AnnotationHub", "EBImage", "einsum", "ExperimentHub", "filesstrings", "magick", "magrittr", "markdown", "rmarkdown"] + "depends": ["AnnotationHub", "EBImage", "ExperimentHub", "animation", "einsum", "filesstrings", "magick", "magrittr", "markdown", "rmarkdown"] }, "BioPlex": { "name": "BioPlex", "version": "1.10.0", "sha256": "1bkakf7yi1lhwc48pmwifk7qdnc9hzaqnlcni7sy0ypwgb1mfsh7", - "depends": ["BiocFileCache", "GenomeInfoDb", "GenomicRanges", "GEOquery", "graph", "SummarizedExperiment"] + "depends": ["BiocFileCache", "GEOquery", "GenomeInfoDb", "GenomicRanges", "SummarizedExperiment", "graph"] }, "BloodCancerMultiOmics2017": { "name": "BloodCancerMultiOmics2017", "version": "1.24.0", "sha256": "16c6nirflpj0zf2wrj0hb5xcq2168si95np3sm76r3kvwlr48zm7", - "depends": ["beeswarm", "Biobase", "DESeq2", "devtools", "dplyr", "ggdendro", "ggplot2", "glmnet", "gtable", "ipflasso", "RColorBrewer", "reshape2", "scales", "SummarizedExperiment", "survival", "tibble"] + "depends": ["Biobase", "DESeq2", "RColorBrewer", "SummarizedExperiment", "beeswarm", "devtools", "dplyr", "ggdendro", "ggplot2", "glmnet", "gtable", "ipflasso", "reshape2", "scales", "survival", "tibble"] }, "CCl4": { "name": "CCl4", @@ -121,7 +121,7 @@ "name": "CLL", "version": "1.44.0", "sha256": "18bjaqf6cjvjfcp80b5zmb48qbywacqs6aiarsh6ksq2yj4np4zs", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "CLLmethylation": { "name": "CLLmethylation", @@ -259,19 +259,19 @@ "name": "DNAZooData", "version": "1.4.0", "sha256": "1bs2pnak2v2szp7zly8ysf8pqh7f70w70cbqqzvnxlf35npv7cxd", - "depends": ["BiocFileCache", "HiCExperiment", "rjson", "S4Vectors"] + "depends": ["BiocFileCache", "HiCExperiment", "S4Vectors", "rjson"] }, "DeSousa2013": { "name": "DeSousa2013", "version": "1.40.0", "sha256": "1icjl4rr8jk16hs8ri925v3gf9lasi4x39yf5a7av39byb2zwqif", - "depends": ["affy", "AnnotationDbi", "Biobase", "cluster", "ConsensusClusterPlus", "frma", "frmaTools", "gplots", "hgu133plus2_db", "hgu133plus2frmavecs", "pamr", "rgl", "ROCR", "siggenes", "survival", "sva"] + "depends": ["AnnotationDbi", "Biobase", "ConsensusClusterPlus", "ROCR", "affy", "cluster", "frma", "frmaTools", "gplots", "hgu133plus2_db", "hgu133plus2frmavecs", "pamr", "rgl", "siggenes", "survival", "sva"] }, "DmelSGI": { "name": "DmelSGI", "version": "1.36.0", "sha256": "0xjj2ky0k8vazw97qsaf79c6cc3whxg0n5v6lrj6slk4hyfcmbw4", - "depends": ["abind", "gplots", "igraph", "knitr", "limma", "rhdf5", "TSP"] + "depends": ["TSP", "abind", "gplots", "igraph", "knitr", "limma", "rhdf5"] }, "DonaPLLP2013": { "name": "DonaPLLP2013", @@ -295,7 +295,7 @@ "name": "DuoClustering2018", "version": "1.22.0", "sha256": "042v3dpirp68qsdbhygvx3apx94xxdmzpm0swii30kzkw1r1xfck", - "depends": ["dplyr", "ExperimentHub", "ggplot2", "ggthemes", "magrittr", "mclust", "purrr", "reshape2", "tidyr", "viridis"] + "depends": ["ExperimentHub", "dplyr", "ggplot2", "ggthemes", "magrittr", "mclust", "purrr", "reshape2", "tidyr", "viridis"] }, "DvDdata": { "name": "DvDdata", @@ -319,7 +319,7 @@ "name": "EatonEtAlChIPseq", "version": "0.42.0", "sha256": "109law5cc64xipwqyanw71h8v5nx08s1iaskh05hm1w18dsjxff1", - "depends": ["GenomicRanges", "rtracklayer", "ShortRead"] + "depends": ["GenomicRanges", "ShortRead", "rtracklayer"] }, "EpiMix_data": { "name": "EpiMix.data", @@ -349,13 +349,13 @@ "name": "Fletcher2013a", "version": "1.40.0", "sha256": "0l839hd76xr94qjcnscr9c40nvsx99ir6vsy1zx6dn7cha52mpar", - "depends": ["Biobase", "gplots", "limma", "VennDiagram"] + "depends": ["Biobase", "VennDiagram", "gplots", "limma"] }, "Fletcher2013b": { "name": "Fletcher2013b", "version": "1.40.0", "sha256": "0agnkc207bma3h89xxrzcywny664f42vfd63qnmyda4kvdvvk0km", - "depends": ["Fletcher2013a", "igraph", "RColorBrewer", "RedeR", "RTN"] + "depends": ["Fletcher2013a", "RColorBrewer", "RTN", "RedeR", "igraph"] }, "FlowSorted_Blood_450k": { "name": "FlowSorted.Blood.450k", @@ -367,7 +367,7 @@ "name": "FlowSorted.Blood.EPIC", "version": "2.8.0", "sha256": "1b0azyslk2g08i6v1vv2niw32f0zqasw85b9klw83zdy2f5dcdvh", - "depends": ["AnnotationHub", "ExperimentHub", "genefilter", "minfi", "nlme", "quadprog", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "genefilter", "minfi", "nlme", "quadprog"] }, "FlowSorted_CordBlood_450k": { "name": "FlowSorted.CordBlood.450k", @@ -379,7 +379,7 @@ "name": "FlowSorted.CordBloodCombined.450k", "version": "1.20.0", "sha256": "14486v4cs3j1jmifsgy3ihpm5x7i9581yz4bwsl3h2a7p86cdsbv", - "depends": ["AnnotationHub", "ExperimentHub", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "minfi", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "SummarizedExperiment", "minfi"] }, "FlowSorted_CordBloodNorway_450k": { "name": "FlowSorted.CordBloodNorway.450k", @@ -415,7 +415,7 @@ "name": "GSE13015", "version": "1.12.0", "sha256": "0l1v30g1g93wk5bnhkw52pwypby6n0rxpp11aw93j733whn9j2y4", - "depends": ["Biobase", "GEOquery", "preprocessCore", "SummarizedExperiment"] + "depends": ["Biobase", "GEOquery", "SummarizedExperiment", "preprocessCore"] }, "GSE159526": { "name": "GSE159526", @@ -445,7 +445,7 @@ "name": "GenomicDistributionsData", "version": "1.12.0", "sha256": "16cj8w6n053aciz9wclppmc22b9s4a9lh58r6wi2lhs0sp7iirzn", - "depends": ["AnnotationFilter", "AnnotationHub", "BSgenome", "data_table", "ensembldb", "ExperimentHub", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges"] + "depends": ["AnnotationFilter", "AnnotationHub", "BSgenome", "ExperimentHub", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "data_table", "ensembldb"] }, "GeuvadisTranscriptExpr": { "name": "GeuvadisTranscriptExpr", @@ -463,19 +463,19 @@ "name": "HCATonsilData", "version": "1.2.0", "sha256": "1wg0mvc3gwf80bgsfkvdcnnzy7qbnffbbrcy3f87jyw4a20irpp1", - "depends": ["base64enc", "ExperimentHub", "HDF5Array", "htmltools", "rmarkdown", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "base64enc", "htmltools", "rmarkdown"] }, "HD2013SGI": { "name": "HD2013SGI", "version": "1.44.0", "sha256": "0r4nlbz7b70z1ii9wisk8nj218m2j5qmpfj8k2sp8k723gmsg4x0", - "depends": ["EBImage", "geneplotter", "gplots", "limma", "LSD", "RColorBrewer", "splots", "vcd"] + "depends": ["EBImage", "LSD", "RColorBrewer", "geneplotter", "gplots", "limma", "splots", "vcd"] }, "HDCytoData": { "name": "HDCytoData", "version": "1.24.0", "sha256": "0pmzgp7x1zam3b7agi8mdq14qmx8nln9lnhiglax2pvg2a5n4ii4", - "depends": ["ExperimentHub", "flowCore", "SummarizedExperiment"] + "depends": ["ExperimentHub", "SummarizedExperiment", "flowCore"] }, "HEEBOdata": { "name": "HEEBOdata", @@ -493,13 +493,13 @@ "name": "HMP16SData", "version": "1.24.0", "sha256": "16x7mw5bdsyda1qv0v739pkr8lxq8hga84vhmaa8qnx45pwqyyh0", - "depends": ["AnnotationHub", "assertthat", "dplyr", "ExperimentHub", "kableExtra", "knitr", "magrittr", "readr", "S4Vectors", "stringr", "SummarizedExperiment", "tibble"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "assertthat", "dplyr", "kableExtra", "knitr", "magrittr", "readr", "stringr", "tibble"] }, "HMP2Data": { "name": "HMP2Data", "version": "1.18.0", "sha256": "014bf29kg9dizi3p0fdxrs42bf9a0dc2f7zd7yxzvzs3jqvniji2", - "depends": ["AnnotationHub", "assertthat", "data_table", "dplyr", "ExperimentHub", "kableExtra", "knitr", "magrittr", "MultiAssayExperiment", "phyloseq", "readr", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "assertthat", "data_table", "dplyr", "kableExtra", "knitr", "magrittr", "phyloseq", "readr"] }, "HSMMSingleCell": { "name": "HSMMSingleCell", @@ -529,7 +529,7 @@ "name": "HiBED", "version": "1.2.0", "sha256": "0sqxlm2nn8g7qfwhndf79dg7v57ngmznr0b297v59nhhpigs1g2q", - "depends": ["AnnotationHub", "dplyr", "FlowSorted_Blood_EPIC", "FlowSorted_DLPFC_450k", "minfi", "SummarizedExperiment", "tibble"] + "depends": ["AnnotationHub", "FlowSorted_Blood_EPIC", "FlowSorted_DLPFC_450k", "SummarizedExperiment", "dplyr", "minfi", "tibble"] }, "HiCDataHumanIMR90": { "name": "HiCDataHumanIMR90", @@ -559,7 +559,7 @@ "name": "Hiiragi2013", "version": "1.40.0", "sha256": "0xn3ayh2x04cvwrr476k8vlp8lhk5lxaqg01a0ynkrrc4scf2f99", - "depends": ["affy", "Biobase", "boot", "clue", "cluster", "genefilter", "geneplotter", "gplots", "gtools", "KEGGREST", "lattice", "latticeExtra", "MASS", "mouse4302_db", "RColorBrewer", "xtable"] + "depends": ["Biobase", "KEGGREST", "MASS", "RColorBrewer", "affy", "boot", "clue", "cluster", "genefilter", "geneplotter", "gplots", "gtools", "lattice", "latticeExtra", "mouse4302_db", "xtable"] }, "HumanAffyData": { "name": "HumanAffyData", @@ -571,7 +571,7 @@ "name": "IHWpaper", "version": "1.32.0", "sha256": "0s3x2chbr8ik3rhgzmfhaq8xlsnnkzfhjh4p327sn5aar6xhaj67", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "cowplot", "DESeq2", "dplyr", "fdrtool", "genefilter", "ggplot2", "IHW", "qvalue", "Rcpp", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DESeq2", "IHW", "Rcpp", "SummarizedExperiment", "cowplot", "dplyr", "fdrtool", "genefilter", "ggplot2", "qvalue"] }, "ITALICSData": { "name": "ITALICSData", @@ -613,7 +613,7 @@ "name": "JohnsonKinaseData", "version": "1.0.0", "sha256": "1ry5p2zll8hazxil4sa57v50b7xr9bk4p5a509i4mvasb089al3l", - "depends": ["BiocParallel", "checkmate", "dplyr", "ExperimentHub", "purrr", "stringr", "tidyr"] + "depends": ["BiocParallel", "ExperimentHub", "checkmate", "dplyr", "purrr", "stringr", "tidyr"] }, "KEGGandMetacoreDzPathwaysGEO": { "name": "KEGGandMetacoreDzPathwaysGEO", @@ -679,7 +679,7 @@ "name": "MAQCsubset", "version": "1.42.0", "sha256": "0x59gbv91d90hasa2gwkv00c06zp8fj4fk18386ajfag0wpvpb2n", - "depends": ["affy", "Biobase", "lumi"] + "depends": ["Biobase", "affy", "lumi"] }, "MEDIPSData": { "name": "MEDIPSData", @@ -733,25 +733,25 @@ "name": "MetaGxBreast", "version": "1.24.0", "sha256": "05cz500r6fhlq5pfviiqj8cfv173027dqsdvhvvi57cbbx3qqn6r", - "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "impute", "lattice", "SummarizedExperiment"] + "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "SummarizedExperiment", "impute", "lattice"] }, "MetaGxOvarian": { "name": "MetaGxOvarian", "version": "1.24.0", "sha256": "01cnm2rf6ls1q5plgazxqkrrw3b6mcrxbq0wrmi0ra8daqh6asi7", - "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "impute", "lattice", "SummarizedExperiment"] + "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "SummarizedExperiment", "impute", "lattice"] }, "MetaGxPancreas": { "name": "MetaGxPancreas", "version": "1.24.0", "sha256": "150i72jrq3qshsh0m20kxdcx7zxz1cgvlk0y2nxnacs1xbdnywxv", - "depends": ["AnnotationHub", "ExperimentHub", "impute", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "impute"] }, "MetaScope": { "name": "MetaScope", "version": "1.4.0", "sha256": "1kaisvhp66g95w4dycw8jzsxh00f2c193rjcla6l5k2dn5rnsyr9", - "depends": ["BiocFileCache", "Biostrings", "data_table", "dplyr", "ggplot2", "magrittr", "Matrix", "MultiAssayExperiment", "Rbowtie2", "readr", "rlang", "Rsamtools", "S4Vectors", "stringr", "SummarizedExperiment", "taxize", "tibble", "tidyr"] + "depends": ["BiocFileCache", "Biostrings", "Matrix", "MultiAssayExperiment", "Rbowtie2", "Rsamtools", "S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "ggplot2", "magrittr", "readr", "rlang", "stringr", "taxize", "tibble", "tidyr"] }, "MethylAidData": { "name": "MethylAidData", @@ -763,13 +763,13 @@ "name": "MethylSeqData", "version": "1.14.0", "sha256": "197347pavq9hjcpwa9lq66lyjr1jb7mymd9pjz01rr9f77d7rqq5", - "depends": ["ExperimentHub", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "rhdf5", "S4Vectors", "SummarizedExperiment"] + "depends": ["ExperimentHub", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "S4Vectors", "SummarizedExperiment", "rhdf5"] }, "MicrobiomeBenchmarkData": { "name": "MicrobiomeBenchmarkData", "version": "1.6.0", "sha256": "00lr183x24yx4xd9cpxvzkcxmqp4dinfi1nz2arqqxnbfcp2s25j", - "depends": ["ape", "BiocFileCache", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment"] + "depends": ["BiocFileCache", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "ape"] }, "MouseAgingData": { "name": "MouseAgingData", @@ -811,7 +811,7 @@ "name": "NestLink", "version": "1.20.0", "sha256": "1yh1nivipyrx3h0par8cf943licl1rs47jvfwz1392hi09vji15j", - "depends": ["AnnotationHub", "Biostrings", "ExperimentHub", "gplots", "protViz", "ShortRead"] + "depends": ["AnnotationHub", "Biostrings", "ExperimentHub", "ShortRead", "gplots", "protViz"] }, "NetActivityData": { "name": "NetActivityData", @@ -823,7 +823,7 @@ "name": "Neve2006", "version": "0.42.0", "sha256": "0w3ph610lhxyg1knhsnnxpw32sw2n5p57svpbhqm3zmphx29nw3h", - "depends": ["annotate", "Biobase", "hgu133a_db"] + "depends": ["Biobase", "annotate", "hgu133a_db"] }, "NxtIRFdata": { "name": "NxtIRFdata", @@ -859,7 +859,7 @@ "name": "PREDAsampledata", "version": "0.44.0", "sha256": "0ydb4y2s8kshia7k6mr941f1fc7nsqahm1g86ig3wpcq7al33z1b", - "depends": ["affy", "annotate", "Biobase", "PREDA"] + "depends": ["Biobase", "PREDA", "affy", "annotate"] }, "PWMEnrich_Dmelanogaster_background": { "name": "PWMEnrich.Dmelanogaster.background", @@ -961,7 +961,7 @@ "name": "RNAinteractMAPK", "version": "1.42.0", "sha256": "0vm20x1lfgl671rrwvxybcwjgk7falb3d5xi6hiq9jivvbms9120", - "depends": ["Biobase", "fields", "gdata", "genefilter", "lattice", "MASS", "RNAinteract", "sparseLDA"] + "depends": ["Biobase", "MASS", "RNAinteract", "fields", "gdata", "genefilter", "lattice", "sparseLDA"] }, "RNAmodR_Data": { "name": "RNAmodR.Data", @@ -1051,7 +1051,7 @@ "name": "ReactomeGSA.data", "version": "1.18.0", "sha256": "1410ks6s7albf6sly8ry0ln58ws9jlfn62amniqqsg46kx4xc4bh", - "depends": ["edgeR", "limma", "ReactomeGSA", "Seurat"] + "depends": ["ReactomeGSA", "Seurat", "edgeR", "limma"] }, "RegParallel": { "name": "RegParallel", @@ -1063,7 +1063,7 @@ "name": "RforProteomics", "version": "1.42.0", "sha256": "0irg6wrwy82xhlkgj1vphh6ncp9s6qcpp40mxv1vq969qjjchkk9", - "depends": ["BiocManager", "biocViews", "MSnbase", "R_utils"] + "depends": ["BiocManager", "MSnbase", "R_utils", "biocViews"] }, "RnBeads_hg19": { "name": "RnBeads.hg19", @@ -1201,13 +1201,13 @@ "name": "SpikeInSubset", "version": "1.44.0", "sha256": "118v972wwq4h2ww2nlb7mzva3d38c4hzmbq0v28500q2zc1ykv4l", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "SubcellularSpatialData": { "name": "SubcellularSpatialData", "version": "1.0.0", "sha256": "0lyg6hiv8ch7c8a7zzi02c9fmq2zqif88khhslj15gvg5dznw79v", - "depends": ["dplyr", "hexbin", "Matrix", "SpatialExperiment"] + "depends": ["Matrix", "SpatialExperiment", "dplyr", "hexbin"] }, "TBX20BamSubset": { "name": "TBX20BamSubset", @@ -1291,7 +1291,7 @@ "name": "TabulaMurisSenisData", "version": "1.10.0", "sha256": "1b1aj06qacvzpabz8r0vkqpm0pp48vx26xx84h5ihzg9232wrqmy", - "depends": ["AnnotationHub", "ExperimentHub", "gdata", "HDF5Array", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "SingleCellExperiment", "SummarizedExperiment", "gdata"] }, "TargetScoreData": { "name": "TargetScoreData", @@ -1321,7 +1321,7 @@ "name": "TumourMethData", "version": "1.2.0", "sha256": "1xwm2amlb1vrf3hpdw9387nglc6pbxxdxik56byr5p8856fkjdav", - "depends": ["ExperimentHub", "GenomicRanges", "HDF5Array", "R_utils", "rhdf5", "SummarizedExperiment"] + "depends": ["ExperimentHub", "GenomicRanges", "HDF5Array", "R_utils", "SummarizedExperiment", "rhdf5"] }, "VariantToolsData": { "name": "VariantToolsData", @@ -1357,7 +1357,7 @@ "name": "XhybCasneuf", "version": "1.42.0", "sha256": "0n0k6h9b9gkywy6cmlx15g09287aqzvc228j3jgjkv0ljbwsq756", - "depends": ["affy", "ath1121501cdf", "RColorBrewer", "tinesath1cdf"] + "depends": ["RColorBrewer", "affy", "ath1121501cdf", "tinesath1cdf"] }, "adductData": { "name": "adductData", @@ -1369,7 +1369,7 @@ "name": "affycompData", "version": "1.42.0", "sha256": "16fri51jhp0lm3aj9hw2s6jzxjlxz2qbd36j9zcbcs7sb6jh42jy", - "depends": ["affycomp", "Biobase"] + "depends": ["Biobase", "affycomp"] }, "affydata": { "name": "affydata", @@ -1405,7 +1405,7 @@ "name": "beadarrayExampleData", "version": "1.42.0", "sha256": "0l5n1d7x4gc3w2kc6vq0gqxp1wdpa2sn5k75yf5fc802m11nrkd1", - "depends": ["beadarray", "Biobase"] + "depends": ["Biobase", "beadarray"] }, "benchmarkfdrData2019": { "name": "benchmarkfdrData2019", @@ -1429,7 +1429,7 @@ "name": "biscuiteerData", "version": "1.18.0", "sha256": "1qv2ajy312diacb3mihc3q7hrrlq48k5vd9v0g6w38cqz6gnz0as", - "depends": ["AnnotationHub", "curl", "ExperimentHub", "GenomicRanges"] + "depends": ["AnnotationHub", "ExperimentHub", "GenomicRanges", "curl"] }, "bladderbatch": { "name": "bladderbatch", @@ -1537,7 +1537,7 @@ "name": "celldex", "version": "1.14.0", "sha256": "155hnh62ra06b52xk78f111b10gm34d1djvl5w5mabvrk4vknwj6", - "depends": ["alabaster_base", "alabaster_matrix", "alabaster_se", "AnnotationDbi", "AnnotationHub", "DBI", "DelayedArray", "DelayedMatrixStats", "ExperimentHub", "gypsum", "jsonlite", "Matrix", "RSQLite", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "AnnotationHub", "DBI", "DelayedArray", "DelayedMatrixStats", "ExperimentHub", "Matrix", "RSQLite", "S4Vectors", "SummarizedExperiment", "alabaster_base", "alabaster_matrix", "alabaster_se", "gypsum", "jsonlite"] }, "cfToolsData": { "name": "cfToolsData", @@ -1549,7 +1549,7 @@ "name": "chipenrich.data", "version": "2.28.0", "sha256": "1kpc3ljayxycadshdgyzkbagh4vd7cmyqqccy61269skpasdnwbv", - "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "readr", "rtracklayer", "S4Vectors"] + "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "readr", "rtracklayer"] }, "chipseqDBData": { "name": "chipseqDBData", @@ -1615,7 +1615,7 @@ "name": "curatedBreastData", "version": "2.32.0", "sha256": "0zglh1h9hw6rnpdl4v5v7cmzgcvxa0phfixfwwmi8il0rn40jd68", - "depends": ["Biobase", "BiocStyle", "ggplot2", "impute", "XML"] + "depends": ["Biobase", "BiocStyle", "XML", "ggplot2", "impute"] }, "curatedCRCData": { "name": "curatedCRCData", @@ -1627,7 +1627,7 @@ "name": "curatedMetagenomicData", "version": "3.12.0", "sha256": "1hp1s5v567xidmmpn6jv7i3fid5hwg3i43y9471aabq00nsg67b1", - "depends": ["AnnotationHub", "dplyr", "ExperimentHub", "magrittr", "mia", "purrr", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "TreeSummarizedExperiment"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "dplyr", "magrittr", "mia", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "curatedOvarianData": { "name": "curatedOvarianData", @@ -1639,7 +1639,7 @@ "name": "curatedPCaData", "version": "1.0.0", "sha256": "0wqvg0z19lxyqbbsl7fbq12jgycpqycx45vy24z4sph48kz2ag3w", - "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "RaggedExperiment", "rlang", "S4Vectors"] + "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "RaggedExperiment", "S4Vectors", "rlang"] }, "curatedTBData": { "name": "curatedTBData", @@ -1663,7 +1663,7 @@ "name": "depmap", "version": "1.18.0", "sha256": "0imajc5kiqf45sjwxagvg5bjvmnrzrk3ls4bflwxj9rnd84v2r62", - "depends": ["AnnotationHub", "BiocFileCache", "curl", "dplyr", "ExperimentHub", "httr2", "tibble"] + "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub", "curl", "dplyr", "httr2", "tibble"] }, "derfinderData": { "name": "derfinderData", @@ -1717,7 +1717,7 @@ "name": "emtdata", "version": "1.12.0", "sha256": "0b3hvggndw3bzddk0vflbn0wx8fr08b6nphjhil1wqlyp3535xk4", - "depends": ["edgeR", "ExperimentHub", "SummarizedExperiment"] + "depends": ["ExperimentHub", "SummarizedExperiment", "edgeR"] }, "epimutacionsData": { "name": "epimutacionsData", @@ -1801,7 +1801,7 @@ "name": "furrowSeg", "version": "1.32.0", "sha256": "125wyqi4h7kkrhbcn4gknwlw6panian2hfsapwyqfxz0mg6ssg5z", - "depends": ["abind", "dplyr", "EBImage", "locfit", "tiff"] + "depends": ["EBImage", "abind", "dplyr", "locfit", "tiff"] }, "gDNAinRNAseqData": { "name": "gDNAinRNAseqData", @@ -1915,7 +1915,7 @@ "name": "healthyControlsPresenceChecker", "version": "1.8.0", "sha256": "14gq24z99l04kcn13414zjn17184l3p5l6draxwy3820m9sijzgq", - "depends": ["geneExpressionFromGEO", "GEOquery", "magrittr", "xml2"] + "depends": ["GEOquery", "geneExpressionFromGEO", "magrittr", "xml2"] }, "healthyFlowData": { "name": "healthyFlowData", @@ -1951,7 +1951,7 @@ "name": "homosapienDEE2CellScore", "version": "1.0.0", "sha256": "1vwasylfqv4xgmhkzykdwhlxh0kk4pl4bcndx5dpn7i386zp6chs", - "depends": ["BiocGenerics", "DESeq2", "ExperimentHub", "getDEE2", "MatrixGenerics", "Rtsne", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "DESeq2", "ExperimentHub", "MatrixGenerics", "Rtsne", "S4Vectors", "SummarizedExperiment", "getDEE2"] }, "humanStemCell": { "name": "humanStemCell", @@ -1963,7 +1963,7 @@ "name": "imcdatasets", "version": "1.12.0", "sha256": "135sffkn322g6zp6wz6ri2cg4wj9pwadmv4b6zaaxwximpx5xy04", - "depends": ["cytomapper", "DelayedArray", "ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment"] + "depends": ["DelayedArray", "ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "cytomapper"] }, "kidpack": { "name": "kidpack", @@ -1975,7 +1975,7 @@ "name": "leeBamViews", "version": "1.40.0", "sha256": "15prksw8pi302i8qpw3skwljyj3hfm9wld2lzpcgz7nnpzrqm8bc", - "depends": ["Biobase", "BSgenome", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["BSgenome", "Biobase", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] }, "leukemiasEset": { "name": "leukemiasEset", @@ -2069,9 +2069,9 @@ }, "microbiomeDataSets": { "name": "microbiomeDataSets", - "version": "1.12.0", - "sha256": "0ng0sbdn3y2h7dyn42rq5ci12xx5y3hqb87n7xi7lc1gp1pcxcf2", - "depends": ["ape", "BiocGenerics", "Biostrings", "ExperimentHub", "MultiAssayExperiment", "SummarizedExperiment", "TreeSummarizedExperiment"] + "version": "1.12.1", + "sha256": "1jc5xcf48xwa7m1g55z38mjnbsqj7gqzwdb37kg1q60rk6bj4mj2", + "depends": ["BiocGenerics", "Biostrings", "ExperimentHub", "MultiAssayExperiment", "SummarizedExperiment", "TreeSummarizedExperiment", "ape"] }, "minfiData": { "name": "minfiData", @@ -2161,7 +2161,7 @@ "name": "mvoutData", "version": "1.40.0", "sha256": "01rxr4867w2zcy4gmcg868g2xqal5vb4xw2izfmcwplxah5380wv", - "depends": ["affy", "Biobase", "lumi"] + "depends": ["Biobase", "affy", "lumi"] }, "nanotubes": { "name": "nanotubes", @@ -2197,7 +2197,7 @@ "name": "orthosData", "version": "1.2.0", "sha256": "000jqijl7mpp0qfgg0aqx7jzn5bviybp2ndxmikyn0rmcvi9057k", - "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub", "HDF5Array", "stringr", "SummarizedExperiment"] + "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub", "HDF5Array", "SummarizedExperiment", "stringr"] }, "pRolocdata": { "name": "pRolocdata", @@ -2233,7 +2233,7 @@ "name": "pd.atdschip.tiling", "version": "0.42.0", "sha256": "17sf3x7mhkjk605hmc0idx1d3pbx49hyfaxzifkc6bq1mmq5113x", - "depends": ["Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pepDat": { "name": "pepDat", @@ -2305,7 +2305,7 @@ "name": "qPLEXdata", "version": "1.22.0", "sha256": "1a8mzbll0s9w82y4sy153jna6677sdpp3bfzs83qaqpnjymjzfpc", - "depends": ["dplyr", "knitr", "MSnbase", "qPLEXanalyzer"] + "depends": ["MSnbase", "dplyr", "knitr", "qPLEXanalyzer"] }, "rRDPData": { "name": "rRDPData", @@ -2317,7 +2317,7 @@ "name": "raerdata", "version": "1.2.0", "sha256": "15j7sw3kvgqqb7m4y4kn40p8g8s1f204lfnb5zskkjfakj6c2j03", - "depends": ["BiocGenerics", "ExperimentHub", "Rsamtools", "rtracklayer", "SingleCellExperiment"] + "depends": ["BiocGenerics", "ExperimentHub", "Rsamtools", "SingleCellExperiment", "rtracklayer"] }, "rcellminerData": { "name": "rcellminerData", @@ -2347,19 +2347,19 @@ "name": "scATAC.Explorer", "version": "1.10.0", "sha256": "0s2w9b9bb1bzqnlhlrgvp17bifhryvymzaid02ypkqaql06d6nyx", - "depends": ["BiocFileCache", "data_table", "Matrix", "S4Vectors", "SingleCellExperiment"] + "depends": ["BiocFileCache", "Matrix", "S4Vectors", "SingleCellExperiment", "data_table"] }, "scMultiome": { "name": "scMultiome", - "version": "1.4.0", - "sha256": "1fiivxs35zanssfkjv83fa898fjr93xgq5g2i9m2qkv2pxqlyan8", - "depends": ["AnnotationHub", "AzureStor", "checkmate", "DelayedArray", "ExperimentHub", "GenomicRanges", "HDF5Array", "MultiAssayExperiment", "rhdf5", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "version": "1.4.1", + "sha256": "0rgcg8qhpap7wnlndf9bmild55yxv21zdn89hs5h1503rfchlx2d", + "depends": ["AnnotationHub", "AzureStor", "DelayedArray", "ExperimentHub", "GenomicRanges", "HDF5Array", "MultiAssayExperiment", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "checkmate", "rhdf5"] }, "scRNAseq": { "name": "scRNAseq", "version": "2.18.0", "sha256": "0jsq037ba4xsb3bwwf021jw2hqv30vb5nrjag97xadx75z5fzqlr", - "depends": ["alabaster_base", "alabaster_matrix", "alabaster_sce", "AnnotationDbi", "AnnotationHub", "BiocGenerics", "DBI", "DelayedArray", "ensembldb", "ExperimentHub", "GenomicFeatures", "GenomicRanges", "gypsum", "jsonlite", "Matrix", "RSQLite", "S4Vectors", "SingleCellExperiment", "SparseArray", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "DBI", "DelayedArray", "ExperimentHub", "GenomicFeatures", "GenomicRanges", "Matrix", "RSQLite", "S4Vectors", "SingleCellExperiment", "SparseArray", "SummarizedExperiment", "alabaster_base", "alabaster_matrix", "alabaster_sce", "ensembldb", "gypsum", "jsonlite"] }, "scTHI_data": { "name": "scTHI.data", @@ -2407,7 +2407,7 @@ "name": "sesameData", "version": "1.22.0", "sha256": "05k67isysszzfkkbi811dkab0cmxnwz81p2ldcqz3gsq5qin3p1g", - "depends": ["AnnotationHub", "ExperimentHub", "GenomeInfoDb", "GenomicRanges", "IRanges", "readr", "S4Vectors", "stringr"] + "depends": ["AnnotationHub", "ExperimentHub", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "readr", "stringr"] }, "seventyGeneData": { "name": "seventyGeneData", @@ -2425,7 +2425,7 @@ "name": "signatureSearchData", "version": "1.18.0", "sha256": "11y1dbixj9b91whzq4lrmad5f4f6gqdv70ar4rg20ql1699dx5l5", - "depends": ["affy", "Biobase", "dplyr", "ExperimentHub", "limma", "magrittr", "R_utils", "rhdf5"] + "depends": ["Biobase", "ExperimentHub", "R_utils", "affy", "dplyr", "limma", "magrittr", "rhdf5"] }, "simpIntLists": { "name": "simpIntLists", @@ -2449,7 +2449,7 @@ "name": "spatialLIBD", "version": "1.16.2", "sha256": "0bbwh9mfz7iscv8a1jlc7g1c452hv4qr95hwv3z6h2mqf8pcr5g8", - "depends": ["AnnotationHub", "benchmarkme", "BiocFileCache", "BiocGenerics", "cowplot", "DT", "edgeR", "ExperimentHub", "fields", "GenomicRanges", "ggplot2", "golem", "IRanges", "jsonlite", "limma", "magick", "Matrix", "MatrixGenerics", "paletteer", "plotly", "png", "RColorBrewer", "rlang", "rtracklayer", "S4Vectors", "scater", "scuttle", "sessioninfo", "shiny", "shinyWidgets", "SingleCellExperiment", "SpatialExperiment", "statmod", "SummarizedExperiment", "tibble", "viridisLite"] + "depends": ["AnnotationHub", "BiocFileCache", "BiocGenerics", "DT", "ExperimentHub", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "benchmarkme", "cowplot", "edgeR", "fields", "ggplot2", "golem", "jsonlite", "limma", "magick", "paletteer", "plotly", "png", "rlang", "rtracklayer", "scater", "scuttle", "sessioninfo", "shiny", "shinyWidgets", "statmod", "tibble", "viridisLite"] }, "spqnData": { "name": "spqnData", @@ -2521,7 +2521,7 @@ "name": "tuberculosis", "version": "1.10.0", "sha256": "1l9gm8jlvall905053mmbn0wd053ssnsxy74gza37w669il85awn", - "depends": ["AnnotationHub", "dplyr", "ExperimentHub", "magrittr", "purrr", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "dplyr", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "tweeDEseqCountData": { "name": "tweeDEseqCountData", diff --git a/pkgs/development/r-modules/bioc-packages.json b/pkgs/development/r-modules/bioc-packages.json index 4a2723c2da33..12ddee64deee 100644 --- a/pkgs/development/r-modules/bioc-packages.json +++ b/pkgs/development/r-modules/bioc-packages.json @@ -19,7 +19,7 @@ "name": "ACE", "version": "1.22.0", "sha256": "1gpn9z09cfcy2mj7m32xfb2bjjwl01g9qn9nqaivmqbi4k6icrr8", - "depends": ["Biobase", "GenomicRanges", "ggplot2", "QDNAseq"] + "depends": ["Biobase", "GenomicRanges", "QDNAseq", "ggplot2"] }, "ACME": { "name": "ACME", @@ -31,25 +31,25 @@ "name": "ADAM", "version": "1.20.0", "sha256": "0z0rmpwfhd8p6c4zscviwsningsm740r3pb95cl8brasfdg1kl3v", - "depends": ["dplyr", "DT", "GO_db", "KEGGREST", "knitr", "pbapply", "Rcpp", "stringr", "SummarizedExperiment"] + "depends": ["DT", "GO_db", "KEGGREST", "Rcpp", "SummarizedExperiment", "dplyr", "knitr", "pbapply", "stringr"] }, "ADAMgui": { "name": "ADAMgui", "version": "1.20.0", "sha256": "08kxkb6hgbw7l9dv1wn3jfdkc0sizqdgmjkrzpq73q7rf0p4248g", - "depends": ["ADAM", "colorRamps", "data_table", "dplyr", "DT", "ggplot2", "ggpubr", "ggrepel", "ggsignif", "GO_db", "gridExtra", "knitr", "RColorBrewer", "reshape2", "shiny", "shinyjs", "stringi", "stringr", "testthat", "varhandle"] + "depends": ["ADAM", "DT", "GO_db", "RColorBrewer", "colorRamps", "data_table", "dplyr", "ggplot2", "ggpubr", "ggrepel", "ggsignif", "gridExtra", "knitr", "reshape2", "shiny", "shinyjs", "stringi", "stringr", "testthat", "varhandle"] }, "ADImpute": { "name": "ADImpute", "version": "1.14.0", "sha256": "0kihg0mwm2ysgnx3jg6xln7ibvgmky0x2hjbcmdqlg65znczh4b6", - "depends": ["BiocParallel", "checkmate", "data_table", "DrImpute", "kernlab", "MASS", "Matrix", "rsvd", "S4Vectors", "SAVER", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "DrImpute", "MASS", "Matrix", "S4Vectors", "SAVER", "SingleCellExperiment", "SummarizedExperiment", "checkmate", "data_table", "kernlab", "rsvd"] }, "ADaCGH2": { "name": "ADaCGH2", "version": "2.44.0", "sha256": "1j9dn0xw8mdfvi2ccm1d5j9q740wb89wqi6715n6jy3dljlc8irz", - "depends": ["aCGH", "bit", "cluster", "DNAcopy", "ff", "GLAD", "tilingArray", "waveslim"] + "depends": ["DNAcopy", "GLAD", "aCGH", "bit", "cluster", "ff", "tilingArray", "waveslim"] }, "AGDEX": { "name": "AGDEX", @@ -73,13 +73,13 @@ "name": "ALDEx2", "version": "1.36.0", "sha256": "1bqpk93bbyajw2dm54d68f3dkc0jgcny109asfm6kcz7dg7szi3y", - "depends": ["BiocParallel", "directlabels", "GenomicRanges", "IRanges", "lattice", "latticeExtra", "multtest", "Rfast", "S4Vectors", "SummarizedExperiment", "zCompositions"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "Rfast", "S4Vectors", "SummarizedExperiment", "directlabels", "lattice", "latticeExtra", "multtest", "zCompositions"] }, "AMARETTO": { "name": "AMARETTO", "version": "1.20.0", "sha256": "0n3w00x1qajkg43ip3l63k2qs0d1x2zv8wv4xj0iqwl6r6cqgxnf", - "depends": ["BiocFileCache", "callr", "circlize", "ComplexHeatmap", "curatedTCGAData", "doParallel", "dplyr", "DT", "foreach", "ggplot2", "glmnet", "gridExtra", "httr", "impute", "knitr", "limma", "Matrix", "matrixStats", "MultiAssayExperiment", "Rcpp", "readr", "reshape2", "rmarkdown", "tibble"] + "depends": ["BiocFileCache", "ComplexHeatmap", "DT", "Matrix", "MultiAssayExperiment", "Rcpp", "callr", "circlize", "curatedTCGAData", "doParallel", "dplyr", "foreach", "ggplot2", "glmnet", "gridExtra", "httr", "impute", "knitr", "limma", "matrixStats", "readr", "reshape2", "rmarkdown", "tibble"] }, "AMOUNTAIN": { "name": "AMOUNTAIN", @@ -91,25 +91,25 @@ "name": "ANCOMBC", "version": "2.6.0", "sha256": "14jdfcv3hghl1z2f7zj2mdqdyblz5sn4l1iwh8bhvih86cpigb58", - "depends": ["CVXR", "DescTools", "doParallel", "doRNG", "energy", "foreach", "gtools", "Hmisc", "lme4", "lmerTest", "MASS", "Matrix", "mia", "multcomp", "nloptr", "Rdpack", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TreeSummarizedExperiment"] + "depends": ["CVXR", "DescTools", "Hmisc", "MASS", "Matrix", "Rdpack", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TreeSummarizedExperiment", "doParallel", "doRNG", "energy", "foreach", "gtools", "lme4", "lmerTest", "mia", "multcomp", "nloptr"] }, "ANF": { "name": "ANF", "version": "1.26.0", "sha256": "00s2rlkh5snqmvlz5a21ilmm0ngh4g362y7iayr6f78nh8gwp617", - "depends": ["Biobase", "igraph", "MASS", "RColorBrewer", "survival"] + "depends": ["Biobase", "MASS", "RColorBrewer", "igraph", "survival"] }, "APAlyzer": { "name": "APAlyzer", "version": "1.18.0", "sha256": "102zs1rlz58dzvrgidf7cvq4wcmk6sffc9fv4b0xlqk5d6il32w4", - "depends": ["DESeq2", "dplyr", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggrepel", "HybridMTest", "repmis", "Rsamtools", "Rsubread", "rtracklayer", "SummarizedExperiment", "tidyr", "VariantAnnotation"] + "depends": ["DESeq2", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "HybridMTest", "Rsamtools", "Rsubread", "SummarizedExperiment", "VariantAnnotation", "dplyr", "ggplot2", "ggrepel", "repmis", "rtracklayer", "tidyr"] }, "APL": { "name": "APL", "version": "1.8.0", "sha256": "1mkm9aad0qamqs7595mqcbz37qz4ykn0y24wsl3ngj6ifyfxf643", - "depends": ["ggplot2", "ggrepel", "magrittr", "Matrix", "org_Hs_eg_db", "org_Mm_eg_db", "plotly", "reticulate", "rlang", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "topGO", "viridisLite"] + "depends": ["Matrix", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "ggrepel", "magrittr", "org_Hs_eg_db", "org_Mm_eg_db", "plotly", "reticulate", "rlang", "topGO", "viridisLite"] }, "ARRmNormalization": { "name": "ARRmNormalization", @@ -139,7 +139,7 @@ "name": "ASICS", "version": "2.20.1", "sha256": "0halznbl3bflnn38rh9h5a5f0dsc88n6x6kwdffbpnin9i192q1k", - "depends": ["BiocParallel", "ggplot2", "glmnet", "gridExtra", "Matrix", "mvtnorm", "PepsNMR", "plyr", "quadprog", "ropls", "SummarizedExperiment", "zoo"] + "depends": ["BiocParallel", "Matrix", "PepsNMR", "SummarizedExperiment", "ggplot2", "glmnet", "gridExtra", "mvtnorm", "plyr", "quadprog", "ropls", "zoo"] }, "ASSET": { "name": "ASSET", @@ -151,43 +151,43 @@ "name": "ASSIGN", "version": "1.40.0", "sha256": "1aq302awy940jrc1hnsf0rn05y4fg5m9aljsl1mclxxig6b8mrd2", - "depends": ["ggplot2", "gplots", "msm", "Rlab", "sva", "yaml"] + "depends": ["Rlab", "ggplot2", "gplots", "msm", "sva", "yaml"] }, "ASURAT": { "name": "ASURAT", "version": "1.8.0", "sha256": "1fjzmvc4if1kqhwzhd38l5ryvk2qg3001jwapbnkfagxkhmnwymg", - "depends": ["circlize", "cluster", "ComplexHeatmap", "plot3D", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circlize", "cluster", "plot3D"] }, "ASpli": { "name": "ASpli", "version": "2.14.0", "sha256": "1br4apbc3zn06ilg8fjb8xcxaimz4h7rnx9i60ak4wnpvgzgbyh2", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocStyle", "data_table", "DT", "edgeR", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "htmltools", "igraph", "IRanges", "limma", "MASS", "pbmcapply", "Rsamtools", "S4Vectors", "tidyr", "txdbmaker", "UpSetR"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocStyle", "DT", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "MASS", "Rsamtools", "S4Vectors", "UpSetR", "data_table", "edgeR", "htmltools", "igraph", "limma", "pbmcapply", "tidyr", "txdbmaker"] }, "ATACCoGAPS": { "name": "ATACCoGAPS", "version": "1.6.0", "sha256": "09h32q9y7z65ck33rwqzw2wkl8l6016s0sdkhf2g094yxhkz26rh", - "depends": ["BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Mmusculus_UCSC_mm10", "chromVAR", "CoGAPS", "dplyr", "fgsea", "GeneOverlap", "GenomicFeatures", "GenomicRanges", "gplots", "gtools", "Homo_sapiens", "IRanges", "JASPAR2016", "motifmatchr", "msigdbr", "Mus_musculus", "projectR", "rGREAT", "stringr", "TFBSTools", "tidyverse"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Mmusculus_UCSC_mm10", "CoGAPS", "GeneOverlap", "GenomicFeatures", "GenomicRanges", "Homo_sapiens", "IRanges", "JASPAR2016", "Mus_musculus", "TFBSTools", "chromVAR", "dplyr", "fgsea", "gplots", "gtools", "motifmatchr", "msigdbr", "projectR", "rGREAT", "stringr", "tidyverse"] }, "ATACseqQC": { "name": "ATACseqQC", "version": "1.28.0", "sha256": "0licdpzhh6xlma0hnvs4rr4bjr5q4q3g18kipf0is47zj4l91smy", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "ChIPpeakAnno", "edgeR", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "GenomicScores", "IRanges", "KernSmooth", "limma", "motifStack", "preseqR", "randomForest", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "ChIPpeakAnno", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "GenomicScores", "IRanges", "KernSmooth", "Rsamtools", "S4Vectors", "edgeR", "limma", "motifStack", "preseqR", "randomForest", "rtracklayer"] }, "ATACseqTFEA": { "name": "ATACseqTFEA", "version": "1.6.0", "sha256": "1dfw6vb0fx02xx21msvy8iarwmn41p1l3ryx1zs39668bz6zz06j", - "depends": ["BiocGenerics", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "ggrepel", "IRanges", "limma", "Matrix", "motifmatchr", "pracma", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "TFBSTools"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Matrix", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TFBSTools", "dplyr", "ggplot2", "ggrepel", "limma", "motifmatchr", "pracma", "rtracklayer"] }, "AUCell": { "name": "AUCell", "version": "1.26.0", "sha256": "009ha82393giapvmfw2mi8pmi88f61mr69qj64y5vphcr1smvcl0", - "depends": ["BiocGenerics", "data_table", "DelayedArray", "DelayedMatrixStats", "GSEABase", "Matrix", "mixtools", "R_utils", "SummarizedExperiment"] + "depends": ["BiocGenerics", "DelayedArray", "DelayedMatrixStats", "GSEABase", "Matrix", "R_utils", "SummarizedExperiment", "data_table", "mixtools"] }, "AWFisher": { "name": "AWFisher", @@ -199,7 +199,7 @@ "name": "AffiXcan", "version": "1.22.0", "sha256": "1241vpqkv4p3yarr6fsz1a7awvc4ff7q75ia3ra7vgkvg7gx9p93", - "depends": ["BiocParallel", "crayon", "MultiAssayExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "MultiAssayExperiment", "SummarizedExperiment", "crayon"] }, "AffyRNADegradation": { "name": "AffyRNADegradation", @@ -211,13 +211,13 @@ "name": "AgiMicroRna", "version": "2.54.0", "sha256": "1bm8rxfdgd0fx48fi70by08qr855jv6r4xcr7al2v9akv6vphws2", - "depends": ["affy", "affycoretools", "Biobase", "limma", "preprocessCore"] + "depends": ["Biobase", "affy", "affycoretools", "limma", "preprocessCore"] }, "AllelicImbalance": { "name": "AllelicImbalance", "version": "1.42.0", "sha256": "0mbmw450gdlr46ggvhrgimkbir3lg5dnqsfadn7yyrn7wkcr302f", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "gridExtra", "Gviz", "IRanges", "lattice", "latticeExtra", "nlme", "Rsamtools", "S4Vectors", "seqinr", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "gridExtra", "lattice", "latticeExtra", "nlme", "seqinr"] }, "AlphaBeta": { "name": "AlphaBeta", @@ -229,25 +229,25 @@ "name": "AlphaMissenseR", "version": "1.0.2", "sha256": "1y8dzcrjqmqagnl4jiwcsfkj28n544j2d6li0ga6rrqmjwrnxzv0", - "depends": ["BiocBaseUtils", "BiocFileCache", "curl", "DBI", "dplyr", "duckdb", "memoise", "rjsoncons", "rlang", "spdl", "whisker"] + "depends": ["BiocBaseUtils", "BiocFileCache", "DBI", "curl", "dplyr", "duckdb", "memoise", "rjsoncons", "rlang", "spdl", "whisker"] }, "AlpsNMR": { "name": "AlpsNMR", "version": "4.6.0", "sha256": "1c8ynw9424ygc4wj4drbm9gdkdqwgb5z7p72zk3x5zh3zqai0d1d", - "depends": ["baseline", "BiocParallel", "cli", "dplyr", "fs", "future", "generics", "ggplot2", "glue", "htmltools", "magrittr", "matrixStats", "mixOmics", "pcaPP", "purrr", "readxl", "reshape2", "rlang", "rmarkdown", "scales", "signal", "speaq", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["BiocParallel", "baseline", "cli", "dplyr", "fs", "future", "generics", "ggplot2", "glue", "htmltools", "magrittr", "matrixStats", "mixOmics", "pcaPP", "purrr", "readxl", "reshape2", "rlang", "rmarkdown", "scales", "signal", "speaq", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "AnVIL": { "name": "AnVIL", - "version": "1.16.0", - "sha256": "0859gsgvljl2adjz4md52z4k1bcqh24i5xdfqddflw4gaq1zlm69", - "depends": ["BiocBaseUtils", "BiocManager", "dplyr", "DT", "futile_logger", "htmltools", "httr", "jsonlite", "miniUI", "rapiclient", "rlang", "shiny", "tibble", "tidyr", "tidyselect", "yaml"] + "version": "1.16.1", + "sha256": "0i4skg2bpj0rbb3fbaprfs4d4nxg9aj8d6pni4a3k0wip3dw1cf9", + "depends": ["BiocBaseUtils", "BiocManager", "DT", "dplyr", "futile_logger", "htmltools", "httr", "jsonlite", "miniUI", "rapiclient", "rlang", "shiny", "tibble", "tidyr", "tidyselect", "yaml"] }, "AnVILBilling": { "name": "AnVILBilling", "version": "1.14.0", "sha256": "0z05zp70l7r1wxf1s825gsgaj6kzj4fgw3962gp0z90whz398jyf", - "depends": ["bigrquery", "DBI", "dplyr", "DT", "ggplot2", "lubridate", "magrittr", "plotly", "shiny", "shinytoastr"] + "depends": ["DBI", "DT", "bigrquery", "dplyr", "ggplot2", "lubridate", "magrittr", "plotly", "shiny", "shinytoastr"] }, "AnVILPublish": { "name": "AnVILPublish", @@ -265,13 +265,13 @@ "name": "Anaquin", "version": "2.28.0", "sha256": "0hfvwzkfy6bm2ffghax5b228k2l6wf8zq82q13h6bxfps4wz0jgb", - "depends": ["DESeq2", "ggplot2", "knitr", "locfit", "plyr", "qvalue", "ROCR"] + "depends": ["DESeq2", "ROCR", "ggplot2", "knitr", "locfit", "plyr", "qvalue"] }, "AneuFinder": { "name": "AneuFinder", "version": "1.32.0", "sha256": "0dgmg0slyrh025wgz299dzzmpirlmdhmabxspci1qfarakw5yicf", - "depends": ["AneuFinderData", "bamsignals", "BiocGenerics", "Biostrings", "cowplot", "DNAcopy", "doParallel", "ecp", "foreach", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggdendro", "ggplot2", "ggrepel", "IRanges", "mclust", "reshape2", "Rsamtools", "S4Vectors"] + "depends": ["AneuFinderData", "BiocGenerics", "Biostrings", "DNAcopy", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "bamsignals", "cowplot", "doParallel", "ecp", "foreach", "ggdendro", "ggplot2", "ggrepel", "mclust", "reshape2"] }, "AnnotationDbi": { "name": "AnnotationDbi", @@ -295,13 +295,13 @@ "name": "AnnotationHub", "version": "3.12.0", "sha256": "1da2n13j2xysnd175zi7s6zm8yllnp0k59vygkx9id85jcldqf51", - "depends": ["AnnotationDbi", "BiocFileCache", "BiocGenerics", "BiocManager", "BiocVersion", "curl", "dplyr", "httr", "rappdirs", "RSQLite", "S4Vectors", "yaml"] + "depends": ["AnnotationDbi", "BiocFileCache", "BiocGenerics", "BiocManager", "BiocVersion", "RSQLite", "S4Vectors", "curl", "dplyr", "httr", "rappdirs", "yaml"] }, "AnnotationHubData": { "name": "AnnotationHubData", "version": "1.34.0", "sha256": "0wcbghjvgr8sx1qg9kyjxb7znkxhihy7jvzycrv4pyq746154xbi", - "depends": ["AnnotationDbi", "AnnotationForge", "AnnotationHub", "Biobase", "BiocCheck", "BiocGenerics", "BiocManager", "biocViews", "Biostrings", "DBI", "futile_logger", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "graph", "IRanges", "jsonlite", "OrganismDbi", "RCurl", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "XML"] + "depends": ["AnnotationDbi", "AnnotationForge", "AnnotationHub", "Biobase", "BiocCheck", "BiocGenerics", "BiocManager", "Biostrings", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "OrganismDbi", "RCurl", "RSQLite", "Rsamtools", "S4Vectors", "XML", "biocViews", "futile_logger", "graph", "jsonlite", "rtracklayer"] }, "ArrayExpress": { "name": "ArrayExpress", @@ -331,19 +331,19 @@ "name": "BANDITS", "version": "1.20.0", "sha256": "1iizs0bvs7rbkwv3vs6xk26jy222kql80fp6cki0qs9h9igpzk5h", - "depends": ["BiocParallel", "data_table", "doParallel", "doRNG", "DRIMSeq", "foreach", "ggplot2", "MASS", "R_utils", "Rcpp", "RcppArmadillo"] + "depends": ["BiocParallel", "DRIMSeq", "MASS", "R_utils", "Rcpp", "RcppArmadillo", "data_table", "doParallel", "doRNG", "foreach", "ggplot2"] }, "BASiCS": { "name": "BASiCS", "version": "2.16.0", "sha256": "0rcc8na0nravf2687bcvbaklwa0z8b43lvdy0nf9xvfrfpr1zjnw", - "depends": ["assertthat", "Biobase", "BiocGenerics", "BiocParallel", "coda", "cowplot", "ggExtra", "ggplot2", "hexbin", "MASS", "Matrix", "matrixStats", "posterior", "Rcpp", "RcppArmadillo", "reshape2", "S4Vectors", "scran", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "viridis"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "assertthat", "coda", "cowplot", "ggExtra", "ggplot2", "hexbin", "matrixStats", "posterior", "reshape2", "scran", "scuttle", "viridis"] }, "BASiCStan": { "name": "BASiCStan", "version": "1.6.0", "sha256": "1q6lhmdy19v30aq9hzphxicq6blyzr6z94wcqsqzwb0xjij1z5f9", - "depends": ["BASiCS", "BH", "glmGamPoi", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "scran", "scuttle", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment"] + "depends": ["BASiCS", "BH", "Rcpp", "RcppEigen", "RcppParallel", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment", "glmGamPoi", "rstan", "rstantools", "scran", "scuttle"] }, "BBCAnalyzer": { "name": "BBCAnalyzer", @@ -361,31 +361,31 @@ "name": "BEARscc", "version": "1.24.0", "sha256": "0f66pbhf4fz66021k7f6rlwzxdikznbhjqqpxwrj07yg65q5sd1l", - "depends": ["data_table", "ggplot2", "SingleCellExperiment"] + "depends": ["SingleCellExperiment", "data_table", "ggplot2"] }, "BEAT": { "name": "BEAT", "version": "1.42.0", "sha256": "0s63nwf21ai1gys0dzjsjqy64sal7dpp040f0jqskyf2y6gdf9v9", - "depends": ["Biostrings", "BSgenome", "GenomicRanges", "ShortRead"] + "depends": ["BSgenome", "Biostrings", "GenomicRanges", "ShortRead"] }, "BERT": { "name": "BERT", "version": "1.0.0", "sha256": "1n2v8sdvh40sqz8gpzszwhp2w6npxnl48bsp9l0bzz8w148cwyk8", - "depends": ["BiocParallel", "cluster", "comprehenr", "foreach", "invgamma", "iterators", "janitor", "limma", "logging", "SummarizedExperiment", "sva"] + "depends": ["BiocParallel", "SummarizedExperiment", "cluster", "comprehenr", "foreach", "invgamma", "iterators", "janitor", "limma", "logging", "sva"] }, "BEclear": { "name": "BEclear", "version": "2.20.0", "sha256": "17i93h0q1fwl8wymmlgjsh8hbnaws6baf4jid5k579aap32zb5ha", - "depends": ["abind", "BiocParallel", "data_table", "dixonTest", "futile_logger", "ids", "Matrix", "Rcpp", "Rdpack"] + "depends": ["BiocParallel", "Matrix", "Rcpp", "Rdpack", "abind", "data_table", "dixonTest", "futile_logger", "ids"] }, "BG2": { "name": "BG2", "version": "1.4.0", "sha256": "0nby9b7kha4bz2x7a8b9nk78qai98m76csndnaikcpg79mpzygv5", - "depends": ["caret", "GA", "MASS", "Matrix", "memoise"] + "depends": ["GA", "MASS", "Matrix", "caret", "memoise"] }, "BHC": { "name": "BHC", @@ -397,49 +397,49 @@ "name": "BLMA", "version": "1.28.0", "sha256": "1b6hcjy6dv55cpprm8ylz7akl4vyvi6lky0qc31q6skxxdp3266k", - "depends": ["Biobase", "graph", "GSA", "limma", "metafor", "PADOG", "ROntoTools"] + "depends": ["Biobase", "GSA", "PADOG", "ROntoTools", "graph", "limma", "metafor"] }, "BOBaFIT": { "name": "BOBaFIT", "version": "1.8.0", "sha256": "18xzy91rblcdc4x8c4cxi5b03cskdwjpryzajhzycdpdb4hfg89q", - "depends": ["dplyr", "GenomicRanges", "ggbio", "ggforce", "ggplot2", "magrittr", "NbClust", "plyranges", "stringr", "tidyr"] + "depends": ["GenomicRanges", "NbClust", "dplyr", "ggbio", "ggforce", "ggplot2", "magrittr", "plyranges", "stringr", "tidyr"] }, "BPRMeth": { "name": "BPRMeth", "version": "1.30.0", "sha256": "0ax88n7i72lhlrrq4zc6ay5mg9ds37qlg10xafgkilgliz309ykn", - "depends": ["assertthat", "BiocStyle", "cowplot", "data_table", "doParallel", "e1071", "earth", "foreach", "GenomicRanges", "ggplot2", "IRanges", "kernlab", "magrittr", "MASS", "matrixcalc", "mvtnorm", "randomForest", "Rcpp", "RcppArmadillo", "S4Vectors", "truncnorm"] + "depends": ["BiocStyle", "GenomicRanges", "IRanges", "MASS", "Rcpp", "RcppArmadillo", "S4Vectors", "assertthat", "cowplot", "data_table", "doParallel", "e1071", "earth", "foreach", "ggplot2", "kernlab", "magrittr", "matrixcalc", "mvtnorm", "randomForest", "truncnorm"] }, "BRAIN": { "name": "BRAIN", "version": "1.50.0", "sha256": "0l712ilc308amafhbl9g6g6jvn1px0x0wlc53y2ql397l9bivva3", - "depends": ["Biostrings", "lattice", "PolynomF"] + "depends": ["Biostrings", "PolynomF", "lattice"] }, "BREW3R_r": { "name": "BREW3R.r", "version": "1.0.1", "sha256": "0i0r5sryvq721dlffs9d092776jx0j7r9mfiyi24glgqalmrslag", - "depends": ["GenomicRanges", "rlang", "S4Vectors"] + "depends": ["GenomicRanges", "S4Vectors", "rlang"] }, "BSgenome": { "name": "BSgenome", "version": "1.72.0", "sha256": "1pjbkakrycvaifl7xrmri2h94zc1ap8a9d1q4c83qji3xa21cm4q", - "depends": ["BiocGenerics", "BiocIO", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "matrixStats", "Rsamtools", "rtracklayer", "S4Vectors", "XVector"] + "depends": ["BiocGenerics", "BiocIO", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "XVector", "matrixStats", "rtracklayer"] }, "BSgenomeForge": { "name": "BSgenomeForge", "version": "1.4.0", "sha256": "0100y9lqj0xjz1ycazn4v74m7h26fxdbb03xa7ryvpdq61b0gc8p", - "depends": ["Biobase", "BiocGenerics", "BiocIO", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocIO", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "rtracklayer"] }, "BUMHMM": { "name": "BUMHMM", "version": "1.28.0", "sha256": "0c35x7bjp97qiahykkvk8krsnvy1w29qvrb6x8wa4vwn58a56naa", - "depends": ["Biostrings", "devtools", "gtools", "IRanges", "stringi", "SummarizedExperiment"] + "depends": ["Biostrings", "IRanges", "SummarizedExperiment", "devtools", "gtools", "stringi"] }, "BUS": { "name": "BUS", @@ -451,37 +451,37 @@ "name": "BUScorrect", "version": "1.22.0", "sha256": "1crq6h9s3kxk1z7xpapq1jwwqwpa2fznhykm84k2zjl8jzvc7lmi", - "depends": ["gplots", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "gplots"] }, "BUSpaRse": { "name": "BUSpaRse", - "version": "1.18.0", - "sha256": "08lq6g6sh5vgr4nn3cmn5gz735zsf8lwhhlqpg9l3d8lzfcb22d5", - "depends": ["AnnotationDbi", "AnnotationFilter", "BH", "BiocGenerics", "biomaRt", "Biostrings", "BSgenome", "dplyr", "ensembldb", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "Matrix", "plyranges", "Rcpp", "RcppArmadillo", "RcppProgress", "S4Vectors", "stringr", "tibble", "tidyr", "zeallot"] + "version": "1.18.1", + "sha256": "0dvs4c47v27ndc7xvpzx1acrh9v6dw99nz21lf1q7d0liiy26iyb", + "depends": ["AnnotationDbi", "AnnotationFilter", "BH", "BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "S4Vectors", "biomaRt", "dplyr", "ensembldb", "ggplot2", "magrittr", "plyranges", "stringr", "tibble", "tidyr", "zeallot"] }, "BUSseq": { "name": "BUSseq", "version": "1.10.0", "sha256": "19ajpfgz3aj1p6955z128smanna1gff6dfgh7dz8vhjyyz5nbi1q", - "depends": ["gplots", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "gplots"] }, "BaalChIP": { "name": "BaalChIP", "version": "1.30.0", "sha256": "1xm6czgbfz2rjrz5996d0n7xmlh9pd1mw9i8ac66pmn5fi44pbz2", - "depends": ["coda", "doBy", "doParallel", "foreach", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "reshape2", "Rsamtools", "scales"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "coda", "doBy", "doParallel", "foreach", "ggplot2", "reshape2", "scales"] }, "BadRegionFinder": { "name": "BadRegionFinder", "version": "1.32.0", "sha256": "1hs1mv8gj4w0wk6sw6r08j237vw3lhjrv9zip5nk6l1g1r0pg597", - "depends": ["biomaRt", "GenomicRanges", "Rsamtools", "S4Vectors", "VariantAnnotation"] + "depends": ["GenomicRanges", "Rsamtools", "S4Vectors", "VariantAnnotation", "biomaRt"] }, "Banksy": { "name": "Banksy", "version": "1.0.0", "sha256": "1qz5nhf2qcdwcbi4kbwdjgbxpql8w5391cnb8i73gj54chc8bvn1", - "depends": ["aricode", "data_table", "dbscan", "igraph", "irlba", "leidenAlg", "matrixStats", "mclust", "RcppHungarian", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "uwot"] + "depends": ["RcppHungarian", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "aricode", "data_table", "dbscan", "igraph", "irlba", "leidenAlg", "matrixStats", "mclust", "uwot"] }, "BaseSpaceR": { "name": "BaseSpaceR", @@ -493,7 +493,7 @@ "name": "Basic4Cseq", "version": "1.40.0", "sha256": "0ipxhdsqa8q49d2i17kvwyn6w2rpyl9jmq9bhch7cjawykjla5kf", - "depends": ["Biostrings", "BSgenome_Ecoli_NCBI_20080805", "caTools", "GenomicAlignments", "GenomicRanges", "RCircos"] + "depends": ["BSgenome_Ecoli_NCBI_20080805", "Biostrings", "GenomicAlignments", "GenomicRanges", "RCircos", "caTools"] }, "BasicSTARRseq": { "name": "BasicSTARRseq", @@ -505,7 +505,7 @@ "name": "BatchQC", "version": "2.0.0", "sha256": "1kijj3ivlrwk4490jsb7vsrc7kmx32hla52cg3zb3vj6l5cwq7g6", - "depends": ["data_table", "DESeq2", "dplyr", "EBSeq", "ggdendro", "ggnewscale", "ggplot2", "limma", "matrixStats", "pheatmap", "RColorBrewer", "reader", "reshape2", "scran", "shiny", "SummarizedExperiment", "sva", "tibble", "tidyr", "tidyverse"] + "depends": ["DESeq2", "EBSeq", "RColorBrewer", "SummarizedExperiment", "data_table", "dplyr", "ggdendro", "ggnewscale", "ggplot2", "limma", "matrixStats", "pheatmap", "reader", "reshape2", "scran", "shiny", "sva", "tibble", "tidyr", "tidyverse"] }, "BayesKnockdown": { "name": "BayesKnockdown", @@ -517,7 +517,7 @@ "name": "BayesSpace", "version": "1.14.0", "sha256": "0q1haqsyc61yxz1n197sv3s6csjpns4fi288kf58nnf5jgdwnyx5", - "depends": ["assertthat", "BiocFileCache", "BiocSingular", "coda", "DirichletReg", "ggplot2", "Matrix", "mclust", "purrr", "Rcpp", "RcppArmadillo", "RcppDist", "RcppProgress", "RCurl", "rhdf5", "S4Vectors", "scales", "scater", "scran", "SingleCellExperiment", "SummarizedExperiment", "xgboost"] + "depends": ["BiocFileCache", "BiocSingular", "DirichletReg", "Matrix", "RCurl", "Rcpp", "RcppArmadillo", "RcppDist", "RcppProgress", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "assertthat", "coda", "ggplot2", "mclust", "purrr", "rhdf5", "scales", "scater", "scran", "xgboost"] }, "BeadDataPackR": { "name": "BeadDataPackR", @@ -525,11 +525,17 @@ "sha256": "0wz3prri0mfjczmb432faxfjc99wg4lq26l3a60rmxyxq8mcnpkv", "depends": [] }, + "BgeeCall": { + "name": "BgeeCall", + "version": "1.20.1", + "sha256": "02k83a01fb4gydnw81j2vc3d1m92y0n44bskbdrlm7cb1zscvc13", + "depends": ["Biostrings", "GenomicFeatures", "biomaRt", "data_table", "dplyr", "jsonlite", "rhdf5", "rslurm", "rtracklayer", "sjmisc", "txdbmaker", "tximport"] + }, "BgeeDB": { "name": "BgeeDB", "version": "2.30.0", "sha256": "1jbb93inv7z0i8b1jr6ax98gqkqn73m86hj61irgyysk7hn4bbg6", - "depends": ["Biobase", "curl", "data_table", "digest", "dplyr", "graph", "R_utils", "RCurl", "RSQLite", "tidyr", "topGO"] + "depends": ["Biobase", "RCurl", "RSQLite", "R_utils", "curl", "data_table", "digest", "dplyr", "graph", "tidyr", "topGO"] }, "BiFET": { "name": "BiFET", @@ -541,19 +547,19 @@ "name": "BiGGR", "version": "1.40.0", "sha256": "1ja5j9753rgx61jwkax0mzkxh7ybh3m4ampkr5ikw3afda23wg1z", - "depends": ["hyperdraw", "hypergraph", "LIM", "limSolve", "rsbml", "stringr"] + "depends": ["LIM", "hyperdraw", "hypergraph", "limSolve", "rsbml", "stringr"] }, "BiRewire": { "name": "BiRewire", "version": "3.36.0", "sha256": "1l3hkq6n7i9j82aym4ngwablj8jqb70a7y6skx0rjkflya6wbim7", - "depends": ["igraph", "Matrix", "Rtsne", "slam"] + "depends": ["Matrix", "Rtsne", "igraph", "slam"] }, "BiSeq": { "name": "BiSeq", "version": "1.44.0", "sha256": "12nkdaz54ga133v38mmqaf3xcsx7ps2rcxxvni100vsk93hv155z", - "depends": ["betareg", "Biobase", "BiocGenerics", "Formula", "GenomeInfoDb", "GenomicRanges", "globaltest", "IRanges", "lokern", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "Formula", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "betareg", "globaltest", "lokern", "rtracklayer"] }, "BicARE": { "name": "BicARE", @@ -565,7 +571,7 @@ "name": "BindingSiteFinder", "version": "2.2.0", "sha256": "1icgz7wfayqzr1wd0n7sb71bh149d4d1m7rh5s5ap07llnn7vsq1", - "depends": ["ComplexHeatmap", "dplyr", "forcats", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggdist", "ggforce", "ggplot2", "IRanges", "kableExtra", "lifecycle", "matrixStats", "plyr", "RColorBrewer", "rlang", "rtracklayer", "S4Vectors", "tibble", "tidyr"] + "depends": ["ComplexHeatmap", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "dplyr", "forcats", "ggdist", "ggforce", "ggplot2", "kableExtra", "lifecycle", "matrixStats", "plyr", "rlang", "rtracklayer", "tibble", "tidyr"] }, "BioCartaImage": { "name": "BioCartaImage", @@ -583,31 +589,31 @@ "name": "BioMVCClass", "version": "1.72.0", "sha256": "0dfdksk3nc6pzw21sbd4cdqr05489qh4984wv0f906hyb52waxk2", - "depends": ["Biobase", "graph", "MVCClass", "Rgraphviz"] + "depends": ["Biobase", "MVCClass", "Rgraphviz", "graph"] }, "BioNAR": { "name": "BioNAR", - "version": "1.6.0", - "sha256": "1airs789p970v5j4nfmsvba70r3yadc4rw3z3sykqnc1qxzinvxq", - "depends": ["AnnotationDbi", "clusterCons", "cowplot", "data_table", "dplyr", "fgsea", "ggplot2", "ggrepel", "GO_db", "igraph", "latex2exp", "Matrix", "minpack_lm", "org_Hs_eg_db", "poweRlaw", "Rdpack", "RSpectra", "rSpectral", "scales", "stringr", "viridis", "WGCNA"] + "version": "1.6.3", + "sha256": "0gr3pf34xgs778bfndmml9df7l0w6ypa8d83h31krlxzd1h4wz0h", + "depends": ["AnnotationDbi", "GO_db", "Matrix", "RSpectra", "Rdpack", "WGCNA", "clusterCons", "cowplot", "data_table", "dplyr", "fgsea", "ggplot2", "ggrepel", "igraph", "latex2exp", "minpack_lm", "org_Hs_eg_db", "poweRlaw", "rSpectral", "scales", "stringr", "viridis"] }, "BioNERO": { "name": "BioNERO", "version": "1.12.0", "sha256": "02jqlpd31mhxbvksj7ny34f6dv8skkkr76lkiaj5gm078kfr0zx5", - "depends": ["BiocParallel", "ComplexHeatmap", "dynamicTreeCut", "GENIE3", "ggdendro", "ggnetwork", "ggplot2", "ggrepel", "igraph", "intergraph", "matrixStats", "minet", "NetRep", "patchwork", "RColorBrewer", "reshape2", "rlang", "SummarizedExperiment", "sva", "WGCNA"] + "depends": ["BiocParallel", "ComplexHeatmap", "GENIE3", "NetRep", "RColorBrewer", "SummarizedExperiment", "WGCNA", "dynamicTreeCut", "ggdendro", "ggnetwork", "ggplot2", "ggrepel", "igraph", "intergraph", "matrixStats", "minet", "patchwork", "reshape2", "rlang", "sva"] }, "BioNet": { "name": "BioNet", "version": "1.64.0", "sha256": "0lpqvm0cx7pnb99jh7na49x10w2v04xydiwxn9l41ngxysp8v0h6", - "depends": ["AnnotationDbi", "Biobase", "graph", "igraph", "RBGL"] + "depends": ["AnnotationDbi", "Biobase", "RBGL", "graph", "igraph"] }, "BioQC": { "name": "BioQC", "version": "1.32.0", "sha256": "14yrqf5wl9r596zvlpf4y48nykg0gwzlxfgi3kdx0i5pfgvi43vk", - "depends": ["Biobase", "edgeR", "Rcpp"] + "depends": ["Biobase", "Rcpp", "edgeR"] }, "Biobase": { "name": "Biobase", @@ -625,7 +631,7 @@ "name": "BiocBook", "version": "1.2.0", "sha256": "0rdsx2slwp69l6svsaj3pndd6bv318jkla5j84avwgfi63wks092", - "depends": ["available", "BiocGenerics", "cli", "dplyr", "gert", "gh", "gitcreds", "glue", "httr", "purrr", "quarto", "renv", "rlang", "rprojroot", "stringr", "tibble", "usethis", "yaml"] + "depends": ["BiocGenerics", "available", "cli", "dplyr", "gert", "gh", "gitcreds", "glue", "httr", "purrr", "quarto", "renv", "rlang", "rprojroot", "stringr", "tibble", "usethis", "yaml"] }, "BiocCheck": { "name": "BiocCheck", @@ -637,13 +643,13 @@ "name": "BiocFHIR", "version": "1.6.0", "sha256": "0zw59xb6jxxqg9aiwn6h4ak4056b64y22irkysl51rvdrb12n32h", - "depends": ["BiocBaseUtils", "dplyr", "DT", "graph", "jsonlite", "shiny", "tidyr", "visNetwork"] + "depends": ["BiocBaseUtils", "DT", "dplyr", "graph", "jsonlite", "shiny", "tidyr", "visNetwork"] }, "BiocFileCache": { "name": "BiocFileCache", "version": "2.12.0", "sha256": "0jv6hni5x91ssvz4ilhi3y6lylrw4w3xfk8ljmq6gjvyl886sw9f", - "depends": ["curl", "DBI", "dbplyr", "dplyr", "filelock", "httr", "RSQLite"] + "depends": ["DBI", "RSQLite", "curl", "dbplyr", "dplyr", "filelock", "httr"] }, "BiocGenerics": { "name": "BiocGenerics", @@ -655,13 +661,13 @@ "name": "BiocHail", "version": "1.4.0", "sha256": "1p8wkl31c7snv8l8zkmg2hf9pb2p0gif4gfgjia0npi91y2h5hfp", - "depends": ["basilisk", "BiocFileCache", "BiocGenerics", "dplyr", "reticulate"] + "depends": ["BiocFileCache", "BiocGenerics", "basilisk", "dplyr", "reticulate"] }, "BiocHubsShiny": { "name": "BiocHubsShiny", "version": "1.4.0", "sha256": "19ihc6fi04kbgmlvn5k1cjpckc03p5yfjpc3gjmmf3pn69qgljzf", - "depends": ["AnnotationHub", "DT", "ExperimentHub", "htmlwidgets", "S4Vectors", "shiny", "shinyAce", "shinyjs", "shinythemes", "shinytoastr"] + "depends": ["AnnotationHub", "DT", "ExperimentHub", "S4Vectors", "htmlwidgets", "shiny", "shinyAce", "shinyjs", "shinythemes", "shinytoastr"] }, "BiocIO": { "name": "BiocIO", @@ -679,7 +685,7 @@ "name": "BiocOncoTK", "version": "1.24.0", "sha256": "0h4cr7lrmbyx7kdj81s7ff75svr01rvzn54svqi93vjilawmpbm3", - "depends": ["bigrquery", "car", "ComplexHeatmap", "curatedTCGAData", "DBI", "dplyr", "DT", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggpubr", "graph", "httr", "IRanges", "magrittr", "MASS", "plyr", "Rgraphviz", "rjson", "S4Vectors", "scales", "shiny", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "DBI", "DT", "GenomicFeatures", "GenomicRanges", "IRanges", "MASS", "Rgraphviz", "S4Vectors", "SummarizedExperiment", "bigrquery", "car", "curatedTCGAData", "dplyr", "ggplot2", "ggpubr", "graph", "httr", "magrittr", "plyr", "rjson", "scales", "shiny"] }, "BiocParallel": { "name": "BiocParallel", @@ -691,30 +697,30 @@ "name": "BiocPkgTools", "version": "1.22.0", "sha256": "1nbzr1yjz65r0y8c312hnvagnc1pdgda4v6sxbpvlkl3z93jsy6x", - "depends": ["BiocFileCache", "BiocManager", "biocViews", "dplyr", "DT", "gh", "graph", "htmltools", "htmlwidgets", "httr", "igraph", "jsonlite", "magrittr", "RBGL", "readr", "rlang", "rorcid", "rvest", "stringr", "tibble", "xml2"] + "depends": ["BiocFileCache", "BiocManager", "DT", "RBGL", "biocViews", "dplyr", "gh", "graph", "htmltools", "htmlwidgets", "httr", "igraph", "jsonlite", "magrittr", "readr", "rlang", "rorcid", "rvest", "stringr", "tibble", "xml2"] }, "BiocSet": { "name": "BiocSet", "version": "1.18.0", "sha256": "1r1if1k7qgni3dk7gsl4vcyvd6hnhx94rcq5yi9w7dvyyrbvnwwa", - "depends": ["AnnotationDbi", "BiocIO", "dplyr", "KEGGREST", "ontologyIndex", "plyr", "rlang", "S4Vectors", "tibble", "tidyr"] + "depends": ["AnnotationDbi", "BiocIO", "KEGGREST", "S4Vectors", "dplyr", "ontologyIndex", "plyr", "rlang", "tibble", "tidyr"] }, "BiocSingular": { "name": "BiocSingular", "version": "1.20.0", "sha256": "1xl9wn3slj3ywjglb8zq2p0ifx4xwxbqsm99fjlf6hanfhmnxyay", - "depends": ["beachmat", "BiocGenerics", "BiocParallel", "DelayedArray", "irlba", "Matrix", "Rcpp", "rsvd", "S4Vectors", "ScaledMatrix"] + "depends": ["BiocGenerics", "BiocParallel", "DelayedArray", "Matrix", "Rcpp", "S4Vectors", "ScaledMatrix", "beachmat", "irlba", "rsvd"] }, "BiocSklearn": { "name": "BiocSklearn", "version": "1.26.0", "sha256": "19s38zpgdscbrqypyg17l1jw53x88lgkcrqg20gchfi6mig36a3w", - "depends": ["basilisk", "reticulate", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "basilisk", "reticulate"] }, "BiocStyle": { "name": "BiocStyle", - "version": "2.32.0", - "sha256": "1vm9wj4hzzjivdi6rnxyhxwqscdvbmc45w9zq17h3r53qnva530x", + "version": "2.32.1", + "sha256": "1m0nn2m548726w576mx8mx29xj428q1rkpn7z7a7m8kzgcvvgkkr", "depends": ["BiocManager", "bookdown", "knitr", "rmarkdown", "yaml"] }, "BiocVersion": { @@ -733,13 +739,13 @@ "name": "Biostrings", "version": "2.72.1", "sha256": "067vy2v7spbdsknvi0fcpdi085kn8v20pyrhkc7wy357v21h7hgs", - "depends": ["BiocGenerics", "crayon", "GenomeInfoDb", "IRanges", "S4Vectors", "XVector"] + "depends": ["BiocGenerics", "GenomeInfoDb", "IRanges", "S4Vectors", "XVector", "crayon"] }, "BloodGen3Module": { "name": "BloodGen3Module", "version": "1.12.0", "sha256": "0mksc9jfzcj255a01hg8gjrs6k2plkpfqgv951csldvy7vqrdkma", - "depends": ["circlize", "ComplexHeatmap", "ExperimentHub", "ggplot2", "gtools", "limma", "matrixStats", "preprocessCore", "randomcoloR", "reshape2", "SummarizedExperiment", "testthat", "V8"] + "depends": ["ComplexHeatmap", "ExperimentHub", "SummarizedExperiment", "V8", "circlize", "ggplot2", "gtools", "limma", "matrixStats", "preprocessCore", "randomcoloR", "reshape2", "testthat"] }, "BridgeDbR": { "name": "BridgeDbR", @@ -757,7 +763,7 @@ "name": "BubbleTree", "version": "2.34.0", "sha256": "0l69q8l6dacyqdbfdnxlg70f064xm8w5p07pi2x0baacxv8bs5d4", - "depends": ["Biobase", "BiocGenerics", "BiocStyle", "biovizBase", "dplyr", "e1071", "GenomicRanges", "ggplot2", "gridExtra", "gtable", "gtools", "IRanges", "limma", "magrittr", "plyr", "RColorBrewer", "WriteXLS"] + "depends": ["Biobase", "BiocGenerics", "BiocStyle", "GenomicRanges", "IRanges", "RColorBrewer", "WriteXLS", "biovizBase", "dplyr", "e1071", "ggplot2", "gridExtra", "gtable", "gtools", "limma", "magrittr", "plyr"] }, "BufferedMatrix": { "name": "BufferedMatrix", @@ -787,25 +793,25 @@ "name": "CAFE", "version": "1.40.0", "sha256": "1vq1yf78yfsfnsjpqb89zghzr677mdwvpi5zl3ikz2j5z40h1rjj", - "depends": ["affy", "annotate", "Biobase", "biovizBase", "GenomicRanges", "ggbio", "ggplot2", "gridExtra", "IRanges"] + "depends": ["Biobase", "GenomicRanges", "IRanges", "affy", "annotate", "biovizBase", "ggbio", "ggplot2", "gridExtra"] }, "CAGEfightR": { "name": "CAGEfightR", "version": "1.24.0", "sha256": "1i6q5bwg55d3iydcy3h6j9hg30581vvc592rs5cac310qxzcj8hj", - "depends": ["assertthat", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicInteractions", "GenomicRanges", "Gviz", "InteractionSet", "IRanges", "Matrix", "pryr", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicInteractions", "GenomicRanges", "Gviz", "IRanges", "InteractionSet", "Matrix", "S4Vectors", "SummarizedExperiment", "assertthat", "pryr", "rtracklayer"] }, "CAGEr": { "name": "CAGEr", "version": "2.10.0", "sha256": "1amx7l5y1v8ccmlpjmr9wm2dbc85xadx4ayy8m45vabi97j8nrp4", - "depends": ["BiocGenerics", "BiocParallel", "BSgenome", "CAGEfightR", "data_table", "DelayedArray", "DelayedMatrixStats", "formula_tools", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "gtools", "IRanges", "KernSmooth", "memoise", "MultiAssayExperiment", "plyr", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors", "som", "stringdist", "stringi", "SummarizedExperiment", "vegan", "VGAM"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "CAGEfightR", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "KernSmooth", "MultiAssayExperiment", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VGAM", "data_table", "formula_tools", "ggplot2", "gtools", "memoise", "plyr", "reshape2", "rtracklayer", "som", "stringdist", "stringi", "vegan"] }, "CAMERA": { "name": "CAMERA", "version": "1.60.0", "sha256": "1wcihfi7vzdb5xkk2r7cdb4pqdbnph01m3dsz126984rzplpcd44", - "depends": ["Biobase", "graph", "Hmisc", "igraph", "RBGL", "xcms"] + "depends": ["Biobase", "Hmisc", "RBGL", "graph", "igraph", "xcms"] }, "CARNIVAL": { "name": "CARNIVAL", @@ -817,19 +823,19 @@ "name": "CATALYST", "version": "1.28.0", "sha256": "168yfkqlg6af8ndlw4wzb9adg4lgkgkjbsi4a435ks0n4c9dycb7", - "depends": ["circlize", "ComplexHeatmap", "ConsensusClusterPlus", "cowplot", "data_table", "dplyr", "drc", "flowCore", "FlowSOM", "ggplot2", "ggrepel", "ggridges", "gridExtra", "Matrix", "matrixStats", "nnls", "purrr", "RColorBrewer", "reshape2", "Rtsne", "S4Vectors", "scales", "scater", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "ConsensusClusterPlus", "FlowSOM", "Matrix", "RColorBrewer", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circlize", "cowplot", "data_table", "dplyr", "drc", "flowCore", "ggplot2", "ggrepel", "ggridges", "gridExtra", "matrixStats", "nnls", "purrr", "reshape2", "scales", "scater"] }, "CBEA": { "name": "CBEA", "version": "1.4.0", "sha256": "0j43lvz55xawwk723rsfpir6vir5wbxpwslpk4x2frslf5i00mky", - "depends": ["BiocParallel", "BiocSet", "dplyr", "fitdistrplus", "generics", "glue", "goftest", "lmom", "magrittr", "mixtools", "Rcpp", "rlang", "SummarizedExperiment", "tibble", "tidyr", "TreeSummarizedExperiment"] + "depends": ["BiocParallel", "BiocSet", "Rcpp", "SummarizedExperiment", "TreeSummarizedExperiment", "dplyr", "fitdistrplus", "generics", "glue", "goftest", "lmom", "magrittr", "mixtools", "rlang", "tibble", "tidyr"] }, "CBNplot": { "name": "CBNplot", "version": "1.4.0", "sha256": "1n85clswpk1xxfq423sgk38qb9kjkjj2kghnxw8a4618vxypwsrv", - "depends": ["BiocFileCache", "bnlearn", "clusterProfiler", "depmap", "dplyr", "enrichplot", "ExperimentHub", "ggdist", "ggforce", "ggplot2", "ggraph", "graphite", "graphlayouts", "igraph", "magrittr", "oaqc", "org_Hs_eg_db", "patchwork", "purrr", "pvclust", "reshape2", "rlang", "Rmpfr", "stringr", "tidyr"] + "depends": ["BiocFileCache", "ExperimentHub", "Rmpfr", "bnlearn", "clusterProfiler", "depmap", "dplyr", "enrichplot", "ggdist", "ggforce", "ggplot2", "ggraph", "graphite", "graphlayouts", "igraph", "magrittr", "oaqc", "org_Hs_eg_db", "patchwork", "purrr", "pvclust", "reshape2", "rlang", "stringr", "tidyr"] }, "CCPROMISE": { "name": "CCPROMISE", @@ -841,19 +847,19 @@ "name": "CCPlotR", "version": "1.2.0", "sha256": "05qh8yqk2yv4vw314aflys7qn4kwhy839wj5cdw9iysaklkyjscg", - "depends": ["circlize", "ComplexHeatmap", "dplyr", "forcats", "ggbump", "ggh4x", "ggplot2", "ggraph", "ggtext", "igraph", "patchwork", "plyr", "RColorBrewer", "scales", "scatterpie", "stringr", "tibble", "tidyr", "viridis"] + "depends": ["ComplexHeatmap", "RColorBrewer", "circlize", "dplyr", "forcats", "ggbump", "ggh4x", "ggplot2", "ggraph", "ggtext", "igraph", "patchwork", "plyr", "scales", "scatterpie", "stringr", "tibble", "tidyr", "viridis"] }, "CDI": { "name": "CDI", "version": "1.2.0", "sha256": "0nc4s8prs6p0k7qp2lc5fzdqx177y1xamrwizldwi5p3yq1zq1nx", - "depends": ["BiocParallel", "ggplot2", "ggsci", "matrixStats", "reshape2", "Seurat", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "Seurat", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "ggsci", "matrixStats", "reshape2"] }, "CEMiTool": { "name": "CEMiTool", "version": "1.28.0", "sha256": "1pcyw8njyrcjriyzq52km0qhn1n288gqvn1qdkzx2yfv4a1i6rxk", - "depends": ["clusterProfiler", "data_table", "dplyr", "DT", "fastcluster", "fgsea", "ggdendro", "ggplot2", "ggpmisc", "ggrepel", "ggthemes", "gridExtra", "gtable", "htmltools", "igraph", "intergraph", "knitr", "matrixStats", "network", "pracma", "rmarkdown", "scales", "sna", "stringr", "WGCNA"] + "depends": ["DT", "WGCNA", "clusterProfiler", "data_table", "dplyr", "fastcluster", "fgsea", "ggdendro", "ggplot2", "ggpmisc", "ggrepel", "ggthemes", "gridExtra", "gtable", "htmltools", "igraph", "intergraph", "knitr", "matrixStats", "network", "pracma", "rmarkdown", "scales", "sna", "stringr"] }, "CFAssay": { "name": "CFAssay", @@ -895,25 +901,25 @@ "name": "CHETAH", "version": "1.20.0", "sha256": "19vb0c9kla6jn79v5sc8sig195lnzzhki2089pvjsy4gw2q3nmnh", - "depends": ["bioDist", "corrplot", "cowplot", "dendextend", "ggplot2", "pheatmap", "plotly", "reshape2", "S4Vectors", "shiny", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "bioDist", "corrplot", "cowplot", "dendextend", "ggplot2", "pheatmap", "plotly", "reshape2", "shiny"] }, "CHRONOS": { "name": "CHRONOS", "version": "1.32.0", "sha256": "06ynbgmzp820l85n25lrhks1vl1ccaf3giypgp59s79v496vps3x", - "depends": ["biomaRt", "circlize", "doParallel", "foreach", "graph", "igraph", "openxlsx", "RBGL", "RCurl", "rJava", "XML"] + "depends": ["RBGL", "RCurl", "XML", "biomaRt", "circlize", "doParallel", "foreach", "graph", "igraph", "openxlsx", "rJava"] }, "CIMICE": { "name": "CIMICE", "version": "1.12.0", "sha256": "18m6mb1r9s8cqi1lsignmf9p8q7qigazxyif14z6f1h5kdcs6707", - "depends": ["assertthat", "dplyr", "expm", "ggcorrplot", "ggplot2", "ggraph", "glue", "igraph", "maftools", "Matrix", "networkD3", "purrr", "tidygraph", "tidyr", "visNetwork"] + "depends": ["Matrix", "assertthat", "dplyr", "expm", "ggcorrplot", "ggplot2", "ggraph", "glue", "igraph", "maftools", "networkD3", "purrr", "tidygraph", "tidyr", "visNetwork"] }, "CINdex": { "name": "CINdex", "version": "1.32.0", "sha256": "1cgq0bcrgdwzxci47issdck4pz8pnbpfzz7i57mi0ga3jqih0g2i", - "depends": ["bitops", "dplyr", "GenomeInfoDb", "GenomicRanges", "gplots", "gridExtra", "IRanges", "png", "S4Vectors", "som", "stringr"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "bitops", "dplyr", "gplots", "gridExtra", "png", "som", "stringr"] }, "CMA": { "name": "CMA", @@ -931,13 +937,13 @@ "name": "CNEr", "version": "1.40.0", "sha256": "19kfh7p8zlb1nbwpsj6i1b7pqy829dij7n7iavznhxw44cmif6sv", - "depends": ["annotate", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "GO_db", "IRanges", "KEGGREST", "poweRlaw", "pwalign", "R_utils", "readr", "reshape2", "RSQLite", "rtracklayer", "S4Vectors", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "DBI", "GO_db", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "KEGGREST", "RSQLite", "R_utils", "S4Vectors", "XVector", "annotate", "ggplot2", "poweRlaw", "pwalign", "readr", "reshape2", "rtracklayer"] }, "CNORdt": { "name": "CNORdt", "version": "1.46.0", "sha256": "1f9d2jmqxcmzvwvshf8yni0j28y13cdb5w9z1mcl7f3gcd0vn3rx", - "depends": ["abind", "CellNOptR"] + "depends": ["CellNOptR", "abind"] }, "CNORfeeder": { "name": "CNORfeeder", @@ -967,61 +973,61 @@ "name": "CNVMetrics", "version": "1.8.0", "sha256": "1vf04v7sr4f8mizzvbr3q4w83vdb62mabg5pl5dh53zvhrrzk1hi", - "depends": ["BiocParallel", "GenomicRanges", "gridExtra", "IRanges", "magrittr", "pheatmap", "rBeta2009", "S4Vectors"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "S4Vectors", "gridExtra", "magrittr", "pheatmap", "rBeta2009"] }, "CNVPanelizer": { "name": "CNVPanelizer", "version": "1.36.0", "sha256": "0gpi1psr14b572xn4qx92lfxwy6d7jdkarf67w7f3glvif93vm9k", - "depends": ["BiocGenerics", "foreach", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gplots", "IRanges", "NOISeq", "openxlsx", "plyr", "reshape2", "Rsamtools", "S4Vectors", "shiny", "shinyFiles", "shinyjs", "stringr", "testthat"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "NOISeq", "Rsamtools", "S4Vectors", "foreach", "ggplot2", "gplots", "openxlsx", "plyr", "reshape2", "shiny", "shinyFiles", "shinyjs", "stringr", "testthat"] }, "CNVRanger": { "name": "CNVRanger", "version": "1.20.0", "sha256": "1lwav9nv9rm7zyqxl9sx46vp4016i2175hvys3skj8myyjgcdd7n", - "depends": ["BiocGenerics", "BiocParallel", "data_table", "edgeR", "GDSArray", "gdsfmt", "GenomeInfoDb", "GenomicRanges", "IRanges", "lattice", "limma", "plyr", "qqman", "RaggedExperiment", "rappdirs", "reshape2", "S4Vectors", "SNPRelate", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "GDSArray", "GenomeInfoDb", "GenomicRanges", "IRanges", "RaggedExperiment", "S4Vectors", "SNPRelate", "SummarizedExperiment", "data_table", "edgeR", "gdsfmt", "lattice", "limma", "plyr", "qqman", "rappdirs", "reshape2"] }, "CNVfilteR": { "name": "CNVfilteR", "version": "1.18.0", "sha256": "1jqpdqcnyxww2h5x784yl3i07i3x5kf0xyqgv558rzs936gzc23a", - "depends": ["assertthat", "Biostrings", "CopyNumberPlots", "GenomeInfoDb", "GenomicRanges", "IRanges", "karyoploteR", "pracma", "regioneR", "Rsamtools", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["Biostrings", "CopyNumberPlots", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "SummarizedExperiment", "VariantAnnotation", "assertthat", "karyoploteR", "pracma", "regioneR"] }, "CNViz": { "name": "CNViz", "version": "1.12.0", "sha256": "1s7j8lrl999b7v76z91y56m8nyy3lwjmqlnd1qpxg23jdlgb6bhv", - "depends": ["CopyNumberPlots", "dplyr", "DT", "GenomicRanges", "karyoploteR", "magrittr", "plotly", "scales", "shiny"] + "depends": ["CopyNumberPlots", "DT", "GenomicRanges", "dplyr", "karyoploteR", "magrittr", "plotly", "scales", "shiny"] }, "CNVrd2": { "name": "CNVrd2", "version": "1.42.0", "sha256": "1kbs82a7pri8xv3ci9xdi47ml7r70wjxi0jnsxhrzbaqjss5b4v6", - "depends": ["DNAcopy", "ggplot2", "gridExtra", "IRanges", "rjags", "Rsamtools", "VariantAnnotation"] + "depends": ["DNAcopy", "IRanges", "Rsamtools", "VariantAnnotation", "ggplot2", "gridExtra", "rjags"] }, "COCOA": { "name": "COCOA", "version": "2.18.0", "sha256": "0achirgsp2psybk140wiiagjr9qsapkhdmy4mnf5zg4hc8nx3yn3", - "depends": ["Biobase", "BiocGenerics", "ComplexHeatmap", "data_table", "fitdistrplus", "GenomicRanges", "ggplot2", "IRanges", "MIRA", "S4Vectors", "simpleCache", "tidyr"] + "depends": ["Biobase", "BiocGenerics", "ComplexHeatmap", "GenomicRanges", "IRanges", "MIRA", "S4Vectors", "data_table", "fitdistrplus", "ggplot2", "simpleCache", "tidyr"] }, "CODEX": { "name": "CODEX", "version": "1.36.0", "sha256": "0p3d7hqi14qclz4d7fhp3x4z2dnkwpzpzlgrwacj4njkw94cwdaz", - "depends": ["Biostrings", "BSgenome_Hsapiens_UCSC_hg19", "GenomeInfoDb", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "Biostrings", "GenomeInfoDb", "IRanges", "Rsamtools", "S4Vectors"] }, "COMPASS": { "name": "COMPASS", "version": "1.42.0", "sha256": "0xh3ysmcz4bjqcyqdv9wrmfgblj3k7g7i6wiw2m1vmx5gf98rfpa", - "depends": ["abind", "BiocStyle", "clue", "coda", "data_table", "dplyr", "foreach", "knitr", "magrittr", "pdist", "plyr", "RColorBrewer", "Rcpp", "reshape2", "rlang", "rmarkdown", "scales", "tidyr"] + "depends": ["BiocStyle", "RColorBrewer", "Rcpp", "abind", "clue", "coda", "data_table", "dplyr", "foreach", "knitr", "magrittr", "pdist", "plyr", "reshape2", "rlang", "rmarkdown", "scales", "tidyr"] }, "CONFESS": { "name": "CONFESS", "version": "1.32.0", "sha256": "14m7nz6ls58g4c45x5m7r30ms3kgxslg22jikjsi1cx49ycyk9dl", - "depends": ["changepoint", "cluster", "contrast", "data_table", "EBImage", "ecp", "flexmix", "flowClust", "flowCore", "flowMeans", "flowMerge", "flowPeaks", "foreach", "ggplot2", "limma", "MASS", "moments", "outliers", "plotrix", "raster", "readbitmap", "reshape2", "SamSPECTRAL", "waveslim", "wavethresh", "zoo"] + "depends": ["EBImage", "MASS", "SamSPECTRAL", "changepoint", "cluster", "contrast", "data_table", "ecp", "flexmix", "flowClust", "flowCore", "flowMeans", "flowMerge", "flowPeaks", "foreach", "ggplot2", "limma", "moments", "outliers", "plotrix", "raster", "readbitmap", "reshape2", "waveslim", "wavethresh", "zoo"] }, "CONSTANd": { "name": "CONSTANd", @@ -1037,27 +1043,27 @@ }, "COTAN": { "name": "COTAN", - "version": "2.4.3", - "sha256": "13yw1mrx38im9g87is0ska6piw0ibzfmkk1h46alj1hxc0n3n5gh", - "depends": ["assertthat", "BiocSingular", "circlize", "ComplexHeatmap", "dendextend", "dplyr", "ggplot2", "ggrepel", "ggthemes", "Matrix", "parallelDist", "parallelly", "PCAtools", "plyr", "RColorBrewer", "Rfast", "rlang", "scales", "Seurat", "stringr", "tibble", "tidyr", "umap", "withr", "zeallot"] + "version": "2.4.4", + "sha256": "1b4g6wkk90kjrv8dz4larg3b7pyyid3z7336niwjp7x0ms6hp3zw", + "depends": ["BiocSingular", "ComplexHeatmap", "Matrix", "PCAtools", "RColorBrewer", "Rfast", "Seurat", "assertthat", "circlize", "dendextend", "dplyr", "ggplot2", "ggrepel", "ggthemes", "parallelDist", "parallelly", "plyr", "rlang", "scales", "stringr", "tibble", "tidyr", "umap", "withr", "zeallot"] }, "CRISPRball": { "name": "CRISPRball", "version": "1.0.0", "sha256": "1gxwmasr37azvc7h98izv0npxq5n7hvk1bvl2rgj5fv6da2ddmki", - "depends": ["circlize", "colourpicker", "ComplexHeatmap", "dittoSeq", "DT", "ggplot2", "htmlwidgets", "InteractiveComplexHeatmap", "MAGeCKFlute", "matrixStats", "PCAtools", "plotly", "shiny", "shinyBS", "shinycssloaders", "shinyjqui", "shinyjs", "shinyWidgets"] + "depends": ["ComplexHeatmap", "DT", "InteractiveComplexHeatmap", "MAGeCKFlute", "PCAtools", "circlize", "colourpicker", "dittoSeq", "ggplot2", "htmlwidgets", "matrixStats", "plotly", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "shinyjqui", "shinyjs"] }, "CRISPRseek": { "name": "CRISPRseek", "version": "1.44.0", "sha256": "1vmqwpbl1gplrr45bqs90np0cmrkqshw660k4sxmj9s9k0xdms7c", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "data_table", "DelayedArray", "dplyr", "GenomeInfoDb", "GenomicRanges", "hash", "IRanges", "keras", "mltools", "reticulate", "rhdf5", "S4Vectors", "seqinr", "XVector"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "XVector", "data_table", "dplyr", "hash", "keras", "mltools", "reticulate", "rhdf5", "seqinr"] }, "CRImage": { "name": "CRImage", "version": "1.52.0", "sha256": "0nnyzgdn25s2m9x4xglp12z2b4fai5sbfnx935qadk0b9gb62bdg", - "depends": ["aCGH", "DNAcopy", "e1071", "EBImage", "foreach", "MASS", "sgeostat"] + "depends": ["DNAcopy", "EBImage", "MASS", "aCGH", "e1071", "foreach", "sgeostat"] }, "CSAR": { "name": "CSAR", @@ -1069,19 +1075,19 @@ "name": "CSSQ", "version": "1.16.0", "sha256": "1jwrp0b6qkkc538j1vshqgkazajs9q3fq3dda3cl9a8cbma9jpfg", - "depends": ["GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "ggplot2", "rtracklayer"] }, "CTDquerier": { "name": "CTDquerier", "version": "2.12.0", "sha256": "11z3gy6gn735dydjissdc09kllfd9qvg0gsf5v7a700fz6d78j2a", - "depends": ["BiocFileCache", "ggplot2", "gridExtra", "igraph", "RCurl", "S4Vectors", "stringdist", "stringr"] + "depends": ["BiocFileCache", "RCurl", "S4Vectors", "ggplot2", "gridExtra", "igraph", "stringdist", "stringr"] }, "CTSV": { "name": "CTSV", "version": "1.6.0", "sha256": "1m7a0dqkpiwf234xags4fpg7s41bdhmsdd2ma375w49624wbwkyz", - "depends": ["BiocParallel", "knitr", "pscl", "qvalue", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "SpatialExperiment", "SummarizedExperiment", "knitr", "pscl", "qvalue"] }, "CTdata": { "name": "CTdata", @@ -1093,37 +1099,37 @@ "name": "CTexploreR", "version": "1.0.0", "sha256": "0ld0hzd7vynwvks0bjggc3kfgdzb0jlsjxn1ggk68f2gxrqxv8i8", - "depends": ["BiocGenerics", "circlize", "ComplexHeatmap", "CTdata", "dplyr", "GenomicRanges", "ggplot2", "ggrepel", "IRanges", "MatrixGenerics", "rlang", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["BiocGenerics", "CTdata", "ComplexHeatmap", "GenomicRanges", "IRanges", "MatrixGenerics", "SingleCellExperiment", "SummarizedExperiment", "circlize", "dplyr", "ggplot2", "ggrepel", "rlang", "tibble", "tidyr"] }, "CaDrA": { "name": "CaDrA", "version": "1.2.0", "sha256": "1m7ggdji6j64b6mz6ak2y8f8xyyi8l1gig5b13ksz7j6fgcbyx71", - "depends": ["doParallel", "ggplot2", "gplots", "gtable", "MASS", "misc3d", "plyr", "ppcor", "R_cache", "reshape2", "SummarizedExperiment"] + "depends": ["MASS", "R_cache", "SummarizedExperiment", "doParallel", "ggplot2", "gplots", "gtable", "misc3d", "plyr", "ppcor", "reshape2"] }, "CaMutQC": { "name": "CaMutQC", "version": "1.0.0", "sha256": "1rri2730mpmz0nqb26kqfq950sgw0x97j8xk9vw09m7g89973zzs", - "depends": ["clusterProfiler", "data_table", "dplyr", "DT", "ggplot2", "maftools", "MesKit", "org_Hs_eg_db", "stringr", "tidyr", "vcfR"] + "depends": ["DT", "MesKit", "clusterProfiler", "data_table", "dplyr", "ggplot2", "maftools", "org_Hs_eg_db", "stringr", "tidyr", "vcfR"] }, "Cardinal": { "name": "Cardinal", - "version": "3.6.2", - "sha256": "038dlgr4p1x42hb5xrz8apvdi4d18si2vr3r8g3i4aiyvpc2rfwj", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "CardinalIO", "EBImage", "irlba", "Matrix", "matter", "nlme", "ProtGenerics", "S4Vectors"] + "version": "3.6.5", + "sha256": "08ka7llgnjprfxnwj6fdydsr6azxj66mgkyjx0g9hbdcqn5ph6av", + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "CardinalIO", "EBImage", "Matrix", "ProtGenerics", "S4Vectors", "irlba", "matter", "nlme"] }, "CardinalIO": { "name": "CardinalIO", "version": "1.2.1", "sha256": "1kzqz2zba8i5z1pkwwi0hzb6fm7xh22bymkk1jwicyrk94fzfw1l", - "depends": ["matter", "ontologyIndex", "S4Vectors"] + "depends": ["S4Vectors", "matter", "ontologyIndex"] }, "Category": { "name": "Category", "version": "2.70.0", "sha256": "0paz6h8rsbqvlxxj4di8cl76aybgjr842z5gdv8xi6c2d7zwbclw", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "genefilter", "graph", "GSEABase", "Matrix", "RBGL"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "GSEABase", "Matrix", "RBGL", "annotate", "genefilter", "graph"] }, "CausalR": { "name": "CausalR", @@ -1135,19 +1141,19 @@ "name": "CeTF", "version": "1.16.0", "sha256": "0vpy0ns19wnq9pqhkc1dlx2b0y9rjxznq61z242p53gvh05zmzxi", - "depends": ["circlize", "clusterProfiler", "ComplexHeatmap", "DESeq2", "dplyr", "GenomicTools_fileHandler", "GGally", "ggnetwork", "ggplot2", "ggpubr", "ggrepel", "igraph", "Matrix", "network", "Rcpp", "RcppArmadillo", "RCy3", "S4Vectors", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "DESeq2", "GGally", "GenomicTools_fileHandler", "Matrix", "RCy3", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "circlize", "clusterProfiler", "dplyr", "ggnetwork", "ggplot2", "ggpubr", "ggrepel", "igraph", "network"] }, "CellBarcode": { "name": "CellBarcode", "version": "1.10.0", "sha256": "006mlhzw5pwdr335q27f05jwwwra8fs563qph7ghlr8s7ws55q9g", - "depends": ["BH", "Biostrings", "Ckmeans_1d_dp", "data_table", "egg", "ggplot2", "magrittr", "plyr", "Rcpp", "Rsamtools", "S4Vectors", "seqinr", "ShortRead", "stringr", "zlibbioc"] + "depends": ["BH", "Biostrings", "Ckmeans_1d_dp", "Rcpp", "Rsamtools", "S4Vectors", "ShortRead", "data_table", "egg", "ggplot2", "magrittr", "plyr", "seqinr", "stringr", "zlibbioc"] }, "CellBench": { "name": "CellBench", "version": "1.20.0", "sha256": "0azswhd2r9yf2qlz31105kk911iaxfxd2b4drvdq2f57asqw6mwm", - "depends": ["assertthat", "BiocFileCache", "BiocGenerics", "BiocParallel", "dplyr", "glue", "lubridate", "magrittr", "memoise", "purrr", "rappdirs", "rlang", "SingleCellExperiment", "tibble", "tidyr", "tidyselect"] + "depends": ["BiocFileCache", "BiocGenerics", "BiocParallel", "SingleCellExperiment", "assertthat", "dplyr", "glue", "lubridate", "magrittr", "memoise", "purrr", "rappdirs", "rlang", "tibble", "tidyr", "tidyselect"] }, "CellMapper": { "name": "CellMapper", @@ -1159,91 +1165,97 @@ "name": "CellMixS", "version": "1.20.0", "sha256": "16l2kw8rbnhn4qyz6sg1pnjfc6cjc12lsx5qzyysnpbpmgm7yqrv", - "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "cowplot", "dplyr", "ggplot2", "ggridges", "kSamples", "magrittr", "purrr", "scater", "SingleCellExperiment", "SummarizedExperiment", "tidyr", "viridis"] + "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "SingleCellExperiment", "SummarizedExperiment", "cowplot", "dplyr", "ggplot2", "ggridges", "kSamples", "magrittr", "purrr", "scater", "tidyr", "viridis"] }, "CellNOptR": { "name": "CellNOptR", "version": "1.50.0", "sha256": "0b6q0xrhyqnpzwkwsdywv008axhikmagpx11z85vik1mml12nhs7", - "depends": ["ggplot2", "graph", "igraph", "RBGL", "RCurl", "Rgraphviz", "rmarkdown", "stringi", "stringr", "XML"] + "depends": ["RBGL", "RCurl", "Rgraphviz", "XML", "ggplot2", "graph", "igraph", "rmarkdown", "stringi", "stringr"] }, "CellScore": { "name": "CellScore", "version": "1.24.0", "sha256": "17aspmnfs4asixn6cc12k0q4an70642cgx0wy650aqhhkqjlyq88", - "depends": ["Biobase", "gplots", "lsa", "RColorBrewer", "squash", "SummarizedExperiment"] + "depends": ["Biobase", "RColorBrewer", "SummarizedExperiment", "gplots", "lsa", "squash"] }, "CellTrails": { "name": "CellTrails", "version": "1.22.0", "sha256": "0pqazyf5da9zw95gpmhlj9mbhvv78c0rl6cncy3pij293xcy02l4", - "depends": ["Biobase", "BiocGenerics", "cba", "dendextend", "dtw", "EnvStats", "ggplot2", "ggrepel", "igraph", "maptree", "mgcv", "reshape2", "Rtsne", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "EnvStats", "Rtsne", "SingleCellExperiment", "SummarizedExperiment", "cba", "dendextend", "dtw", "ggplot2", "ggrepel", "igraph", "maptree", "mgcv", "reshape2"] }, "CelliD": { "name": "CelliD", "version": "1.12.0", "sha256": "0c7hls5qasjd5ahrqxp2mpd402jc12pi0pgy7spcbp1fkqm8qvbl", - "depends": ["BiocParallel", "data_table", "fastmatch", "fgsea", "ggplot2", "glue", "irlba", "Matrix", "matrixStats", "pbapply", "Rcpp", "RcppArmadillo", "reticulate", "Rtsne", "scater", "Seurat", "SingleCellExperiment", "stringr", "SummarizedExperiment", "tictoc", "umap"] + "depends": ["BiocParallel", "Matrix", "Rcpp", "RcppArmadillo", "Rtsne", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "data_table", "fastmatch", "fgsea", "ggplot2", "glue", "irlba", "matrixStats", "pbapply", "reticulate", "scater", "stringr", "tictoc", "umap"] + }, + "Cepo": { + "name": "Cepo", + "version": "1.10.2", + "sha256": "1vqfb797q3pd69ana2m7vbd89jzqkbhc3xhfzskj5cxrggd4d2cv", + "depends": ["BiocParallel", "DelayedArray", "DelayedMatrixStats", "GSEABase", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "patchwork", "purrr", "reshape2", "rlang"] }, "CexoR": { "name": "CexoR", "version": "1.42.0", "sha256": "09376wzlknf8nlq81rrbbfsbbgd4mi5aagry51nykw5vc0870vdn", - 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"depends": ["BiocGenerics", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Mmusculus_UCSC_mm9", "GenomeInfoDb", "GenomicRanges", "IRanges", "limma", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Mmusculus_UCSC_mm9", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "limma", "rtracklayer"] }, "ChIPQC": { "name": "ChIPQC", "version": "1.40.0", "sha256": "0lnk5lchwjnrr03x2r6lwgrja42n0rhfp5w9sya2y69da47bcks4", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "chipseq", "DiffBind", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "gtools", "IRanges", "Nozzle_R1", "reshape2", "Rsamtools", "S4Vectors", "TxDb_Celegans_UCSC_ce6_ensGene", "TxDb_Dmelanogaster_UCSC_dm3_ensGene", "TxDb_Hsapiens_UCSC_hg18_knownGene", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "TxDb_Mmusculus_UCSC_mm9_knownGene", "TxDb_Rnorvegicus_UCSC_rn4_ensGene"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DiffBind", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Nozzle_R1", "Rsamtools", "S4Vectors", "TxDb_Celegans_UCSC_ce6_ensGene", "TxDb_Dmelanogaster_UCSC_dm3_ensGene", "TxDb_Hsapiens_UCSC_hg18_knownGene", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "TxDb_Mmusculus_UCSC_mm9_knownGene", "TxDb_Rnorvegicus_UCSC_rn4_ensGene", "chipseq", "ggplot2", "gtools", "reshape2"] }, "ChIPXpress": { "name": "ChIPXpress", "version": "1.48.0", "sha256": "09lkm6s98ip9pw9cwdx8a0z816krr4cgzrcrd7b3d4v4bcywsy7z", - "depends": ["affy", "biganalytics", "bigmemory", "Biobase", "ChIPXpressData", "frma", "GEOquery"] + "depends": ["Biobase", "ChIPXpressData", "GEOquery", "affy", "biganalytics", "bigmemory", "frma"] }, "ChIPanalyser": { "name": "ChIPanalyser", "version": "1.26.0", "sha256": "0jxsy6xd4cr3w5zjjxkziiqpzhg8fld0fh4c3rr34823646ly9ja", - "depends": ["BiocManager", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "RcppRoll", "ROCR", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "BiocManager", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "ROCR", "RcppRoll", "S4Vectors", "rtracklayer"] }, "ChIPexoQual": { "name": "ChIPexoQual", "version": "1.28.0", "sha256": "0y39fpbnykqf5ycpi9q3rw73dkn2ksll7n6nafimxvxsh463d8ky", - "depends": ["BiocParallel", "biovizBase", "broom", "data_table", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "hexbin", "IRanges", "RColorBrewer", "rmarkdown", "Rsamtools", "S4Vectors", "scales", "viridis"] + "depends": ["BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "biovizBase", "broom", "data_table", "dplyr", "ggplot2", "hexbin", "rmarkdown", "scales", "viridis"] }, "ChIPpeakAnno": { "name": "ChIPpeakAnno", - "version": "3.38.0", - "sha256": "1g7p53g91xx3x10kad2f190bmg10ryp928m0q5wxz9n8lycb5rgl", - "depends": ["AnnotationDbi", "BiocGenerics", "biomaRt", "Biostrings", "data_table", "DBI", "dplyr", "ensembldb", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "graph", "InteractionSet", "IRanges", "KEGGREST", "matrixStats", "multtest", "pwalign", "RBGL", "regioneR", "Rsamtools", "rtracklayer", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble", "tidyr", "universalmotif", "VennDiagram"] + "version": "3.38.1", + "sha256": "11mswd6y4c8l0adrpc4z8hh96dcx59bf70zy572r5lfsj8rz0rgk", + "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "InteractionSet", "KEGGREST", "RBGL", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VennDiagram", "biomaRt", "data_table", "dplyr", "ensembldb", "ggplot2", "graph", "matrixStats", "multtest", "pwalign", "regioneR", "rtracklayer", "scales", "stringr", "tibble", "tidyr", "universalmotif"] }, "ChIPseeker": { "name": "ChIPseeker", "version": "1.40.0", "sha256": "00iknjk7vgj48vj1pp7l98g7nvc3x495z3jcq5nbvdiff02faj1f", - "depends": ["AnnotationDbi", "aplot", "BiocGenerics", "boot", "dplyr", "enrichplot", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "gplots", "gtools", "IRanges", "magrittr", "plotrix", "rtracklayer", "S4Vectors", "tibble", "TxDb_Hsapiens_UCSC_hg19_knownGene", "yulab_utils"] + "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "aplot", "boot", "dplyr", "enrichplot", "ggplot2", "gplots", "gtools", "magrittr", "plotrix", "rtracklayer", "tibble", "yulab_utils"] }, "ChIPseqR": { "name": "ChIPseqR", "version": "1.58.0", "sha256": "1lgwy6qprrvx1yv04vx567kr5b6mwz46kwafsqldwgqr2by45kgm", - "depends": ["BiocGenerics", "Biostrings", "fBasics", "GenomicRanges", "HilbertVis", "IRanges", "S4Vectors", "ShortRead", "timsac"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "HilbertVis", "IRanges", "S4Vectors", "ShortRead", "fBasics", "timsac"] }, "ChIPsim": { "name": "ChIPsim", @@ -1261,43 +1273,43 @@ "name": "ChemmineR", "version": "3.56.0", "sha256": "1252xy33bgjrd4gh4shrgzklgxry2lf67svzxjra5yckf8am0rdc", - "depends": ["base64enc", "BH", "BiocGenerics", "DBI", "digest", "DT", "ggplot2", "gridExtra", "jsonlite", "png", "Rcpp", "RCurl", "rjson", "rsvg", "stringi"] + "depends": ["BH", "BiocGenerics", "DBI", "DT", "RCurl", "Rcpp", "base64enc", "digest", "ggplot2", "gridExtra", "jsonlite", "png", "rjson", "rsvg", "stringi"] }, "Chicago": { "name": "Chicago", "version": "1.32.0", "sha256": "05djywxsyfxb26d0clx51q7wmsw3rq56va444d6iy5n7xlhj9m94", - "depends": ["data_table", "Delaporte", "Hmisc", "MASS", "matrixStats"] + "depends": ["Delaporte", "Hmisc", "MASS", "data_table", "matrixStats"] }, "ChromHeatMap": { "name": "ChromHeatMap", "version": "1.58.0", "sha256": "1kzrx26rj7wfki6l5g1426p30fch6b92x0y06rg17i3psbmmkmqg", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "rtracklayer"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "annotate", "rtracklayer"] }, "ChromSCape": { "name": "ChromSCape", "version": "1.14.0", "sha256": "12chaigwnqm765p0qlf00s94kkg3dphj2cbqv3vfsyya54hbhfzr", - "depends": ["batchelor", "BiocParallel", "colorRamps", "colourpicker", "ConsensusClusterPlus", "coop", "DelayedArray", "dplyr", "DT", "edgeR", "forcats", "fs", "GenomicRanges", "gggenes", "ggplot2", "ggrepel", "gridExtra", "IRanges", "irlba", "jsonlite", "kableExtra", "Matrix", "matrixTests", "msigdbr", "plotly", "qs", "qualV", "Rcpp", "rlist", "Rsamtools", "rtracklayer", "Rtsne", "S4Vectors", "scater", "scran", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyFiles", "shinyhelper", "shinyjs", "shinyWidgets", "SingleCellExperiment", "stringdist", "stringr", "SummarizedExperiment", "tibble", "tidyr", "umap", "viridis"] + "depends": ["BiocParallel", "ConsensusClusterPlus", "DT", "DelayedArray", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "Rsamtools", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "batchelor", "colorRamps", "colourpicker", "coop", "dplyr", "edgeR", "forcats", "fs", "gggenes", "ggplot2", "ggrepel", "gridExtra", "irlba", "jsonlite", "kableExtra", "matrixTests", "msigdbr", "plotly", "qs", "qualV", "rlist", "rtracklayer", "scater", "scran", "shiny", "shinyFiles", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyhelper", "shinyjs", "stringdist", "stringr", "tibble", "tidyr", "umap", "viridis"] }, "CircSeqAlignTk": { "name": "CircSeqAlignTk", "version": "1.6.0", "sha256": "1i9izbf9mzlc7sl2zi5gj4dhxa6mq9kkyysxdq9cj4myhrp9hgwz", - "depends": ["BiocGenerics", "Biostrings", "dplyr", "ggplot2", "htmltools", "IRanges", "magrittr", "plotly", "R_utils", "Rbowtie2", "Rhisat2", "rlang", "Rsamtools", "S4Vectors", "shiny", "shinyFiles", "shinyjs", "ShortRead", "tidyr"] + "depends": ["BiocGenerics", "Biostrings", "IRanges", "R_utils", "Rbowtie2", "Rhisat2", "Rsamtools", "S4Vectors", "ShortRead", "dplyr", "ggplot2", "htmltools", "magrittr", "plotly", "rlang", "shiny", "shinyFiles", "shinyjs", "tidyr"] }, "CiteFuse": { "name": "CiteFuse", "version": "1.16.0", "sha256": "1vxynidr7p0khq54d08vzzh2ijaxx1ghm7pxnpg7zppfxvlmsh35", - "depends": ["compositions", "cowplot", "dbscan", "ggplot2", "ggraph", "ggridges", "gridExtra", "igraph", "Matrix", "mixtools", "pheatmap", "randomForest", "Rcpp", "reshape2", "rhdf5", "rlang", "Rtsne", "S4Vectors", "scales", "scran", "SingleCellExperiment", "SummarizedExperiment", "uwot"] + "depends": ["Matrix", "Rcpp", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "compositions", "cowplot", "dbscan", "ggplot2", "ggraph", "ggridges", "gridExtra", "igraph", "mixtools", "pheatmap", "randomForest", "reshape2", "rhdf5", "rlang", "scales", "scran", "uwot"] }, "ClassifyR": { "name": "ClassifyR", - "version": "3.8.2", - "sha256": "1p78lxcannrfif2029pksc1minzf4jp0p4r79b7rz06p3nq54wav", - "depends": ["BiocParallel", "dplyr", "genefilter", "generics", "ggplot2", "ggpubr", "ggupset", "MultiAssayExperiment", "ranger", "reshape2", "rlang", "S4Vectors", "survival", "tidyr"] + "version": "3.8.3", + "sha256": "1p52jn7zq8kyfksrg74vjy43aw20qc02fw1cbhhb8liqq5bhxak0", + "depends": ["BiocParallel", "MultiAssayExperiment", "S4Vectors", "dplyr", "genefilter", "generics", "ggplot2", "ggpubr", "ggupset", "ranger", "reshape2", "rlang", "survival", "tidyr"] }, "Clomial": { "name": "Clomial", @@ -1309,13 +1321,13 @@ "name": "CluMSID", "version": "1.20.0", "sha256": "02y79fhzx2hzwj8sjafywm7zqqar48b1m156ld60jjvskrv8ywqf", - "depends": ["ape", "Biobase", "dbscan", "GGally", "ggplot2", "gplots", "MSnbase", "mzR", "network", "plotly", "RColorBrewer", "S4Vectors", "sna"] + "depends": ["Biobase", "GGally", "MSnbase", "RColorBrewer", "S4Vectors", "ape", "dbscan", "ggplot2", "gplots", "mzR", "network", "plotly", "sna"] }, "ClustAll": { "name": "ClustAll", "version": "1.0.0", "sha256": "13qg0r6lqvzyggkf8gjyxh8d871f483fcrhgbhr4xwpfpwssv8k8", - "depends": ["bigstatsr", "circlize", "cluster", "clValid", "ComplexHeatmap", "doSNOW", "dplyr", "FactoMineR", "flock", "foreach", "fpc", "ggplot2", "mice", "modeest", "networkD3", "pbapply", "RColorBrewer"] + "depends": ["ComplexHeatmap", "FactoMineR", "RColorBrewer", "bigstatsr", "circlize", "clValid", "cluster", "doSNOW", "dplyr", "flock", "foreach", "fpc", "ggplot2", "mice", "modeest", "networkD3", "pbapply"] }, "ClustIRR": { "name": "ClustIRR", @@ -1327,7 +1339,7 @@ "name": "ClusterFoldSimilarity", "version": "1.0.0", "sha256": "136bh473b8fznxlrszvxr4w0q6y2cxhhm0xd43fka5wq130x3nr9", - "depends": ["BiocParallel", "cowplot", "dplyr", "ggdendro", "ggplot2", "igraph", "Matrix", "reshape2", "scales", "Seurat", "SeuratObject", "SingleCellExperiment"] + "depends": ["BiocParallel", "Matrix", "Seurat", "SeuratObject", "SingleCellExperiment", "cowplot", "dplyr", "ggdendro", "ggplot2", "igraph", "reshape2", "scales"] }, "ClusterJudge": { "name": "ClusterJudge", @@ -1339,7 +1351,7 @@ "name": "ClusterSignificance", "version": "1.32.0", "sha256": "0n12085247f51n8sp7fic7il73h9k25fkc8sj7wr7nmi81j497ah", - "depends": ["pracma", "princurve", "RColorBrewer", "scatterplot3d"] + "depends": ["RColorBrewer", "pracma", "princurve", "scatterplot3d"] }, "CoCiteStats": { "name": "CoCiteStats", @@ -1351,31 +1363,31 @@ "name": "CoGAPS", "version": "3.24.0", "sha256": "1yq625qb5hb0j5jf0r6sxyhwm1zlycv4dkfr3kv2hkapfshirk2b", - "depends": ["BH", "BiocParallel", "cluster", "dplyr", "fgsea", "forcats", "ggplot2", "gplots", "RColorBrewer", "Rcpp", "rhdf5", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BH", "BiocParallel", "RColorBrewer", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cluster", "dplyr", "fgsea", "forcats", "ggplot2", "gplots", "rhdf5"] }, "Cogito": { "name": "Cogito", "version": "1.10.0", "sha256": "1xin0jxc38qzdh6jfq4pkydsxbyf36pl5b4vipgw145nvll537vr", - "depends": ["AnnotationDbi", "BiocManager", "entropy", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "jsonlite", "magrittr", "rmarkdown", "S4Vectors", "TxDb_Mmusculus_UCSC_mm9_knownGene"] + "depends": ["AnnotationDbi", "BiocManager", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "S4Vectors", "TxDb_Mmusculus_UCSC_mm9_knownGene", "entropy", "ggplot2", "jsonlite", "magrittr", "rmarkdown"] }, "ComPrAn": { "name": "ComPrAn", "version": "1.12.0", "sha256": "0nj1h3chqc1pspaj2r5ccxswdfz8zmwaqa1v3nmav54z5l5s70iv", - "depends": ["data_table", "dplyr", "DT", "forcats", "ggplot2", "magrittr", "purrr", "RColorBrewer", "rio", "rlang", "scales", "shiny", "shinydashboard", "shinyjs", "stringr", "tibble", "tidyr", "VennDiagram"] + "depends": ["DT", "RColorBrewer", "VennDiagram", "data_table", "dplyr", "forcats", "ggplot2", "magrittr", "purrr", "rio", "rlang", "scales", "shiny", "shinydashboard", "shinyjs", "stringr", "tibble", "tidyr"] }, "ComplexHeatmap": { "name": "ComplexHeatmap", "version": "2.20.0", "sha256": "1ppzx850nvvdhz2xiggr43c79w0nr0vmsmmnszasd4flf3jm7v8v", - "depends": ["circlize", "clue", "codetools", "colorspace", "digest", "doParallel", "foreach", "GetoptLong", "GlobalOptions", "IRanges", "matrixStats", "png", "RColorBrewer"] + "depends": ["GetoptLong", "GlobalOptions", "IRanges", "RColorBrewer", "circlize", "clue", "codetools", "colorspace", "digest", "doParallel", "foreach", "matrixStats", "png"] }, "CompoundDb": { "name": "CompoundDb", "version": "1.8.0", "sha256": "10rg8419ng2zmgn7ydlywxsfqdz8m15rs5wmsicfngagd2nwp5mf", - "depends": ["AnnotationFilter", "Biobase", "BiocGenerics", "BiocParallel", "ChemmineR", "DBI", "dbplyr", "dplyr", "IRanges", "jsonlite", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "RSQLite", "S4Vectors", "Spectra", "tibble", "xml2"] + "depends": ["AnnotationFilter", "Biobase", "BiocGenerics", "BiocParallel", "ChemmineR", "DBI", "IRanges", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "RSQLite", "S4Vectors", "Spectra", "dbplyr", "dplyr", "jsonlite", "tibble", "xml2"] }, "ConsensusClusterPlus": { "name": "ConsensusClusterPlus", @@ -1387,13 +1399,13 @@ "name": "CopyNumberPlots", "version": "1.20.0", "sha256": "1b3yschvrwsaj5szrnwbwrxswfxvalfs495q26g1r7w6l26qjv5b", - "depends": ["cn_mops", "GenomeInfoDb", "GenomicRanges", "IRanges", "karyoploteR", "regioneR", "rhdf5", "Rsamtools", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "SummarizedExperiment", "VariantAnnotation", "cn_mops", "karyoploteR", "regioneR", "rhdf5"] }, "CoreGx": { "name": "CoreGx", "version": "2.8.0", "sha256": "05fyncpqiq08a169rjwyc117wkyckh714z0is2r0g79920i36jas", - "depends": ["bench", "Biobase", "BiocGenerics", "BiocParallel", "BumpyMatrix", "checkmate", "crayon", "data_table", "glue", "lsa", "MatrixGenerics", "MultiAssayExperiment", "piano", "rlang", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "BumpyMatrix", "MatrixGenerics", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "bench", "checkmate", "crayon", "data_table", "glue", "lsa", "piano", "rlang"] }, "Cormotif": { "name": "Cormotif", @@ -1405,25 +1417,25 @@ "name": "CoverageView", "version": "1.42.0", "sha256": "1wgkn2adcxl6js3cvawhvzpxm3nmnnc16wbnzkrnsnd9l12aasih", - "depends": ["GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "rtracklayer"] }, "CrispRVariants": { "name": "CrispRVariants", "version": "1.32.0", "sha256": "1nlmznpypfabzrn430hs4k3b8zbw6n1brfy1x2j00bnq3sdd7zgc", - "depends": ["AnnotationDbi", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "reshape2", "Rsamtools", "S4Vectors"] + "depends": ["AnnotationDbi", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ggplot2", "gridExtra", "reshape2"] }, "CuratedAtlasQueryR": { "name": "CuratedAtlasQueryR", "version": "1.2.0", "sha256": "0b0p4q4nsn1bxxyz61gh9r9bqkwkmjybqrv1ij565kbjnwimbcxj", - "depends": ["assertthat", "BiocGenerics", "cli", "DBI", "dbplyr", "dplyr", "duckdb", "glue", "HDF5Array", "httr", "purrr", "rlang", "S4Vectors", "Seurat", "SeuratObject", "SingleCellExperiment", "stringr", "SummarizedExperiment", "tibble"] + "depends": ["BiocGenerics", "DBI", "HDF5Array", "S4Vectors", "Seurat", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "assertthat", "cli", "dbplyr", "dplyr", "duckdb", "glue", "httr", "purrr", "rlang", "stringr", "tibble"] }, "CyTOFpower": { "name": "CyTOFpower", "version": "1.10.0", "sha256": "158ixl91yfhzik2d22xijarllirbxg33783i5pxixcdz3amp1z56", - "depends": ["CytoGLMM", "diffcyt", "dplyr", "DT", "ggplot2", "magrittr", "rlang", "shiny", "shinyFeedback", "shinyjs", "shinyMatrix", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["CytoGLMM", "DT", "SummarizedExperiment", "diffcyt", "dplyr", "ggplot2", "magrittr", "rlang", "shiny", "shinyFeedback", "shinyMatrix", "shinyjs", "tibble", "tidyr"] }, "CytoDx": { "name": "CytoDx", @@ -1435,7 +1447,7 @@ "name": "CytoGLMM", "version": "1.12.0", "sha256": "1dfrp97mx93fdx4mrd4p8w2v37hq9h5b829l75vxxpmx2xqv4c7a", - "depends": ["BiocParallel", "caret", "cowplot", "doParallel", "dplyr", "factoextra", "flexmix", "ggplot2", "ggrepel", "logging", "magrittr", "MASS", "Matrix", "mbest", "pheatmap", "RColorBrewer", "rlang", "stringr", "strucchange", "tibble", "tidyr"] + "depends": ["BiocParallel", "MASS", "Matrix", "RColorBrewer", "caret", "cowplot", "doParallel", "dplyr", "factoextra", "flexmix", "ggplot2", "ggrepel", "logging", "magrittr", "mbest", "pheatmap", "rlang", "stringr", "strucchange", "tibble", "tidyr"] }, "CytoMDS": { "name": "CytoMDS", @@ -1447,13 +1459,13 @@ "name": "CytoML", "version": "2.16.0", "sha256": "11kflx3yahl7xjl6x2rgpd4hl5y69qgarzhalmz4qdci7b7ln7kr", - "depends": ["BH", "Biobase", "cpp11", "cytolib", "data_table", "dplyr", "flowCore", "flowWorkspace", "ggcyto", "graph", "jsonlite", "openCyto", "RBGL", "Rgraphviz", "Rhdf5lib", "RProtoBufLib", "tibble", "XML", "yaml"] + "depends": ["BH", "Biobase", "RBGL", "RProtoBufLib", "Rgraphviz", "Rhdf5lib", "XML", "cpp11", "cytolib", "data_table", "dplyr", "flowCore", "flowWorkspace", "ggcyto", "graph", "jsonlite", "openCyto", "tibble", "yaml"] }, "CytoPipeline": { "name": "CytoPipeline", "version": "1.4.0", "sha256": "1c8w2v8990z8kp7wxc69ildhj0v5g3zx05dzyhb16nrlnb7bfcc4", - "depends": ["BiocFileCache", "BiocParallel", "diagram", "flowAI", "flowCore", "ggcyto", "ggplot2", "jsonlite", "PeacoQC", "rlang", "scales", "withr"] + "depends": ["BiocFileCache", "BiocParallel", "PeacoQC", "diagram", "flowAI", "flowCore", "ggcyto", "ggplot2", "jsonlite", "rlang", "scales", "withr"] }, "CytoPipelineGUI": { "name": "CytoPipelineGUI", @@ -1465,13 +1477,13 @@ "name": "DAMEfinder", "version": "1.16.0", "sha256": "1ffqa7a3a0f3m58j6al2hd7aa8bamv4z170y4yn1vr1f8jrb7kq5", - "depends": ["BiocGenerics", "Biostrings", "bumphunter", "cowplot", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "limma", "plyr", "readr", "reshape2", "Rsamtools", "S4Vectors", "stringr", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "bumphunter", "cowplot", "ggplot2", "limma", "plyr", "readr", "reshape2", "stringr"] }, "DAPAR": { "name": "DAPAR", "version": "1.36.2", "sha256": "1800c6g39gg9q43v1s5r13qm4aj53x18qzbbyz75fpwrril967gr", - "depends": ["Biobase", "DAPARdata", "foreach", "highcharter", "MSnbase"] + "depends": ["Biobase", "DAPARdata", "MSnbase", "foreach", "highcharter"] }, "DART": { "name": "DART", @@ -1483,7 +1495,7 @@ "name": "DCATS", "version": "1.2.0", "sha256": "1hf275h40d5ggya58malxbrmzqi5gi04w847gc567qzpzs1bqfp2", - "depends": ["aod", "e1071", "matrixStats", "MCMCpack", "robustbase"] + "depends": ["MCMCpack", "aod", "e1071", "matrixStats", "robustbase"] }, "DECIPHER": { "name": "DECIPHER", @@ -1495,19 +1507,19 @@ "name": "DEFormats", "version": "1.32.0", "sha256": "0sxflb9b148gkylxpfmmk9pmh3gblc4wp6594n0w4a711xrv1jr9", - "depends": ["checkmate", "data_table", "DESeq2", "edgeR", "GenomicRanges", "S4Vectors", "SummarizedExperiment"] + "depends": ["DESeq2", "GenomicRanges", "S4Vectors", "SummarizedExperiment", "checkmate", "data_table", "edgeR"] }, "DEGraph": { "name": "DEGraph", "version": "1.56.0", "sha256": "0pxh6kyi4blz039yw7vzi9dj4jpzsbv0p2fw44fz2q2pzr98g2m9", - "depends": ["graph", "KEGGgraph", "lattice", "mvtnorm", "NCIgraph", "R_methodsS3", "R_utils", "RBGL", "Rgraphviz", "rrcov"] + "depends": ["KEGGgraph", "NCIgraph", "RBGL", "R_methodsS3", "R_utils", "Rgraphviz", "graph", "lattice", "mvtnorm", "rrcov"] }, "DEGreport": { "name": "DEGreport", - "version": "1.40.0", - "sha256": "087c7x3vz8z3yz4jdwbcskdqmv3kgz4c4vi3r9gvvay5z36yhpl5", - "depends": ["Biobase", "BiocGenerics", "broom", "circlize", "cluster", "ComplexHeatmap", "ConsensusClusterPlus", "cowplot", "dendextend", "DESeq2", "dplyr", "edgeR", "ggdendro", "ggplot2", "ggrepel", "knitr", "logging", "magrittr", "psych", "RColorBrewer", "reshape", "rlang", "S4Vectors", "scales", "stringi", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "version": "1.40.1", + "sha256": "0z5wzdixw6pyfd72drh54aalmp9nd5p1xi5vn53d58w78hrb757p", + "depends": ["Biobase", "BiocGenerics", "ComplexHeatmap", "ConsensusClusterPlus", "DESeq2", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "broom", "circlize", "cluster", "cowplot", "dendextend", "dplyr", "edgeR", "ggdendro", "ggplot2", "ggrepel", "knitr", "logging", "magrittr", "psych", "reshape", "rlang", "scales", "stringi", "stringr", "tibble", "tidyr"] }, "DEGseq": { "name": "DEGseq", @@ -1519,43 +1531,43 @@ "name": "DELocal", "version": "1.4.0", "sha256": "0xxlf90h1zi97k5rsbv41l88yq7qgfmd1rrmyipfjzhbl3l2spaf", - "depends": ["DESeq2", "dplyr", "ggplot2", "limma", "matrixStats", "reshape2", "SummarizedExperiment"] + "depends": ["DESeq2", "SummarizedExperiment", "dplyr", "ggplot2", "limma", "matrixStats", "reshape2"] }, "DEP": { "name": "DEP", "version": "1.26.0", "sha256": "1z8ymvghbbr9igcdzqwaz62r8lk07c2b1gnjbk504cxrhyy301jx", - "depends": ["assertthat", "circlize", "cluster", "ComplexHeatmap", "dplyr", "DT", "fdrtool", "ggplot2", "ggrepel", "gridExtra", "imputeLCMD", "limma", "MSnbase", "purrr", "RColorBrewer", "readr", "rmarkdown", "shiny", "shinydashboard", "SummarizedExperiment", "tibble", "tidyr", "vsn"] + "depends": ["ComplexHeatmap", "DT", "MSnbase", "RColorBrewer", "SummarizedExperiment", "assertthat", "circlize", "cluster", "dplyr", "fdrtool", "ggplot2", "ggrepel", "gridExtra", "imputeLCMD", "limma", "purrr", "readr", "rmarkdown", "shiny", "shinydashboard", "tibble", "tidyr", "vsn"] }, "DEScan2": { "name": "DEScan2", "version": "1.24.0", "sha256": "15ncl95mf7mxazic0ig15isnblyj59dcr2xjv05dcwxc11wz1fr0", - "depends": ["BiocGenerics", "BiocParallel", "ChIPpeakAnno", "data_table", "DelayedArray", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "glue", "IRanges", "plyr", "Rcpp", "RcppArmadillo", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "ChIPpeakAnno", "DelayedArray", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "glue", "plyr", "rtracklayer"] }, "DESeq2": { "name": "DESeq2", "version": "1.44.0", "sha256": "1j7ivkxbc75hzxhl9d97w8vamrmxf6527n7841i1j9n6s7hz1cdn", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "GenomicRanges", "ggplot2", "IRanges", "locfit", "MatrixGenerics", "matrixStats", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "GenomicRanges", "IRanges", "MatrixGenerics", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "ggplot2", "locfit", "matrixStats"] }, "DESpace": { "name": "DESpace", "version": "1.4.0", "sha256": "0lx3igbclpxx6jjvsagwjdakg9iy325xhkw7iixj8m6b8s4dkmkp", - "depends": ["assertthat", "BiocGenerics", "BiocParallel", "cowplot", "data_table", "dplyr", "edgeR", "ggforce", "ggnewscale", "ggplot2", "ggpubr", "limma", "Matrix", "patchwork", "S4Vectors", "scales", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "Matrix", "S4Vectors", "SpatialExperiment", "SummarizedExperiment", "assertthat", "cowplot", "data_table", "dplyr", "edgeR", "ggforce", "ggnewscale", "ggplot2", "ggpubr", "limma", "patchwork", "scales"] }, "DEWSeq": { "name": "DEWSeq", "version": "1.18.0", "sha256": "034p1rxc1w758zpy920sgpcfr0dmhkfqrcximqkary0n0m6n95i0", - "depends": ["BiocGenerics", "BiocParallel", "data_table", "DESeq2", "GenomeInfoDb", "GenomicRanges", "R_utils", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "DESeq2", "GenomeInfoDb", "GenomicRanges", "R_utils", "S4Vectors", "SummarizedExperiment", "data_table"] }, "DEXSeq": { "name": "DEXSeq", "version": "1.50.0", "sha256": "13y3fhgvf7438yjv6qm28n8f42w4wgkklc0q229ypns1gfh54524", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "biomaRt", "DESeq2", "genefilter", "geneplotter", "GenomicRanges", "hwriter", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "statmod", "stringr", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "DESeq2", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "biomaRt", "genefilter", "geneplotter", "hwriter", "statmod", "stringr"] }, "DEqMS": { "name": "DEqMS", @@ -1567,19 +1579,19 @@ "name": "DEsingle", "version": "1.24.0", "sha256": "06bnvyivj4bx5l2zvwjj4za2hpshsifsa83lsi9fpgdwhn3526kd", - "depends": ["bbmle", "BiocParallel", "gamlss", "MASS", "Matrix", "maxLik", "pscl", "VGAM"] + "depends": ["BiocParallel", "MASS", "Matrix", "VGAM", "bbmle", "gamlss", "maxLik", "pscl"] }, "DEsubs": { "name": "DEsubs", "version": "1.30.0", "sha256": "0p3vkm6116zl157nivwnm68svwm9h9cp9cplz9hncfywcii9a579", - "depends": ["circlize", "DESeq2", "EBSeq", "edgeR", "ggplot2", "graph", "igraph", "jsonlite", "limma", "locfit", "Matrix", "NBPSeq", "pheatmap", "RBGL"] + "depends": ["DESeq2", "EBSeq", "Matrix", "NBPSeq", "RBGL", "circlize", "edgeR", "ggplot2", "graph", "igraph", "jsonlite", "limma", "locfit", "pheatmap"] }, "DExMA": { "name": "DExMA", "version": "1.12.0", "sha256": "1mm45hvb3l1xvikgy25jxg9ppl71ha2sn4vh9qpf7wfr770hif3r", - "depends": ["Biobase", "bnstruct", "DExMAdata", "GEOquery", "impute", "limma", "pheatmap", "plyr", "RColorBrewer", "scales", "snpStats", "sva", "swamp"] + "depends": ["Biobase", "DExMAdata", "GEOquery", "RColorBrewer", "bnstruct", "impute", "limma", "pheatmap", "plyr", "scales", "snpStats", "sva", "swamp"] }, "DFP": { "name": "DFP", @@ -1591,37 +1603,37 @@ "name": "DIAlignR", "version": "2.12.0", "sha256": "19zgjnd9sjxx09pcf50fl3w4fmd1gj8g765x114l0cqcpk9qfmm5", - "depends": ["ape", "bit64", "data_table", "DBI", "dplyr", "ggplot2", "magrittr", "mzR", "phangorn", "pracma", "Rcpp", "RcppEigen", "reticulate", "rlang", "RMSNumpress", "RSQLite", "signal", "tidyr", "zoo"] + "depends": ["DBI", "RMSNumpress", "RSQLite", "Rcpp", "RcppEigen", "ape", "bit64", "data_table", "dplyr", "ggplot2", "magrittr", "mzR", "phangorn", "pracma", "reticulate", "rlang", "signal", "tidyr", "zoo"] }, "DMCFB": { "name": "DMCFB", "version": "1.18.0", "sha256": "0hpf7qkjy7hms4bpqb6y15gwkfah6p69icwab2vwsgmz8w94c44a", - "depends": ["arm", "benchmarkme", "BiocParallel", "data_table", "fastDummies", "GenomicRanges", "IRanges", "MASS", "matrixStats", "rtracklayer", "S4Vectors", "speedglm", "SummarizedExperiment", "tibble"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "SummarizedExperiment", "arm", "benchmarkme", "data_table", "fastDummies", "matrixStats", "rtracklayer", "speedglm", "tibble"] }, "DMCHMM": { "name": "DMCHMM", "version": "1.26.0", "sha256": "0rv1v08nf7vbxci28j68sjxq77lj0swis26ryxp156alr397jfby", - "depends": ["BiocParallel", "calibrate", "fdrtool", "GenomicRanges", "IRanges", "multcomp", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "calibrate", "fdrtool", "multcomp", "rtracklayer"] }, "DMRScan": { "name": "DMRScan", "version": "1.26.0", "sha256": "0j68kxzmn3kskqy88j1dqznigiw1rb3b14hwnvcmyckmyhiysx73", - "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "Matrix", "mvtnorm", "RcppRoll"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "Matrix", "RcppRoll", "mvtnorm"] }, "DMRcaller": { "name": "DMRcaller", "version": "1.36.0", "sha256": "0r9xm77y6xs4mginwfshnpvn2l8phpag35a8mcasj63aqs05js2h", - "depends": ["betareg", "GenomicRanges", "IRanges", "Rcpp", "RcppRoll", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "Rcpp", "RcppRoll", "S4Vectors", "betareg"] }, "DMRcate": { "name": "DMRcate", - "version": "3.0.1", - "sha256": "091bj5dkcqci032x01cnzryjjy5cw6l4cci9mlll0bm2g4l4k7p5", - "depends": ["AnnotationHub", "biomaRt", "bsseq", "edgeR", "ExperimentHub", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "limma", "minfi", "missMethyl", "plyr", "S4Vectors", "SummarizedExperiment"] + "version": "3.0.5", + "sha256": "1m5ilcpknzxd3cdk0kyvqqsahshlwxi7xpscigr4w7a83p775vqc", + "depends": ["AnnotationHub", "ExperimentHub", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "SummarizedExperiment", "biomaRt", "bsseq", "edgeR", "limma", "minfi", "missMethyl", "plyr"] }, "DNABarcodeCompatibility": { "name": "DNABarcodeCompatibility", @@ -1645,25 +1657,25 @@ "name": "DNAfusion", "version": "1.6.0", "sha256": "1rdm6x8dzk02ggx33bx9mgcq1p36ryysyxha333j05aysn2az2x0", - "depends": ["bamsignals", "BiocBaseUtils", "BiocGenerics", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["BiocBaseUtils", "BiocGenerics", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "TxDb_Hsapiens_UCSC_hg38_knownGene", "bamsignals"] }, "DNAshapeR": { "name": "DNAshapeR", "version": "1.32.0", "sha256": "0s5z3bh5dlym810rkb9i3bfxfap91qh7hj070i1nqnf4g2vamx9g", - "depends": ["Biostrings", "fields", "GenomicRanges", "Rcpp"] + "depends": ["Biostrings", "GenomicRanges", "Rcpp", "fields"] }, "DOSE": { "name": "DOSE", - "version": "3.30.1", - "sha256": "1kyrr1xxcif45ynyq4wsv2247bjily5sgzn17m1g3ypw2hkqcj53", - "depends": ["AnnotationDbi", "BiocParallel", "fgsea", "ggplot2", "GOSemSim", "HDO_db", "qvalue", "reshape2", "yulab_utils"] + "version": "3.30.2", + "sha256": "1jf6l0ngmdz1lca2rcjg3rhi9qdrv1pzmn93wa09svi4glsfhy1h", + "depends": ["AnnotationDbi", "BiocParallel", "GOSemSim", "HDO_db", "fgsea", "ggplot2", "qvalue", "reshape2", "yulab_utils"] }, "DRIMSeq": { "name": "DRIMSeq", "version": "1.32.0", "sha256": "10skx3n3r9vp1p1499ddccgabi7q3cy1dpi5pbp4ap0gff5ika5x", - "depends": ["BiocGenerics", "BiocParallel", "edgeR", "GenomicRanges", "ggplot2", "IRanges", "limma", "MASS", "reshape2", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "edgeR", "ggplot2", "limma", "reshape2"] }, "DSS": { "name": "DSS", @@ -1681,13 +1693,13 @@ "name": "DaMiRseq", "version": "2.16.0", "sha256": "029idkjbha250f8wgwy6sjnjvlxqs0lkwal066693mc2h40rql11", - "depends": ["arm", "caret", "corrplot", "DESeq2", "e1071", "EDASeq", "edgeR", "FactoMineR", "FSelector", "ggplot2", "Hmisc", "ineq", "kknn", "limma", "lubridate", "MASS", "pheatmap", "pls", "plsVarSel", "plyr", "randomForest", "RColorBrewer", "reshape2", "RSNNS", "SummarizedExperiment", "sva"] + "depends": ["DESeq2", "EDASeq", "FSelector", "FactoMineR", "Hmisc", "MASS", "RColorBrewer", "RSNNS", "SummarizedExperiment", "arm", "caret", "corrplot", "e1071", "edgeR", "ggplot2", "ineq", "kknn", "limma", "lubridate", "pheatmap", "pls", "plsVarSel", "plyr", "randomForest", "reshape2", "sva"] }, "Damsel": { "name": "Damsel", "version": "1.0.0", "sha256": "0n60wkrwk1npg1361x5plam6rabmqzlxdcij1qf5q351wfkqlp8y", - "depends": ["AnnotationDbi", "Biostrings", "dplyr", "edgeR", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "goseq", "magrittr", "patchwork", "plyranges", "reshape2", "rlang", "Rsamtools", "Rsubread", "stringr", "tidyr"] + "depends": ["AnnotationDbi", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Rsamtools", "Rsubread", "dplyr", "edgeR", "ggbio", "ggplot2", "goseq", "magrittr", "patchwork", "plyranges", "reshape2", "rlang", "stringr", "tidyr"] }, "DeMAND": { "name": "DeMAND", @@ -1699,13 +1711,13 @@ "name": "DeMixT", "version": "1.20.0", "sha256": "1hnaaidmflyh768pc1ivlq8rfjh5vrwycc0r6k1cyiinm53vknns", - "depends": ["base64enc", "dendextend", "DSS", "ggplot2", "KernSmooth", "knitr", "matrixcalc", "matrixStats", "psych", "Rcpp", "rmarkdown", "SummarizedExperiment", "sva", "truncdist"] + "depends": ["DSS", "KernSmooth", "Rcpp", "SummarizedExperiment", "base64enc", "dendextend", "ggplot2", "knitr", "matrixStats", "matrixcalc", "psych", "rmarkdown", "sva", "truncdist"] }, "DeProViR": { "name": "DeProViR", "version": "1.0.0", "sha256": "0m1nhzq5kl6jyi3d8fzb77iplzc4p85v7lj5q7i7125kjv6bycsm", - "depends": ["BiocFileCache", "caret", "data_table", "dplyr", "fmsb", "ggplot2", "keras", "pROC", "PRROC", "readr"] + "depends": ["BiocFileCache", "PRROC", "caret", "data_table", "dplyr", "fmsb", "ggplot2", "keras", "pROC", "readr"] }, "DeconRNASeq": { "name": "DeconRNASeq", @@ -1717,19 +1729,19 @@ "name": "DeepPINCS", "version": "1.12.0", "sha256": "148klzaqa01yns02x38vnd3gn46ayi7p0z2f2s7m95ralby95qm0", - "depends": ["CatEncoders", "keras", "matlab", "PRROC", "purrr", "rcdk", "reticulate", "stringdist", "tensorflow", "tokenizers", "ttgsea", "webchem"] + "depends": ["CatEncoders", "PRROC", "keras", "matlab", "purrr", "rcdk", "reticulate", "stringdist", "tensorflow", "tokenizers", "ttgsea", "webchem"] }, "DegCre": { "name": "DegCre", "version": "1.0.0", "sha256": "1wv2h8x45qsj8p4awwb22z1ilymmkrgmrhsl2y7l7dx13qh5l3dr", - "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "IRanges", "plotgardener", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "S4Vectors", "plotgardener"] }, "DegNorm": { "name": "DegNorm", "version": "1.14.0", "sha256": "15bh4x6rnqil3gcwialcpnqq5inznmjhzf0f4r54xylril0ad268", - "depends": ["data_table", "doParallel", "foreach", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "heatmaply", "IRanges", "plotly", "plyr", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "txdbmaker", "viridis"] + "depends": ["GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "data_table", "doParallel", "foreach", "ggplot2", "heatmaply", "plotly", "plyr", "txdbmaker", "viridis"] }, "DelayedArray": { "name": "DelayedArray", @@ -1753,13 +1765,13 @@ "name": "DelayedRandomArray", "version": "1.12.0", "sha256": "0lzx0p9hq4vd6w1rvlqd98b3rvfs1zzgvqm21s99vlmdc3db5pqn", - "depends": ["BH", "DelayedArray", "dqrng", "Rcpp"] + "depends": ["BH", "DelayedArray", "Rcpp", "dqrng"] }, "DelayedTensor": { "name": "DelayedTensor", "version": "1.10.0", "sha256": "1f8qpi3xfhgng7zjm7zdxmd32ynri2mavxs6ffqg1izclrzqsb5q", - "depends": ["BiocSingular", "DelayedArray", "DelayedRandomArray", "einsum", "HDF5Array", "irlba", "Matrix", "rTensor"] + "depends": ["BiocSingular", "DelayedArray", "DelayedRandomArray", "HDF5Array", "Matrix", "einsum", "irlba", "rTensor"] }, "DepInfeR": { "name": "DepInfeR", @@ -1771,13 +1783,13 @@ "name": "DepecheR", "version": "1.20.0", "sha256": "15lpn1p2p28lhmzi7svszr0p1zkyaivi69q8pxcrv4lvips38hk4", - "depends": ["beanplot", "ClusterR", "collapse", "doSNOW", "dplyr", "FNN", "foreach", "ggplot2", "gmodels", "gplots", "MASS", "matrixStats", "mixOmics", "moments", "Rcpp", "RcppEigen", "reshape2", "robustbase", "viridis"] + "depends": ["ClusterR", "FNN", "MASS", "Rcpp", "RcppEigen", "beanplot", "collapse", "doSNOW", "dplyr", "foreach", "ggplot2", "gmodels", "gplots", "matrixStats", "mixOmics", "moments", "reshape2", "robustbase", "viridis"] }, "DiffBind": { "name": "DiffBind", "version": "3.14.0", "sha256": "1sr0zy5pbjmjzkwkpjmr26k4dcf3f3kxsl7z2nqw0p0a14rh57pm", - "depends": ["amap", "apeglm", "ashr", "BiocParallel", "DESeq2", "dplyr", "GenomicAlignments", "GenomicRanges", "ggplot2", "ggrepel", "gplots", "GreyListChIP", "IRanges", "lattice", "limma", "locfit", "RColorBrewer", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "systemPipeR"] + "depends": ["BiocParallel", "DESeq2", "GenomicAlignments", "GenomicRanges", "GreyListChIP", "IRanges", "RColorBrewer", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "amap", "apeglm", "ashr", "dplyr", "ggplot2", "ggrepel", "gplots", "lattice", "limma", "locfit", "systemPipeR"] }, "DiffLogo": { "name": "DiffLogo", @@ -1787,15 +1799,15 @@ }, "DifferentialRegulation": { "name": "DifferentialRegulation", - "version": "2.2.0", - "sha256": "105jwyiqz3z12q4vmrsmw5d8j8w0s5prfa0l8z68jj36g8rxbl21", - "depends": ["BANDITS", "data_table", "doParallel", "doRNG", "foreach", "ggplot2", "gridExtra", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "SummarizedExperiment", "tximport"] + "version": "2.2.1", + "sha256": "170sfmm11vcgwi4wak6y699cnmbqiw4p8bipb5k7qzqaww99541s", + "depends": ["BANDITS", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "SummarizedExperiment", "data_table", "doParallel", "doRNG", "foreach", "ggplot2", "gridExtra", "tximport"] }, "Dino": { "name": "Dino", "version": "1.10.0", "sha256": "0nfn61i6iczg3k8brfajddlxavskjzm0x56qliy81f76sjb3njr3", - "depends": ["BiocParallel", "BiocSingular", "Matrix", "matrixStats", "S4Vectors", "scran", "Seurat", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "BiocSingular", "Matrix", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "matrixStats", "scran"] }, "Director": { "name": "Director", @@ -1813,19 +1825,19 @@ "name": "DiscoRhythm", "version": "1.20.0", "sha256": "14scrzsx36j6rbnav5hn8xykhwyswr85kkvdvg66g4xdwc3d6v7b", - "depends": ["BiocGenerics", "BiocStyle", "broom", "data_table", "dplyr", "DT", "ggExtra", "ggplot2", "gridExtra", "heatmaply", "kableExtra", "knitr", "magick", "matrixStats", "matrixTests", "MetaCycle", "plotly", "reshape2", "rmarkdown", "S4Vectors", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinyjs", "SummarizedExperiment", "UpSetR", "VennDiagram", "viridis", "zip"] + "depends": ["BiocGenerics", "BiocStyle", "DT", "MetaCycle", "S4Vectors", "SummarizedExperiment", "UpSetR", "VennDiagram", "broom", "data_table", "dplyr", "ggExtra", "ggplot2", "gridExtra", "heatmaply", "kableExtra", "knitr", "magick", "matrixStats", "matrixTests", "plotly", "reshape2", "rmarkdown", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinyjs", "viridis", "zip"] }, "DominoEffect": { "name": "DominoEffect", "version": "1.24.0", "sha256": "1lwvji698xi63rx4i3g73xkv4k53m3gbjgkbcmxgm0gagn1mrczl", - "depends": ["AnnotationDbi", "biomaRt", "Biostrings", "data_table", "GenomeInfoDb", "GenomicRanges", "IRanges", "pwalign", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["AnnotationDbi", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "SummarizedExperiment", "VariantAnnotation", "biomaRt", "data_table", "pwalign"] }, "Doscheda": { "name": "Doscheda", "version": "1.26.0", "sha256": "0iqcsyk4y8wkhf9s84hzm4rdmyg7bb5db7frm6xbxlsydfpzqy3l", - "depends": ["affy", "calibrate", "corrgram", "drc", "DT", "ggplot2", "gridExtra", "httr", "jsonlite", "limma", "matrixStats", "prodlim", "readxl", "reshape2", "shiny", "shinydashboard", "stringr", "vsn"] + "depends": ["DT", "affy", "calibrate", "corrgram", "drc", "ggplot2", "gridExtra", "httr", "jsonlite", "limma", "matrixStats", "prodlim", "readxl", "reshape2", "shiny", "shinydashboard", "stringr", "vsn"] }, "DriverNet": { "name": "DriverNet", @@ -1837,19 +1849,19 @@ "name": "DropletUtils", "version": "1.24.0", "sha256": "01y88cnii02sn1jgyvvmbx8j60qbzqyznqfxzv06yi4y0xj37klg", - "depends": ["beachmat", "BH", "BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "dqrng", "edgeR", "GenomicRanges", "HDF5Array", "IRanges", "Matrix", "R_utils", "Rcpp", "rhdf5", "Rhdf5lib", "S4Vectors", "scuttle", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BH", "BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GenomicRanges", "HDF5Array", "IRanges", "Matrix", "R_utils", "Rcpp", "Rhdf5lib", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "beachmat", "dqrng", "edgeR", "rhdf5", "scuttle"] }, "DrugVsDisease": { "name": "DrugVsDisease", "version": "2.46.0", "sha256": "1bzjjvv94hiyh7m0iqrvgl6lgxzz6s8jy5ry1mj2w821ivhz1gpy", - "depends": ["affy", "annotate", "ArrayExpress", "BiocGenerics", "biomaRt", "cMap2data", "DrugVsDiseasedata", "GEOquery", "hgu133a_db", "hgu133a2_db", "hgu133plus2_db", "limma", "qvalue", "RUnit", "xtable"] + "depends": ["ArrayExpress", "BiocGenerics", "DrugVsDiseasedata", "GEOquery", "RUnit", "affy", "annotate", "biomaRt", "cMap2data", "hgu133a2_db", "hgu133a_db", "hgu133plus2_db", "limma", "qvalue", "xtable"] }, "Dune": { "name": "Dune", "version": "1.16.0", "sha256": "0fiqbh9ywip75sxy54y76nbbqg6maji40d189qxarckdlmj09m7z", - "depends": ["aricode", "BiocParallel", "dplyr", "gganimate", "ggplot2", "magrittr", "purrr", "RColorBrewer", "SummarizedExperiment", "tidyr"] + "depends": ["BiocParallel", "RColorBrewer", "SummarizedExperiment", "aricode", "dplyr", "gganimate", "ggplot2", "magrittr", "purrr", "tidyr"] }, "DynDoc": { "name": "DynDoc", @@ -1861,7 +1873,7 @@ "name": "EBImage", "version": "4.46.0", "sha256": "0qaafn9l9lwrj0yph74g39pghjpg009qz7by64frxg1q0j7ksd2w", - "depends": ["abind", "BiocGenerics", "fftwtools", "htmltools", "htmlwidgets", "jpeg", "locfit", "png", "RCurl", "tiff"] + "depends": ["BiocGenerics", "RCurl", "abind", "fftwtools", "htmltools", "htmlwidgets", "jpeg", "locfit", "png", "tiff"] }, "EBSEA": { "name": "EBSEA", @@ -1873,7 +1885,7 @@ "name": "EBSeq", "version": "2.2.0", "sha256": "1lbvrw6fcjhrm6v71lmnphv4hbdh03czgx3822ckdk6xrvyh54cf", - "depends": ["BH", "blockmodeling", "gplots", "Rcpp", "RcppEigen", "testthat"] + "depends": ["BH", "Rcpp", "RcppEigen", "blockmodeling", "gplots", "testthat"] }, "EBarrays": { "name": "EBarrays", @@ -1891,7 +1903,7 @@ "name": "EDASeq", "version": "2.38.0", "sha256": "18h9zlah21lghy1sjpnzy6lddmff8vh3raxnqi15v00za9azk8yq", - "depends": ["AnnotationDbi", "aroma_light", "Biobase", "BiocGenerics", "BiocManager", "biomaRt", "Biostrings", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "ShortRead"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocManager", "Biostrings", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "ShortRead", "aroma_light", "biomaRt"] }, "EDIRquery": { "name": "EDIRquery", @@ -1903,19 +1915,19 @@ "name": "EGAD", "version": "1.32.0", "sha256": "0y1fwvqmrvv8v7i8ncqaxbmpflaybbgnjn09qqzpmsavfk10wvgh", - "depends": ["Biobase", "GEOquery", "gplots", "igraph", "impute", "limma", "MASS", "plyr", "RColorBrewer", "RCurl", "zoo"] + "depends": ["Biobase", "GEOquery", "MASS", "RColorBrewer", "RCurl", "gplots", "igraph", "impute", "limma", "plyr", "zoo"] }, "EGSEA": { "name": "EGSEA", "version": "1.32.0", "sha256": "1fpa26l0jimy1b36cw71abgmn1zj10j4lkpc5g4k09kc74nmivqi", - "depends": ["AnnotationDbi", "Biobase", "DT", "edgeR", "EGSEAdata", "gage", "ggplot2", "globaltest", "gplots", "GSVA", "HTMLUtils", "htmlwidgets", "hwriter", "limma", "metap", "org_Hs_eg_db", "org_Mm_eg_db", "org_Rn_eg_db", "PADOG", "pathview", "plotly", "RColorBrewer", "safe", "stringi", "topGO"] + "depends": ["AnnotationDbi", "Biobase", "DT", "EGSEAdata", "GSVA", "HTMLUtils", "PADOG", "RColorBrewer", "edgeR", "gage", "ggplot2", "globaltest", "gplots", "htmlwidgets", "hwriter", "limma", "metap", "org_Hs_eg_db", "org_Mm_eg_db", "org_Rn_eg_db", "pathview", "plotly", "safe", "stringi", "topGO"] }, "ELMER": { "name": "ELMER", "version": "2.28.0", "sha256": "012vxjagm3m9v98ds89xfwncnxzhwqlk7yigadnw73vg5r8ix6zd", - "depends": ["biomaRt", "circlize", "ComplexHeatmap", "DelayedArray", "doParallel", "downloader", "dplyr", "ELMER_data", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "Gviz", "IRanges", "lattice", "magrittr", "Matrix", "MultiAssayExperiment", "plotly", "plyr", "progress", "purrr", "readr", "reshape", "reshape2", "rmarkdown", "rtracklayer", "rvest", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "TCGAbiolinks", "tibble", "tidyr", "xml2"] + "depends": ["ComplexHeatmap", "DelayedArray", "ELMER_data", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "Matrix", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "TCGAbiolinks", "biomaRt", "circlize", "doParallel", "downloader", "dplyr", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "lattice", "magrittr", "plotly", "plyr", "progress", "purrr", "readr", "reshape", "reshape2", "rmarkdown", "rtracklayer", "rvest", "scales", "stringr", "tibble", "tidyr", "xml2"] }, "EMDomics": { "name": "EMDomics", @@ -1925,21 +1937,21 @@ }, "ENmix": { "name": "ENmix", - "version": "1.40.1", - "sha256": "1f41wvj1c78kkdrzp8dv5mfjfrjqpd32sp6lhh5mii1lvjb77ycc", - "depends": ["AnnotationHub", "Biobase", "doParallel", "dynamicTreeCut", "ExperimentHub", "foreach", "genefilter", "geneplotter", "gplots", "gtools", "illuminaio", "impute", "IRanges", "irlba", "matrixStats", "minfi", "quadprog", "RPMM", "S4Vectors", "SummarizedExperiment"] + "version": "1.40.2", + "sha256": "1x8rzdzymibypb65axx3sgxsgrj5d1fldj9j70acvg46lqhmq8f2", + "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "IRanges", "RPMM", "S4Vectors", "SummarizedExperiment", "doParallel", "dynamicTreeCut", "foreach", "genefilter", "geneplotter", "gplots", "gtools", "illuminaio", "impute", "irlba", "matrixStats", "minfi", "quadprog"] }, "ERSSA": { "name": "ERSSA", "version": "1.22.0", "sha256": "1bm64ydz0qlfm6vdrhqr699sc0njm6npdq0pmh2xb3w6iwh9dy92", - "depends": ["apeglm", "BiocParallel", "DESeq2", "edgeR", "ggplot2", "plyr", "RColorBrewer"] + "depends": ["BiocParallel", "DESeq2", "RColorBrewer", "apeglm", "edgeR", "ggplot2", "plyr"] }, "EWCE": { "name": "EWCE", "version": "1.12.0", "sha256": "19j1bl179kcih54ry9m4pgl9qvylkxyjaqk6pzna9wm5dpzdqnsl", - "depends": ["BiocParallel", "data_table", "DelayedArray", "dplyr", "ewceData", "ggplot2", "HGNChelper", "limma", "Matrix", "orthogene", "reshape2", "RNOmni", "SingleCellExperiment", "stringr", "SummarizedExperiment"] + "depends": ["BiocParallel", "DelayedArray", "HGNChelper", "Matrix", "RNOmni", "SingleCellExperiment", "SummarizedExperiment", "data_table", "dplyr", "ewceData", "ggplot2", "limma", "orthogene", "reshape2", "stringr"] }, "EasyCellType": { "name": "EasyCellType", @@ -1957,7 +1969,7 @@ "name": "EnMCB", "version": "1.16.0", "sha256": "1m3d92abl2qdkd82wnf6imx9xgxi4w94wiy84vnwn9g3r9kxl1p2", - "depends": ["BiocFileCache", "boot", "e1071", "ggplot2", "glmnet", "igraph", "Matrix", "mboost", "rms", "survival", "survivalROC", "survivalsvm"] + "depends": ["BiocFileCache", "Matrix", "boot", "e1071", "ggplot2", "glmnet", "igraph", "mboost", "rms", "survival", "survivalROC", "survivalsvm"] }, "EnhancedVolcano": { "name": "EnhancedVolcano", @@ -1969,61 +1981,61 @@ "name": "EnrichedHeatmap", "version": "1.34.0", "sha256": "0fmqz9xqs1108a5xxpsc63pplcc0i742r4zdk46p68my28ba2xfq", - "depends": ["circlize", "ComplexHeatmap", "GenomicRanges", "GetoptLong", "IRanges", "locfit", "matrixStats", "Rcpp"] + "depends": ["ComplexHeatmap", "GenomicRanges", "GetoptLong", "IRanges", "Rcpp", "circlize", "locfit", "matrixStats"] }, "EnrichmentBrowser": { "name": "EnrichmentBrowser", "version": "2.34.1", "sha256": "1drmdr1z2fyyf566vv5arkbwpfkwxajh555nasnkbnpqdrq3b93q", - "depends": ["AnnotationDbi", "BiocFileCache", "BiocManager", "edgeR", "GO_db", "graph", "graphite", "GSEABase", "hwriter", "KEGGgraph", "KEGGREST", "limma", "pathview", "Rgraphviz", "S4Vectors", "safe", "SPIA", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "BiocFileCache", "BiocManager", "GO_db", "GSEABase", "KEGGREST", "KEGGgraph", "Rgraphviz", "S4Vectors", "SPIA", "SummarizedExperiment", "edgeR", "graph", "graphite", "hwriter", "limma", "pathview", "safe"] }, "EpiDISH": { "name": "EpiDISH", "version": "2.20.0", "sha256": "17qkm5inavfdfrim9baqxdhs3w64c6y94qadw4y5p9xsck318frq", - "depends": ["e1071", "locfdr", "MASS", "Matrix", "matrixStats", "quadprog", "stringr"] + "depends": ["MASS", "Matrix", "e1071", "locfdr", "matrixStats", "quadprog", "stringr"] }, "EpiMix": { "name": "EpiMix", "version": "1.6.1", "sha256": "1m8mlxhci56d4d1iingwj8ddmddpm02an8dhh6m4ka4vpg7q51as", - "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "biomaRt", "data_table", "doParallel", "doSNOW", "downloader", "dplyr", "ELMER_data", "EpiMix_data", "ExperimentHub", "foreach", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "impute", "IRanges", "limma", "plyr", "progress", "R_matlab", "RColorBrewer", "RCurl", "rlang", "RPMM", "S4Vectors", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "ELMER_data", "EpiMix_data", "ExperimentHub", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "RCurl", "RPMM", "R_matlab", "S4Vectors", "SummarizedExperiment", "biomaRt", "data_table", "doParallel", "doSNOW", "downloader", "dplyr", "foreach", "ggplot2", "impute", "limma", "plyr", "progress", "rlang", "tibble", "tidyr"] }, "EpiTxDb": { "name": "EpiTxDb", "version": "1.16.0", "sha256": "11f2a9qhbl605mzj6z673j0hlgd3a80c2qigkcw9q81745rd5lrg", - "depends": ["AnnotationDbi", "BiocFileCache", "BiocGenerics", "Biostrings", "curl", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "httr", "IRanges", "Modstrings", "rex", "RSQLite", "S4Vectors", "tRNAdbImport", "txdbmaker", "xml2"] + "depends": ["AnnotationDbi", "BiocFileCache", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Modstrings", "RSQLite", "S4Vectors", "curl", "httr", "rex", "tRNAdbImport", "txdbmaker", "xml2"] }, "EventPointer": { "name": "EventPointer", "version": "3.12.0", "sha256": "1d13s9pww3kjdm0nfnz598jng9vl66jl6y52rczdcflxikfgip0i", - "depends": ["abind", "affxparser", "Biostrings", "BSgenome", "cobs", "doParallel", "fgsea", "foreach", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "glmnet", "graph", "igraph", "IRanges", "iterators", "limma", "lpSolve", "MASS", "Matrix", "matrixStats", "nnls", "poibin", "prodlim", "qvalue", "RBGL", "rhdf5", "S4Vectors", "SGSeq", "speedglm", "stringr", "SummarizedExperiment", "tximport"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MASS", "Matrix", "RBGL", "S4Vectors", "SGSeq", "SummarizedExperiment", "abind", "affxparser", "cobs", "doParallel", "fgsea", "foreach", "glmnet", "graph", "igraph", "iterators", "limma", "lpSolve", "matrixStats", "nnls", "poibin", "prodlim", "qvalue", "rhdf5", "speedglm", "stringr", "tximport"] }, "ExCluster": { "name": "ExCluster", "version": "1.22.0", "sha256": "1drpwz9pba4w36sbp53jrlmwbzr68fysrzqa06qb5347sxl94ac1", - "depends": ["GenomicRanges", "IRanges", "matrixStats", "Rsubread", "rtracklayer"] + "depends": ["GenomicRanges", "IRanges", "Rsubread", "matrixStats", "rtracklayer"] }, "ExiMiR": { "name": "ExiMiR", "version": "2.46.0", "sha256": "01bdi0d9afwyndfcjkaand4qpmbx6i437183s9g16i13vzwh1wk4", - "depends": ["affy", "affyio", "Biobase", "limma", "preprocessCore"] + "depends": ["Biobase", "affy", "affyio", "limma", "preprocessCore"] }, "ExperimentHub": { "name": "ExperimentHub", "version": "2.12.0", "sha256": "0mj1aqxyp84mn5m0fwk9lijysy594hhga3kv4mddv45vqxdsr08h", - "depends": ["AnnotationHub", "BiocFileCache", "BiocGenerics", "BiocManager", "rappdirs", "S4Vectors"] + "depends": ["AnnotationHub", "BiocFileCache", "BiocGenerics", "BiocManager", "S4Vectors", "rappdirs"] }, "ExperimentHubData": { "name": "ExperimentHubData", "version": "1.30.0", "sha256": "1adm3b0nacbdi4x5z71iiif9d876m3ip6crhbbr2hw4mbk6is7qn", - "depends": ["AnnotationHubData", "BiocGenerics", "BiocManager", "curl", "DBI", "ExperimentHub", "httr", "S4Vectors"] + "depends": ["AnnotationHubData", "BiocGenerics", "BiocManager", "DBI", "ExperimentHub", "S4Vectors", "curl", "httr"] }, "ExperimentSubset": { "name": "ExperimentSubset", @@ -2035,145 +2047,145 @@ "name": "ExploreModelMatrix", "version": "1.16.0", "sha256": "01ys9p7q3pmz7qfw1ggppchqq8yzrjsd91fa1r6h3a2rz8azdi2g", - 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"depends": ["fda", "MASS"] + "depends": ["MASS", "fda"] }, "FamAgg": { "name": "FamAgg", "version": "1.32.0", "sha256": "0qcd028bamdj4v24rdqymk2zc02kj7yc8p1q19vvzk8h1hxvh98l", - "depends": ["BiocGenerics", "gap", "igraph", "kinship2", "Matrix", "survey"] + "depends": ["BiocGenerics", "Matrix", "gap", "igraph", "kinship2", "survey"] }, "FastqCleaner": { "name": "FastqCleaner", "version": "1.22.0", "sha256": "0bwbg3b8w27whbg8gl2ga58fwm95cyra45f2y609izrx9vjz7dcr", - "depends": ["Biostrings", "DT", "htmltools", "IRanges", "Rcpp", "S4Vectors", "shiny", "shinyBS", "ShortRead"] + "depends": ["Biostrings", "DT", "IRanges", "Rcpp", "S4Vectors", "ShortRead", "htmltools", "shiny", "shinyBS"] }, "FeatSeekR": { "name": "FeatSeekR", "version": "1.4.0", "sha256": "0r72wl0wjzfvh8wmpn6ppffsh6yrydkyni1pbxsw865j5rkiiyqd", - "depends": ["MASS", "pheatmap", "pracma", "SummarizedExperiment"] + "depends": ["MASS", "SummarizedExperiment", "pheatmap", "pracma"] }, "FilterFFPE": { "name": "FilterFFPE", "version": "1.14.0", "sha256": "1pjks7wadlyyhaz9lcrhxamjqjaq0nnyxkv6jxb4adrh5hwvgxfx", - "depends": ["doParallel", "foreach", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "doParallel", "foreach"] }, "FindIT2": { "name": "FindIT2", "version": "1.10.0", "sha256": "03bfmxln17lnvzmmsc3g64nk1vs6fg4bphlszqgxhdxwbjjg4nf2", - "depends": ["BiocGenerics", "BiocParallel", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggrepel", "glmnet", "IRanges", "MultiAssayExperiment", "patchwork", "progress", "purrr", "qvalue", "rlang", "rtracklayer", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr", "withr"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "ggrepel", "glmnet", "patchwork", "progress", "purrr", "qvalue", "rlang", "rtracklayer", "stringr", "tibble", "tidyr", "withr"] }, "FitHiC": { "name": "FitHiC", "version": "1.30.0", "sha256": "107hm9k9wfr34fradldmjym2bzxb6qx8109p4a7xrqkiya0hmwwa", - "depends": ["data_table", "fdrtool", "Rcpp"] + "depends": ["Rcpp", "data_table", "fdrtool"] }, "FlowSOM": { "name": "FlowSOM", "version": "2.12.0", "sha256": "0xqrp184p00pvzzf6ddmp2r8lpg97bm0q6smjwcrfb8rn4msxmis", - "depends": ["BiocGenerics", "colorRamps", "ConsensusClusterPlus", "dplyr", "flowCore", "ggforce", "ggnewscale", "ggplot2", "ggpubr", "igraph", "magrittr", "rlang", "Rtsne", "tidyr", "XML"] + "depends": ["BiocGenerics", "ConsensusClusterPlus", "Rtsne", "XML", "colorRamps", "dplyr", "flowCore", "ggforce", "ggnewscale", "ggplot2", "ggpubr", "igraph", "magrittr", "rlang", "tidyr"] }, "FuseSOM": { "name": "FuseSOM", "version": "1.6.0", "sha256": "1qbk2rdc7fdhkglwzhsyrysb51qwjsyjy9m6pgbbcwi14iwwhnf2", - "depends": ["analogue", "cluster", "coop", "diptest", "fastcluster", "FCPS", "fpc", "ggplot2", "ggplotify", "ggpubr", "pheatmap", "proxy", "psych", "Rcpp", "S4Vectors", "stringr", "SummarizedExperiment"] + "depends": ["FCPS", "Rcpp", "S4Vectors", "SummarizedExperiment", "analogue", "cluster", "coop", "diptest", "fastcluster", "fpc", "ggplot2", "ggplotify", "ggpubr", "pheatmap", "proxy", "psych", "stringr"] }, "GA4GHclient": { "name": "GA4GHclient", "version": "1.28.0", "sha256": "1x5k9l2f4fw5da1aacwd0b7rn9kjpbzf8vl9h76n4d92fdh25jlh", - "depends": ["BiocGenerics", "Biostrings", "dplyr", "GenomeInfoDb", "GenomicRanges", "httr", "IRanges", "jsonlite", "S4Vectors", "VariantAnnotation"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "VariantAnnotation", "dplyr", "httr", "jsonlite"] }, "GA4GHshiny": { "name": "GA4GHshiny", "version": "1.26.0", "sha256": "1vj0p1akcgzq2q43yir0g2klggjw8970chhzibw7yb5qxr2fz9ai", - "depends": ["AnnotationDbi", "BiocGenerics", "dplyr", "DT", "GA4GHclient", "GenomeInfoDb", "GenomicFeatures", "openxlsx", "purrr", "S4Vectors", "shiny", "shinyjs", "shinythemes", "tidyr"] + "depends": ["AnnotationDbi", "BiocGenerics", "DT", "GA4GHclient", "GenomeInfoDb", "GenomicFeatures", "S4Vectors", "dplyr", "openxlsx", "purrr", "shiny", "shinyjs", "shinythemes", "tidyr"] }, "GARS": { "name": "GARS", "version": "1.24.0", "sha256": "1wi56b6h1fi1rr4hrpbby6iwgax36q01h6hr2nm4bgb7cx6l3bii", - "depends": ["cluster", "DaMiRseq", "ggplot2", "MLSeq", "SummarizedExperiment"] + "depends": ["DaMiRseq", "MLSeq", "SummarizedExperiment", "cluster", "ggplot2"] }, "GAprediction": { "name": "GAprediction", "version": "1.30.0", "sha256": "0p38ivjzp0nsyr85a323xgjwb2amsmvr10ajq9m51z9acl4jzakx", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "GBScleanR": { "name": "GBScleanR", "version": "1.8.18", "sha256": "1il1h9njfvhi4kxn30bhc31nkmr91b9imfafq68ccz947ckzhkpm", - "depends": ["expm", "gdsfmt", "ggplot2", "Rcpp", "RcppParallel", "SeqArray", "tidyr"] + "depends": ["Rcpp", "RcppParallel", "SeqArray", "expm", "gdsfmt", "ggplot2", "tidyr"] }, "GDCRNATools": { "name": "GDCRNATools", "version": "1.24.0", "sha256": "1grhgzl08f2infvvpd5084mvplvgqb0qa7d6afrfv6n5wigwnvbv", - "depends": ["BiocParallel", "biomaRt", "clusterProfiler", "DESeq2", "DOSE", "DT", "edgeR", "GenomicDataCommons", "ggplot2", "gplots", "jsonlite", "limma", "org_Hs_eg_db", "pathview", "rjson", "shiny", "survival", "survminer", "XML"] + "depends": ["BiocParallel", "DESeq2", "DOSE", "DT", "GenomicDataCommons", "XML", "biomaRt", "clusterProfiler", "edgeR", "ggplot2", "gplots", "jsonlite", "limma", "org_Hs_eg_db", "pathview", "rjson", "shiny", "survival", "survminer"] }, "GDSArray": { "name": "GDSArray", - "version": "1.24.0", - "sha256": "0s78y646vr1m2lcsg91yy5xzc328hfbx0lnzyfg9pavp0d12yzip", - "depends": ["BiocGenerics", "DelayedArray", "gdsfmt", "S4Vectors", "SeqArray", "SNPRelate"] + "version": "1.24.2", + "sha256": "01sjx63m9affj46s6l3byj9m127bipid230jdlxnwans38x5jsxr", + "depends": ["BiocGenerics", "DelayedArray", "S4Vectors", "SNPRelate", "SeqArray", "gdsfmt"] }, "GEM": { "name": "GEM", @@ -2185,7 +2197,7 @@ "name": "GENESIS", "version": "2.34.0", "sha256": "1jk0mw183v2nxabx58kwm8fwm6r2ikbc90ilxdmivfsxc7gx534r", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "data_table", "gdsfmt", "GenomicRanges", "GWASTools", "igraph", "IRanges", "Matrix", "reshape2", "S4Vectors", "SeqArray", "SeqVarTools", "SNPRelate"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "GWASTools", "GenomicRanges", "IRanges", "Matrix", "S4Vectors", "SNPRelate", "SeqArray", "SeqVarTools", "data_table", "gdsfmt", "igraph", "reshape2"] }, "GENIE3": { "name": "GENIE3", @@ -2197,13 +2209,13 @@ "name": "GEOexplorer", "version": "1.10.0", "sha256": "0hb9hgkb5nc2mdri18y22s4qi5hdp3zclmpdz2q7hdvqhqg6kqzv", - "depends": ["Biobase", "car", "DT", "edgeR", "enrichR", "factoextra", "GEOquery", "ggplot2", "heatmaply", "htmltools", "httr", "impute", "knitr", "limma", "markdown", "pheatmap", "plotly", "R_utils", "readxl", "scales", "shiny", "shinybusy", "shinycssloaders", "shinyHeatmaply", "stringr", "sva", "umap", "xfun", "XML", "xml2"] + "depends": ["Biobase", "DT", "GEOquery", "R_utils", "XML", "car", "edgeR", "enrichR", "factoextra", "ggplot2", "heatmaply", "htmltools", "httr", "impute", "knitr", "limma", "markdown", "pheatmap", "plotly", "readxl", "scales", "shiny", "shinyHeatmaply", "shinybusy", "shinycssloaders", "stringr", "sva", "umap", "xfun", "xml2"] }, "GEOfastq": { "name": "GEOfastq", "version": "1.12.0", "sha256": "18wi24a6j04fflank3rw4z852j21zarca0by7g5kwq1ym2dy2xld", - "depends": ["doParallel", "foreach", "plyr", "RCurl", "rvest", "stringr", "xml2"] + "depends": ["RCurl", "doParallel", "foreach", "plyr", "rvest", "stringr", "xml2"] }, "GEOmetadb": { "name": "GEOmetadb", @@ -2215,13 +2227,13 @@ "name": "GEOquery", "version": "2.72.0", "sha256": "0rqyv95l8h3s68ywhv3r7hm7j1mbm8prql7p2rlvv4xg31yqmnpl", - "depends": ["Biobase", "curl", "data_table", "dplyr", "limma", "magrittr", "R_utils", "readr", "tidyr", "xml2"] + "depends": ["Biobase", "R_utils", "curl", "data_table", "dplyr", "limma", "magrittr", "readr", "tidyr", "xml2"] }, "GEOsubmission": { "name": "GEOsubmission", "version": "1.56.0", "sha256": "1kvk6v1pj6f252lzlvw79ffd7wadlc6kvpa174msi75ww5s2qfc0", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "GEWIST": { "name": "GEWIST", @@ -2233,13 +2245,13 @@ "name": "GGPA", "version": "1.16.0", "sha256": "1lg62vxn4z6z3l9d18gmyvdr456hs76lczxfq8j2w509gflcrskb", - "depends": ["GGally", "matrixStats", "network", "Rcpp", "RcppArmadillo", "scales", "sna"] + "depends": ["GGally", "Rcpp", "RcppArmadillo", "matrixStats", "network", "scales", "sna"] }, "GIGSEA": { "name": "GIGSEA", "version": "1.22.0", "sha256": "1yhxpm1amm6anzcss31pkg5xzw4q1nq1hjb6rx5p7a5dh9h8hdna", - "depends": ["locfdr", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "locfdr"] }, "GLAD": { "name": "GLAD", @@ -2251,19 +2263,19 @@ "name": "GMRP", "version": "1.32.0", "sha256": "0g2pmnngpv9k7gaz7bd5b0gn9i0i86q36fcapai93w76ml8ccvab", - "depends": ["diagram", "GenomicRanges", "plotrix"] + "depends": ["GenomicRanges", "diagram", "plotrix"] }, "GNET2": { "name": "GNET2", "version": "1.20.0", "sha256": "1hgzvl4k5q84ig9njmfvmdwc64h7nwsg0kcsi3da3mizxahaj780", - "depends": ["DiagrammeR", "dplyr", "ggplot2", "igraph", "matrixStats", "Rcpp", "reshape2", "SummarizedExperiment", "xgboost"] + "depends": ["DiagrammeR", "Rcpp", "SummarizedExperiment", "dplyr", "ggplot2", "igraph", "matrixStats", "reshape2", "xgboost"] }, "GNOSIS": { "name": "GNOSIS", "version": "1.2.0", "sha256": "0m20w85kixxqydrrf5cbphr1hvzlc2wmwjf68s9rr0llcfv7gy3r", - "depends": ["car", "cBioPortalData", "compareGroups", "dashboardthemes", "DescTools", "DT", "fabricatr", "fontawesome", "maftools", "magrittr", "operator_tools", "partykit", "RColorBrewer", "reshape2", "rpart", "rstatix", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "shinylogs", "shinymeta", "shinyWidgets", "survival", "survminer", "tidyverse"] + "depends": ["DT", "DescTools", "RColorBrewer", "cBioPortalData", "car", "compareGroups", "dashboardthemes", "fabricatr", "fontawesome", "maftools", "magrittr", "operator_tools", "partykit", "reshape2", "rpart", "rstatix", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "shinylogs", "shinymeta", "survival", "survminer", "tidyverse"] }, "GOSemSim": { "name": "GOSemSim", @@ -2275,61 +2287,61 @@ "name": "GOTHiC", "version": "1.40.0", "sha256": "101mf3pkchz0il0czrwixx1pv8hq9cjh8m59nii00m2vwma3slrd", - "depends": ["BiocGenerics", "BiocManager", "Biostrings", "BSgenome", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "ShortRead"] + "depends": ["BSgenome", "BiocGenerics", "BiocManager", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "data_table", "ggplot2", "rtracklayer"] }, "GOexpress": { "name": "GOexpress", "version": "1.38.0", "sha256": "0hz01hmp4bf9njw79zqy08zx9q3c6qfs2xykz5x7xkngp65mzkxf", - "depends": ["Biobase", "biomaRt", "ggplot2", "gplots", "randomForest", "RColorBrewer", "RCurl", "stringr"] + "depends": ["Biobase", "RColorBrewer", "RCurl", "biomaRt", "ggplot2", "gplots", "randomForest", "stringr"] }, "GOfuncR": { "name": "GOfuncR", "version": "1.24.0", "sha256": "1g3nppcmyj81ia3v9zvsr8jplk8kmvssspvxd94zxh6yb3wrrc6v", - "depends": ["AnnotationDbi", "GenomicRanges", "gtools", "IRanges", "mapplots", "Rcpp", "vioplot"] + "depends": ["AnnotationDbi", "GenomicRanges", "IRanges", "Rcpp", "gtools", "mapplots", "vioplot"] }, "GOpro": { "name": "GOpro", "version": "1.30.0", "sha256": "0s8yyg5myxvw61zai54d3dhai1cm43i8s8wnpf0qc476q4v2xgzl", - "depends": ["AnnotationDbi", "BH", "dendextend", "doParallel", "foreach", "GO_db", "IRanges", "MultiAssayExperiment", "org_Hs_eg_db", "Rcpp", "S4Vectors"] + "depends": ["AnnotationDbi", "BH", "GO_db", "IRanges", "MultiAssayExperiment", "Rcpp", "S4Vectors", "dendextend", "doParallel", "foreach", "org_Hs_eg_db"] }, "GOstats": { "name": "GOstats", "version": "2.70.0", "sha256": "1dygsr8nlqksfpk00lk67dhj4fcpjg1x4dbl2r4sfanlk4hq76cs", - "depends": ["annotate", "AnnotationDbi", "AnnotationForge", "Biobase", "Category", "GO_db", "graph", "RBGL", "Rgraphviz"] + "depends": ["AnnotationDbi", "AnnotationForge", "Biobase", "Category", "GO_db", "RBGL", "Rgraphviz", "annotate", "graph"] }, "GPA": { "name": "GPA", "version": "1.16.0", "sha256": "1z97rwlqvahsjcrm1j00cz9lgnw1wym6lwhi7gf8g17avgk6s7g4", - "depends": ["DT", "ggplot2", "ggrepel", "plyr", "Rcpp", "shiny", "shinyBS", "vegan"] + "depends": ["DT", "Rcpp", "ggplot2", "ggrepel", "plyr", "shiny", "shinyBS", "vegan"] }, "GRENITS": { "name": "GRENITS", "version": "1.56.0", "sha256": "04nbvr080s6syb2d981g4402ghl2gh6f2gwsiv41nnj4narvs752", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "reshape2"] }, "GRaNIE": { "name": "GRaNIE", "version": "1.8.0", "sha256": "1zdi6h1kmnj3b23qv268jg0iqfvgvn0h17d5l17yx3si9czcr8qr", - "depends": ["AnnotationHub", "biomaRt", "Biostrings", "checkmate", "circlize", "colorspace", "ComplexHeatmap", "data_table", "DESeq2", "dplyr", "ensembldb", "forcats", "futile_logger", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "igraph", "limma", "magrittr", "Matrix", "matrixStats", "patchwork", "progress", "RColorBrewer", "readr", "reshape2", "rlang", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "topGO", "viridis"] + "depends": ["AnnotationHub", "Biostrings", "ComplexHeatmap", "DESeq2", "GenomeInfoDb", "GenomicRanges", "Matrix", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "biomaRt", "checkmate", "circlize", "colorspace", "data_table", "dplyr", "ensembldb", "forcats", "futile_logger", "ggplot2", "gridExtra", "igraph", "limma", "magrittr", "matrixStats", "patchwork", "progress", "readr", "reshape2", "rlang", "scales", "stringr", "tibble", "tidyr", "tidyselect", "topGO", "viridis"] }, "GRmetrics": { "name": "GRmetrics", "version": "1.30.0", "sha256": "02dqb1n4q5zwhfhmdrynfa5djgnvry11x69r3z94rscxl94k9pan", - "depends": ["drc", "ggplot2", "plotly", "S4Vectors", "SummarizedExperiment"] + "depends": ["S4Vectors", "SummarizedExperiment", "drc", "ggplot2", "plotly"] }, "GSALightning": { "name": "GSALightning", "version": "1.32.0", "sha256": "0cmp5c22fhykld7napzk2220lzzizslsx2zi0slmiifapcrjg9vy", - "depends": ["data_table", "Matrix"] + "depends": ["Matrix", "data_table"] }, "GSAR": { "name": "GSAR", @@ -2341,19 +2353,19 @@ "name": "GSCA", "version": "2.34.0", "sha256": "1lycrigmlr8kcmc1svnxl3g8rzlhpk8kfmvspllyfp8cls35mypw", - "depends": ["ggplot2", "gplots", "RColorBrewer", "reshape2", "rhdf5", "shiny", "sp"] + "depends": ["RColorBrewer", "ggplot2", "gplots", "reshape2", "rhdf5", "shiny", "sp"] }, "GSEABase": { "name": "GSEABase", "version": "1.66.0", "sha256": "1pnd8rmpk7gm89cvrqa8qwk40dszkfkhyydxp3gl13zng9c5bq40", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "graph", "XML"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "XML", "annotate", "graph"] }, "GSEABenchmarkeR": { "name": "GSEABenchmarkeR", "version": "1.24.0", "sha256": "11aczfpbc31wq9h2ri7gn17ki2f61s801zik2lkwgvly9627kfzi", - "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocFileCache", "BiocParallel", "edgeR", "EnrichmentBrowser", "ExperimentHub", "KEGGandMetacoreDzPathwaysGEO", "KEGGdzPathwaysGEO", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocFileCache", "BiocParallel", "EnrichmentBrowser", "ExperimentHub", "KEGGandMetacoreDzPathwaysGEO", "KEGGdzPathwaysGEO", "S4Vectors", "SummarizedExperiment", "edgeR"] }, "GSEAlm": { "name": "GSEAlm", @@ -2371,7 +2383,7 @@ "name": "GSRI", "version": "2.52.0", "sha256": "0b8r1cih0zn8aj9nbpmqwiiqfhk9a2f0bxcqyx77g5jlg9b504kq", - "depends": ["Biobase", "fdrtool", "genefilter", "GSEABase", "les"] + "depends": ["Biobase", "GSEABase", "fdrtool", "genefilter", "les"] }, "GSReg": { "name": "GSReg", @@ -2383,7 +2395,7 @@ "name": "GSVA", "version": "1.52.3", "sha256": "08nxg3q350n5gf975r6b0zq4cr7lchv2i811crc4xbb7q39kw8k4", - "depends": ["Biobase", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "GSEABase", "HDF5Array", "IRanges", "Matrix", "S4Vectors", "SingleCellExperiment", "sparseMatrixStats", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["Biobase", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "GSEABase", "HDF5Array", "IRanges", "Matrix", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "sparseMatrixStats"] }, "GSgalgoR": { "name": "GSgalgoR", @@ -2395,25 +2407,25 @@ "name": "GUIDEseq", "version": "1.34.0", "sha256": "1xn44w1z1izzf2qr4xsmrvc468swjp6zmf4wxc33jbk5r9lv0n0x", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "ChIPpeakAnno", "CRISPRseek", "data_table", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "hash", "IRanges", "limma", "matrixStats", "multtest", "openxlsx", "patchwork", "purrr", "pwalign", "rio", "rlang", "Rsamtools", "S4Vectors", "stringr", "tidyr"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "CRISPRseek", "ChIPpeakAnno", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "data_table", "dplyr", "ggplot2", "hash", "limma", "matrixStats", "multtest", "openxlsx", "patchwork", "purrr", "pwalign", "rio", "rlang", "stringr", "tidyr"] }, "GWAS_BAYES": { "name": "GWAS.BAYES", "version": "1.14.0", "sha256": "05fp1wrddk9a961cx2ps0cad9rzagsyrfyfck6h1v3xb5gmz03ik", - "depends": ["caret", "GA", "limma", "MASS", "Matrix", "memoise"] + "depends": ["GA", "MASS", "Matrix", "caret", "limma", "memoise"] }, "GWASTools": { "name": "GWASTools", "version": "1.50.0", "sha256": "013qv2wac90s1rv992bwzq4diqfq7r18qk7gcifmi22samplpnw4", - "depends": ["Biobase", "data_table", "DBI", "DNAcopy", "gdsfmt", "GWASExactHW", "lmtest", "logistf", "quantsmooth", "RSQLite", "sandwich", "survival"] + "depends": ["Biobase", "DBI", "DNAcopy", "GWASExactHW", "RSQLite", "data_table", "gdsfmt", "lmtest", "logistf", "quantsmooth", "sandwich", "survival"] }, "GWENA": { "name": "GWENA", "version": "1.14.0", "sha256": "1vwc7n0kyza4w3p7fbfrji6vamn042nwz4wa51ymcwg62j5k6yxk", - "depends": ["cluster", "dplyr", "dynamicTreeCut", "ggplot2", "gprofiler2", "igraph", "magrittr", "matrixStats", "NetRep", "purrr", "RColorBrewer", "rlist", "stringr", "SummarizedExperiment", "tibble", "tidyr", "WGCNA"] + "depends": ["NetRep", "RColorBrewer", "SummarizedExperiment", "WGCNA", "cluster", "dplyr", "dynamicTreeCut", "ggplot2", "gprofiler2", "igraph", "magrittr", "matrixStats", "purrr", "rlist", "stringr", "tibble", "tidyr"] }, "GateFinder": { "name": "GateFinder", @@ -2423,9 +2435,9 @@ }, "GeDi": { "name": "GeDi", - "version": "1.0.0", - "sha256": "193fnp0v74bsdszxxxywz9r45xqlmvn5vg0n5fcq1w8f15rpgizg", - "depends": ["BiocFileCache", "BiocNeighbors", "BiocParallel", "bs4Dash", "ComplexHeatmap", "dplyr", "DT", "fontawesome", "GeneTonic", "ggdendro", "ggplot2", "GOSemSim", "igraph", "Matrix", "plotly", "RColorBrewer", "readxl", "rintrojs", "scales", "shiny", "shinyBS", "shinycssloaders", "shinyWidgets", "STRINGdb", "tm", "visNetwork", "wordcloud2"] + "version": "1.0.1", + "sha256": "0s0fln04m7ywvv33qpagcabsp90v804fdd1yjzpqfk67xdwa1svg", + "depends": ["BiocFileCache", "BiocNeighbors", "BiocParallel", "ComplexHeatmap", "DT", "GOSemSim", "GeneTonic", "Matrix", "RColorBrewer", "STRINGdb", "bs4Dash", "dplyr", "fontawesome", "ggdendro", "ggplot2", "igraph", "plotly", "readxl", "rintrojs", "scales", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "tm", "visNetwork", "wordcloud2"] }, "GenProSeq": { "name": "GenProSeq", @@ -2437,7 +2449,7 @@ "name": "GenVisR", "version": "1.36.0", "sha256": "1xzzdy2mcy8as3szygly3kw6k7g5dp2vxmimcw6738fj37zbcd77", - "depends": ["AnnotationDbi", "BiocGenerics", "biomaRt", "Biostrings", "BSgenome", "data_table", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "gridExtra", "gtable", "gtools", "IRanges", "plyr", "reshape2", "Rsamtools", "scales", "VariantAnnotation", "viridis"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "VariantAnnotation", "biomaRt", "data_table", "ggplot2", "gridExtra", "gtable", "gtools", "plyr", "reshape2", "scales", "viridis"] }, "GeneBreak": { "name": "GeneBreak", @@ -2461,7 +2473,7 @@ "name": "GeneGeneInteR", "version": "1.30.0", "sha256": "05d9i4nz7gf6g0g1bp0zpn3kqqfzf1lcjy7y67m1z8s96svkal47", - "depends": ["data_table", "FactoMineR", "GenomicRanges", "igraph", "IRanges", "kernlab", "mvtnorm", "Rsamtools", "snpStats"] + "depends": ["FactoMineR", "GenomicRanges", "IRanges", "Rsamtools", "data_table", "igraph", "kernlab", "mvtnorm", "snpStats"] }, "GeneMeta": { "name": "GeneMeta", @@ -2473,49 +2485,49 @@ "name": "GeneNetworkBuilder", "version": "1.46.0", "sha256": "1gjirjj809c1vc3y4k07j8md0m0bksjkfy68v1v8b2d9kfws5vwc", - "depends": ["graph", "htmlwidgets", "plyr", "Rcpp", "Rgraphviz", "rjson", "XML"] + "depends": ["Rcpp", "Rgraphviz", "XML", "graph", "htmlwidgets", "plyr", "rjson"] }, "GeneOverlap": { "name": "GeneOverlap", "version": "1.40.0", "sha256": "0bfd4322m6g7dvas214i17k8sjsf62lza9darmhiwb4r8h30qmb2", - "depends": ["gplots", "RColorBrewer"] + "depends": ["RColorBrewer", "gplots"] }, "GeneRegionScan": { "name": "GeneRegionScan", "version": "1.60.0", "sha256": "01vrw0k8s62i3mzk5f7mrnh7294i5smqgfz00bl0wjhy9yak5j34", - "depends": ["affxparser", "Biobase", "Biostrings", "RColorBrewer", "S4Vectors"] + "depends": ["Biobase", "Biostrings", "RColorBrewer", "S4Vectors", "affxparser"] }, "GeneSelectMMD": { "name": "GeneSelectMMD", "version": "2.48.0", "sha256": "044i85vnvr5l1c1sbsh6s777invnch9yjkx3ffki9m0xnilvv5al", - "depends": ["Biobase", "limma", "MASS"] + "depends": ["Biobase", "MASS", "limma"] }, "GeneStructureTools": { "name": "GeneStructureTools", "version": "1.24.0", "sha256": "19inj0ds7hh4n5cq9mgi4ahx46cxpad2pfdmmhrzvlbm8ss4yw6x", - "depends": ["Biostrings", "BSgenome_Mmusculus_UCSC_mm10", "data_table", "GenomicRanges", "Gviz", "IRanges", "plyr", "rtracklayer", "S4Vectors", "stringdist", "stringr"] + "depends": ["BSgenome_Mmusculus_UCSC_mm10", "Biostrings", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "data_table", "plyr", "rtracklayer", "stringdist", "stringr"] }, "GeneTonic": { "name": "GeneTonic", "version": "2.8.0", "sha256": "0f84sbqkhh74al1rn8fhkg4vmy0i06qadl7342gawqngxfcffzkn", - "depends": ["AnnotationDbi", "backbone", "bs4Dash", "circlize", "colorspace", "colourpicker", "ComplexHeatmap", "ComplexUpset", "dendextend", "DESeq2", "dplyr", "DT", "dynamicTreeCut", "expm", "ggforce", "ggplot2", "ggrepel", "ggridges", "GO_db", "igraph", "matrixStats", "plotly", "RColorBrewer", "rintrojs", "rlang", "rmarkdown", "S4Vectors", "scales", "shiny", "shinyAce", "shinycssloaders", "shinyWidgets", "SummarizedExperiment", "tidyr", "tippy", "viridis", "visNetwork"] + "depends": ["AnnotationDbi", "ComplexHeatmap", "ComplexUpset", "DESeq2", "DT", "GO_db", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "backbone", "bs4Dash", "circlize", "colorspace", "colourpicker", "dendextend", "dplyr", "dynamicTreeCut", "expm", "ggforce", "ggplot2", "ggrepel", "ggridges", "igraph", "matrixStats", "plotly", "rintrojs", "rlang", "rmarkdown", "scales", "shiny", "shinyAce", "shinyWidgets", "shinycssloaders", "tidyr", "tippy", "viridis", "visNetwork"] }, "GeneticsPed": { "name": "GeneticsPed", "version": "1.66.0", "sha256": "0cm65szy3nmkaxsrmv1qhpk8jsxma6b4y0v2nxg6hdqjn7z4zk43", - "depends": ["gdata", "genetics", "MASS"] + "depends": ["MASS", "gdata", "genetics"] }, "GenomAutomorphism": { "name": "GenomAutomorphism", "version": "1.6.0", "sha256": "13hflp7aglv8xadf1zgla8d0j1h4m4rrk0lyy0i0mxfhihl0wba8", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "data_table", "doParallel", "dplyr", "foreach", "GenomeInfoDb", "GenomicRanges", "IRanges", "matrixStats", "numbers", "S4Vectors", "XVector"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "XVector", "data_table", "doParallel", "dplyr", "foreach", "matrixStats", "numbers"] }, "GenomeInfoDb": { "name": "GenomeInfoDb", @@ -2533,49 +2545,49 @@ "name": "GenomicDataCommons", "version": "1.28.0", "sha256": "0jg4sa1lqn028y2ympb3x4s8yr7qa8ajrwqj2hhcl8zss3sx8gr2", - "depends": ["dplyr", "GenomicRanges", "httr", "IRanges", "jsonlite", "magrittr", "rappdirs", "readr", "rlang", "tibble", "tidyr", "xml2"] + "depends": ["GenomicRanges", "IRanges", "dplyr", "httr", "jsonlite", "magrittr", "rappdirs", "readr", "rlang", "tibble", "tidyr", "xml2"] }, "GenomicDistributions": { "name": "GenomicDistributions", "version": "1.12.0", "sha256": "0yicpl29qcwyzswaxqd50sa12lg8c9d5i7xgdf2m7jwskx6nx5hx", - "depends": ["Biostrings", "broom", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "plyr", "reshape2", "scales"] + "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "broom", "data_table", "dplyr", "ggplot2", "plyr", "reshape2", "scales"] }, "GenomicFeatures": { "name": "GenomicFeatures", "version": "1.56.0", "sha256": "1r1d9g5vq5y946v2z2xgmfb31k0576nj8i0yg6xfj9y2a0a6akc5", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "XVector"] + "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "XVector", "rtracklayer"] }, "GenomicFiles": { "name": "GenomicFiles", "version": "1.40.0", "sha256": "1b0n5aqvg6jb6rpikjzxndmcjxp31h6vhr1magzalqg7jmlvcv6i", - "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MatrixGenerics", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MatrixGenerics", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "rtracklayer"] }, "GenomicInteractionNodes": { "name": "GenomicInteractionNodes", "version": "1.8.0", "sha256": "1xkrmpsgqqsd470f4dgnbs5zb62qfrbpmzw97jsarri57pmqxy7a", - "depends": ["AnnotationDbi", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GO_db", "graph", "IRanges", "RBGL", "S4Vectors"] + "depends": ["AnnotationDbi", "GO_db", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RBGL", "S4Vectors", "graph"] }, "GenomicInteractions": { "name": "GenomicInteractions", "version": "1.38.0", "sha256": "16aaaa4nr1y5ng1hzw87q950clid28iqf4gkypcpihg3cz69axxg", - "depends": ["Biobase", "BiocGenerics", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "Gviz", "igraph", "InteractionSet", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "stringr"] + "depends": ["Biobase", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "InteractionSet", "Rsamtools", "S4Vectors", "data_table", "dplyr", "ggplot2", "gridExtra", "igraph", "rtracklayer", "stringr"] }, "GenomicOZone": { "name": "GenomicOZone", "version": "1.18.0", "sha256": "0i130gwf2ifgm635dhshfmnj97jqlz5nkwb98jbgz4ciq7mpdwv8", - "depends": ["biomaRt", "Ckmeans_1d_dp", "GenomeInfoDb", "GenomicRanges", "ggbio", "ggplot2", "gridExtra", "IRanges", "lsr", "plyr", "Rdpack", "S4Vectors"] + "depends": ["Ckmeans_1d_dp", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rdpack", "S4Vectors", "biomaRt", "ggbio", "ggplot2", "gridExtra", "lsr", "plyr"] }, "GenomicPlot": { "name": "GenomicPlot", - "version": "1.2.2", - "sha256": "0s5slbkr6cpy5asl8v1fr914zgqg1q6gcwwf9nb0r8qh469c54pd", - "depends": ["BiocGenerics", "circlize", "ComplexHeatmap", "cowplot", "dplyr", "edgeR", "genomation", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggplotify", "ggpubr", "ggsci", "ggsignif", "IRanges", "plyranges", "RCAS", "Rsamtools", "rtracklayer", "scales", "tidyr", "txdbmaker", "VennDiagram", "viridis"] + "version": "1.2.4", + "sha256": "1r1fh28bmmpf7s7sm58xyxs7551d54avjafj2nq5d8gpfbwhy2js", + "depends": ["BiocGenerics", "ComplexHeatmap", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RCAS", "Rsamtools", "VennDiagram", "circlize", "cowplot", "dplyr", "edgeR", "genomation", "ggplot2", "ggplotify", "ggpubr", "ggsci", "ggsignif", "plyranges", "rtracklayer", "scales", "tidyr", "txdbmaker", "viridis"] }, "GenomicRanges": { "name": "GenomicRanges", @@ -2587,79 +2599,79 @@ "name": "GenomicScores", "version": "2.16.0", "sha256": "11sabicr2jm1cc9rdjr6vjqhf0gd9d7k04qlfhcdssvh02f957ia", - "depends": ["AnnotationHub", "Biobase", "BiocFileCache", "BiocGenerics", "BiocManager", "Biostrings", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "httr", "IRanges", "rhdf5", "S4Vectors", "XML"] + "depends": ["AnnotationHub", "Biobase", "BiocFileCache", "BiocGenerics", "BiocManager", "Biostrings", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "S4Vectors", "XML", "httr", "rhdf5"] }, "GenomicSuperSignature": { "name": "GenomicSuperSignature", "version": "1.12.0", "sha256": "0prplxp7l7hx6697a18kk2s5iyrdgpqwfh79n9lnala2h2q3vhs0", - "depends": ["Biobase", "BiocFileCache", "ComplexHeatmap", "dplyr", "flextable", "ggplot2", "ggpubr", "irlba", "plotly", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocFileCache", "ComplexHeatmap", "S4Vectors", "SummarizedExperiment", "dplyr", "flextable", "ggplot2", "ggpubr", "irlba", "plotly"] }, "GenomicTuples": { "name": "GenomicTuples", "version": "1.38.0", "sha256": "04inysn0aa2fmbnb01zk300x8qgz8bk4rhw68ka6ni7cbrn88ysa", - "depends": ["BiocGenerics", "data_table", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "S4Vectors", "data_table"] }, "GeoDiff": { "name": "GeoDiff", "version": "1.10.0", "sha256": "17mm22cgq0259r15d49gv07igr8dpasylrnhsycx6mjg75zvz6jp", - "depends": ["Biobase", "GeomxTools", "lme4", "Matrix", "NanoStringNCTools", "plyr", "Rcpp", "RcppArmadillo", "robust", "roptim", "testthat", "withr"] + "depends": ["Biobase", "GeomxTools", "Matrix", "NanoStringNCTools", "Rcpp", "RcppArmadillo", "lme4", "plyr", "robust", "roptim", "testthat", "withr"] }, "GeoTcgaData": { "name": "GeoTcgaData", "version": "2.4.0", "sha256": "0hhhwnswjglxws75iqcn2sa66z9mr65n23p5i7c615n5qzrvcmw3", - "depends": ["cqn", "data_table", "plyr", "SummarizedExperiment", "topconfects"] + "depends": ["SummarizedExperiment", "cqn", "data_table", "plyr", "topconfects"] }, "GeomxTools": { "name": "GeomxTools", "version": "3.8.0", "sha256": "093900a8himdfh752ah2wk9x5iczri0f3djsfi2mwzkb7frxpj0c", - "depends": ["Biobase", "BiocGenerics", "data_table", "dplyr", "EnvStats", "GGally", "ggplot2", "lmerTest", "NanoStringNCTools", "readxl", "reshape2", "rjson", "rlang", "S4Vectors", "SeuratObject", "stringr"] + "depends": ["Biobase", "BiocGenerics", "EnvStats", "GGally", "NanoStringNCTools", "S4Vectors", "SeuratObject", "data_table", "dplyr", "ggplot2", "lmerTest", "readxl", "reshape2", "rjson", "rlang", "stringr"] }, "GladiaTOX": { "name": "GladiaTOX", "version": "1.20.0", "sha256": "0krgsih0w60sl0gw1rpff89piv3mf1sk86hmlqjxl6idag8n2jil", - "depends": ["brew", "data_table", "DBI", "ggplot2", "ggrepel", "numDeriv", "RColorBrewer", "RCurl", "RJSONIO", "RMariaDB", "RSQLite", "stringr", "tidyr", "XML", "xtable"] + "depends": ["DBI", "RColorBrewer", "RCurl", "RJSONIO", "RMariaDB", "RSQLite", "XML", "brew", "data_table", "ggplot2", "ggrepel", "numDeriv", "stringr", "tidyr", "xtable"] }, "Glimma": { "name": "Glimma", "version": "2.14.0", "sha256": "1d7rq3irp3n0fabfgjs2x2c9lscz70a38qf3wbxvi417qn7fpyla", - "depends": ["DESeq2", "edgeR", "htmlwidgets", "jsonlite", "limma", "S4Vectors", "SummarizedExperiment"] + "depends": ["DESeq2", "S4Vectors", "SummarizedExperiment", "edgeR", "htmlwidgets", "jsonlite", "limma"] }, "GloScope": { "name": "GloScope", - "version": "1.2.0", - "sha256": "0gdr5ws5p1xj4ip9xk10igrlwdr10x11j0wsfkr0f0y6352f2gm6", - "depends": ["BiocParallel", "FNN", "ggplot2", "MASS", "mclust", "mvnfast", "RANN", "rlang", "SingleCellExperiment"] + "version": "1.2.1", + "sha256": "02in9nq84gap80nyawvm434aqcc09idkfd3ihgnd3v8g6vx9sv3a", + "depends": ["BiocParallel", "FNN", "MASS", "RANN", "SingleCellExperiment", "ggplot2", "mclust", "mvnfast", "rlang"] }, "GlobalAncova": { "name": "GlobalAncova", "version": "4.22.0", "sha256": "0z71a5h4y740k0hx84aavfxl1kpshm4gqs7mh6zf895i2r761bqh", - "depends": ["annotate", "AnnotationDbi", "Biobase", "corpcor", "dendextend", "globaltest", "GSEABase", "VGAM"] + "depends": ["AnnotationDbi", "Biobase", "GSEABase", "VGAM", "annotate", "corpcor", "dendextend", "globaltest"] }, "GmicR": { "name": "GmicR", "version": "1.18.0", "sha256": "19zn4n21rprfhx8zmpcl7n5jyfhdz450b9dgw1ayrnnr0w4bf67h", - "depends": ["AnnotationDbi", "ape", "bnlearn", "Category", "data_table", "doParallel", "DT", "foreach", "GOstats", "gRain", "gRbase", "GSEABase", "org_Hs_eg_db", "org_Mm_eg_db", "reshape2", "shiny", "WGCNA"] + "depends": ["AnnotationDbi", "Category", "DT", "GOstats", "GSEABase", "WGCNA", "ape", "bnlearn", "data_table", "doParallel", "foreach", "gRain", "gRbase", "org_Hs_eg_db", "org_Mm_eg_db", "reshape2", "shiny"] }, "GrafGen": { "name": "GrafGen", "version": "1.0.0", "sha256": "180ag0wvbhmd1vsza5lfphdx8d2phcfa4lzisi5fbk6n4195g830", - "depends": ["cowplot", "dplyr", "GenomicRanges", "ggplot2", "ggpubr", "plotly", "RColorBrewer", "rlang", "scales", "shiny", "stringr", "zlibbioc"] + "depends": ["GenomicRanges", "RColorBrewer", "cowplot", "dplyr", "ggplot2", "ggpubr", "plotly", "rlang", "scales", "shiny", "stringr", "zlibbioc"] }, "GraphAT": { "name": "GraphAT", "version": "1.76.0", "sha256": "0mxsgd08qd7fb28gbbgx21vvd5sf3nn0ymrlshsdpsdya5vmmv3d", - "depends": ["graph", "MCMCpack"] + "depends": ["MCMCpack", "graph"] }, "GraphAlignment": { "name": "GraphAlignment", @@ -2671,31 +2683,31 @@ "name": "GraphPAC", "version": "1.46.0", "sha256": "0dy3yn6vhgbvn0ygrkznhaylhaslyrnmlw5kmq0inqvl9y2yl277", - "depends": ["igraph", "iPAC", "RMallow", "TSP"] + "depends": ["RMallow", "TSP", "iPAC", "igraph"] }, "GreyListChIP": { "name": "GreyListChIP", "version": "1.36.0", "sha256": "0dj3pcycnjll8z1r61l6gnjvq74w2l0glrx6hqwcqvk5j7ixcdz7", - "depends": ["BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "MASS", "Rsamtools", "rtracklayer", "SummarizedExperiment"] + "depends": ["BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "MASS", "Rsamtools", "SummarizedExperiment", "rtracklayer"] }, "Guitar": { "name": "Guitar", "version": "2.20.0", "sha256": "1agr3n787dqly09wy274v9dg52vdb0n0z3gdh2zsbklkbmayqxqy", - "depends": ["AnnotationDbi", "dplyr", "GenomicFeatures", "GenomicRanges", "ggplot2", "knitr", "magrittr", "rtracklayer"] + "depends": ["AnnotationDbi", "GenomicFeatures", "GenomicRanges", "dplyr", "ggplot2", "knitr", "magrittr", "rtracklayer"] }, "Gviz": { "name": "Gviz", "version": "1.48.0", "sha256": "07w37kq6zx99z980if4brwmw25vjgvxd8xj3l1893idbdf70py0p", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "biomaRt", "Biostrings", "biovizBase", "BSgenome", "digest", "ensembldb", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "lattice", "latticeExtra", "matrixStats", "RColorBrewer", "Rsamtools", "rtracklayer", "S4Vectors", "XVector"] + "depends": ["AnnotationDbi", "BSgenome", "Biobase", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "XVector", "biomaRt", "biovizBase", "digest", "ensembldb", "lattice", "latticeExtra", "matrixStats", "rtracklayer"] }, "HDF5Array": { "name": "HDF5Array", - "version": "1.32.0", - "sha256": "0j8rz99qw1rism3f5cv7rksccijmnchrkw7s9shxk0528f6dj6p1", - "depends": ["BiocGenerics", "DelayedArray", "IRanges", "Matrix", "rhdf5", "rhdf5filters", "Rhdf5lib", "S4Arrays", "S4Vectors"] + "version": "1.32.1", + "sha256": "1cfm15zwfp1gxgrkknyvdaqb5fm27s2nyjrhxwkrbn32yfdrgdnz", + "depends": ["BiocGenerics", "DelayedArray", "IRanges", "Matrix", "Rhdf5lib", "S4Arrays", "S4Vectors", "rhdf5", "rhdf5filters"] }, "HDTD": { "name": "HDTD", @@ -2719,13 +2731,13 @@ "name": "HERON", "version": "1.2.0", "sha256": "0z8bsvsj1xa4r93y244381yckqk4mc39ij3pabcbn2mgbihcs94d", - "depends": ["cluster", "data_table", "GenomicRanges", "harmonicmeanp", "IRanges", "limma", "Matrix", "matrixStats", "metap", "S4Vectors", "spdep", "SummarizedExperiment"] + "depends": ["GenomicRanges", "IRanges", "Matrix", "S4Vectors", "SummarizedExperiment", "cluster", "data_table", "harmonicmeanp", "limma", "matrixStats", "metap", "spdep"] }, "HGC": { "name": "HGC", "version": "1.12.0", "sha256": "10g4lmhs8brfrci6n28iarzwm4dlvsbysssv2n25l1rp8wnl2sip", - "depends": ["ape", "dendextend", "dplyr", "ggplot2", "Matrix", "mclust", "patchwork", "RANN", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "RANN", "Rcpp", "RcppEigen", "ape", "dendextend", "dplyr", "ggplot2", "mclust", "patchwork"] }, "HIBAG": { "name": "HIBAG", @@ -2737,7 +2749,7 @@ "name": "HIPPO", "version": "1.16.0", "sha256": "1fp2jxi5xlf3archv3z8gnrc3rsh12vkprk6xhdffw9n2mqap56c", - "depends": ["dplyr", "ggplot2", "ggrepel", "gridExtra", "irlba", "magrittr", "Matrix", "reshape2", "rlang", "Rtsne", "SingleCellExperiment", "umap"] + "depends": ["Matrix", "Rtsne", "SingleCellExperiment", "dplyr", "ggplot2", "ggrepel", "gridExtra", "irlba", "magrittr", "reshape2", "rlang", "umap"] }, "HIREewas": { "name": "HIREewas", @@ -2761,7 +2773,7 @@ "name": "HPiP", "version": "1.10.0", "sha256": "1kjsa8q70zvmjqcvrpcijf7w6c5k21ysdd8pd8zsxwkvck174gih", - "depends": ["caret", "corrplot", "dplyr", "ggplot2", "httr", "igraph", "magrittr", "MCL", "pROC", "protr", "PRROC", "purrr", "readr", "stringr", "tibble", "tidyr"] + "depends": ["MCL", "PRROC", "caret", "corrplot", "dplyr", "ggplot2", "httr", "igraph", "magrittr", "pROC", "protr", "purrr", "readr", "stringr", "tibble", "tidyr"] }, "HTSFilter": { "name": "HTSFilter", @@ -2773,25 +2785,25 @@ "name": "HTSeqGenie", "version": "4.34.0", "sha256": "1np04hiijz9jdxvlg1mk74w19ma32qrdjb9bc5cscrs1lgw78idh", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "Cairo", "chipseq", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "gmapR", "hwriter", "IRanges", "pwalign", "Rsamtools", "rtracklayer", "S4Vectors", "ShortRead", "SummarizedExperiment", "VariantAnnotation", "VariantTools"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "Cairo", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "VariantAnnotation", "VariantTools", "chipseq", "gmapR", "hwriter", "pwalign", "rtracklayer"] }, "Harman": { "name": "Harman", "version": "1.32.0", "sha256": "1b6w8wrlsvxpzbsp4vkrpfvx4icbvncl11q4j773knz5q0q9l6q0", - "depends": ["Ckmeans_1d_dp", "matrixStats", "Rcpp"] + "depends": ["Ckmeans_1d_dp", "Rcpp", "matrixStats"] }, "HarmonizR": { "name": "HarmonizR", "version": "1.2.0", "sha256": "1bjyfxhlsslns7jiaaivld56w9j1gavdnrbciil6kiqs2q63fpj9", - "depends": ["doParallel", "foreach", "janitor", "limma", "plyr", "seriation", "SummarizedExperiment", "sva"] + "depends": ["SummarizedExperiment", "doParallel", "foreach", "janitor", "limma", "plyr", "seriation", "sva"] }, "Harshlight": { "name": "Harshlight", "version": "1.76.0", "sha256": "1nqi2ad9hnm6j8hn8f6xp9zav6rsa5wlzb2z5fjnm9q4xbjblnjl", - "depends": ["affy", "altcdfenvs", "Biobase"] + "depends": ["Biobase", "affy", "altcdfenvs"] }, "Heatplus": { "name": "Heatplus", @@ -2803,7 +2815,7 @@ "name": "HelloRanges", "version": "1.30.0", "sha256": "0idv6aravk0jj8p33kvc620p60ciyrkd293ba034g6j5921ym6gx", - "depends": ["BiocGenerics", "BiocIO", "Biostrings", "BSgenome", "docopt", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BSgenome", "BiocGenerics", "BiocIO", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "docopt", "rtracklayer"] }, "Herper": { "name": "Herper", @@ -2815,49 +2827,49 @@ "name": "HiCBricks", "version": "1.22.0", "sha256": "0hbmy7vhg63n6r2lv8gvrlsj4xgqbf8mvaci2i4kpc9327jny2nn", - "depends": ["BiocParallel", "curl", "data_table", "digest", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "jsonlite", "R_utils", "R6", "RColorBrewer", "readr", "reshape2", "rhdf5", "S4Vectors", "scales", "stringr", "tibble", "viridis"] + "depends": ["BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "R6", "RColorBrewer", "R_utils", "S4Vectors", "curl", "data_table", "digest", "ggplot2", "jsonlite", "readr", "reshape2", "rhdf5", "scales", "stringr", "tibble", "viridis"] }, "HiCDCPlus": { "name": "HiCDCPlus", "version": "1.12.0", "sha256": "0x95v5h1qjks87gmis7p0y4bmj7xalqbgny0qfkaw8s561fhx3j9", - "depends": ["bbmle", "Biostrings", "BSgenome", "data_table", "dplyr", "GenomeInfoDb", "GenomicInteractions", "GenomicRanges", "InteractionSet", "IRanges", "MASS", "pscl", "R_utils", "Rcpp", "rlang", "rtracklayer", "S4Vectors", "tibble", "tidyr"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicInteractions", "GenomicRanges", "IRanges", "InteractionSet", "MASS", "R_utils", "Rcpp", "S4Vectors", "bbmle", "data_table", "dplyr", "pscl", "rlang", "rtracklayer", "tibble", "tidyr"] }, "HiCDOC": { "name": "HiCDOC", "version": "1.6.0", "sha256": "1p8n3yljzlk8ic47101nw8d6dmxgadacgfh6pknkpxgk6vlcq6kh", - "depends": ["BiocGenerics", "BiocParallel", "cowplot", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "gtools", "InteractionSet", "multiHiCcompare", "pbapply", "Rcpp", "S4Vectors", "SummarizedExperiment", "zlibbioc"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "Rcpp", "S4Vectors", "SummarizedExperiment", "cowplot", "data_table", "ggplot2", "gridExtra", "gtools", "multiHiCcompare", "pbapply", "zlibbioc"] }, "HiCExperiment": { "name": "HiCExperiment", "version": "1.4.0", "sha256": "0wz08jwljv8zc658xl55rwwsfvy3lc3qg9dw7d41cw37wh40dkw1", - "depends": ["BiocGenerics", "BiocIO", "BiocParallel", "dplyr", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "IRanges", "Matrix", "rhdf5", "S4Vectors", "strawr", "vroom"] + "depends": ["BiocGenerics", "BiocIO", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "Matrix", "S4Vectors", "dplyr", "rhdf5", "strawr", "vroom"] }, "HiCcompare": { "name": "HiCcompare", "version": "1.26.0", "sha256": "1rpdqij0lvs9cyl1z5lgw91332km1nb8053kk432bais9382jkxc", - "depends": ["BiocParallel", "data_table", "dplyr", "GenomicRanges", "ggplot2", "gridExtra", "gtools", "InteractionSet", "IRanges", "KernSmooth", "mgcv", "pheatmap", "rhdf5", "S4Vectors"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "InteractionSet", "KernSmooth", "S4Vectors", "data_table", "dplyr", "ggplot2", "gridExtra", "gtools", "mgcv", "pheatmap", "rhdf5"] }, "HiContacts": { "name": "HiContacts", "version": "1.6.0", "sha256": "18rfv9z03dqdqifrxqv1l3m9s8nykygd9y6d7pya2sdfx8f0hgza", - "depends": ["BiocGenerics", "BiocIO", "BiocParallel", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggrastr", "HiCExperiment", "InteractionSet", "IRanges", "Matrix", "readr", "RSpectra", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["BiocGenerics", "BiocIO", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "HiCExperiment", "IRanges", "InteractionSet", "Matrix", "RSpectra", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "ggrastr", "readr", "scales", "stringr", "tibble", "tidyr"] }, "HiCool": { "name": "HiCool", "version": "1.4.0", "sha256": "06b26szb23mngcfx5xwdw6kz10gqjs69py0iz5piia4a7vppk8zk", - "depends": ["basilisk", "BiocIO", "dplyr", "GenomicRanges", "HiCExperiment", "InteractionSet", "IRanges", "plotly", "reticulate", "rmarkdown", "rmdformats", "S4Vectors", "sessioninfo", "stringr", "vroom"] + "depends": ["BiocIO", "GenomicRanges", "HiCExperiment", "IRanges", "InteractionSet", "S4Vectors", "basilisk", "dplyr", "plotly", "reticulate", "rmarkdown", "rmdformats", "sessioninfo", "stringr", "vroom"] }, "HiLDA": { "name": "HiLDA", "version": "1.18.0", "sha256": "1v5gvb84q09l8i7f1d4q7zpyxlzaq5bqifia706d60700wvfan29", - "depends": ["abind", "BiocGenerics", "Biostrings", "BSgenome_Hsapiens_UCSC_hg19", "cowplot", "forcats", "GenomicFeatures", "GenomicRanges", "ggplot2", "R2jags", "Rcpp", "S4Vectors", "stringr", "tidyr", "TxDb_Hsapiens_UCSC_hg19_knownGene", "XVector"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "BiocGenerics", "Biostrings", "GenomicFeatures", "GenomicRanges", "R2jags", "Rcpp", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "XVector", "abind", "cowplot", "forcats", "ggplot2", "stringr", "tidyr"] }, "HiTC": { "name": "HiTC", @@ -2869,13 +2881,13 @@ "name": "HicAggR", "version": "1.0.2", "sha256": "1lpf7m3rsm3ng0i6gqyl6l3jvawnl8wcfjl0gkxz604bwszjvhb3", - "depends": ["BiocGenerics", "BiocParallel", "checkmate", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "InteractionSet", "IRanges", "Matrix", "purrr", "reshape", "rhdf5", "rlang", "rtracklayer", "S4Vectors", "strawr", "stringr", "tibble", "tidyr", "withr"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "Matrix", "S4Vectors", "checkmate", "data_table", "dplyr", "ggplot2", "gridExtra", "purrr", "reshape", "rhdf5", "rlang", "rtracklayer", "strawr", "stringr", "tibble", "tidyr", "withr"] }, "HilbertCurve": { "name": "HilbertCurve", "version": "1.34.0", "sha256": "0kka2haa84kv2xwqny0ii0mfq0gjdh4vv1zkjk0lbqszqk1h6hab", - "depends": ["circlize", "GenomicRanges", "HilbertVis", "IRanges", "png", "polylabelr"] + "depends": ["GenomicRanges", "HilbertVis", "IRanges", "circlize", "png", "polylabelr"] }, "HilbertVis": { "name": "HilbertVis", @@ -2893,31 +2905,31 @@ "name": "HubPub", "version": "1.12.0", "sha256": "02xqw3xkhzk2fxx4l1h5gl5v0diamssr1dw9x871glxjl4kw07xm", - "depends": ["available", "aws_s3", "BiocManager", "biocthis", "dplyr", "fs", "usethis"] + "depends": ["BiocManager", "available", "aws_s3", "biocthis", "dplyr", "fs", "usethis"] }, "HumanTranscriptomeCompendium": { "name": "HumanTranscriptomeCompendium", "version": "1.20.0", "sha256": "1y46zsl08k6sdih8psar85fyc5dfk2vraxmfry70zx57vbjbin92", - "depends": ["BiocManager", "S4Vectors", "shiny", "ssrch", "SummarizedExperiment"] + "depends": ["BiocManager", "S4Vectors", "SummarizedExperiment", "shiny", "ssrch"] }, "HybridExpress": { "name": "HybridExpress", "version": "1.0.0", "sha256": "1cpvw6ycbh60wn39ws0l6hrgy9x97glb56f87sn2qg9li6hxjshh", - "depends": ["BiocParallel", "ComplexHeatmap", "DESeq2", "ggplot2", "patchwork", "RColorBrewer", "rlang", "SummarizedExperiment"] + "depends": ["BiocParallel", "ComplexHeatmap", "DESeq2", "RColorBrewer", "SummarizedExperiment", "ggplot2", "patchwork", "rlang"] }, "HybridMTest": { "name": "HybridMTest", "version": "1.48.0", "sha256": "0fh0v29fpwzramqnbxmzpmgiziwswdx38734g2lx303b0blkbv7j", - "depends": ["Biobase", "fdrtool", "MASS", "survival"] + "depends": ["Biobase", "MASS", "fdrtool", "survival"] }, "IFAA": { "name": "IFAA", "version": "1.6.0", "sha256": "1y2vsz14d5a22m21n7zmfm64ffvh8hq0hkwnr44ifysy4zfmjg0x", - "depends": ["DescTools", "doParallel", "doRNG", "foreach", "glmnet", "HDCI", "mathjaxr", "Matrix", "MatrixExtra", "parallelly", "S4Vectors", "stringr", "SummarizedExperiment"] + "depends": ["DescTools", "HDCI", "Matrix", "MatrixExtra", "S4Vectors", "SummarizedExperiment", "doParallel", "doRNG", "foreach", "glmnet", "mathjaxr", "parallelly", "stringr"] }, "IHW": { "name": "IHW", @@ -2929,19 +2941,19 @@ "name": "ILoReg", "version": "1.14.0", "sha256": "1zw6m2a5jr77mbjbzc966v98pdfw2s0sg1sqssdf7qsb0izj10b0", - "depends": ["aricode", "cluster", "cowplot", "dendextend", "DescTools", "doRNG", "doSNOW", "dplyr", "fastcluster", "foreach", "ggplot2", "LiblineaR", "Matrix", "parallelDist", "pheatmap", "plyr", "reshape2", "RSpectra", "Rtsne", "S4Vectors", "scales", "SingleCellExperiment", "SparseM", "SummarizedExperiment", "umap"] + "depends": ["DescTools", "LiblineaR", "Matrix", "RSpectra", "Rtsne", "S4Vectors", "SingleCellExperiment", "SparseM", "SummarizedExperiment", "aricode", "cluster", "cowplot", "dendextend", "doRNG", "doSNOW", "dplyr", "fastcluster", "foreach", "ggplot2", "parallelDist", "pheatmap", "plyr", "reshape2", "scales", "umap"] }, "IMAS": { "name": "IMAS", "version": "1.28.0", "sha256": "1n55qs4v5x7clpbhlrby5dcz9xldqrsfp6g4k6g0s1g0lk2rplqm", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "doParallel", "foreach", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggfortify", "ggplot2", "gridExtra", "IRanges", "IVAS", "lattice", "lme4", "Matrix", "Rsamtools", "S4Vectors", "survival"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "IVAS", "Matrix", "Rsamtools", "S4Vectors", "doParallel", "foreach", "ggfortify", "ggplot2", "gridExtra", "lattice", "lme4", "survival"] }, "IMMAN": { "name": "IMMAN", "version": "1.24.0", "sha256": "1yn0p53ar9b9g5d2gfyd70cp7vm69fsgn8av9lvc6qyac18w9y5j", - "depends": ["igraph", "pwalign", "seqinr", "STRINGdb"] + "depends": ["STRINGdb", "igraph", "pwalign", "seqinr"] }, "IMPCdata": { "name": "IMPCdata", @@ -2965,19 +2977,19 @@ "name": "INSPEcT", "version": "1.34.0", "sha256": "0147ss218d3dnqbdgfwsg24an63qln8l5kkv0y4hm56bncdrm1i0", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DESeq2", "deSolve", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "KernSmooth", "plgem", "pROC", "readxl", "rootSolve", "Rsamtools", "rtracklayer", "S4Vectors", "shiny", "SummarizedExperiment", "TxDb_Mmusculus_UCSC_mm9_knownGene"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "KernSmooth", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TxDb_Mmusculus_UCSC_mm9_knownGene", "deSolve", "pROC", "plgem", "readxl", "rootSolve", "rtracklayer", "shiny"] }, "INTACT": { "name": "INTACT", "version": "1.4.0", "sha256": "1r1v8cvms0dyjf0f5f9v6qp7hz0rfb2yfbckvvrkq26yjwfbmlaa", - "depends": ["bdsmatrix", "numDeriv", "SQUAREM", "tidyr"] + "depends": ["SQUAREM", "bdsmatrix", "numDeriv", "tidyr"] }, "IONiseR": { "name": "IONiseR", "version": "2.28.0", "sha256": "1ihski4akl70v6kq03di6w1pz63dx6rxgmyjkm0dv0nhgkmrza22", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "bit64", "dplyr", "ggplot2", "magrittr", "rhdf5", "ShortRead", "stringr", "tibble", "tidyr", "XVector"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "ShortRead", "XVector", "bit64", "dplyr", "ggplot2", "magrittr", "rhdf5", "stringr", "tibble", "tidyr"] }, "IPO": { "name": "IPO", @@ -2987,21 +2999,21 @@ }, "IRanges": { "name": "IRanges", - "version": "2.38.0", - "sha256": "047688hrxyg2hxd1wbywxqnvxk1622xlldzana9g5hhxg9lldrk2", + "version": "2.38.1", + "sha256": "07q9j00rvgdbv582p01nxc99j0gfx4fsarpl1w1fjx5nb8y86k4v", "depends": ["BiocGenerics", "S4Vectors"] }, "ISAnalytics": { "name": "ISAnalytics", "version": "1.14.0", "sha256": "05khils483a1d64ikg4j5vl3rcwsjgik04b75a6rr3crkdba7fl4", - "depends": ["bslib", "datamods", "dplyr", "DT", "forcats", "fs", "ggplot2", "ggrepel", "glue", "lifecycle", "lubridate", "purrr", "readr", "readxl", "rlang", "shiny", "shinyWidgets", "stringr", "tibble", "tidyr"] + "depends": ["DT", "bslib", "datamods", "dplyr", "forcats", "fs", "ggplot2", "ggrepel", "glue", "lifecycle", "lubridate", "purrr", "readr", "readxl", "rlang", "shiny", "shinyWidgets", "stringr", "tibble", "tidyr"] }, "ISLET": { "name": "ISLET", "version": "1.6.0", "sha256": "0vhpxr0civdhcxiy39aycir8a68vgrydv3nx1p9rn4hhpw7dq7gi", - "depends": ["abind", "BiocGenerics", "BiocParallel", "lme4", "Matrix", "nnls", "purrr", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "Matrix", "SummarizedExperiment", "abind", "lme4", "nnls", "purrr"] }, "ISoLDE": { "name": "ISoLDE", @@ -3013,19 +3025,19 @@ "name": "ITALICS", "version": "2.64.0", "sha256": "06h6iqrqzlcj4hyhj1ikl9isr3ls1pph49v5n7cp87czinr0nd3s", - "depends": ["affxparser", "DBI", "GLAD", "ITALICSData", "oligo", "oligoClasses", "pd_mapping50k_xba240"] + "depends": ["DBI", "GLAD", "ITALICSData", "affxparser", "oligo", "oligoClasses", "pd_mapping50k_xba240"] }, "IVAS": { "name": "IVAS", "version": "2.24.0", "sha256": "15l0qga9a4q79y1r3pwcv3c0m0qpyjay3fvv7b4zwx7hvmkjfy1b", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "doParallel", "foreach", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggfortify", "ggplot2", "IRanges", "lme4", "Matrix", "S4Vectors"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "S4Vectors", "doParallel", "foreach", "ggfortify", "ggplot2", "lme4"] }, "IWTomics": { "name": "IWTomics", "version": "1.28.0", "sha256": "0ksmpa6f5zlgdhma1vxsfd64g7jhisffg5sbnz2xhf7faz14gc08", - "depends": ["fda", "GenomicRanges", "gtable", "IRanges", "KernSmooth", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "KernSmooth", "S4Vectors", "fda", "gtable"] }, "Icens": { "name": "Icens", @@ -3043,19 +3055,19 @@ "name": "IgGeneUsage", "version": "1.18.0", "sha256": "0b2bndc36yd0a4yi2z3870g1b9c1ddpwp44gl42ysk29qwis2yi6", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "StanHeaders", "SummarizedExperiment", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "SummarizedExperiment", "reshape2", "rstan", "rstantools", "tidyr"] }, "InPAS": { "name": "InPAS", "version": "2.12.0", "sha256": "05hzd8rixqz5d86d4gv7wh68kfbiynbp2xij9r2nj0h90av0h95b", - "depends": ["AnnotationDbi", "batchtools", "Biobase", "Biostrings", "BSgenome", "cleanUpdTSeq", "depmixS4", "dplyr", "flock", "future", "future_apply", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "limma", "magrittr", "parallelly", "plyranges", "preprocessCore", "readr", "reshape2", "RSQLite", "S4Vectors"] + "depends": ["AnnotationDbi", "BSgenome", "Biobase", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "batchtools", "cleanUpdTSeq", "depmixS4", "dplyr", "flock", "future", "future_apply", "ggplot2", "limma", "magrittr", "parallelly", "plyranges", "preprocessCore", "readr", "reshape2"] }, "InTAD": { "name": "InTAD", "version": "1.24.0", "sha256": "16npavms8qxccldpik27qbsv3w0drcjr132nz2ky2cvi01bcp4l2", - "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "ggplot2", "ggpubr", "IRanges", "mclust", "MultiAssayExperiment", "qvalue", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "ggplot2", "ggpubr", "mclust", "qvalue", "rtracklayer"] }, "Informeasure": { "name": "Informeasure", @@ -3067,19 +3079,19 @@ "name": "IntEREst", "version": "1.28.0", "sha256": "0i6q422vhf94ka0v69hs5irg506wb467rwnnn12xvsfyq54ak4dm", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "DBI", "DESeq2", "DEXSeq", "edgeR", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "RMySQL", "Rsamtools", "S4Vectors", "seqinr", "seqLogo", "SummarizedExperiment", "txdbmaker"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "DBI", "DESeq2", "DEXSeq", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "RMySQL", "Rsamtools", "S4Vectors", "SummarizedExperiment", "edgeR", "seqLogo", "seqinr", "txdbmaker"] }, "InterCellar": { "name": "InterCellar", "version": "2.10.0", "sha256": "020z08v199psgcl4z3kbwl1zgp10iwn5n60c4bq555fz6nbjb56n", - "depends": ["biomaRt", "circlize", "colorspace", "colourpicker", "ComplexHeatmap", "config", "data_table", "dendextend", "dplyr", "DT", "factoextra", "fmsb", "fs", "ggplot2", "golem", "htmltools", "htmlwidgets", "igraph", "plotly", "plyr", "readxl", "rlang", "scales", "shiny", "shinyalert", "shinycssloaders", "shinydashboard", "shinyFeedback", "shinyFiles", "signal", "tibble", "tidyr", "umap", "visNetwork", "wordcloud2"] + "depends": ["ComplexHeatmap", "DT", "biomaRt", "circlize", "colorspace", "colourpicker", "config", "data_table", "dendextend", "dplyr", "factoextra", "fmsb", "fs", "ggplot2", "golem", "htmltools", "htmlwidgets", "igraph", "plotly", "plyr", "readxl", "rlang", "scales", "shiny", "shinyFeedback", "shinyFiles", "shinyalert", "shinycssloaders", "shinydashboard", "signal", "tibble", "tidyr", "umap", "visNetwork", "wordcloud2"] }, "InterMineR": { "name": "InterMineR", "version": "1.26.0", "sha256": "0isw4rg89139xmrcfb9r7jc3z8jj1my4radhinah0vad2cwb36l0", - "depends": ["Biostrings", "GenomicRanges", "httr", "igraph", "IRanges", "RCurl", "RJSONIO", "S4Vectors", "sqldf", "SummarizedExperiment", "XML", "xml2"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "RCurl", "RJSONIO", "S4Vectors", "SummarizedExperiment", "XML", "httr", "igraph", "sqldf", "xml2"] }, "InteractionSet": { "name": "InteractionSet", @@ -3091,7 +3103,7 @@ "name": "InteractiveComplexHeatmap", "version": "1.12.0", "sha256": "0sfhr3f7fdw9zgw2wn7dhk1zwmhn3k3iy8xa0j9dv7bpa2mcvw1b", - "depends": ["clisymbols", "ComplexHeatmap", "digest", "fontawesome", "GetoptLong", "htmltools", "IRanges", "jsonlite", "kableExtra", "RColorBrewer", "S4Vectors", "shiny", "svglite"] + "depends": ["ComplexHeatmap", "GetoptLong", "IRanges", "RColorBrewer", "S4Vectors", "clisymbols", "digest", "fontawesome", "htmltools", "jsonlite", "kableExtra", "shiny", "svglite"] }, "IntramiRExploreR": { "name": "IntramiRExploreR", @@ -3101,15 +3113,15 @@ }, "IsoBayes": { "name": "IsoBayes", - "version": "1.2.0", - "sha256": "19vga38f9srbsb6vglb0ni33cfrzrn5z94d0v4apnki4r6plp2k2", - "depends": ["data_table", "doParallel", "doRNG", "foreach", "ggplot2", "glue", "HDInterval", "iterators", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment"] + "version": "1.2.6", + "sha256": "146xkxzaxsaj6rdx15jrrm3k5n7k58x7jvx3cmyc03zvr25yssm7", + "depends": ["HDInterval", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "doParallel", "doRNG", "foreach", "ggplot2", "glue", "iterators"] }, "IsoCorrectoR": { "name": "IsoCorrectoR", "version": "1.22.0", "sha256": "19h5wndzj3sgvhb7blx07pjammh05kwp5vwjv0drvlj829pqhkia", - "depends": ["dplyr", "magrittr", "pracma", "quadprog", "readr", "readxl", "stringr", "tibble", "WriteXLS"] + "depends": ["WriteXLS", "dplyr", "magrittr", "pracma", "quadprog", "readr", "readxl", "stringr", "tibble"] }, "IsoCorrectoRGUI": { "name": "IsoCorrectoRGUI", @@ -3121,7 +3133,7 @@ "name": "IsoformSwitchAnalyzeR", "version": "2.4.0", "sha256": "0mmxyq1r4kq1igj108pr0r9215hwmyph5svx0djd460knak24y6z", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "DBI", "DEXSeq", "dplyr", "edgeR", "futile_logger", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "limma", "magrittr", "pfamAnalyzeR", "plyr", "pwalign", "RColorBrewer", "RCurl", "readr", "reshape2", "rtracklayer", "S4Vectors", "satuRn", "stringr", "SummarizedExperiment", "sva", "tibble", "tidyr", "tximeta", "tximport", "VennDiagram", "XVector"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DBI", "DEXSeq", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "RCurl", "S4Vectors", "SummarizedExperiment", "VennDiagram", "XVector", "dplyr", "edgeR", "futile_logger", "ggplot2", "gridExtra", "limma", "magrittr", "pfamAnalyzeR", "plyr", "pwalign", "readr", "reshape2", "rtracklayer", "satuRn", "stringr", "sva", "tibble", "tidyr", "tximeta", "tximport"] }, "KBoost": { "name": "KBoost", @@ -3137,21 +3149,21 @@ }, "KEGGREST": { "name": "KEGGREST", - "version": "1.44.0", - "sha256": "1xvi11ywr3vj2m8fpqblzg2pmj1vsc0dm8fgggv6w96l6x6sfyf0", + "version": "1.44.1", + "sha256": "09qdsdbz5ha3b2fafwv80n6pdajjgsc5w52n1dy6ds41vxgf0jis", "depends": ["Biostrings", "httr", "png"] }, "KEGGgraph": { "name": "KEGGgraph", "version": "1.64.0", "sha256": "0lffqbvwmfjbw5ymxr969znvb53hbqfgq1zwffsc768rv3h4c6p7", - "depends": ["graph", "RCurl", "Rgraphviz", "XML"] + "depends": ["RCurl", "Rgraphviz", "XML", "graph"] }, "KEGGlincs": { "name": "KEGGlincs", "version": "1.30.0", "sha256": "0jxa42ax4r991vc2cqjdzyfwknf5929xyvlpimra3fbpgpp8sjpg", - "depends": ["AnnotationDbi", "gtools", "hgu133a_db", "httr", "igraph", "KEGGgraph", "KEGGREST", "KOdata", "org_Hs_eg_db", "plyr", "RJSONIO", "XML"] + "depends": ["AnnotationDbi", "KEGGREST", "KEGGgraph", "KOdata", "RJSONIO", "XML", "gtools", "hgu133a_db", "httr", "igraph", "org_Hs_eg_db", "plyr"] }, "KinSwingR": { "name": "KinSwingR", @@ -3163,13 +3175,13 @@ "name": "KnowSeq", "version": "1.18.0", "sha256": "1iv6cghkq0qi0d2fsj9x74jzvf1zrrknc3kx1b1xpa7lc0x11ym4", - "depends": ["caret", "cqn", "e1071", "edgeR", "ggplot2", "gridExtra", "Hmisc", "httr", "jsonlite", "kernlab", "limma", "praznik", "R_utils", "randomForest", "reshape2", "rlist", "rmarkdown", "stringr", "sva", "XML"] + "depends": ["Hmisc", "R_utils", "XML", "caret", "cqn", "e1071", "edgeR", "ggplot2", "gridExtra", "httr", "jsonlite", "kernlab", "limma", "praznik", "randomForest", "reshape2", "rlist", "rmarkdown", "stringr", "sva"] }, "LACE": { "name": "LACE", "version": "2.8.0", "sha256": "07izkiljmq0rbrijsgv45qvpp4zmaw78qqavzbvaw729pl172haz", - "depends": ["biomaRt", "bsplus", "callr", "configr", "curl", "data_table", "data_tree", "doParallel", "dplyr", "DT", "forcats", "foreach", "fs", "ggplot2", "htmltools", "htmlwidgets", "igraph", "jsonlite", "logr", "Matrix", "purrr", "RColorBrewer", "readr", "Rfast", "shiny", "shinyBS", "shinydashboard", "shinyFiles", "shinyjs", "shinythemes", "shinyvalidate", "sortable", "stringi", "stringr", "SummarizedExperiment", "svglite", "tidyr"] + "depends": ["DT", "Matrix", "RColorBrewer", "Rfast", "SummarizedExperiment", "biomaRt", "bsplus", "callr", "configr", "curl", "data_table", "data_tree", "doParallel", "dplyr", "forcats", "foreach", "fs", "ggplot2", "htmltools", "htmlwidgets", "igraph", "jsonlite", "logr", "purrr", "readr", "shiny", "shinyBS", "shinyFiles", "shinydashboard", "shinyjs", "shinythemes", "shinyvalidate", "sortable", "stringi", "stringr", "svglite", "tidyr"] }, "LBE": { "name": "LBE", @@ -3193,7 +3205,7 @@ "name": "LOLA", "version": "1.34.0", "sha256": "1i5axxzdwl6j1cgxfdfnaisv6bj4qbrhic5ba2k3wbhkgr144xcc", - "depends": ["BiocGenerics", "data_table", "GenomicRanges", "IRanges", "reshape2", "S4Vectors"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "data_table", "reshape2"] }, "LPE": { "name": "LPE", @@ -3211,31 +3223,31 @@ "name": "LRcell", "version": "1.12.0", "sha256": "129wwaa6ppayyirlyra720a2yhabvihy11yfbr3yddnk7jzgzm8a", - "depends": ["AnnotationHub", "BiocParallel", "dplyr", "ExperimentHub", "ggplot2", "ggrepel", "magrittr"] + "depends": ["AnnotationHub", "BiocParallel", "ExperimentHub", "dplyr", "ggplot2", "ggrepel", "magrittr"] }, "LedPred": { "name": "LedPred", "version": "1.38.0", "sha256": "1ziw6ya46s55gynlrl8dh6p3n0l1m01b0q6b9y6fc13pknjjbarh", - "depends": ["akima", "e1071", "ggplot2", "irr", "jsonlite", "plot3D", "plyr", "RCurl", "ROCR", "testthat"] + "depends": ["RCurl", "ROCR", "akima", "e1071", "ggplot2", "irr", "jsonlite", "plot3D", "plyr", "testthat"] }, "LinTInd": { "name": "LinTInd", "version": "1.8.0", "sha256": "01ij93fylp7bch2rywz31bpbhdgi8cbsn8nngsp730pd3pyw8mpf", - "depends": ["ape", "BiocGenerics", "Biostrings", "cowplot", "data_tree", "dplyr", "ggnewscale", "ggplot2", "ggtree", "IRanges", "networkD3", "pheatmap", "purrr", "pwalign", "reshape2", "rlist", "S4Vectors", "stringdist", "stringr"] + "depends": ["BiocGenerics", "Biostrings", "IRanges", "S4Vectors", "ape", "cowplot", "data_tree", "dplyr", "ggnewscale", "ggplot2", "ggtree", "networkD3", "pheatmap", "purrr", "pwalign", "reshape2", "rlist", "stringdist", "stringr"] }, "LinkHD": { "name": "LinkHD", "version": "1.18.0", "sha256": "00vfzs3121l4bqy3mb4pblfjcna5zaa4iqrzrz9pfkwm2wcf2zis", - "depends": ["cluster", "data_table", "emmeans", "ggplot2", "ggpubr", "gridExtra", "MultiAssayExperiment", "reshape2", "rio", "scales", "vegan"] + "depends": ["MultiAssayExperiment", "cluster", "data_table", "emmeans", "ggplot2", "ggpubr", "gridExtra", "reshape2", "rio", "scales", "vegan"] }, "Linnorm": { "name": "Linnorm", "version": "2.28.0", "sha256": "1la6fwaap7957rrb4cs6w48kjz4hqrw3h39lpps419d4cbnsp5jz", - "depends": ["amap", "apcluster", "ellipse", "fastcluster", "fpc", "ggdendro", "ggplot2", "gmodels", "igraph", "limma", "MASS", "mclust", "Rcpp", "RcppArmadillo", "Rtsne", "statmod", "vegan", "zoo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rtsne", "amap", "apcluster", "ellipse", "fastcluster", "fpc", "ggdendro", "ggplot2", "gmodels", "igraph", "limma", "mclust", "statmod", "vegan", "zoo"] }, "LiquidAssociation": { "name": "LiquidAssociation", @@ -3247,25 +3259,25 @@ "name": "LoomExperiment", "version": "1.22.0", "sha256": "12xx78pbfdhh1iprm8vfbnwi3dm7slf47y5a6p78spnhsykb3ris", - "depends": ["BiocIO", "DelayedArray", "GenomicRanges", "HDF5Array", "Matrix", "rhdf5", "S4Vectors", "SingleCellExperiment", "stringr", "SummarizedExperiment"] + "depends": ["BiocIO", "DelayedArray", "GenomicRanges", "HDF5Array", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "rhdf5", "stringr"] }, "LymphoSeq": { "name": "LymphoSeq", "version": "1.32.0", "sha256": "0km3k6sbcb573mk0wb6hq1xqmbkksnvkv8mx5b9jqr4r840lh909", - "depends": ["Biostrings", "circlize", "data_table", "dplyr", "ggplot2", "ggtree", "ineq", "LymphoSeqDB", "msa", "phangorn", "plyr", "RColorBrewer", "reshape", "stringdist", "UpSetR", "VennDiagram"] + "depends": ["Biostrings", "LymphoSeqDB", "RColorBrewer", "UpSetR", "VennDiagram", "circlize", "data_table", "dplyr", "ggplot2", "ggtree", "ineq", "msa", "phangorn", "plyr", "reshape", "stringdist"] }, "M3C": { "name": "M3C", "version": "1.26.0", "sha256": "1h3zxb3m68lq37g25zqxpmk2c9yrdhydyhh7ad2d30hif73qiacm", - "depends": ["cluster", "corpcor", "doParallel", "doSNOW", "foreach", "ggplot2", "Matrix", "matrixcalc", "Rtsne", "umap"] + "depends": ["Matrix", "Rtsne", "cluster", "corpcor", "doParallel", "doSNOW", "foreach", "ggplot2", "matrixcalc", "umap"] }, "M3Drop": { "name": "M3Drop", "version": "1.30.0", "sha256": "1ksdr7p517sidp99kl4bjy88i18c7hxgd7zlrj4h0zrvy3fjh1r4", - "depends": ["bbmle", "gplots", "Hmisc", "irlba", "Matrix", "matrixStats", "numDeriv", "RColorBrewer", "reldist", "scater", "statmod"] + "depends": ["Hmisc", "Matrix", "RColorBrewer", "bbmle", "gplots", "irlba", "matrixStats", "numDeriv", "reldist", "scater", "statmod"] }, "MACSQuantifyR": { "name": "MACSQuantifyR", @@ -3277,37 +3289,37 @@ "name": "MACSr", "version": "1.12.0", "sha256": "04qra9rwj3f259k2f8h1v8g8cnkm2ryrr84rq6pmkr9ax0wbym63", - "depends": ["AnnotationHub", "basilisk", "ExperimentHub", "reticulate", "S4Vectors"] + "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "basilisk", "reticulate"] }, "MADSEQ": { "name": "MADSEQ", "version": "1.30.0", "sha256": "0b15wg8nsavl2994clrv72rl6qn5b8pbxk1wqwqcrdab832pd4m7", - "depends": ["Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "coda", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "preprocessCore", "rjags", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "vcfR", "VGAM", "zlibbioc"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VGAM", "VariantAnnotation", "coda", "preprocessCore", "rjags", "rtracklayer", "vcfR", "zlibbioc"] }, "MAGAR": { "name": "MAGAR", "version": "1.12.0", "sha256": "10ki05dffrc9b4ghwjlcc51m9zviyffsldwp5w6m740y9gd0hjcg", - "depends": ["argparse", "bigstatsr", "crlmm", "data_table", "doParallel", "ff", "HDF5Array", "igraph", "impute", "jsonlite", "plyr", "reshape2", "rjson", "RnBeads", "RnBeads_hg19", "RnBeads_hg38", "snpStats", "UpSetR"] + "depends": ["HDF5Array", "RnBeads", "RnBeads_hg19", "RnBeads_hg38", "UpSetR", "argparse", "bigstatsr", "crlmm", "data_table", "doParallel", "ff", "igraph", "impute", "jsonlite", "plyr", "reshape2", "rjson", "snpStats"] }, "MAGeCKFlute": { "name": "MAGeCKFlute", "version": "2.8.0", "sha256": "1fbwd1wi9z6fgq2whqazyqwm71j7h87dcv4vh3f23yzxm337qpiy", - "depends": ["Biobase", "clusterProfiler", "depmap", "DOSE", "enrichplot", "ggplot2", "ggrepel", "gridExtra", "msigdbr", "pathview", "reshape2"] + "depends": ["Biobase", "DOSE", "clusterProfiler", "depmap", "enrichplot", "ggplot2", "ggrepel", "gridExtra", "msigdbr", "pathview", "reshape2"] }, "MAI": { "name": "MAI", "version": "1.10.0", "sha256": "0fj5q9bbwazicncyxn7940jxkka1m76327cgwl3skj8a1xr6nlfq", - "depends": ["caret", "doParallel", "e1071", "foreach", "future", "future_apply", "missForest", "pcaMethods", "S4Vectors", "SummarizedExperiment", "tidyverse"] + "depends": ["S4Vectors", "SummarizedExperiment", "caret", "doParallel", "e1071", "foreach", "future", "future_apply", "missForest", "pcaMethods", "tidyverse"] }, "MAIT": { "name": "MAIT", "version": "1.38.0", "sha256": "0b33n6n3v88rad6ndpldsz3kb3l35fq7w6vqm5fzd9nxn9h5ayws", - "depends": ["agricolae", "CAMERA", "caret", "class", "e1071", "gplots", "MASS", "pls", "plsgenomics", "Rcpp", "xcms"] + "depends": ["CAMERA", "MASS", "Rcpp", "agricolae", "caret", "class", "e1071", "gplots", "pls", "plsgenomics", "xcms"] }, "MANOR": { "name": "MANOR", @@ -3319,13 +3331,13 @@ "name": "MAPFX", "version": "1.0.0", "sha256": "16iqj70hhsgvnlb8g9z42xplfdsryzlc9cq4ndky01izmqi0ybvx", - "depends": ["Biobase", "circlize", "ComplexHeatmap", "cowplot", "e1071", "flowCore", "ggplot2", "glmnetUtils", "gtools", "iCellR", "igraph", "pbapply", "RColorBrewer", "reshape2", "Rfast", "stringr", "uwot", "xgboost"] + "depends": ["Biobase", "ComplexHeatmap", "RColorBrewer", "Rfast", "circlize", "cowplot", "e1071", "flowCore", "ggplot2", "glmnetUtils", "gtools", "iCellR", "igraph", "pbapply", "reshape2", "stringr", "uwot", "xgboost"] }, "MAST": { "name": "MAST", "version": "1.30.0", "sha256": "1k8an0ifcgx54lqzpim3q37y4rhv57i94i46dlpmdyfghqqw0fny", - "depends": ["abind", "Biobase", "BiocGenerics", "data_table", "ggplot2", "Matrix", "plyr", "progress", "reshape2", "S4Vectors", "SingleCellExperiment", "stringr", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "abind", "data_table", "ggplot2", "plyr", "progress", "reshape2", "stringr"] }, "MBASED": { "name": "MBASED", @@ -3349,13 +3361,13 @@ "name": "MBECS", "version": "1.8.0", "sha256": "15nv5rbw158d071gscms6p42wzf6ibnabiqcq256rcz6j0r69b63", - "depends": ["cluster", "dplyr", "ggplot2", "gridExtra", "limma", "lme4", "lmerTest", "magrittr", "Matrix", "pheatmap", "phyloseq", "rmarkdown", "ruv", "sva", "tibble", "tidyr", "vegan"] + "depends": ["Matrix", "cluster", "dplyr", "ggplot2", "gridExtra", "limma", "lme4", "lmerTest", "magrittr", "pheatmap", "phyloseq", "rmarkdown", "ruv", "sva", "tibble", "tidyr", "vegan"] }, "MBQN": { "name": "MBQN", "version": "2.16.0", "sha256": "0c5knn15yiki5vi6ln5f0r4hkq3bnv8da5yqflgbgqwn7fn277cr", - "depends": ["BiocFileCache", "ggplot2", "limma", "PairedData", "preprocessCore", "rappdirs", "RCurl", "rmarkdown", "SummarizedExperiment", "xml2"] + "depends": ["BiocFileCache", "PairedData", "RCurl", "SummarizedExperiment", "ggplot2", "limma", "preprocessCore", "rappdirs", "rmarkdown", "xml2"] }, "MBttest": { "name": "MBttest", @@ -3367,7 +3379,7 @@ "name": "MCbiclust", "version": "1.28.0", "sha256": "1alz583dnmm9xvby1fcfkz2pxach6saj2ni5qma1r31ac4sx0b3l", - "depends": ["AnnotationDbi", "BiocParallel", "cluster", "GGally", "ggplot2", "GO_db", "org_Hs_eg_db", "scales", "WGCNA"] + "depends": ["AnnotationDbi", "BiocParallel", "GGally", "GO_db", "WGCNA", "cluster", "ggplot2", "org_Hs_eg_db", "scales"] }, "MDTS": { "name": "MDTS", @@ -3379,43 +3391,43 @@ "name": "MEAL", "version": "1.34.0", "sha256": "1njqd9546ggnncmnri8nm9h2cq1wrq075fpng86d994zpgvq2xn8", - "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "ggplot2", "Gviz", "IRanges", "isva", "limma", "matrixStats", "minfi", "missMethyl", "MultiDataSet", "permute", "S4Vectors", "SmartSVA", "SummarizedExperiment", "vegan"] + "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "Gviz", "IRanges", "MultiDataSet", "S4Vectors", "SmartSVA", "SummarizedExperiment", "ggplot2", "isva", "limma", "matrixStats", "minfi", "missMethyl", "permute", "vegan"] }, "MEAT": { "name": "MEAT", "version": "1.16.0", "sha256": "0qq5k0xc7vsc32nh6f1qw4cy960rh43a8caqpjprvkfgp9mbvxfg", - "depends": ["dplyr", "dynamicTreeCut", "glmnet", "impute", "minfi", "RPMM", "stringr", "SummarizedExperiment", "tibble", "wateRmelon"] + "depends": ["RPMM", "SummarizedExperiment", "dplyr", "dynamicTreeCut", "glmnet", "impute", "minfi", "stringr", "tibble", "wateRmelon"] }, "MEB": { "name": "MEB", "version": "1.18.0", "sha256": "18vhf7f0jx13b8vs4kgm2qli3xxinv9rcm4r8xfd9p1ldmmbh6bn", - "depends": ["e1071", "edgeR", "scater", "SingleCellExperiment", "SummarizedExperiment", "wrswoR"] + "depends": ["SingleCellExperiment", "SummarizedExperiment", "e1071", "edgeR", "scater", "wrswoR"] }, "MEDIPS": { "name": "MEDIPS", "version": "1.56.0", "sha256": "0lv4x4ms3gabin47lv08rl2igddnr2r9d5xf3w1zaz8d2fj1k1wq", - "depends": ["biomaRt", "Biostrings", "BSgenome", "DNAcopy", "edgeR", "GenomicRanges", "gtools", "IRanges", "preprocessCore", "Rsamtools", "rtracklayer"] + "depends": ["BSgenome", "Biostrings", "DNAcopy", "GenomicRanges", "IRanges", "Rsamtools", "biomaRt", "edgeR", "gtools", "preprocessCore", "rtracklayer"] }, "MEDME": { "name": "MEDME", "version": "1.64.0", "sha256": "1zqqbb36qy1ad3fp2b29wm94g0qj95p8aj4jskkj7zca5j01jvzr", - "depends": ["Biostrings", "drc", "MASS"] + "depends": ["Biostrings", "MASS", "drc"] }, "MEIGOR": { "name": "MEIGOR", "version": "1.38.0", "sha256": "05k3n6zr75hd76l7v19i88hp0y7x2k2x4nhdwx86ya9gp8xad069", - "depends": ["CNORode", "deSolve", "Rsolnp", "snowfall"] + "depends": ["CNORode", "Rsolnp", "deSolve", "snowfall"] }, "MGFM": { "name": "MGFM", "version": "1.38.0", "sha256": "0f6j2bq0zv2lfypd4wbbmapgs132k7yzjw11h9rs6c4llhlk5ns2", - "depends": ["annotate", "AnnotationDbi"] + "depends": ["AnnotationDbi", "annotate"] }, "MGFR": { "name": "MGFR", @@ -3427,31 +3439,31 @@ "name": "MGnifyR", "version": "1.0.0", "sha256": "0siqjril79bcbs90v7ng1j2rzrs4nl5y4wv1ih2cgp464n8agh6a", - "depends": ["ape", "BiocGenerics", "dplyr", "httr", "mia", "MultiAssayExperiment", "plyr", "reshape2", "S4Vectors", "SummarizedExperiment", "tidyjson", "TreeSummarizedExperiment", "urltools"] + "depends": ["BiocGenerics", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "ape", "dplyr", "httr", "mia", "plyr", "reshape2", "tidyjson", "urltools"] }, "MICSQTL": { "name": "MICSQTL", "version": "1.2.2", "sha256": "141dgc7k28ig9yw6km7ahjp0zyshg4kp3f6bs0ixnv6566dlb4c9", - "depends": ["BiocParallel", "dirmult", "ggplot2", "ggpubr", "ggridges", "glue", "magrittr", "nnls", "purrr", "S4Vectors", "SummarizedExperiment", "TCA", "TOAST"] + "depends": ["BiocParallel", "S4Vectors", "SummarizedExperiment", "TCA", "TOAST", "dirmult", "ggplot2", "ggpubr", "ggridges", "glue", "magrittr", "nnls", "purrr"] }, "MIRA": { "name": "MIRA", "version": "1.26.0", "sha256": "05s4wm7cnjyb1sg6zawp5rxj23ym5kkh95cj79k6cx6l0fb946c0", - "depends": ["Biobase", "BiocGenerics", "bsseq", "data_table", "GenomicRanges", "ggplot2", "IRanges", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "bsseq", "data_table", "ggplot2"] }, "MIRit": { "name": "MIRit", "version": "1.0.0", "sha256": "1c6zz24l2l362lkyha9ls7a990dpvpxskyzxz755zkf0q4cpdyn4", - "depends": ["AnnotationDbi", "BiocFileCache", "BiocParallel", "DESeq2", "edgeR", "fgsea", "genekitr", "geneset", "ggplot2", "ggpubr", "graph", "graphite", "httr", "limma", "MultiAssayExperiment", "Rcpp", "readxl", "Rgraphviz", "rlang"] + "depends": ["AnnotationDbi", "BiocFileCache", "BiocParallel", "DESeq2", "MultiAssayExperiment", "Rcpp", "Rgraphviz", "edgeR", "fgsea", "genekitr", "geneset", "ggplot2", "ggpubr", "graph", "graphite", "httr", "limma", "readxl", "rlang"] }, "MLInterfaces": { "name": "MLInterfaces", "version": "1.84.0", "sha256": "1m8clkb5rznzv2fwrl59csq8v0ibqwdm4fphq10b8pmyvj880qpn", - "depends": ["annotate", "Biobase", "BiocGenerics", "cluster", "fpc", "gbm", "gdata", "genefilter", "ggvis", "hwriter", "magrittr", "MASS", "mlbench", "pls", "RColorBrewer", "Rcpp", "rpart", "sfsmisc", "shiny", "SummarizedExperiment", "threejs"] + "depends": ["Biobase", "BiocGenerics", "MASS", "RColorBrewer", "Rcpp", "SummarizedExperiment", "annotate", "cluster", "fpc", "gbm", "gdata", "genefilter", "ggvis", "hwriter", "magrittr", "mlbench", "pls", "rpart", "sfsmisc", "shiny", "threejs"] }, "MLP": { "name": "MLP", @@ -3463,49 +3475,49 @@ "name": "MLSeq", "version": "2.22.0", "sha256": "0vm4giqqp2iq1w40nkn4bjc81ppdhqhbxq6w6ps3i2rdzwcq49ir", - "depends": ["Biobase", "caret", "DESeq2", "edgeR", "foreach", "ggplot2", "limma", "pamr", "plyr", "sSeq", "SummarizedExperiment", "testthat", "VennDiagram", "xtable"] + "depends": ["Biobase", "DESeq2", "SummarizedExperiment", "VennDiagram", "caret", "edgeR", "foreach", "ggplot2", "limma", "pamr", "plyr", "sSeq", "testthat", "xtable"] }, "MMDiff2": { "name": "MMDiff2", "version": "1.32.0", "sha256": "0yamcgjb5k77pkv1b0bja5f2i7aqw12wpyppf1mw9s8mqfx3cl0y", - "depends": ["Biobase", "Biostrings", "BSgenome", "GenomicRanges", "ggplot2", "locfit", "RColorBrewer", "Rsamtools", "S4Vectors", "shiny"] + "depends": ["BSgenome", "Biobase", "Biostrings", "GenomicRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "ggplot2", "locfit", "shiny"] }, "MMUPHin": { "name": "MMUPHin", "version": "1.18.1", "sha256": "0wh998bjbf8zkfrzmrnm8dmm7960w5dnaq1yyc1hl105al0j33aj", - "depends": ["cowplot", "dplyr", "fpc", "ggplot2", "igraph", "Maaslin2", "metafor", "stringr", "tidyr"] + "depends": ["Maaslin2", "cowplot", "dplyr", "fpc", "ggplot2", "igraph", "metafor", "stringr", "tidyr"] }, "MODA": { "name": "MODA", "version": "1.30.0", "sha256": "1cx3jz8hw1zm68cay84gkxq9wlfwfdm9ms70af6hck4fl2spxj66", - "depends": ["AMOUNTAIN", "cluster", "dynamicTreeCut", "igraph", "RColorBrewer", "WGCNA"] + "depends": ["AMOUNTAIN", "RColorBrewer", "WGCNA", "cluster", "dynamicTreeCut", "igraph"] }, "MOFA2": { "name": "MOFA2", "version": "1.14.0", "sha256": "0sf0vibw44ildxf5rdkqjhw85awl5iz9f62j9z660lf3f8h5v5qq", - "depends": ["basilisk", "corrplot", "cowplot", "DelayedArray", "dplyr", "forcats", "ggplot2", "ggrepel", "HDF5Array", "magrittr", "pheatmap", "RColorBrewer", "reshape2", "reticulate", "rhdf5", "Rtsne", "stringi", "tidyr", "uwot"] + "depends": ["DelayedArray", "HDF5Array", "RColorBrewer", "Rtsne", "basilisk", "corrplot", "cowplot", "dplyr", "forcats", "ggplot2", "ggrepel", "magrittr", "pheatmap", "reshape2", "reticulate", "rhdf5", "stringi", "tidyr", "uwot"] }, "MOGAMUN": { "name": "MOGAMUN", "version": "1.14.0", "sha256": "0l6pbn89a3pp157fbcwpkihmx869afi0qvm16yjac0mrhwspgbk8", - "depends": ["BiocParallel", "igraph", "RCy3", "RUnit", "stringr"] + "depends": ["BiocParallel", "RCy3", "RUnit", "igraph", "stringr"] }, "MOMA": { "name": "MOMA", "version": "1.16.0", "sha256": "1xbacfm9cikdhhb64l068hi4hcpqvh0g573cm8c3jxicxbgp3swv", - "depends": ["circlize", "cluster", "ComplexHeatmap", "dplyr", "ggplot2", "magrittr", "MKmisc", "MultiAssayExperiment", "qvalue", "RColorBrewer", "readr", "reshape2", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["ComplexHeatmap", "MKmisc", "MultiAssayExperiment", "RColorBrewer", "circlize", "cluster", "dplyr", "ggplot2", "magrittr", "qvalue", "readr", "reshape2", "rlang", "stringr", "tibble", "tidyr"] }, "MOSim": { "name": "MOSim", "version": "2.0.0", "sha256": "0mj53b4m4f2bzspgypiymhk780dcmbrfdrdki46bqjnb124y0c2q", - "depends": ["cpp11", "dplyr", "edgeR", "ggplot2", "HiddenMarkov", "IRanges", "lazyeval", "matrixStats", "Rcpp", "rlang", "S4Vectors", "scran", "Seurat", "Signac", "stringi", "stringr", "zoo"] + "depends": ["HiddenMarkov", "IRanges", "Rcpp", "S4Vectors", "Seurat", "Signac", "cpp11", "dplyr", "edgeR", "ggplot2", "lazyeval", "matrixStats", "rlang", "scran", "stringi", "stringr", "zoo"] }, "MPFE": { "name": "MPFE", @@ -3517,43 +3529,43 @@ "name": "MPRAnalyze", "version": "1.22.0", "sha256": "1gswhf7k4y0g28wv3hjwcrg9ms1g4ky0rxdlzli1in8d4cly7154", - "depends": ["BiocParallel", "progress", "SummarizedExperiment"] + "depends": ["BiocParallel", "SummarizedExperiment", "progress"] }, "MSA2dist": { "name": "MSA2dist", "version": "1.8.0", "sha256": "0bb37mdw671cc7751wfdsslcaz04i3sbjdp3y11n7yl5pmkx1k6b", - "depends": ["ape", "Biostrings", "doParallel", "dplyr", "foreach", "GenomicRanges", "IRanges", "pwalign", "Rcpp", "RcppThread", "rlang", "seqinr", "stringi", "stringr", "tibble", "tidyr"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "Rcpp", "RcppThread", "ape", "doParallel", "dplyr", "foreach", "pwalign", "rlang", "seqinr", "stringi", "stringr", "tibble", "tidyr"] }, "MSPrep": { "name": "MSPrep", "version": "1.14.0", "sha256": "0856s9a268sv2ablqb6s5gc98dl5z171xik1nk7jpx5vdx9iwj5b", - "depends": ["crmn", "dplyr", "magrittr", "missForest", "pcaMethods", "preprocessCore", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "sva", "tibble", "tidyr", "VIM"] + "depends": ["S4Vectors", "SummarizedExperiment", "VIM", "crmn", "dplyr", "magrittr", "missForest", "pcaMethods", "preprocessCore", "rlang", "stringr", "sva", "tibble", "tidyr"] }, "MSnID": { "name": "MSnID", "version": "1.38.0", "sha256": "0misrm4x4z5h8dfwcrwi24nhcjslqvbyk5n7qz6kf2zcgcwq8q44", - "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocGenerics", "BiocStyle", "Biostrings", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "iterators", "msmsTests", "MSnbase", "mzID", "mzR", "ProtGenerics", "purrr", "R_cache", "Rcpp", "reshape2", "rlang", "RUnit", "stringr", "tibble", "xtable"] + "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocGenerics", "BiocStyle", "Biostrings", "MSnbase", "ProtGenerics", "RUnit", "R_cache", "Rcpp", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "iterators", "msmsTests", "mzID", "mzR", "purrr", "reshape2", "rlang", "stringr", "tibble", "xtable"] }, "MSnbase": { "name": "MSnbase", "version": "2.30.1", "sha256": "0cdvi2mjvhj0h8x2rh3kkzrdnmzhr7d9a41m21r6b843a0q7hp6f", - "depends": ["affy", "Biobase", "BiocGenerics", "BiocParallel", "digest", "ggplot2", "impute", "IRanges", "lattice", "MALDIquant", "MASS", "MsCoreUtils", "mzID", "mzR", "pcaMethods", "plyr", "ProtGenerics", "PSMatch", "Rcpp", "S4Vectors", "scales", "vsn"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "IRanges", "MALDIquant", "MASS", "MsCoreUtils", "PSMatch", "ProtGenerics", "Rcpp", "S4Vectors", "affy", "digest", "ggplot2", "impute", "lattice", "mzID", "mzR", "pcaMethods", "plyr", "scales", "vsn"] }, "MSstats": { "name": "MSstats", - "version": "4.12.0", - "sha256": "0nrh0hjbsxmf390k5bnniichkwlw3scq8y90bw7hqv21k7wzwfvp", - "depends": ["checkmate", "data_table", "ggplot2", "ggrepel", "gplots", "htmltools", "limma", "lme4", "marray", "MASS", "MSstatsConvert", "plotly", "preprocessCore", "Rcpp", "RcppArmadillo", "statmod", "survival"] + "version": "4.12.1", + "sha256": "10dsw777qiaj042mfsram39n4bq0sps18lfgl98wb9y0d67c8xaz", + "depends": ["MASS", "MSstatsConvert", "Rcpp", "RcppArmadillo", "checkmate", "data_table", "ggplot2", "ggrepel", "gplots", "htmltools", "limma", "lme4", "marray", "plotly", "preprocessCore", "statmod", "survival"] }, "MSstatsBig": { "name": "MSstatsBig", "version": "1.2.0", "sha256": "1az35hsgij1cgpp6pl198dmlw26ddc1npdzaa5g8mwmdijwl3jz1", - "depends": ["arrow", "DBI", "dplyr", "MSstats", "MSstatsConvert", "readr", "sparklyr"] + "depends": ["DBI", "MSstats", "MSstatsConvert", "arrow", "dplyr", "readr", "sparklyr"] }, "MSstatsConvert": { "name": "MSstatsConvert", @@ -3565,43 +3577,43 @@ "name": "MSstatsLOBD", "version": "1.12.0", "sha256": "0jav2x8j07v4zmbwk89l85rycn7k9y0ifb07gzg64v0pkls4341s", - "depends": ["ggplot2", "minpack_lm", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "minpack_lm"] }, "MSstatsLiP": { "name": "MSstatsLiP", "version": "1.10.0", "sha256": "1kpfybpzav4bvy3jb2p3ws899mifjr564jqsdy9s4vbk5pphm9j0", - "depends": ["Biostrings", "checkmate", "data_table", "dplyr", "factoextra", "ggplot2", "ggpubr", "gridExtra", "MSstats", "MSstatsConvert", "MSstatsPTM", "purrr", "Rcpp", "scales", "stringr", "tibble", "tidyr", "tidyverse"] + "depends": ["Biostrings", "MSstats", "MSstatsConvert", "MSstatsPTM", "Rcpp", "checkmate", "data_table", "dplyr", "factoextra", "ggplot2", "ggpubr", "gridExtra", "purrr", "scales", "stringr", "tibble", "tidyr", "tidyverse"] }, "MSstatsPTM": { "name": "MSstatsPTM", "version": "2.6.0", "sha256": "0ivcxd2awrswih6n7is7zkcfrqiihk998g081krcp25i832xfqvh", - "depends": ["Biostrings", "checkmate", "data_table", "dplyr", "ggplot2", "ggrepel", "gridExtra", "MSstats", "MSstatsConvert", "MSstatsTMT", "Rcpp", "stringi", "stringr"] + "depends": ["Biostrings", "MSstats", "MSstatsConvert", "MSstatsTMT", "Rcpp", "checkmate", "data_table", "dplyr", "ggplot2", "ggrepel", "gridExtra", "stringi", "stringr"] }, "MSstatsQC": { "name": "MSstatsQC", "version": "2.22.0", "sha256": "0pp813mx6kwmxyyi67qsak09k012nn05pv60ndx8x6dq9ph8aghn", - "depends": ["dplyr", "ggExtra", "ggplot2", "MSnbase", "plotly", "qcmetrics"] + "depends": ["MSnbase", "dplyr", "ggExtra", "ggplot2", "plotly", "qcmetrics"] }, "MSstatsQCgui": { "name": "MSstatsQCgui", "version": "1.24.0", "sha256": "0kjidspplam63367yc09a17a3gq52rbmfrcnaxnxpiwkl7mphzz0", - "depends": ["dplyr", "ggExtra", "gridExtra", "MSstatsQC", "plotly", "shiny"] + "depends": ["MSstatsQC", "dplyr", "ggExtra", "gridExtra", "plotly", "shiny"] }, "MSstatsShiny": { "name": "MSstatsShiny", "version": "1.6.2", "sha256": "0h79yy5b9n2kfpbc3fhfajfmrqdzghj3ycaparn1v1dzjmi87z9y", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "ggrepel", "gplots", "Hmisc", "htmltools", "marray", "mockery", "MSstats", "MSstatsConvert", "MSstatsPTM", "MSstatsTMT", "plotly", "readxl", "shiny", "shinyBS", "shinybusy", "shinyjs", "tidyr", "uuid"] + "depends": ["DT", "Hmisc", "MSstats", "MSstatsConvert", "MSstatsPTM", "MSstatsTMT", "data_table", "dplyr", "ggplot2", "ggrepel", "gplots", "htmltools", "marray", "mockery", "plotly", "readxl", "shiny", "shinyBS", "shinybusy", "shinyjs", "tidyr", "uuid"] }, "MSstatsTMT": { "name": "MSstatsTMT", "version": "2.12.1", "sha256": "03nnwh5qbr3wd942yj5xa2gd2bk28ncxq2dri3my5gwsrlfxfxpn", - "depends": ["checkmate", "data_table", "ggplot2", "htmltools", "limma", "lme4", "lmerTest", "MSstats", "MSstatsConvert", "plotly"] + "depends": ["MSstats", "MSstatsConvert", "checkmate", "data_table", "ggplot2", "htmltools", "limma", "lme4", "lmerTest", "plotly"] }, "MVCClass": { "name": "MVCClass", @@ -3613,19 +3625,19 @@ "name": "MWASTools", "version": "1.28.0", "sha256": "1k72ycx0zlflcfpqapvh9m6mk3vc9wl0pbsi4jbcdigl6vx1zixv", - "depends": ["boot", "car", "ComplexHeatmap", "ggplot2", "glm2", "gridExtra", "igraph", "KEGGgraph", "KEGGREST", "ppcor", "qvalue", "RCurl", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "KEGGREST", "KEGGgraph", "RCurl", "SummarizedExperiment", "boot", "car", "ggplot2", "glm2", "gridExtra", "igraph", "ppcor", "qvalue"] }, "Maaslin2": { "name": "Maaslin2", "version": "1.18.0", "sha256": "0dl6s4lcd40nd7v0d3k3zn0mkm5rlzb8kf2cjxz298mgdif63xqh", - "depends": ["biglm", "car", "chemometrics", "cplm", "data_table", "dplyr", "edgeR", "ggplot2", "glmmTMB", "hash", "lme4", "lmerTest", "logging", "MASS", "metagenomeSeq", "optparse", "pbapply", "pcaPP", "pheatmap", "pscl", "robustbase", "tibble", "vegan"] + "depends": ["MASS", "biglm", "car", "chemometrics", "cplm", "data_table", "dplyr", "edgeR", "ggplot2", "glmmTMB", "hash", "lme4", "lmerTest", "logging", "metagenomeSeq", "optparse", "pbapply", "pcaPP", "pheatmap", "pscl", "robustbase", "tibble", "vegan"] }, "Macarron": { "name": "Macarron", - "version": "1.8.0", - "sha256": "18k6fxr4iihrxkraf2p01wmmkaahq95yb08bh4f8dw7ji3my50n7", - "depends": ["BiocParallel", "data_table", "DelayedArray", "dynamicTreeCut", "ff", "httr", "logging", "Maaslin2", "plyr", "psych", "RJSONIO", "SummarizedExperiment", "WGCNA", "xml2"] + "version": "1.8.1", + "sha256": "0v1sn04vkrxl0rj8mkq6ibmpsaavplm8hxl94kj4lp6ka81f4sqj", + "depends": ["BiocParallel", "DelayedArray", "Maaslin2", "RJSONIO", "SummarizedExperiment", "WGCNA", "data_table", "dynamicTreeCut", "ff", "httr", "logging", "plyr", "psych", "xml2"] }, "MantelCorr": { "name": "MantelCorr", @@ -3655,7 +3667,7 @@ "name": "MatrixQCvis", "version": "1.12.0", "sha256": "0hghmns8i1yhycr18yxp7b7knbdnf1f705z1pic1ql5llzsi8jzj", - "depends": ["ComplexHeatmap", "dplyr", "ExperimentHub", "ggplot2", "Hmisc", "htmlwidgets", "impute", "imputeLCMD", "limma", "MASS", "pcaMethods", "plotly", "proDA", "rlang", "rmarkdown", "Rtsne", "shiny", "shinydashboard", "shinyhelper", "shinyjs", "SummarizedExperiment", "tibble", "tidyr", "umap", "UpSetR", "vsn"] + "depends": ["ComplexHeatmap", "ExperimentHub", "Hmisc", "MASS", "Rtsne", "SummarizedExperiment", "UpSetR", "dplyr", "ggplot2", "htmlwidgets", "impute", "imputeLCMD", "limma", "pcaMethods", "plotly", "proDA", "rlang", "rmarkdown", "shiny", "shinydashboard", "shinyhelper", "shinyjs", "tibble", "tidyr", "umap", "vsn"] }, "MatrixRider": { "name": "MatrixRider", @@ -3679,7 +3691,7 @@ "name": "Melissa", "version": "1.20.0", "sha256": "0aswg1balk65rsnxnsdn65x5l5g1dya7z2n8yqr7agzigdw62pdf", - "depends": ["assertthat", "BiocStyle", "BPRMeth", "cowplot", "data_table", "doParallel", "foreach", "GenomicRanges", "ggplot2", "magrittr", "matrixcalc", "mclust", "MCMCpack", "mvtnorm", "ROCR", "truncnorm"] + "depends": ["BPRMeth", "BiocStyle", "GenomicRanges", "MCMCpack", "ROCR", "assertthat", "cowplot", "data_table", "doParallel", "foreach", "ggplot2", "magrittr", "matrixcalc", "mclust", "mvtnorm", "truncnorm"] }, "Mergeomics": { "name": "Mergeomics", @@ -3691,43 +3703,43 @@ "name": "MesKit", "version": "1.14.0", "sha256": "0r6a200zyp97vjdk78fch5xmvqbqjmhf9n7cc9y911ifll7md35a", - "depends": ["AnnotationDbi", "ape", "Biostrings", "circlize", "ComplexHeatmap", "cowplot", "data_table", "dplyr", "ggplot2", "ggrepel", "ggridges", "IRanges", "mclust", "phangorn", "pracma", "RColorBrewer", "S4Vectors", "tidyr"] + "depends": ["AnnotationDbi", "Biostrings", "ComplexHeatmap", "IRanges", "RColorBrewer", "S4Vectors", "ape", "circlize", "cowplot", "data_table", "dplyr", "ggplot2", "ggrepel", "ggridges", "mclust", "phangorn", "pracma", "tidyr"] }, "MetCirc": { "name": "MetCirc", "version": "1.34.0", "sha256": "1wkmhlxg3gxfxskhhxrm65y6vriggs34523adrsghx1ra0wgyjvf", - "depends": ["amap", "circlize", "ggplot2", "MsCoreUtils", "S4Vectors", "scales", "shiny", "Spectra"] + "depends": ["MsCoreUtils", "S4Vectors", "Spectra", "amap", "circlize", "ggplot2", "scales", "shiny"] }, "MetID": { "name": "MetID", "version": "1.22.0", "sha256": "0i6jpn1q0632klpa6817v9xs2kkdvsajhjv6h1p2f6jdx0smsd64", - "depends": ["ChemmineR", "devtools", "igraph", "Matrix", "stringr"] + "depends": ["ChemmineR", "Matrix", "devtools", "igraph", "stringr"] }, "MetNet": { "name": "MetNet", "version": "1.22.0", "sha256": "1dpp9z9h3dkbx9k0hxg5dr9178sbs095kyr2ka5sihxm2in0prrg", - "depends": ["BiocParallel", "bnlearn", "corpcor", "dplyr", "GeneNet", "GENIE3", "ggplot2", "parmigene", "psych", "rlang", "S4Vectors", "stabs", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["BiocParallel", "GENIE3", "GeneNet", "S4Vectors", "SummarizedExperiment", "bnlearn", "corpcor", "dplyr", "ggplot2", "parmigene", "psych", "rlang", "stabs", "tibble", "tidyr"] }, "MetaCyto": { "name": "MetaCyto", "version": "1.26.0", "sha256": "15yd35ql64ca9ixv6rcq9v6gaaxis9nzx4q2jdij3facrb2ryyfk", - "depends": ["cluster", "fastcluster", "flowCore", "FlowSOM", "ggplot2", "metafor", "tidyr"] + "depends": ["FlowSOM", "cluster", "fastcluster", "flowCore", "ggplot2", "metafor", "tidyr"] }, "MetaNeighbor": { "name": "MetaNeighbor", "version": "1.24.0", "sha256": "0sz15njb0y9vcmbv89k3x2sw4px8nmy3qhqkvyl69kxlcqdicgxi", - "depends": ["beanplot", "dplyr", "ggplot2", "gplots", "igraph", "Matrix", "matrixStats", "RColorBrewer", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["Matrix", "RColorBrewer", "SingleCellExperiment", "SummarizedExperiment", "beanplot", "dplyr", "ggplot2", "gplots", "igraph", "matrixStats", "tibble", "tidyr"] }, "MetaPhOR": { "name": "MetaPhOR", "version": "1.6.0", "sha256": "0r3zqb7rmw5fnwm6hkpy22gndpn4jd24471acqfsi3a894g0868p", - "depends": ["clusterProfiler", "ggplot2", "ggrepel", "pheatmap", "RCy3", "RecordLinkage", "stringr"] + "depends": ["RCy3", "RecordLinkage", "clusterProfiler", "ggplot2", "ggrepel", "pheatmap", "stringr"] }, "MetaboAnnotation": { "name": "MetaboAnnotation", @@ -3745,7 +3757,7 @@ "name": "MetaboSignal", "version": "1.34.0", "sha256": "0ldi6qs0hfnwlpvwc0v0yn3j6gms4kgays8f5fap8vj8nw2gljbj", - "depends": ["AnnotationDbi", "biomaRt", "EnsDb_Hsapiens_v75", "hpar", "igraph", "KEGGgraph", "KEGGREST", "MWASTools", "mygene", "org_Hs_eg_db", "RCurl"] + "depends": ["AnnotationDbi", "EnsDb_Hsapiens_v75", "KEGGREST", "KEGGgraph", "MWASTools", "RCurl", "biomaRt", "hpar", "igraph", "mygene", "org_Hs_eg_db"] }, "MethPed": { "name": "MethPed", @@ -3757,7 +3769,7 @@ "name": "MethReg", "version": "1.14.0", "sha256": "1fzbrp09d57s2zvxl7jsc8dqwchz43xl0vnxkj2r0q0knlpsbbr2", - "depends": ["AnnotationHub", "DelayedArray", "dplyr", "ExperimentHub", "GenomicRanges", "ggplot2", "ggpubr", "IRanges", "JASPAR2024", "MASS", "Matrix", "openxlsx", "plyr", "progress", "pscl", "readr", "rlang", "RSQLite", "S4Vectors", "sesame", "sesameData", "sfsmisc", "stringr", "SummarizedExperiment", "TFBSTools", "tibble", "tidyr"] + "depends": ["AnnotationHub", "DelayedArray", "ExperimentHub", "GenomicRanges", "IRanges", "JASPAR2024", "MASS", "Matrix", "RSQLite", "S4Vectors", "SummarizedExperiment", "TFBSTools", "dplyr", "ggplot2", "ggpubr", "openxlsx", "plyr", "progress", "pscl", "readr", "rlang", "sesame", "sesameData", "sfsmisc", "stringr", "tibble", "tidyr"] }, "MethTargetedNGS": { "name": "MethTargetedNGS", @@ -3769,19 +3781,19 @@ "name": "MethylAid", "version": "1.38.0", "sha256": "084mnllaj6qp5ai5bmj6wgc90bs270qbzl60sch1f863x8fv9lzr", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "ggplot2", "gridBase", "hexbin", "matrixStats", "minfi", "RColorBrewer", "shiny", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "RColorBrewer", "SummarizedExperiment", "ggplot2", "gridBase", "hexbin", "matrixStats", "minfi", "shiny"] }, "MethylMix": { "name": "MethylMix", "version": "2.34.0", "sha256": "1mdhqqlbkh24bqz0bxvzih2cnl38nyacrfhsz8mq8ky2j5rsrbg0", - "depends": ["data_table", "digest", "foreach", "ggplot2", "impute", "limma", "R_matlab", "RColorBrewer", "RCurl", "RPMM"] + "depends": ["RColorBrewer", "RCurl", "RPMM", "R_matlab", "data_table", "digest", "foreach", "ggplot2", "impute", "limma"] }, "MethylSeekR": { "name": "MethylSeekR", "version": "1.44.0", "sha256": "10b3m0d5z426p74x4hjg4imqg8iic0xjjnjcllwphy0ylk3cpzd5", - "depends": ["BSgenome", "geneplotter", "GenomicRanges", "IRanges", "mhsmm", "rtracklayer"] + "depends": ["BSgenome", "GenomicRanges", "IRanges", "geneplotter", "mhsmm", "rtracklayer"] }, "Mfuzz": { "name": "Mfuzz", @@ -3799,7 +3811,7 @@ "name": "MiPP", "version": "1.76.0", "sha256": "12wk4kk7qbba3681ikldivs3np9qvvl0mivqds0dd6l52v1ngj9p", - "depends": ["Biobase", "e1071", "MASS"] + "depends": ["Biobase", "MASS", "e1071"] }, "MiRaGE": { "name": "MiRaGE", @@ -3811,25 +3823,25 @@ "name": "MicrobiomeProfiler", "version": "1.10.0", "sha256": "1xz2s2alz61s5hp5fq42m5n3bby89lyp5mr7pgav8xkyiglk471f", - "depends": ["clusterProfiler", "config", "DT", "enrichplot", "ggplot2", "golem", "gson", "htmltools", "magrittr", "shiny", "shinycustomloader", "shinyWidgets"] + "depends": ["DT", "clusterProfiler", "config", "enrichplot", "ggplot2", "golem", "gson", "htmltools", "magrittr", "shiny", "shinyWidgets", "shinycustomloader"] }, "MicrobiotaProcess": { "name": "MicrobiotaProcess", - "version": "1.16.0", - "sha256": "0jqvxr77c9karq8wm53khs47vwrrvy86q6sl0dpsbydfmjw0blln", - "depends": ["ape", "Biostrings", "cli", "coin", "data_table", "dplyr", "dtplyr", "foreach", "ggfun", "ggplot2", "ggrepel", "ggsignif", "ggstar", "ggtree", "ggtreeExtra", "magrittr", "MASS", "patchwork", "pillar", "plyr", "rlang", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "tidytree", "treeio", "vegan", "zoo"] + "version": "1.16.1", + "sha256": "1x0yjxzdri6x1yin0d54r9wx48y3x2vy79wnkg37i070ira5hddw", + "depends": ["Biostrings", "MASS", "SummarizedExperiment", "ape", "cli", "coin", "data_table", "dplyr", "dtplyr", "foreach", "ggfun", "ggplot2", "ggrepel", "ggsignif", "ggstar", "ggtree", "ggtreeExtra", "magrittr", "patchwork", "pillar", "plyr", "rlang", "tibble", "tidyr", "tidyselect", "tidytree", "treeio", "vegan", "zoo"] }, "MineICA": { "name": "MineICA", "version": "1.44.0", "sha256": "1qzqfnrf23lrlxmds8hjblj169sylq1m9h07vwlz5zik5mxj6y90", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "biomaRt", "cluster", "colorspace", "fastICA", "foreach", "fpc", "ggplot2", "GOstats", "graph", "gtools", "Hmisc", "igraph", "JADE", "lumi", "lumiHumanAll_db", "marray", "mclust", "plyr", "RColorBrewer", "Rgraphviz", "scales", "xtable"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "GOstats", "Hmisc", "JADE", "RColorBrewer", "Rgraphviz", "annotate", "biomaRt", "cluster", "colorspace", "fastICA", "foreach", "fpc", "ggplot2", "graph", "gtools", "igraph", "lumi", "lumiHumanAll_db", "marray", "mclust", "plyr", "scales", "xtable"] }, "MinimumDistance": { "name": "MinimumDistance", "version": "1.48.0", "sha256": "1pqf2q5hxjb1dwg981aldl0sw10f86yszp6z511vzx1y70ca6j3h", - "depends": ["Biobase", "BiocGenerics", "data_table", "DNAcopy", "ff", "foreach", "GenomeInfoDb", "GenomicRanges", "IRanges", "lattice", "MatrixGenerics", "matrixStats", "oligoClasses", "S4Vectors", "SummarizedExperiment", "VanillaICE"] + "depends": ["Biobase", "BiocGenerics", "DNAcopy", "GenomeInfoDb", "GenomicRanges", "IRanges", "MatrixGenerics", "S4Vectors", "SummarizedExperiment", "VanillaICE", "data_table", "ff", "foreach", "lattice", "matrixStats", "oligoClasses"] }, "ModCon": { "name": "ModCon", @@ -3841,43 +3853,43 @@ "name": "Modstrings", "version": "1.20.0", "sha256": "0yc8gsgxlww2g9z1m6jl02aqmama10fkr2mvibvdi01s5pqwdbky", - "depends": ["BiocGenerics", "Biostrings", "crayon", "GenomicRanges", "IRanges", "S4Vectors", "stringi", "stringr", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "IRanges", "S4Vectors", "XVector", "crayon", "stringi", "stringr"] }, "MoleculeExperiment": { "name": "MoleculeExperiment", "version": "1.4.1", "sha256": "0w539058lm99z53lkjf9ljk1dr4fp150a9cwa9s9xrax90wpmy6j", - "depends": ["BiocParallel", "cli", "data_table", "dplyr", "EBImage", "ggplot2", "magrittr", "Matrix", "purrr", "rhdf5", "rjson", "rlang", "S4Vectors", "SpatialExperiment", "terra"] + "depends": ["BiocParallel", "EBImage", "Matrix", "S4Vectors", "SpatialExperiment", "cli", "data_table", "dplyr", "ggplot2", "magrittr", "purrr", "rhdf5", "rjson", "rlang", "terra"] }, "Moonlight2R": { "name": "Moonlight2R", "version": "1.2.0", "sha256": "0ff37hjp3llf875z4wym60vanda6gbysqmcp90dcbl33bx0fynja", - "depends": ["AnnotationHub", "Biobase", "BiocGenerics", "circlize", "clusterProfiler", "ComplexHeatmap", "doParallel", "DOSE", "dplyr", "easyPubMed", "EpiMix", "ExperimentHub", "foreach", "fuzzyjoin", "GenomicRanges", "GEOquery", "ggplot2", "gplots", "HiveR", "magrittr", "org_Hs_eg_db", "parmigene", "purrr", "qpdf", "randomForest", "RColorBrewer", "readr", "RISmed", "rtracklayer", "seqminer", "stringr", "tibble", "tidyHeatmap", "tidyr"] + "depends": ["AnnotationHub", "Biobase", "BiocGenerics", "ComplexHeatmap", "DOSE", "EpiMix", "ExperimentHub", "GEOquery", "GenomicRanges", "HiveR", "RColorBrewer", "RISmed", "circlize", "clusterProfiler", "doParallel", "dplyr", "easyPubMed", "foreach", "fuzzyjoin", "ggplot2", "gplots", "magrittr", "org_Hs_eg_db", "parmigene", "purrr", "qpdf", "randomForest", "readr", "rtracklayer", "seqminer", "stringr", "tibble", "tidyHeatmap", "tidyr"] }, "MoonlightR": { "name": "MoonlightR", "version": "1.30.0", "sha256": "0jhc7y01qrz3cg2jnjqwgi5cgrh6616q9k3f3hldkq0x6z0z1vwn", - "depends": ["Biobase", "circlize", "clusterProfiler", "doParallel", "DOSE", "foreach", "GEOquery", "gplots", "HiveR", "limma", "parmigene", "randomForest", "RColorBrewer", "RISmed", "SummarizedExperiment", "TCGAbiolinks"] + "depends": ["Biobase", "DOSE", "GEOquery", "HiveR", "RColorBrewer", "RISmed", "SummarizedExperiment", "TCGAbiolinks", "circlize", "clusterProfiler", "doParallel", "foreach", "gplots", "limma", "parmigene", "randomForest"] }, "Motif2Site": { "name": "Motif2Site", "version": "1.8.0", "sha256": "03rjhrxi016q0k7dzbfwr192sgc6z5kjyqdd6qzdajkpgq6dpi2m", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "edgeR", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "mixtools", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "edgeR", "mixtools"] }, "MotifDb": { "name": "MotifDb", "version": "1.46.0", "sha256": "1m8y76gg80625xz9g9101mfq19glk37p792yzz46807f7g6m8zbh", - "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "splitstackshape"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "IRanges", "S4Vectors", "rtracklayer", "splitstackshape"] }, "MouseFM": { "name": "MouseFM", "version": "1.14.0", "sha256": "0vwccf4fj664vbl0ggps51rac42j7xs5m33szhwdqpik6p2hyz7j", - "depends": ["biomaRt", "curl", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gtools", "httr", "IRanges", "jsonlite", "reshape2", "rlist", "scales", "tidyr"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "biomaRt", "curl", "data_table", "dplyr", "ggplot2", "gtools", "httr", "jsonlite", "reshape2", "rlist", "scales", "tidyr"] }, "MsBackendMassbank": { "name": "MsBackendMassbank", @@ -3901,19 +3913,19 @@ "name": "MsBackendRawFileReader", "version": "1.10.0", "sha256": "17xnbhnvz28ksfw51aba9p9wl5q0y7wl88yxsdhjwc58f3h8a1rn", - "depends": ["BiocParallel", "IRanges", "MsCoreUtils", "ProtGenerics", "rawrr", "S4Vectors", "Spectra"] + "depends": ["BiocParallel", "IRanges", "MsCoreUtils", "ProtGenerics", "S4Vectors", "Spectra", "rawrr"] }, "MsBackendSql": { "name": "MsBackendSql", "version": "1.4.0", "sha256": "1ng4ns03a8lbb63rczcl1j9c780vqnhc3plj5v3602xmnrxpadrl", - "depends": ["BiocGenerics", "BiocParallel", "data_table", "DBI", "IRanges", "MsCoreUtils", "progress", "ProtGenerics", "S4Vectors", "Spectra"] + "depends": ["BiocGenerics", "BiocParallel", "DBI", "IRanges", "MsCoreUtils", "ProtGenerics", "S4Vectors", "Spectra", "data_table", "progress"] }, "MsCoreUtils": { "name": "MsCoreUtils", - "version": "1.16.0", - "sha256": "18m6qbj43p6zsrsdp7in15z3hcnqzqcxbk24qvbq7328rrhdk84a", - "depends": ["clue", "MASS", "Rcpp", "S4Vectors"] + "version": "1.16.1", + "sha256": "1fjc0drsdkl9cyrq5k2kskb70x63mazbhpmlk9q7v77769v64gxb", + "depends": ["MASS", "Rcpp", "S4Vectors", "clue"] }, "MsDataHub": { "name": "MsDataHub", @@ -3937,13 +3949,13 @@ "name": "MsQuality", "version": "1.4.0", "sha256": "1khpjzzrrd2b7ngwq43y3sgndmrr6l8f504lyakr46xr1vyzppsl", - "depends": ["BiocParallel", "ggplot2", "htmlwidgets", "msdata", "MsExperiment", "plotly", "ProtGenerics", "rlang", "rmzqc", "shiny", "shinydashboard", "Spectra", "stringr", "tibble", "tidyr"] + "depends": ["BiocParallel", "MsExperiment", "ProtGenerics", "Spectra", "ggplot2", "htmlwidgets", "msdata", "plotly", "rlang", "rmzqc", "shiny", "shinydashboard", "stringr", "tibble", "tidyr"] }, "MuData": { "name": "MuData", "version": "1.8.0", "sha256": "0kjin6cfw9aipghd0imi2play19czplwcz2gi5akv6gk9wy98k8x", - "depends": ["DelayedArray", "Matrix", "MultiAssayExperiment", "rhdf5", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DelayedArray", "Matrix", "MultiAssayExperiment", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "rhdf5"] }, "Mulcom": { "name": "Mulcom", @@ -3953,21 +3965,21 @@ }, "MultiAssayExperiment": { "name": "MultiAssayExperiment", - "version": "1.30.2", - "sha256": "1j74ql0lz2xf0jsf4cjfapdmxbf6hb22699d3dyj8gwd1s92myjz", + "version": "1.30.3", + "sha256": "0spws2kawf5rqhp5h5wi46sa07c2yhhnjhdxpmxz8gkvqsvdjqkp", "depends": ["Biobase", "BiocBaseUtils", "BiocGenerics", "DelayedArray", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "tidyr"] }, "MultiBaC": { "name": "MultiBaC", "version": "1.14.0", "sha256": "0m08620sii9181y0vlcrw9nbcnp4vnjjxvp96iqlgg5fsb23wbl7", - "depends": ["ggplot2", "Matrix", "MultiAssayExperiment", "pcaMethods", "plotrix", "ropls"] + "depends": ["Matrix", "MultiAssayExperiment", "ggplot2", "pcaMethods", "plotrix", "ropls"] }, "MultiDataSet": { "name": "MultiDataSet", "version": "1.32.0", "sha256": "1y1j5svi52cvixjsn13122kvd0z0c7zfki3p6rr8wjd5w7riiyqw", - "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "ggplot2", "ggrepel", "IRanges", "limma", "qqman", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "ggplot2", "ggrepel", "limma", "qqman"] }, "MultiMed": { "name": "MultiMed", @@ -3979,7 +3991,7 @@ "name": "MultiRNAflow", "version": "1.2.0", "sha256": "0i7zs0gd8p927zcdsx85wdk3wi4ywg4s4y3ichqqidqs01hdxccd", - "depends": ["Biobase", "ComplexHeatmap", "DESeq2", "factoextra", "FactoMineR", "ggalluvial", "ggplot2", "ggplotify", "ggrepel", "gprofiler2", "Mfuzz", "plot3D", "plot3Drgl", "reshape2", "S4Vectors", "SummarizedExperiment", "UpSetR"] + "depends": ["Biobase", "ComplexHeatmap", "DESeq2", "FactoMineR", "Mfuzz", "S4Vectors", "SummarizedExperiment", "UpSetR", "factoextra", "ggalluvial", "ggplot2", "ggplotify", "ggrepel", "gprofiler2", "plot3D", "plot3Drgl", "reshape2"] }, "MultimodalExperiment": { "name": "MultimodalExperiment", @@ -3989,33 +4001,33 @@ }, "MungeSumstats": { "name": "MungeSumstats", - "version": "1.12.0", - "sha256": "16msjxxmnzycj2nny35lvwvlxw1n4ga8g1wn4fcfv7xg4ad6vy4v", - "depends": ["Biostrings", "BSgenome", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "googleAuthR", "httr", "IRanges", "jsonlite", "magrittr", "R_utils", "RCurl", "rtracklayer", "stringr", "VariantAnnotation"] + "version": "1.12.2", + "sha256": "0qgcvdhb3z1380jfb3wl81kq9lgm90s6hnbkbrv3psn3bsgs78mi", + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "RCurl", "R_utils", "VariantAnnotation", "data_table", "dplyr", "googleAuthR", "httr", "jsonlite", "magrittr", "rtracklayer", "stringr"] }, "MutationalPatterns": { "name": "MutationalPatterns", "version": "3.14.0", "sha256": "0smf4l023ckwsm5ckrqqw7kjyi1awp378mzhab7v8nk9n5smsj61", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "cowplot", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggalluvial", "ggdendro", "ggplot2", "IRanges", "magrittr", "NMF", "pracma", "purrr", "RColorBrewer", "S4Vectors", "stringr", "tibble", "tidyr", "VariantAnnotation"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "NMF", "RColorBrewer", "S4Vectors", "VariantAnnotation", "cowplot", "dplyr", "ggalluvial", "ggdendro", "ggplot2", "magrittr", "pracma", "purrr", "stringr", "tibble", "tidyr"] }, "NADfinder": { "name": "NADfinder", "version": "1.28.0", "sha256": "18bq7jf7f89263s4f4ib3qzlpwxsp181zjjm0cblkhjs7lw8p2zh", - "depends": ["ATACseqQC", "baseline", "BiocGenerics", "corrplot", "csaw", "EmpiricalBrownsMethod", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "limma", "metap", "Rsamtools", "rtracklayer", "S4Vectors", "signal", "SummarizedExperiment", "trackViewer"] + "depends": ["ATACseqQC", "BiocGenerics", "EmpiricalBrownsMethod", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "baseline", "corrplot", "csaw", "limma", "metap", "rtracklayer", "signal", "trackViewer"] }, "NBAMSeq": { "name": "NBAMSeq", "version": "1.20.0", "sha256": "1iglbxv7wcgn7lwah8jd1q7gsrqjr3874nivl1msla35hkqw4v9a", - "depends": ["BiocParallel", "DESeq2", "genefilter", "mgcv", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocParallel", "DESeq2", "S4Vectors", "SummarizedExperiment", "genefilter", "mgcv"] }, "NCIgraph": { "name": "NCIgraph", "version": "1.52.0", "sha256": "16kkg568hdjsn4jq9hd9gl1n31wavshn79bpwhg5jxci288zgai0", - "depends": ["graph", "KEGGgraph", "R_oo", "RBGL", "RCy3"] + "depends": ["KEGGgraph", "RBGL", "RCy3", "R_oo", "graph"] }, "NOISeq": { "name": "NOISeq", @@ -4027,7 +4039,7 @@ "name": "NPARC", "version": "1.16.0", "sha256": "0giq5nxqnsqppz12adln7kvdb8lifch57wg6avdl88xrdzpl3vfw", - "depends": ["BiocParallel", "broom", "dplyr", "magrittr", "MASS", "rlang", "tidyr"] + "depends": ["BiocParallel", "MASS", "broom", "dplyr", "magrittr", "rlang", "tidyr"] }, "NTW": { "name": "NTW", @@ -4039,19 +4051,19 @@ "name": "NanoMethViz", "version": "3.0.2", "sha256": "0nlbkikmxdq08m24sch8cy10m63v33536p5rx1zy5c4f4pa86yrw", - "depends": ["AnnotationDbi", "assertthat", "BiocSingular", "Biostrings", "bsseq", "cli", "cpp11", "data_table", "dbscan", "dplyr", "e1071", "forcats", "fs", "GenomicRanges", "ggplot2", "ggrastr", "glue", "IRanges", "limma", "patchwork", "purrr", "R_utils", "Rcpp", "readr", "rlang", "Rsamtools", "S4Vectors", "scales", "scico", "stringr", "SummarizedExperiment", "tibble", "tidyr", "withr", "zlibbioc"] + "depends": ["AnnotationDbi", "BiocSingular", "Biostrings", "GenomicRanges", "IRanges", "R_utils", "Rcpp", "Rsamtools", "S4Vectors", "SummarizedExperiment", "assertthat", "bsseq", "cli", "cpp11", "data_table", "dbscan", "dplyr", "e1071", "forcats", "fs", "ggplot2", "ggrastr", "glue", "limma", "patchwork", "purrr", "readr", "rlang", "scales", "scico", "stringr", "tibble", "tidyr", "withr", "zlibbioc"] }, "NanoStringDiff": { "name": "NanoStringDiff", "version": "1.34.0", "sha256": "0rasmzc12xl6mh9l2989wgp9q30665iqqgxr1fy6r57j7hixwbc1", - "depends": ["Biobase", "matrixStats", "Rcpp"] + "depends": ["Biobase", "Rcpp", "matrixStats"] }, "NanoStringNCTools": { "name": "NanoStringNCTools", "version": "1.12.0", "sha256": "1n1zc99v5xzd89q512v24wa7gmbgdp8g9aixvh6cjismah0vpgjr", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "ggbeeswarm", "ggiraph", "ggplot2", "ggthemes", "IRanges", "pheatmap", "RColorBrewer", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "IRanges", "RColorBrewer", "S4Vectors", "ggbeeswarm", "ggiraph", "ggplot2", "ggthemes", "pheatmap"] }, "NanoTube": { "name": "NanoTube", @@ -4063,13 +4075,13 @@ "name": "Nebulosa", "version": "1.14.0", "sha256": "0m5z6rribsrk9mzcksjh0nmpf4d0x0hn8jd80h0hj0hj8sj1ifgv", - "depends": ["ggplot2", "ggrastr", "ks", "Matrix", "patchwork", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Matrix", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "ggrastr", "ks", "patchwork"] }, "NetActivity": { "name": "NetActivity", "version": "1.6.0", "sha256": "0hssxa9i5c090929mnjs7nqn56fmg7qhq0iknfrl9d0wvpibm3bh", - "depends": ["airway", "DelayedArray", "DelayedMatrixStats", "DESeq2", "NetActivityData", "SummarizedExperiment"] + "depends": ["DESeq2", "DelayedArray", "DelayedMatrixStats", "NetActivityData", "SummarizedExperiment", "airway"] }, "NetPathMiner": { "name": "NetPathMiner", @@ -4081,37 +4093,37 @@ "name": "NetSAM", "version": "1.44.0", "sha256": "07l5cgl72mkh3j96lciwalsb0ps0bs7rfxzm78m5279palawf6vb", - "depends": ["AnnotationDbi", "biomaRt", "DBI", "doParallel", "foreach", "GO_db", "igraph", "R2HTML", "seriation", "survival", "WGCNA"] + "depends": ["AnnotationDbi", "DBI", "GO_db", "R2HTML", "WGCNA", "biomaRt", "doParallel", "foreach", "igraph", "seriation", "survival"] }, "NeuCA": { "name": "NeuCA", "version": "1.10.0", "sha256": "0k5bqdrja3x238fyrd7dm5jm94igh25b0ipb2zj6scpa4m15n67l", - "depends": ["e1071", "kableExtra", "keras", "limma", "SingleCellExperiment"] + "depends": ["SingleCellExperiment", "e1071", "kableExtra", "keras", "limma"] }, "NewWave": { "name": "NewWave", "version": "1.14.0", "sha256": "03m6dd0p2d542k36jwvz9ik8cddw1q3dz9ghqy0w1dbf685r0kf0", - "depends": ["BiocSingular", "DelayedArray", "irlba", "Matrix", "SharedObject", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocSingular", "DelayedArray", "Matrix", "SharedObject", "SingleCellExperiment", "SummarizedExperiment", "irlba"] }, "NoRCE": { "name": "NoRCE", "version": "1.16.0", "sha256": "0di23zmjfba4nmbbkcn2xhqamxxn4hfkhyh3skc46b66rl1yjy3n", - "depends": ["AnnotationDbi", "biomaRt", "DBI", "dbplyr", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "GO_db", "igraph", "IRanges", "KEGGREST", "png", "RCurl", "reactome_db", "readr", "reshape2", "RSQLite", "rtracklayer", "rWikiPathways", "S4Vectors", "stringr", "SummarizedExperiment", "tidyr", "zlibbioc"] + "depends": ["AnnotationDbi", "DBI", "GO_db", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "KEGGREST", "RCurl", "RSQLite", "S4Vectors", "SummarizedExperiment", "biomaRt", "dbplyr", "dplyr", "ggplot2", "igraph", "png", "rWikiPathways", "reactome_db", "readr", "reshape2", "rtracklayer", "stringr", "tidyr", "zlibbioc"] }, "NormalyzerDE": { "name": "NormalyzerDE", "version": "1.22.0", "sha256": "1kiwyf8fkdp7bml4b5f32schyl0s5c0b1ag4g826rakh487sb69b", - "depends": ["ape", "Biobase", "car", "ggforce", "ggplot2", "limma", "MASS", "matrixStats", "preprocessCore", "SummarizedExperiment", "vsn"] + "depends": ["Biobase", "MASS", "SummarizedExperiment", "ape", "car", "ggforce", "ggplot2", "limma", "matrixStats", "preprocessCore", "vsn"] }, "NormqPCR": { "name": "NormqPCR", "version": "1.50.0", "sha256": "1fl7qm6qmzxvv41qd1y8ds3r6dqk39rqgh6sl8imbggmnpb27j9h", - "depends": ["Biobase", "qpcR", "RColorBrewer", "ReadqPCR"] + "depends": ["Biobase", "RColorBrewer", "ReadqPCR", "qpcR"] }, "NuPoP": { "name": "NuPoP", @@ -4129,7 +4141,7 @@ "name": "OGRE", "version": "1.8.0", "sha256": "07xkprp1hjhavj9d360yhybpq9ghz0wxwaxlicpidm788nvksxqv", - "depends": ["AnnotationHub", "assertthat", "data_table", "DT", "GenomeInfoDb", "GenomicRanges", "ggplot2", "Gviz", "IRanges", "rtracklayer", "S4Vectors", "shiny", "shinyBS", "shinydashboard", "shinyFiles", "tidyr"] + "depends": ["AnnotationHub", "DT", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "assertthat", "data_table", "ggplot2", "rtracklayer", "shiny", "shinyBS", "shinyFiles", "shinydashboard", "tidyr"] }, "OLIN": { "name": "OLIN", @@ -4141,13 +4153,13 @@ "name": "OLINgui", "version": "1.78.0", "sha256": "0fcpy0g95l0h2id13dra46zyphyjdh2m7gw9i38i5jnr4arhy95z", - "depends": ["marray", "OLIN", "tkWidgets", "widgetTools"] + "depends": ["OLIN", "marray", "tkWidgets", "widgetTools"] }, "OMICsPCA": { "name": "OMICsPCA", "version": "1.22.0", "sha256": "0m5b6msnkvvv0lpj8zm976yqa5pd2vzkhpgzx58f95dbcaxpxflq", - "depends": ["cluster", "clValid", "corrplot", "cowplot", "data_table", "factoextra", "FactoMineR", "fpc", "GenomeInfoDb", "ggplot2", "HelloRanges", "IRanges", "kableExtra", "magick", "MASS", "MultiAssayExperiment", "NbClust", "OMICsPCAdata", "pdftools", "PerformanceAnalytics", "reshape2", "rgl", "rmarkdown", "rtracklayer", "tidyr"] + "depends": ["FactoMineR", "GenomeInfoDb", "HelloRanges", "IRanges", "MASS", "MultiAssayExperiment", "NbClust", "OMICsPCAdata", "PerformanceAnalytics", "clValid", "cluster", "corrplot", "cowplot", "data_table", "factoextra", "fpc", "ggplot2", "kableExtra", "magick", "pdftools", "reshape2", "rgl", "rmarkdown", "rtracklayer", "tidyr"] }, "OPWeight": { "name": "OPWeight", @@ -4159,13 +4171,13 @@ "name": "ORFhunteR", "version": "1.12.0", "sha256": "0ahs8j1qlfxblkbvxfd9836l72icr8lqaywpih9s4slx6j38l53p", - "depends": ["Biostrings", "BSgenome_Hsapiens_UCSC_hg38", "data_table", "Peptides", "randomForest", "Rcpp", "rtracklayer", "stringr", "xfun"] + "depends": ["BSgenome_Hsapiens_UCSC_hg38", "Biostrings", "Peptides", "Rcpp", "data_table", "randomForest", "rtracklayer", "stringr", "xfun"] }, "ORFik": { "name": "ORFik", "version": "1.24.0", "sha256": "0cm1rb4l0kciw8h1555qbixh9krwdnbgbvrb4dq753yjc3wdizfx", - "depends": ["AnnotationDbi", "BiocFileCache", "BiocGenerics", "BiocParallel", "biomaRt", "biomartr", "Biostrings", "BSgenome", "cowplot", "curl", "data_table", "DESeq2", "downloader", "fst", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "gridExtra", "httr", "IRanges", "jsonlite", "R_utils", "Rcpp", "RCurl", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "txdbmaker", "withr", "XML", "xml2"] + "depends": ["AnnotationDbi", "BSgenome", "BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RCurl", "R_utils", "Rcpp", "Rsamtools", "S4Vectors", "SummarizedExperiment", "XML", "biomaRt", "biomartr", "cowplot", "curl", "data_table", "downloader", "fst", "ggplot2", "gridExtra", "httr", "jsonlite", "rtracklayer", "txdbmaker", "withr", "xml2"] }, "OSAT": { "name": "OSAT", @@ -4183,19 +4195,19 @@ "name": "OUTRIDER", "version": "1.22.0", "sha256": "1zdv48ms62sy6pv24xnx5jf0286dr68zglckl38na2gvqymn8zj4", - "depends": ["BBmisc", "BiocGenerics", "BiocParallel", "data_table", "DESeq2", "generics", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggrepel", "heatmaply", "IRanges", "matrixStats", "pcaMethods", "pheatmap", "plotly", "plyr", "PRROC", "RColorBrewer", "Rcpp", "RcppArmadillo", "reshape2", "S4Vectors", "scales", "SummarizedExperiment", "txdbmaker"] + "depends": ["BBmisc", "BiocGenerics", "BiocParallel", "DESeq2", "GenomicFeatures", "GenomicRanges", "IRanges", "PRROC", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "generics", "ggplot2", "ggrepel", "heatmaply", "matrixStats", "pcaMethods", "pheatmap", "plotly", "plyr", "reshape2", "scales", "txdbmaker"] }, "OVESEG": { "name": "OVESEG", "version": "1.20.0", "sha256": "0bj2d8i5b9y3zrcpm7qapdywd1s3zgqiikz4by1l7832z7r2imyx", - "depends": ["BiocParallel", "fdrtool", "limma", "Rcpp", "SummarizedExperiment"] + "depends": ["BiocParallel", "Rcpp", "SummarizedExperiment", "fdrtool", "limma"] }, "OmaDB": { "name": "OmaDB", "version": "2.20.0", "sha256": "093hqayqa0gb3m6yckqa75i9ha9laxlkpjj4y64nzgja1ny2g17b", - "depends": ["ape", "Biostrings", "GenomicRanges", "httr", "IRanges", "jsonlite", "plyr", "topGO"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "ape", "httr", "jsonlite", "plyr", "topGO"] }, "OmicCircos": { "name": "OmicCircos", @@ -4211,8 +4223,8 @@ }, "OmnipathR": { "name": "OmnipathR", - "version": "3.11.10", - "sha256": "1izy0ycrvac0k67dxq8879rbdghkrczd3s2g5v607js7bmfxybjz", + "version": "3.12.2", + "sha256": "0ya013p8lsmmkv21r68c0bh72qrq3a6rxsmqvcbzhr558sqgv9mb", "depends": ["checkmate", "crayon", "curl", "digest", "dplyr", "httr", "igraph", "jsonlite", "later", "logger", "lubridate", "magrittr", "progress", "purrr", "rappdirs", "readr", "readxl", "rlang", "rmarkdown", "rvest", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "withr", "xml2", "yaml"] }, "OncoScore": { @@ -4225,13 +4237,13 @@ "name": "OncoSimulR", "version": "4.6.0", "sha256": "1j7d7ajlalhiwn12kpbagx8f0gnfsals4p5bkiik7a5ybwann33r", - "depends": ["car", "data_table", "dplyr", "ggplot2", "ggrepel", "graph", "gtools", "igraph", "RColorBrewer", "Rcpp", "Rgraphviz", "smatr", "stringr"] + "depends": ["RColorBrewer", "Rcpp", "Rgraphviz", "car", "data_table", "dplyr", "ggplot2", "ggrepel", "graph", "gtools", "igraph", "smatr", "stringr"] }, "OpenStats": { "name": "OpenStats", "version": "1.16.0", "sha256": "1hxazy0rf0rvvr1ivw33fi72099x3blzzzwymckxhqskmsj52120", - "depends": ["AICcmodavg", "car", "Hmisc", "jsonlite", "knitr", "MASS", "nlme", "rlist", "summarytools"] + "depends": ["AICcmodavg", "Hmisc", "MASS", "car", "jsonlite", "knitr", "nlme", "rlist", "summarytools"] }, "OrderedList": { "name": "OrderedList", @@ -4243,55 +4255,55 @@ "name": "Organism.dplyr", "version": "1.32.0", "sha256": "03z5pyqbaxwyrq5m858c8k69fwvclq98ksr84dc4m7r8lzz2hfxx", - "depends": ["AnnotationDbi", "AnnotationFilter", "BiocFileCache", "DBI", "dbplyr", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "rlang", "RSQLite", "S4Vectors", "tibble"] + "depends": ["AnnotationDbi", "AnnotationFilter", "BiocFileCache", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "dbplyr", "dplyr", "rlang", "tibble"] }, "OrganismDbi": { "name": "OrganismDbi", "version": "1.46.0", "sha256": "1cfh632rpmklmyd5cibwiy0i2pk2kk2m39g8mq5sxfwd2am4r0jk", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocManager", "DBI", "GenomicFeatures", "GenomicRanges", "graph", "IRanges", "RBGL", "S4Vectors", "txdbmaker"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocManager", "DBI", "GenomicFeatures", "GenomicRanges", "IRanges", "RBGL", "S4Vectors", "graph", "txdbmaker"] }, "Oscope": { "name": "Oscope", "version": "1.34.0", "sha256": "16d2ngakdg73rdx0bf1pz3z1n8npjzl3b7dn94g9zbayw4vp3x5z", - "depends": ["BiocParallel", "cluster", "EBSeq", "testthat"] + "depends": ["BiocParallel", "EBSeq", "cluster", "testthat"] }, "OutSplice": { "name": "OutSplice", "version": "1.4.0", "sha256": "1kln52s2a0icvsna2ip08gsmggbbp8arj4mnpaj068ff6maa4hy6", - "depends": ["AnnotationDbi", "GenomicFeatures", "GenomicRanges", "IRanges", "org_Hs_eg_db", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["AnnotationDbi", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "org_Hs_eg_db"] }, "PAA": { "name": "PAA", "version": "1.38.0", "sha256": "1afkvcb4d5iqzmn1nk51kn9xmwpbps00ymarsj3bc7zlf9aani4c", - "depends": ["e1071", "gplots", "gtools", "limma", "MASS", "mRMRe", "randomForest", "Rcpp", "ROCR", "sva"] + "depends": ["MASS", "ROCR", "Rcpp", "e1071", "gplots", "gtools", "limma", "mRMRe", "randomForest", "sva"] }, "PADOG": { "name": "PADOG", "version": "1.46.0", "sha256": "0rm8zyvgipb22z47nxyalfpdww8c7360zbmx4n7g3lnd2v8csgks", - "depends": ["AnnotationDbi", "Biobase", "doRNG", "foreach", "GSA", "hgu133a_db", "hgu133plus2_db", "KEGGdzPathwaysGEO", "KEGGREST", "limma", "nlme"] + "depends": ["AnnotationDbi", "Biobase", "GSA", "KEGGREST", "KEGGdzPathwaysGEO", "doRNG", "foreach", "hgu133a_db", "hgu133plus2_db", "limma", "nlme"] }, "PAIRADISE": { "name": "PAIRADISE", "version": "1.20.0", "sha256": "1dj5rx6jhcr3k9szhvaqc1savfbpqbm9q4i6n18mj23wzvvqhrp4", - "depends": ["abind", "BiocParallel", "nloptr", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocParallel", "S4Vectors", "SummarizedExperiment", "abind", "nloptr"] }, "PANR": { "name": "PANR", "version": "1.50.0", "sha256": "14s6ldpxvzkxh356s5i40sx4x286g81qjyfsd2ax4y32kk7qdb7r", - "depends": ["igraph", "MASS", "pvclust", "RedeR"] + "depends": ["MASS", "RedeR", "igraph", "pvclust"] }, "PAST": { "name": "PAST", "version": "1.20.0", "sha256": "01d7lw7x0wfszpi9lnq9alpba3d54z6lcai4fpdn4y53diamaygy", - "depends": ["doParallel", "dplyr", "foreach", "GenomicRanges", "ggplot2", "iterators", "qvalue", "rlang", "rtracklayer", "S4Vectors"] + "depends": ["GenomicRanges", "S4Vectors", "doParallel", "dplyr", "foreach", "ggplot2", "iterators", "qvalue", "rlang", "rtracklayer"] }, "PCAN": { "name": "PCAN", @@ -4303,19 +4315,19 @@ "name": "PCAtools", "version": "2.16.0", "sha256": "04a1fvwgqxzf7992lyh9qzz2z2fgmfwfjvpw5xr21pcrpas57l2r", - "depends": ["beachmat", "BH", "BiocParallel", "BiocSingular", "cowplot", "DelayedArray", "DelayedMatrixStats", "dqrng", "ggplot2", "ggrepel", "lattice", "Matrix", "Rcpp", "reshape2"] + "depends": ["BH", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "Rcpp", "beachmat", "cowplot", "dqrng", "ggplot2", "ggrepel", "lattice", "reshape2"] }, "PDATK": { "name": "PDATK", "version": "1.12.0", "sha256": "079gdwh9m90r5b0p0szqv222sgdmjr6s3sz19l5xz0435r7h53nv", - "depends": ["BiocGenerics", "BiocParallel", "caret", "clusterRepro", "ConsensusClusterPlus", "CoreGx", "data_table", "dplyr", "genefu", "ggplot2", "ggplotify", "igraph", "MatrixGenerics", "matrixStats", "MultiAssayExperiment", "piano", "plyr", "pROC", "RColorBrewer", "reportROC", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "survcomp", "survival", "survminer", "switchBox", "verification"] + "depends": ["BiocGenerics", "BiocParallel", "ConsensusClusterPlus", "CoreGx", "MatrixGenerics", "MultiAssayExperiment", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "caret", "clusterRepro", "data_table", "dplyr", "genefu", "ggplot2", "ggplotify", "igraph", "matrixStats", "pROC", "piano", "plyr", "reportROC", "rlang", "scales", "survcomp", "survival", "survminer", "switchBox", "verification"] }, "PECA": { "name": "PECA", "version": "1.40.0", "sha256": "0vx17yhls9ccmp0mns7w89dq49d3alqnzxvq3kvhjrdxnhgdn5d1", - "depends": ["affy", "aroma_affymetrix", "aroma_core", "genefilter", "limma", "preprocessCore", "ROTS"] + "depends": ["ROTS", "affy", "aroma_affymetrix", "aroma_core", "genefilter", "limma", "preprocessCore"] }, "PICS": { "name": "PICS", @@ -4327,19 +4339,19 @@ "name": "PING", "version": "2.48.0", "sha256": "1r09afnm6m9s9z7f0g6wsm677pc681j985psddzgqfmcdwbz75i3", - "depends": ["BiocGenerics", "BSgenome", "fda", "GenomicRanges", "Gviz", "IRanges", "PICS", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "GenomicRanges", "Gviz", "IRanges", "PICS", "S4Vectors", "fda"] }, "PIPETS": { "name": "PIPETS", - "version": "1.0.0", - "sha256": "12cbjmdgbjif3kjm9km55nvnb0srw8nzcf3x3gw86v1wi718jzv7", - "depends": ["BiocGenerics", "dplyr", "GenomicRanges"] + "version": "1.0.3", + "sha256": "0argzw874689hn4dddips86rpvn4i176gxj18j3f2jx5z4j61y4a", + "depends": ["BiocGenerics", "GenomicRanges", "dplyr"] }, "PIUMA": { "name": "PIUMA", "version": "1.0.0", "sha256": "10b8d8525pz7bl8kg5ga0ca2ngns7g9ik2grhvx920mza7pail46", - "depends": ["cluster", "dbscan", "ggplot2", "Hmisc", "igraph", "kernlab", "patchwork", "scales", "SummarizedExperiment", "tsne", "umap", "vegan"] + "depends": ["Hmisc", "SummarizedExperiment", "cluster", "dbscan", "ggplot2", "igraph", "kernlab", "patchwork", "scales", "tsne", "umap", "vegan"] }, "PLPE": { "name": "PLPE", @@ -4351,31 +4363,31 @@ "name": "PLSDAbatch", "version": "1.0.0", "sha256": "15zaxr8qv5rp04r8430bl8llkdx4vhwkjn8bl8a8sv6q39vvqvys", - "depends": ["Biobase", "BiocStyle", "ggplot2", "ggpubr", "gridExtra", "lmerTest", "mixOmics", "performance", "pheatmap", "Rdpack", "scales", "TreeSummarizedExperiment", "vegan"] + "depends": ["Biobase", "BiocStyle", "Rdpack", "TreeSummarizedExperiment", "ggplot2", "ggpubr", "gridExtra", "lmerTest", "mixOmics", "performance", "pheatmap", "scales", "vegan"] }, "POMA": { "name": "POMA", "version": "1.14.0", "sha256": "1g9xsmg3zv5h7l2wxk4zm4fsihzah8phg33p2hhqbinzkzk6pbkw", - "depends": ["broom", "caret", "ComplexHeatmap", "dbscan", "DESeq2", "dplyr", "FSA", "ggplot2", "ggrepel", "glmnet", "impute", "janitor", "limma", "lme4", "magrittr", "MASS", "mixOmics", "randomForest", "RankProd", "rlang", "SummarizedExperiment", "sva", "tibble", "tidyr", "uwot", "vegan"] + "depends": ["ComplexHeatmap", "DESeq2", "FSA", "MASS", "RankProd", "SummarizedExperiment", "broom", "caret", "dbscan", "dplyr", "ggplot2", "ggrepel", "glmnet", "impute", "janitor", "limma", "lme4", "magrittr", "mixOmics", "randomForest", "rlang", "sva", "tibble", "tidyr", "uwot", "vegan"] }, "POWSC": { "name": "POWSC", "version": "1.12.0", "sha256": "01jh4lhipkj5iga3vp0m42klpi8160mbzsqb5b029h7sil8n3w94", - "depends": ["Biobase", "ggplot2", "limma", "MAST", "pheatmap", "RColorBrewer", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Biobase", "MAST", "RColorBrewer", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "limma", "pheatmap"] }, "PPInfer": { "name": "PPInfer", "version": "1.30.0", "sha256": "1b5x9z2w9vpnkbmgh05lxpg1pkjhxnsxaz86ma018czicarxqcx3", - "depends": ["biomaRt", "fgsea", "ggplot2", "httr", "igraph", "kernlab", "STRINGdb", "yeastExpData"] + "depends": ["STRINGdb", "biomaRt", "fgsea", "ggplot2", "httr", "igraph", "kernlab", "yeastExpData"] }, "PREDA": { "name": "PREDA", "version": "1.50.0", "sha256": "17xcaw5spcl41dgilpx6cq9df1zzzrk4x6xaxpa5pmmfn7gfk4zv", - "depends": ["annotate", "Biobase", "lokern", "multtest"] + "depends": ["Biobase", "annotate", "lokern", "multtest"] }, "PROMISE": { "name": "PROMISE", @@ -4405,25 +4417,25 @@ "name": "PSMatch", "version": "1.8.0", "sha256": "13w145is3d95392qqdq6qh3mrlcixbj0jzz4r590xas1qjp5d03h", - "depends": ["BiocGenerics", "BiocParallel", "igraph", "Matrix", "MsCoreUtils", "ProtGenerics", "QFeatures", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "Matrix", "MsCoreUtils", "ProtGenerics", "QFeatures", "S4Vectors", "igraph"] }, "PWMEnrich": { "name": "PWMEnrich", "version": "4.40.0", "sha256": "0fzmsm880w1vwbjcakc5mkljx41rpk8m71g49kwmjgb1z36173m2", - "depends": ["BiocGenerics", "Biostrings", "evd", "gdata", "S4Vectors", "seqLogo"] + "depends": ["BiocGenerics", "Biostrings", "S4Vectors", "evd", "gdata", "seqLogo"] }, "PanViz": { "name": "PanViz", "version": "1.6.0", "sha256": "1h4fxqxkaph5j3vkfhmmkhvmqa8czzdzxcg6f06v94hqf38i86i5", - "depends": ["colorspace", "data_table", "dplyr", "easycsv", "futile_logger", "igraph", "magrittr", "RColorBrewer", "rentrez", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "colorspace", "data_table", "dplyr", "easycsv", "futile_logger", "igraph", "magrittr", "rentrez", "rlang", "stringr", "tibble", "tidyr"] }, "PanomiR": { "name": "PanomiR", "version": "1.8.0", "sha256": "0hzhhrknspdw81dn48xqx532n27lj88k57ydsfxfm6rkix87pv96", - "depends": ["clusterProfiler", "dplyr", "forcats", "GSEABase", "igraph", "limma", "metap", "org_Hs_eg_db", "preprocessCore", "RColorBrewer", "rlang", "tibble", "withr"] + "depends": ["GSEABase", "RColorBrewer", "clusterProfiler", "dplyr", "forcats", "igraph", "limma", "metap", "org_Hs_eg_db", "preprocessCore", "rlang", "tibble", "withr"] }, "Path2PPI": { "name": "Path2PPI", @@ -4441,85 +4453,85 @@ "name": "PathoStat", "version": "1.30.0", "sha256": "1y3gzv4nq9jykdl07mabw51m60g267hb5sjjn3p9g7r6ysasj8c2", - "depends": ["ape", "BiocStyle", "ComplexHeatmap", "corpcor", "DESeq2", "devtools", "dplyr", "DT", "edgeR", "ggplot2", "glmnet", "gmodels", "knitr", "limma", "matrixStats", "phyloseq", "plotly", "plyr", "RColorBrewer", "rentrez", "reshape2", "ROCR", "scales", "shiny", "shinyjs", "tidyr", "vegan", "webshot", "XML"] + "depends": ["BiocStyle", "ComplexHeatmap", "DESeq2", "DT", "RColorBrewer", "ROCR", "XML", "ape", "corpcor", "devtools", "dplyr", "edgeR", "ggplot2", "glmnet", "gmodels", "knitr", "limma", "matrixStats", "phyloseq", "plotly", "plyr", "rentrez", "reshape2", "scales", "shiny", "shinyjs", "tidyr", "vegan", "webshot"] }, "PeacoQC": { "name": "PeacoQC", "version": "1.14.0", "sha256": "1r354h8lmp0r2nlvr9xj45dm8gbqrsfhl2p3wc9gvldsllq7z3ix", - "depends": ["circlize", "ComplexHeatmap", "flowCore", "flowWorkspace", "ggplot2", "gridExtra", "plyr"] + "depends": ["ComplexHeatmap", "circlize", "flowCore", "flowWorkspace", "ggplot2", "gridExtra", "plyr"] }, "Pedixplorer": { "name": "Pedixplorer", "version": "1.0.0", "sha256": "0nkvypb1gh0b43p864c9rnfbvsdc9jb2jr3c0jrg33crxjf6rmr0", - "depends": ["dplyr", "ggplot2", "Matrix", "plyr", "quadprog", "S4Vectors", "stringr", "testthat", "tidyr"] + "depends": ["Matrix", "S4Vectors", "dplyr", "ggplot2", "plyr", "quadprog", "stringr", "testthat", "tidyr"] }, "PepsNMR": { "name": "PepsNMR", "version": "1.22.0", "sha256": "0z3kw8j972zmrcyikag5js20zpgc3l5bgkn5q31dzi1q7ynpkwhv", - "depends": ["ggplot2", "gridExtra", "Matrix", "matrixStats", "ptw", "reshape2"] + "depends": ["Matrix", "ggplot2", "gridExtra", "matrixStats", "ptw", "reshape2"] }, "PhIPData": { "name": "PhIPData", "version": "1.12.0", "sha256": "1ar7fdsxngdyikcvi7j230jqfhdvji4cvfrxkn606wy764mrpyrm", - "depends": ["BiocFileCache", "BiocGenerics", "cli", "edgeR", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocFileCache", "BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "cli", "edgeR"] }, "PharmacoGx": { "name": "PharmacoGx", "version": "3.8.0", "sha256": "098zg2c8xiw6v8fc072cnwlls5q762yjykaf6cjhyrz00bqxmvh1", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "boot", "caTools", "checkmate", "coop", "CoreGx", "data_table", "downloader", "ggplot2", "jsonlite", "magicaxis", "MultiAssayExperiment", "RColorBrewer", "Rcpp", "reshape2", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "CoreGx", "MultiAssayExperiment", "RColorBrewer", "Rcpp", "S4Vectors", "SummarizedExperiment", "boot", "caTools", "checkmate", "coop", "data_table", "downloader", "ggplot2", "jsonlite", "magicaxis", "reshape2"] }, "PhenStat": { "name": "PhenStat", "version": "2.40.0", "sha256": "0dpnij94h808aab8pyvvk7lnfn00f1hkisaasv28blj14fml63s8", - "depends": ["car", "corrplot", "ggplot2", "graph", "knitr", "lme4", "logistf", "MASS", "msgps", "nlme", "nortest", "pingr", "reshape", "SmoothWin"] + "depends": ["MASS", "SmoothWin", "car", "corrplot", "ggplot2", "graph", "knitr", "lme4", "logistf", "msgps", "nlme", "nortest", "pingr", "reshape"] }, "PhenoGeneRanker": { "name": "PhenoGeneRanker", "version": "1.12.0", "sha256": "1l85ibg1nm4dvwjc7b1gqmq6z5yrg3phfr24i23fzlddbwyx75hh", - "depends": ["doParallel", "dplyr", "foreach", "igraph", "Matrix"] + "depends": ["Matrix", "doParallel", "dplyr", "foreach", "igraph"] }, "PhosR": { "name": "PhosR", "version": "1.14.0", "sha256": "05lc2l65nl15250f39rw7pcsfxw74rcakb6gg5wcp515iv13li07", - "depends": ["BiocGenerics", "circlize", "dendextend", "dplyr", "e1071", "GGally", "ggdendro", "ggplot2", "ggpubr", "ggtext", "igraph", "limma", "network", "pcaMethods", "pheatmap", "preprocessCore", "RColorBrewer", "reshape2", "rlang", "ruv", "S4Vectors", "stringi", "SummarizedExperiment", "tidyr"] + "depends": ["BiocGenerics", "GGally", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "circlize", "dendextend", "dplyr", "e1071", "ggdendro", "ggplot2", "ggpubr", "ggtext", "igraph", "limma", "network", "pcaMethods", "pheatmap", "preprocessCore", "reshape2", "rlang", "ruv", "stringi", "tidyr"] }, "PhyloProfile": { "name": "PhyloProfile", "version": "1.18.0", "sha256": "04z6k0i28d48v1d7n7zgxkb9n1747k27h5b5zlj8id8w293ggcaa", - "depends": ["ape", "BiocStyle", "bioDist", "Biostrings", "colourpicker", "data_table", "DT", "energy", "ExperimentHub", "ggplot2", "gridExtra", "OmaDB", "pbapply", "plyr", "RColorBrewer", "RCurl", "shiny", "shinyBS", "shinycssloaders", "shinyFiles", "shinyjs", "stringr", "xml2", "yaml", "zoo"] + "depends": ["BiocStyle", "Biostrings", "DT", "ExperimentHub", "OmaDB", "RColorBrewer", "RCurl", "ape", "bioDist", "colourpicker", "data_table", "energy", "ggplot2", "gridExtra", "pbapply", "plyr", "shiny", "shinyBS", "shinyFiles", "shinycssloaders", "shinyjs", "stringr", "xml2", "yaml", "zoo"] }, "Pigengene": { "name": "Pigengene", "version": "1.30.0", "sha256": "08jgn7cx3gvxsih8jp9xh1irf7f0j0yfw4srbc6ynffc0197papc", - "depends": ["BiocStyle", "bnlearn", "C50", "clusterProfiler", "DBI", "DOSE", "dplyr", "gdata", "ggplot2", "GO_db", "graph", "impute", "MASS", "matrixStats", "openxlsx", "partykit", "pheatmap", "preprocessCore", "ReactomePA", "Rgraphviz", "WGCNA"] + "depends": ["BiocStyle", "C50", "DBI", "DOSE", "GO_db", "MASS", "ReactomePA", "Rgraphviz", "WGCNA", "bnlearn", "clusterProfiler", "dplyr", "gdata", "ggplot2", "graph", "impute", "matrixStats", "openxlsx", "partykit", "pheatmap", "preprocessCore"] }, "PoDCall": { "name": "PoDCall", "version": "1.12.0", "sha256": "121clnkr598p7iy91s0dp76ammz853p2cds0zy15pjj8n21rc7lv", - "depends": ["diptest", "DT", "ggplot2", "gridExtra", "LaplacesDemon", "mclust", "purrr", "readr", "rlist", "shiny", "shinyjs"] + "depends": ["DT", "LaplacesDemon", "diptest", "ggplot2", "gridExtra", "mclust", "purrr", "readr", "rlist", "shiny", "shinyjs"] }, "PrInCE": { "name": "PrInCE", "version": "1.20.0", "sha256": "173vakwqjalh2spz1f7qq6ngw8hjkqpj4zf0rx6xsnycjn54jip0", - "depends": ["Biobase", "dplyr", "forecast", "Hmisc", "LiblineaR", "magrittr", "MSnbase", "naivebayes", "progress", "purrr", "ranger", "Rdpack", "robustbase", "speedglm", "tester", "tidyr"] + "depends": ["Biobase", "Hmisc", "LiblineaR", "MSnbase", "Rdpack", "dplyr", "forecast", "magrittr", "naivebayes", "progress", "purrr", "ranger", "robustbase", "speedglm", "tester", "tidyr"] }, "Prostar": { "name": "Prostar", "version": "1.36.2", "sha256": "140whr7klab1as5y8h9lbmlgn4f63kfdfhzjyxjp8pk3aq1xv53i", - "depends": ["Biobase", "colourpicker", "DAPAR", "DAPARdata", "data_table", "DT", "future", "ggplot2", "gplots", "gtools", "highcharter", "htmlwidgets", "later", "markdown", "promises", "R_utils", "rclipboard", "RColorBrewer", "rhandsontable", "sass", "shiny", "shinyAce", "shinyBS", "shinycssloaders", "shinyjqui", "shinyjs", "shinythemes", "shinyTree", "shinyWidgets", "tibble", "vioplot", "webshot", "XML"] + "depends": ["Biobase", "DAPAR", "DAPARdata", "DT", "RColorBrewer", "R_utils", "XML", "colourpicker", "data_table", "future", "ggplot2", "gplots", "gtools", "highcharter", "htmlwidgets", "later", "markdown", "promises", "rclipboard", "rhandsontable", "sass", "shiny", "shinyAce", "shinyBS", "shinyTree", "shinyWidgets", "shinycssloaders", "shinyjqui", "shinyjs", "shinythemes", "tibble", "vioplot", "webshot"] }, "ProtGenerics": { "name": "ProtGenerics", @@ -4531,7 +4543,7 @@ "name": "ProteoDisco", "version": "1.10.0", "sha256": "10cdniinadihp4acdz22c0zjg3if3rqn9cy753f2x1nq539n3vql", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "checkmate", "cleaver", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "ParallelLogger", "plyr", "rlang", "S4Vectors", "tibble", "tidyr", "VariantAnnotation", "XVector"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "ParallelLogger", "S4Vectors", "VariantAnnotation", "XVector", "checkmate", "cleaver", "dplyr", "plyr", "rlang", "tibble", "tidyr"] }, "ProteoMM": { "name": "ProteoMM", @@ -4543,79 +4555,79 @@ "name": "PureCN", "version": "2.10.0", "sha256": "1vywvl90nvqlzbamn6g6iparn3b09zkz95sw13rgp8qlqc192nbf", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "data_table", "DNAcopy", "futile_logger", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "Matrix", "mclust", "RColorBrewer", "rhdf5", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "VGAM"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "DNAcopy", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VGAM", "VariantAnnotation", "data_table", "futile_logger", "ggplot2", "gridExtra", "mclust", "rhdf5", "rtracklayer"] }, "Pviz": { "name": "Pviz", "version": "1.38.0", "sha256": "1hshfgnidshwfka8l0fs4x4znpmmdi42wnkrrl6rhchj9dymjcnr", - "depends": ["Biostrings", "biovizBase", "data_table", "GenomicRanges", "Gviz", "IRanges"] + "depends": ["Biostrings", "GenomicRanges", "Gviz", "IRanges", "biovizBase", "data_table"] }, "QDNAseq": { "name": "QDNAseq", "version": "1.40.0", "sha256": "1myk6qgl45ya7qw6sx6xc98d8m5ffl2ghm3zvqmyh9r0sp6x184f", - "depends": ["Biobase", "CGHbase", "CGHcall", "DNAcopy", "future_apply", "GenomicRanges", "IRanges", "matrixStats", "R_utils", "Rsamtools"] + "depends": ["Biobase", "CGHbase", "CGHcall", "DNAcopy", "GenomicRanges", "IRanges", "R_utils", "Rsamtools", "future_apply", "matrixStats"] }, "QFeatures": { "name": "QFeatures", - "version": "1.14.1", - "sha256": "1sgvabfad3zibrg449y7hw8l59yb2d8q01x7lp841m45b1g0q9d8", - "depends": ["AnnotationFilter", "Biobase", "BiocGenerics", "igraph", "IRanges", "lazyeval", "MsCoreUtils", "MultiAssayExperiment", "plotly", "ProtGenerics", "reshape2", "S4Vectors", "SummarizedExperiment", "tidyr", "tidyselect"] + "version": "1.14.2", + "sha256": "1vd1kvx2kr47czz58375msc2x8p155cn0zqr4w7i1v1ki951r3a4", + "depends": ["AnnotationFilter", "Biobase", "BiocGenerics", "IRanges", "MsCoreUtils", "MultiAssayExperiment", "ProtGenerics", "S4Vectors", "SummarizedExperiment", "igraph", "lazyeval", "plotly", "reshape2", "tidyr", "tidyselect"] }, "QSutils": { "name": "QSutils", "version": "1.22.0", "sha256": "10z7cmhaqn4cp2lw3xq1mhjcjbph2lsprdz8k9q3qkmxgzl3anik", - "depends": ["ape", "BiocGenerics", "Biostrings", "psych", "pwalign"] + "depends": ["BiocGenerics", "Biostrings", "ape", "psych", "pwalign"] }, "QTLExperiment": { "name": "QTLExperiment", "version": "1.2.0", "sha256": "1kns5kgfazfyg3bf19hvkqngq4n6xzqww5aya2h8bakl53bzk2sc", - "depends": ["ashr", "BiocGenerics", "checkmate", "collapse", "dplyr", "rlang", "S4Vectors", "SummarizedExperiment", "tibble", "tidyr", "vroom"] + "depends": ["BiocGenerics", "S4Vectors", "SummarizedExperiment", "ashr", "checkmate", "collapse", "dplyr", "rlang", "tibble", "tidyr", "vroom"] }, "QUBIC": { "name": "QUBIC", "version": "1.32.0", "sha256": "1dqg7vdpmsjd5prswz7g223q0wzwih44k8fz2cy5a83cdc1c7xl2", - "depends": ["biclust", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "biclust"] }, "Qtlizer": { "name": "Qtlizer", "version": "1.18.0", "sha256": "0m307wfjqg7rrgsxvphggy1vd3l9l58vknjqnc63j02qr0wsw43m", - "depends": ["curl", "GenomicRanges", "httr", "stringi"] + "depends": ["GenomicRanges", "curl", "httr", "stringi"] }, "QuartPAC": { "name": "QuartPAC", "version": "1.36.0", "sha256": "0ha8gv7a6ia4z2z2r7404hngc1sy269hrpj9gdxwhj7hl15nqs30", - "depends": ["Biostrings", "data_table", "GraphPAC", "iPAC", "pwalign", "SpacePAC"] + "depends": ["Biostrings", "GraphPAC", "SpacePAC", "data_table", "iPAC", "pwalign"] }, "QuasR": { "name": "QuasR", "version": "1.44.0", "sha256": "116qnp7d7z4a56fv6n55yzrdlmma9gwrw234nmy8iapkn5ms3xky", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "Rbowtie", "Rhtslib", "Rsamtools", "rtracklayer", "S4Vectors", "ShortRead", "txdbmaker"] + "depends": ["AnnotationDbi", "BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "Rbowtie", "Rhtslib", "Rsamtools", "S4Vectors", "ShortRead", "rtracklayer", "txdbmaker"] }, "QuaternaryProd": { "name": "QuaternaryProd", "version": "1.38.0", "sha256": "0bpx4lliz75jh6d2ngrmjc21577aawrcs7lh1k5pwg94jmj03pmg", - "depends": ["dplyr", "Rcpp", "yaml"] + "depends": ["Rcpp", "dplyr", "yaml"] }, "R3CPET": { "name": "R3CPET", "version": "1.36.0", "sha256": "12gq5mj6vbkd49slhpgnmwfdl65hr4wip9xbqx3j72b0f0yabg1h", - "depends": ["BiocGenerics", "clValid", "data_table", "GenomeInfoDb", "GenomicRanges", "ggbio", "ggplot2", "Hmisc", "igraph", "IRanges", "pheatmap", "Rcpp", "RCurl", "reshape2", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "Hmisc", "IRanges", "RCurl", "Rcpp", "S4Vectors", "clValid", "data_table", "ggbio", "ggplot2", "igraph", "pheatmap", "reshape2"] }, "R453Plus1Toolbox": { "name": "R453Plus1Toolbox", "version": "1.54.0", "sha256": "0x5p028x13hygd1b2l4g2dclm9lnwj1hsh6x58hmkpbx27w68rb9", - "depends": ["Biobase", "BiocGenerics", "biomaRt", "Biostrings", "BSgenome", "GenomicRanges", "IRanges", "pwalign", "R2HTML", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "TeachingDemos", "VariantAnnotation", "xtable", "XVector"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "Biostrings", "GenomicRanges", "IRanges", "R2HTML", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "TeachingDemos", "VariantAnnotation", "XVector", "biomaRt", "pwalign", "xtable"] }, "R4RNA": { "name": "R4RNA", @@ -4627,7 +4639,7 @@ "name": "RAIDS", "version": "1.2.0", "sha256": "0frwaqmbd74gccqj8ibkgkyj1ii7q8qczzmkv9wgi4m0d9m2cy0v", - "depends": ["AnnotationDbi", "AnnotationFilter", "BSgenome", "class", "ensembldb", "gdsfmt", "GENESIS", "GenomicRanges", "IRanges", "MatrixGenerics", "pROC", "rlang", "S4Vectors", "SNPRelate", "VariantAnnotation"] + "depends": ["AnnotationDbi", "AnnotationFilter", "BSgenome", "GENESIS", "GenomicRanges", "IRanges", "MatrixGenerics", "S4Vectors", "SNPRelate", "VariantAnnotation", "class", "ensembldb", "gdsfmt", "pROC", "rlang"] }, "RAREsim": { "name": "RAREsim", @@ -4651,7 +4663,7 @@ "name": "RBioFormats", "version": "1.4.0", "sha256": "1xwazjipv1yrxyx9mny7j7mmc7mvdlrmvjwy8v3i2hfmf137nlj1", - "depends": ["EBImage", "rJava", "S4Vectors"] + "depends": ["EBImage", "S4Vectors", "rJava"] }, "RBioinf": { "name": "RBioinf", @@ -4663,7 +4675,7 @@ "name": "RCAS", "version": "1.30.0", "sha256": "0ll0sj2zyazw0nxbpybq9frmxvmcjkgk3hwp3flnysjxg056dhxg", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "cowplot", "data_table", "DT", "genomation", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "gprofiler2", "IRanges", "knitr", "pbapply", "pheatmap", "plotly", "plotrix", "proxy", "ranger", "rmarkdown", "RSQLite", "rtracklayer", "S4Vectors", "seqLogo", "txdbmaker"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BiocGenerics", "Biostrings", "DT", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "cowplot", "data_table", "genomation", "ggplot2", "gprofiler2", "knitr", "pbapply", "pheatmap", "plotly", "plotrix", "proxy", "ranger", "rmarkdown", "rtracklayer", "seqLogo", "txdbmaker"] }, "RCASPAR": { "name": "RCASPAR", @@ -4675,13 +4687,13 @@ "name": "RCM", "version": "1.20.0", "sha256": "03f8gifzqhc5hdppk4lfybj7p3gkqb5jnpsxpf515dd7c5y210gy", - "depends": ["alabama", "DBI", "edgeR", "ggplot2", "MASS", "nleqslv", "phyloseq", "RColorBrewer", "reshape2", "tensor", "tseries", "VGAM"] + "depends": ["DBI", "MASS", "RColorBrewer", "VGAM", "alabama", "edgeR", "ggplot2", "nleqslv", "phyloseq", "reshape2", "tensor", "tseries"] }, "RCSL": { "name": "RCSL", "version": "1.12.0", "sha256": "1r103i9v8b5w74b3ad7fr25sgsd0xx5kjrxawbwks57dk9k8m272", - "depends": ["ggplot2", "igraph", "MatrixGenerics", "NbClust", "pracma", "Rcpp", "RcppAnnoy", "Rtsne", "SingleCellExperiment", "umap"] + "depends": ["MatrixGenerics", "NbClust", "Rcpp", "RcppAnnoy", "Rtsne", "SingleCellExperiment", "ggplot2", "igraph", "pracma", "umap"] }, "RCX": { "name": "RCX", @@ -4693,13 +4705,13 @@ "name": "RCy3", "version": "2.24.0", "sha256": "03zmskcb8n87x6m5jlhsh2b0b2qjk91y16fdcj3kz5c1j7zfs18i", - "depends": ["base64enc", "base64url", "BiocGenerics", "fs", "glue", "gplots", "graph", "httr", "IRdisplay", "IRkernel", "RColorBrewer", "RCurl", "RJSONIO", "stringi", "uuid", "XML"] + "depends": ["BiocGenerics", "IRdisplay", "IRkernel", "RColorBrewer", "RCurl", "RJSONIO", "XML", "base64enc", "base64url", "fs", "glue", "gplots", "graph", "httr", "stringi", "uuid"] }, "RCyjs": { "name": "RCyjs", "version": "2.26.1", "sha256": "0apqkpcrl7snsaldzranz1sk6zl6vc0rgrdg5h0srkzwdqnx10sh", - "depends": ["base64enc", "BiocGenerics", "BrowserViz", "graph", "httpuv"] + "depends": ["BiocGenerics", "BrowserViz", "base64enc", "graph", "httpuv"] }, "RDRToolbox": { "name": "RDRToolbox", @@ -4717,25 +4729,25 @@ "name": "REDseq", "version": "1.50.0", "sha256": "15lx6sjw8rm0lrvyjfq3n4nq0r6rlgwvnm6bafd86a1dii934gf8", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "BSgenome", "BSgenome_Celegans_UCSC_ce2", "ChIPpeakAnno", "IRanges", "multtest"] + "depends": ["AnnotationDbi", "BSgenome", "BSgenome_Celegans_UCSC_ce2", "BiocGenerics", "Biostrings", "ChIPpeakAnno", "IRanges", "multtest"] }, "REMP": { "name": "REMP", "version": "1.28.0", "sha256": "1ss4170nxif8942095nk5lv1knqf082i4nlxsr3kyvf8ghqn2gmd", - "depends": ["AnnotationHub", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "caret", "doParallel", "foreach", "GenomeInfoDb", "GenomicRanges", "impute", "IRanges", "iterators", "kernlab", "minfi", "org_Hs_eg_db", "ranger", "readr", "rtracklayer", "S4Vectors", "settings", "SummarizedExperiment"] + "depends": ["AnnotationHub", "BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "caret", "doParallel", "foreach", "impute", "iterators", "kernlab", "minfi", "org_Hs_eg_db", "ranger", "readr", "rtracklayer", "settings"] }, "RESOLVE": { "name": "RESOLVE", "version": "1.6.0", "sha256": "12ax0f3vasppwn5z10fr2mhhaaiyiii5qi3ll4yzsn7qmy02ya52", - "depends": ["Biostrings", "BSgenome", "BSgenome_Hsapiens_1000genomes_hs37d5", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "glmnet", "gridExtra", "IRanges", "lsa", "MutationalPatterns", "nnls", "reshape2", "S4Vectors"] + "depends": ["BSgenome", "BSgenome_Hsapiens_1000genomes_hs37d5", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "MutationalPatterns", "S4Vectors", "data_table", "ggplot2", "glmnet", "gridExtra", "lsa", "nnls", "reshape2"] }, "RGMQL": { "name": "RGMQL", "version": "1.24.0", "sha256": "1p7s17i18ql3b8yvg6pmcz62ql18ncd3hqk0rganmahfbd91idby", - "depends": ["BiocGenerics", "data_table", "dplyr", "GenomicRanges", "glue", "httr", "plyr", "RGMQLlib", "rJava", "rtracklayer", "S4Vectors", "xml2"] + "depends": ["BiocGenerics", "GenomicRanges", "RGMQLlib", "S4Vectors", "data_table", "dplyr", "glue", "httr", "plyr", "rJava", "rtracklayer", "xml2"] }, "RGSEA": { "name": "RGSEA", @@ -4753,7 +4765,7 @@ "name": "RITAN", "version": "1.28.0", "sha256": "1jvwvgdqgxlnccf8k2mc1ihg4nasdqbl0pnm7khw3px39b1bnlzl", - "depends": ["AnnotationFilter", "BgeeDB", "dynamicTreeCut", "EnsDb_Hsapiens_v86", "ensembldb", "GenomicFeatures", "ggplot2", "gplots", "gridExtra", "gsubfn", "hash", "igraph", "knitr", "linkcomm", "MCL", "plotrix", "png", "RColorBrewer", "reshape2", "RITANdata", "sqldf", "STRINGdb"] + "depends": ["AnnotationFilter", "BgeeDB", "EnsDb_Hsapiens_v86", "GenomicFeatures", "MCL", "RColorBrewer", "RITANdata", "STRINGdb", "dynamicTreeCut", "ensembldb", "ggplot2", "gplots", "gridExtra", "gsubfn", "hash", "igraph", "knitr", "linkcomm", "plotrix", "png", "reshape2", "sqldf"] }, "RIVER": { "name": "RIVER", @@ -4765,13 +4777,13 @@ "name": "RImmPort", "version": "1.32.0", "sha256": "0kvl9ivf0y7wjkaj7a5qbn9hv9ghbl00xm55i30p4vsvk8q32h3s", - "depends": ["data_table", "DBI", "dplyr", "plyr", "reshape2", "RSQLite", "sqldf"] + "depends": ["DBI", "RSQLite", "data_table", "dplyr", "plyr", "reshape2", "sqldf"] }, "RJMCMCNucleosomes": { "name": "RJMCMCNucleosomes", "version": "1.28.0", "sha256": "0w9d61zd6g3c8dp9i68nw8rmbnrf6lfa86m9a7ydkf54w7p33fsk", - "depends": ["BiocGenerics", "BiocParallel", "consensusSeekeR", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "S4Vectors", "consensusSeekeR"] }, "RLMM": { "name": "RLMM", @@ -4783,19 +4795,19 @@ "name": "RLassoCox", "version": "1.12.0", "sha256": "14zw0xnssh17c6v4qy3b81qrv453r2ayjnq62d1ix695xl7q2g43", - "depends": ["glmnet", "igraph", "Matrix", "survival"] + "depends": ["Matrix", "glmnet", "igraph", "survival"] }, "RMassBank": { "name": "RMassBank", "version": "3.14.0", "sha256": "05ymkjk6hkilm4wn7qn6dh1gf4pxp3zk339fbi10jri8ar0ilbls", - "depends": ["assertthat", "Biobase", "ChemmineOB", "ChemmineR", "data_table", "digest", "enviPat", "glue", "httr", "logger", "MSnbase", "mzR", "R_utils", "rcdk", "Rcpp", "readJDX", "rjson", "S4Vectors", "webchem", "XML", "yaml"] + "depends": ["Biobase", "ChemmineOB", "ChemmineR", "MSnbase", "R_utils", "Rcpp", "S4Vectors", "XML", "assertthat", "data_table", "digest", "enviPat", "glue", "httr", "logger", "mzR", "rcdk", "readJDX", "rjson", "webchem", "yaml"] }, "RNAAgeCalc": { "name": "RNAAgeCalc", "version": "1.16.0", "sha256": "1h221flwa8b4dchw3b65cx7z11744cljzimqc2pv991dp21bvhnk", - "depends": ["AnnotationDbi", "ggplot2", "impute", "org_Hs_eg_db", "recount", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "SummarizedExperiment", "ggplot2", "impute", "org_Hs_eg_db", "recount"] }, "RNASeqPower": { "name": "RNASeqPower", @@ -4807,19 +4819,19 @@ "name": "RNAdecay", "version": "1.24.0", "sha256": "1bf0mgj1n38wqapabbw9d74s5099sqlpkhb9yd9p8w48hwfdk4nc", - "depends": ["ggplot2", "gplots", "nloptr", "scales", "TMB"] + "depends": ["TMB", "ggplot2", "gplots", "nloptr", "scales"] }, "RNAinteract": { "name": "RNAinteract", "version": "1.52.0", "sha256": "18jxg1wxa4z8ik9g7q3rr6mijrl1vk4b7wnkxs5pll6qz97mh726", - "depends": ["abind", "Biobase", "cellHTS2", "geneplotter", "gplots", "hwriter", "ICS", "ICSNP", "lattice", "latticeExtra", "limma", "locfit", "RColorBrewer", "splots"] + "depends": ["Biobase", "ICS", "ICSNP", "RColorBrewer", "abind", "cellHTS2", "geneplotter", "gplots", "hwriter", "lattice", "latticeExtra", "limma", "locfit", "splots"] }, "RNAmodR": { "name": "RNAmodR", "version": "1.18.0", "sha256": "0c4ndc7r3rpk8gmd0n4n5q0x72cz3ja48sq4w3w9ahn05l9qql2v", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "colorRamps", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "Gviz", "IRanges", "matrixStats", "Modstrings", "RColorBrewer", "reshape2", "ROCR", "Rsamtools", "rtracklayer", "S4Vectors", "txdbmaker"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "Modstrings", "RColorBrewer", "ROCR", "Rsamtools", "S4Vectors", "colorRamps", "ggplot2", "matrixStats", "reshape2", "rtracklayer", "txdbmaker"] }, "RNAmodR_AlkAnilineSeq": { "name": "RNAmodR.AlkAnilineSeq", @@ -4831,7 +4843,7 @@ "name": "RNAmodR.ML", "version": "1.18.0", "sha256": "1xcpjq8w81gw52fjb5ijdlf2k94qwqf6s6c8h6y6rja1csqpkn9i", - "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "ranger", "RNAmodR", "S4Vectors"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "RNAmodR", "S4Vectors", "ranger"] }, "RNAmodR_RiboMethSeq": { "name": "RNAmodR.RiboMethSeq", @@ -4843,7 +4855,7 @@ "name": "RNAsense", "version": "1.18.0", "sha256": "1ynaylwxb1vcwx5g14sw1lz6sidnbhc0gb4z3i8gz1yr32mpnmgl", - "depends": ["ggplot2", "NBPSeq", "qvalue", "SummarizedExperiment"] + "depends": ["NBPSeq", "SummarizedExperiment", "ggplot2", "qvalue"] }, "RNAseqCovarImpute": { "name": "RNAseqCovarImpute", @@ -4861,7 +4873,7 @@ "name": "ROCpAI", "version": "1.16.0", "sha256": "1nisrspdl4m6q9hpxhd49dxhfsi27znh4alcvc7gbhlqmbi0q9cs", - "depends": ["boot", "fission", "knitr", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "boot", "fission", "knitr"] }, "ROSeq": { "name": "ROSeq", @@ -4879,13 +4891,13 @@ "name": "ROntoTools", "version": "2.32.0", "sha256": "0idclyk1dwpmfksf9l9ms4nwpin1flw50bafxa0pqlh9fdj5bz0z", - "depends": ["boot", "graph", "KEGGgraph", "KEGGREST", "Rgraphviz"] + "depends": ["KEGGREST", "KEGGgraph", "Rgraphviz", "boot", "graph"] }, "RPA": { "name": "RPA", "version": "1.60.0", "sha256": "0v1jkny311ba43fz7x4i94ddm5hq9281gfj6wkr3disdbxjqgj37", - "depends": ["affy", "BiocGenerics", "BiocStyle", "phyloseq", "rmarkdown"] + "depends": ["BiocGenerics", "BiocStyle", "affy", "phyloseq", "rmarkdown"] }, "RProtoBufLib": { "name": "RProtoBufLib", @@ -4915,25 +4927,25 @@ "name": "RTCA", "version": "1.56.0", "sha256": "078bh47vfkr5a0qvhnjadjzd0ph3pg32dv1r3ssvz9fq8qg4g0hy", - "depends": ["Biobase", "gtools", "RColorBrewer"] + "depends": ["Biobase", "RColorBrewer", "gtools"] }, "RTCGA": { "name": "RTCGA", "version": "1.34.0", "sha256": "1a967id4anjzpdlbdd8a85fvb1z7mcr759pr91aashv12bzzhnk0", - "depends": ["assertthat", "data_table", "dplyr", "ggplot2", "ggthemes", "htmltools", "knitr", "purrr", "RCurl", "rmarkdown", "rvest", "scales", "stringi", "survival", "survminer", "viridis", "XML", "xml2"] + "depends": ["RCurl", "XML", "assertthat", "data_table", "dplyr", "ggplot2", "ggthemes", "htmltools", "knitr", "purrr", "rmarkdown", "rvest", "scales", "stringi", "survival", "survminer", "viridis", "xml2"] }, "RTCGAToolbox": { "name": "RTCGAToolbox", "version": "2.34.0", "sha256": "0l4idk6gsrnm7laj1xkm6jwmyy5l90kphm21zk7y33cpnp2ryjwr", - "depends": ["BiocGenerics", "data_table", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "httr", "RaggedExperiment", "RCurl", "RJSONIO", "rvest", "S4Vectors", "stringr", "SummarizedExperiment", "TCGAutils"] + "depends": ["BiocGenerics", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "RCurl", "RJSONIO", "RaggedExperiment", "S4Vectors", "SummarizedExperiment", "TCGAutils", "data_table", "httr", "rvest", "stringr"] }, "RTN": { "name": "RTN", "version": "2.28.0", "sha256": "09zd8z3wn26r7bamzq17slamydr73aqlx94zi0273npfggcwv4n1", - "depends": ["car", "data_table", "igraph", "IRanges", "limma", "minet", "mixtools", "pheatmap", "pwr", "RedeR", "S4Vectors", "snow", "SummarizedExperiment", "viper"] + "depends": ["IRanges", "RedeR", "S4Vectors", "SummarizedExperiment", "car", "data_table", "igraph", "limma", "minet", "mixtools", "pheatmap", "pwr", "snow", "viper"] }, "RTNduals": { "name": "RTNduals", @@ -4945,7 +4957,7 @@ "name": "RTNsurvival", "version": "1.28.0", "sha256": "1545jbis4gpcggw320kkrh7s2dllw4rwpq0qc95zm9v9yjxzzzk6", - "depends": ["data_table", "dunn_test", "egg", "ggplot2", "pheatmap", "RColorBrewer", "RTN", "RTNduals", "scales", "survival"] + "depends": ["RColorBrewer", "RTN", "RTNduals", "data_table", "dunn_test", "egg", "ggplot2", "pheatmap", "scales", "survival"] }, "RTopper": { "name": "RTopper", @@ -4957,13 +4969,13 @@ "name": "RUVSeq", "version": "1.38.0", "sha256": "0i91kjwransy6l217rmxfzfchb43h1sjk8ygf0y8a3rv6rp7ylfd", - "depends": ["Biobase", "EDASeq", "edgeR", "MASS"] + "depends": ["Biobase", "EDASeq", "MASS", "edgeR"] }, "RUVcorr": { "name": "RUVcorr", "version": "1.36.0", "sha256": "05fga28l65h21b84pn6gn6vrgglnvpblmrz551qj2djrmzda3pn1", - "depends": ["BiocParallel", "bladderbatch", "corrplot", "gridExtra", "lattice", "MASS", "psych", "reshape2", "snowfall"] + "depends": ["BiocParallel", "MASS", "bladderbatch", "corrplot", "gridExtra", "lattice", "psych", "reshape2", "snowfall"] }, "RUVnormalize": { "name": "RUVnormalize", @@ -4975,37 +4987,37 @@ "name": "RVS", "version": "1.26.0", "sha256": "10j84lhap7c74scar3gmk983zi6lhl8zvawp9ap46qf8wrpnqp4k", - "depends": ["GENLIB", "gRain", "kinship2", "R_utils", "snpStats"] + "depends": ["GENLIB", "R_utils", "gRain", "kinship2", "snpStats"] }, "RadioGx": { "name": "RadioGx", "version": "2.8.0", "sha256": "0ykw5hm48fh6xqxdfgmjjbqdd5hp4dmhnykg3zkmb9wrcfp4zx7f", - "depends": ["assertthat", "Biobase", "BiocGenerics", "BiocParallel", "caTools", "CoreGx", "data_table", "downloader", "magicaxis", "matrixStats", "RColorBrewer", "reshape2", "S4Vectors", "scales", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "CoreGx", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "assertthat", "caTools", "data_table", "downloader", "magicaxis", "matrixStats", "reshape2", "scales"] }, "RaggedExperiment": { "name": "RaggedExperiment", - "version": "1.28.0", - "sha256": "1mzjc52naf6brffv6d2bak16y3ygz9lsk8yqgcfa44180bslz3xx", + "version": "1.28.1", + "sha256": "0xfg88r5nh0qswsfc3mm595jmf2w8s2dr032apd15b3kc40hjlr9", "depends": ["BiocBaseUtils", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "S4Vectors", "SummarizedExperiment"] }, "RankProd": { "name": "RankProd", "version": "3.30.0", "sha256": "0y9c833zn3l4492cl7b71x5g7q6kr81zh2f3v9x4l52q6mw6l5qh", - "depends": ["gmp", "Rmpfr"] + "depends": ["Rmpfr", "gmp"] }, "RareVariantVis": { "name": "RareVariantVis", "version": "2.32.0", "sha256": "08siw7yzx1jd3cgg2mirc27ycpk6wdvv4vcwzln1ps35nkhy52in", - "depends": ["BiocGenerics", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GenomicScores", "googleVis", "gtools", "IRanges", "phastCons100way_UCSC_hg19", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GenomicScores", "IRanges", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation", "googleVis", "gtools", "phastCons100way_UCSC_hg19"] }, "Rarr": { "name": "Rarr", "version": "1.4.0", "sha256": "0ks576wqzywlk07wlb116sjzs1b1103mwrd5410qya13mwq6yx62", - "depends": ["httr", "jsonlite", "paws_storage", "R_utils", "stringr"] + "depends": ["R_utils", "httr", "jsonlite", "paws_storage", "stringr"] }, "RbcBook1": { "name": "RbcBook1", @@ -5017,7 +5029,7 @@ "name": "Rbec", "version": "1.12.0", "sha256": "1cf5g2q8ak45ipb0cvgnrqy4s131g9lnchzs6g7mfj7b6ynkgp6d", - "depends": ["dada2", "doParallel", "foreach", "ggplot2", "Rcpp", "readr"] + "depends": ["Rcpp", "dada2", "doParallel", "foreach", "ggplot2", "readr"] }, "Rbowtie": { "name": "Rbowtie", @@ -5029,7 +5041,7 @@ "name": "Rbowtie2", "version": "2.10.0", "sha256": "1spwpbx1jjfjcxbwjkl64ccp9k8xs6lm828546qddsgp20y3bhgp", - "depends": ["magrittr", "Rsamtools"] + "depends": ["Rsamtools", "magrittr"] }, "Rbwa": { "name": "Rbwa", @@ -5041,7 +5053,7 @@ "name": "RcisTarget", "version": "1.24.0", "sha256": "1856jnvqacr12j5hnnl4w2abjjd7qvkz7cs8yhbnqpy1896wki0v", - "depends": ["arrow", "AUCell", "BiocGenerics", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "GSEABase", "R_utils", "S4Vectors", "SummarizedExperiment", "tibble", "zoo"] + "depends": ["AUCell", "BiocGenerics", "GSEABase", "GenomeInfoDb", "GenomicRanges", "R_utils", "S4Vectors", "SummarizedExperiment", "arrow", "data_table", "dplyr", "tibble", "zoo"] }, "Rcollectl": { "name": "Rcollectl", @@ -5051,21 +5063,21 @@ }, "Rcpi": { "name": "Rcpi", - "version": "1.40.0", - "sha256": "1zi7fsq02cac60z92nan9374b2l07qx2fa7jrcngs0xgjcw6k31n", - "depends": ["Biostrings", "doParallel", "foreach", "GOSemSim", "pwalign", "RCurl", "rjson", "rlang"] + "version": "1.40.1", + "sha256": "01p3z2ylkxvcyrzd9yizw2niw3fv3kn30is4cniy6r68qhm1msxy", + "depends": ["Biostrings", "GOSemSim", "curl", "doParallel", "foreach", "httr2", "rjson", "rlang"] }, "Rcwl": { "name": "Rcwl", "version": "1.20.0", "sha256": "02pxjcf3bbvv4hh2vr796b3pyd8vxh5v4g2bkgicsc0jw40554rr", - "depends": ["basilisk", "batchtools", "BiocParallel", "codetools", "DiagrammeR", "R_utils", "S4Vectors", "shiny", "yaml"] + "depends": ["BiocParallel", "DiagrammeR", "R_utils", "S4Vectors", "basilisk", "batchtools", "codetools", "shiny", "yaml"] }, "RcwlPipelines": { "name": "RcwlPipelines", "version": "1.20.0", "sha256": "1bivrgd9f431spg0gv1achs258rmyxcnggn7zh63z2nlskxx3pp1", - "depends": ["BiocFileCache", "git2r", "httr", "rappdirs", "Rcwl", "S4Vectors"] + "depends": ["BiocFileCache", "Rcwl", "S4Vectors", "git2r", "httr", "rappdirs"] }, "Rdisop": { "name": "Rdisop", @@ -5077,7 +5089,7 @@ "name": "ReUseData", "version": "1.4.0", "sha256": "1dai0mxsnjmr6gs465mljfnydai276i5zjjbgxphgas1z3iv9sz6", - "depends": ["basilisk", "BiocFileCache", "jsonlite", "Rcwl", "RcwlPipelines", "S4Vectors", "yaml"] + "depends": ["BiocFileCache", "Rcwl", "RcwlPipelines", "S4Vectors", "basilisk", "jsonlite", "yaml"] }, "ReactomeContentService4R": { "name": "ReactomeContentService4R", @@ -5089,13 +5101,13 @@ "name": "ReactomeGSA", "version": "1.18.0", "sha256": "188c0vrbq01gy4zhsf9wsg9amjf9434g0fzf3lnwzxdm0xzw2b33", - "depends": ["Biobase", "dplyr", "ggplot2", "gplots", "httr", "jsonlite", "progress", "RColorBrewer", "tidyr"] + "depends": ["Biobase", "RColorBrewer", "dplyr", "ggplot2", "gplots", "httr", "jsonlite", "progress", "tidyr"] }, "ReactomeGraph4R": { "name": "ReactomeGraph4R", "version": "1.12.0", "sha256": "17xkrqyp5wdsdd0gpplsk3qfsr8sgf1ap0vz6v34xlhbmzdq3rs8", - "depends": ["data_table", "doParallel", "foreach", "getPass", "jsonlite", "magrittr", "neo4r", "purrr", "ReactomeContentService4R", "rlang"] + "depends": ["ReactomeContentService4R", "data_table", "doParallel", "foreach", "getPass", "jsonlite", "magrittr", "neo4r", "purrr", "rlang"] }, "ReactomePA": { "name": "ReactomePA", @@ -5125,49 +5137,49 @@ "name": "RegEnrich", "version": "1.14.0", "sha256": "1gma0xsw72pi3shxlnvx3ynkvys2hv3g95gx2x0whdsarxwki34h", - "depends": ["BiocParallel", "BiocSet", "BiocStyle", "DESeq2", "DOSE", "dplyr", "fgsea", "ggplot2", "limma", "magrittr", "randomForest", "reshape2", "S4Vectors", "SummarizedExperiment", "tibble", "WGCNA"] + "depends": ["BiocParallel", "BiocSet", "BiocStyle", "DESeq2", "DOSE", "S4Vectors", "SummarizedExperiment", "WGCNA", "dplyr", "fgsea", "ggplot2", "limma", "magrittr", "randomForest", "reshape2", "tibble"] }, "RegionalST": { "name": "RegionalST", "version": "1.2.0", "sha256": "0gzc1m6ds6bnkq26bpq9i0mbpyw2biwnn07d30cdzipfsxbjdhlk", - "depends": ["assertthat", "BayesSpace", "colorspace", "dplyr", "fgsea", "ggplot2", "gridExtra", "magrittr", "RColorBrewer", "S4Vectors", "scater", "Seurat", "shiny", "SingleCellExperiment", "SummarizedExperiment", "tibble", "TOAST"] + "depends": ["BayesSpace", "RColorBrewer", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "TOAST", "assertthat", "colorspace", "dplyr", "fgsea", "ggplot2", "gridExtra", "magrittr", "scater", "shiny", "tibble"] }, "RepViz": { "name": "RepViz", "version": "1.20.0", "sha256": "1rww94wdpswy27i26zn25g8j2s1l14xmljhkz6fl45jmkfn4cqxa", - "depends": ["biomaRt", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "biomaRt"] }, "Repitools": { "name": "Repitools", "version": "1.50.0", "sha256": "1ypiiwi7kp5j8ayz3c9b1gzsy7kd1iw3zv35hrg7pb5fry63dg9g", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "cluster", "DNAcopy", "edgeR", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "gplots", "gsmoothr", "IRanges", "MASS", "Rsamtools", "Rsolnp", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "DNAcopy", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "Rsamtools", "Rsolnp", "S4Vectors", "cluster", "edgeR", "gplots", "gsmoothr", "rtracklayer"] }, "ReportingTools": { "name": "ReportingTools", "version": "2.44.0", "sha256": "0vq46dj2v3imjmf6cw8mab6k9v4rrc5r2vh100jjlsm3z15gvl17", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "Category", "DESeq2", "edgeR", "ggbio", "ggplot2", "GOstats", "GSEABase", "hwriter", "IRanges", "knitr", "lattice", "limma", "PFAM_db", "R_utils", "XML"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "Category", "DESeq2", "GOstats", "GSEABase", "IRanges", "PFAM_db", "R_utils", "XML", "annotate", "edgeR", "ggbio", "ggplot2", "hwriter", "knitr", "lattice", "limma"] }, "ResidualMatrix": { "name": "ResidualMatrix", - "version": "1.14.0", - "sha256": "1q27zzl570q22nk4xjpnpa674p76hzzvilynx9i6awnzs10zjggn", + "version": "1.14.1", + "sha256": "1zq75i20kv0lgnh19zbhw5khxrag627ynqjvh3rj5kxbhj1l2z7c", "depends": ["DelayedArray", "Matrix", "S4Vectors"] }, "Rfastp": { "name": "Rfastp", "version": "1.14.0", "sha256": "1zk2zm08nv8i9q39s7dbppd3pk5kxki17x00971wwsfvl261hnsy", - "depends": ["ggplot2", "Rcpp", "reshape2", "Rhtslib", "rjson", "zlibbioc"] + "depends": ["Rcpp", "Rhtslib", "ggplot2", "reshape2", "rjson", "zlibbioc"] }, "RgnTX": { "name": "RgnTX", "version": "1.6.0", "sha256": "15mw5j8wjbzygqj1v5pqh0dz6n37y55p08yi884hpw7sn9dwkfsw", - "depends": ["GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "regioneR", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene"] + "depends": ["GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "ggplot2", "regioneR"] }, "Rgraphviz": { "name": "Rgraphviz", @@ -5197,19 +5209,19 @@ "name": "RiboCrypt", "version": "1.10.0", "sha256": "0ay8yl1fc4iizina4aqvyjr6iqpc7dr457l7w4p3849d3i160304", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "bslib", "data_table", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "htmlwidgets", "httr", "IRanges", "jsonlite", "knitr", "markdown", "NGLVieweR", "ORFik", "plotly", "RCurl", "rlang", "shiny", "shinycssloaders", "shinyhelper", "shinyjqui", "stringr"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "NGLVieweR", "ORFik", "RCurl", "bslib", "data_table", "dplyr", "ggplot2", "htmlwidgets", "httr", "jsonlite", "knitr", "markdown", "plotly", "rlang", "shiny", "shinycssloaders", "shinyhelper", "shinyjqui", "stringr"] }, "RiboDiPA": { "name": "RiboDiPA", "version": "1.12.0", "sha256": "0an2hbjzi514kb0m4l8i46w4zyxp510vw2f3xdmldjdyv5yw4v1z", - "depends": ["BiocFileCache", "BiocGenerics", "data_table", "DESeq2", "doParallel", "elitism", "foreach", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "matrixStats", "qvalue", "Rcpp", "reldist", "Rsamtools", "S4Vectors", "txdbmaker"] + "depends": ["BiocFileCache", "BiocGenerics", "DESeq2", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rcpp", "Rsamtools", "S4Vectors", "data_table", "doParallel", "elitism", "foreach", "ggplot2", "matrixStats", "qvalue", "reldist", "txdbmaker"] }, "RiboProfiling": { "name": "RiboProfiling", "version": "1.34.0", "sha256": "0h0sxmg4knsarh7w7dnp539cs9sfxjw4413q1yyyz3gbi23bzww4", - "depends": ["BiocGenerics", "Biostrings", "data_table", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "IRanges", "plyr", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors", "sqldf"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "data_table", "ggbio", "ggplot2", "plyr", "reshape2", "rtracklayer", "sqldf"] }, "Rmagpie": { "name": "Rmagpie", @@ -5221,43 +5233,43 @@ "name": "Rmmquant", "version": "1.22.0", "sha256": "1jshnr4xph4glrk0pl3r8pklxnzg495m74yx25xjqg8avwahwvw4", - "depends": ["apeglm", "BiocStyle", "DESeq2", "devtools", "GenomicRanges", "org_Mm_eg_db", "Rcpp", "S4Vectors", "SummarizedExperiment", "TBX20BamSubset", "TxDb_Mmusculus_UCSC_mm9_knownGene"] + "depends": ["BiocStyle", "DESeq2", "GenomicRanges", "Rcpp", "S4Vectors", "SummarizedExperiment", "TBX20BamSubset", "TxDb_Mmusculus_UCSC_mm9_knownGene", "apeglm", "devtools", "org_Mm_eg_db"] }, "RnBeads": { "name": "RnBeads", "version": "2.22.0", "sha256": "0v7dzmbyskq0vmja09dncg1g50dl3iycg883swb7lfvi4xzr42vj", - "depends": ["BiocGenerics", "cluster", "ff", "fields", "GenomicRanges", "ggplot2", "gplots", "gridExtra", "illuminaio", "IRanges", "limma", "MASS", "matrixStats", "methylumi", "plyr", "S4Vectors"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "cluster", "ff", "fields", "ggplot2", "gplots", "gridExtra", "illuminaio", "limma", "matrixStats", "methylumi", "plyr"] }, "RnaSeqSampleSize": { "name": "RnaSeqSampleSize", "version": "2.14.0", "sha256": "0zfmrpfnz8bka6z4408bl5mzv1yr7648qizy8b93qc903vx3zhvs", - "depends": ["biomaRt", "dplyr", "edgeR", "ggplot2", "ggpubr", "heatmap3", "KEGGREST", "matlab", "Rcpp", "recount", "RnaSeqSampleSizeData", "SummarizedExperiment", "tidyr", "tidyselect"] + "depends": ["KEGGREST", "Rcpp", "RnaSeqSampleSizeData", "SummarizedExperiment", "biomaRt", "dplyr", "edgeR", "ggplot2", "ggpubr", "heatmap3", "matlab", "recount", "tidyr", "tidyselect"] }, "Rnits": { "name": "Rnits", "version": "1.38.0", "sha256": "1c4l6flfyamnjhb3givw4icx6cbl2pnrvscalrywyhxpqk64cirv", - "depends": ["affy", "Biobase", "boot", "ggplot2", "impute", "limma", "qvalue", "reshape2"] + "depends": ["Biobase", "affy", "boot", "ggplot2", "impute", "limma", "qvalue", "reshape2"] }, "RolDE": { "name": "RolDE", "version": "1.8.0", "sha256": "11ishff55z086qgc28vxamc5blfxs95qn758f5cgvf9rfr8h64rz", - "depends": ["doParallel", "doRNG", "foreach", "matrixStats", "nlme", "qvalue", "rngtools", "ROTS", "SummarizedExperiment"] + "depends": ["ROTS", "SummarizedExperiment", "doParallel", "doRNG", "foreach", "matrixStats", "nlme", "qvalue", "rngtools"] }, "Rqc": { "name": "Rqc", "version": "1.38.0", "sha256": "0szd5ygcvpaiwqss8galxzxpslpfh93rk42s865v0qpv0s9v9x0l", - "depends": ["BiocGenerics", "BiocParallel", "BiocStyle", "Biostrings", "biovizBase", "GenomicAlignments", "GenomicFiles", "ggplot2", "IRanges", "knitr", "markdown", "plyr", "Rcpp", "reshape2", "Rsamtools", "S4Vectors", "shiny", "ShortRead"] + "depends": ["BiocGenerics", "BiocParallel", "BiocStyle", "Biostrings", "GenomicAlignments", "GenomicFiles", "IRanges", "Rcpp", "Rsamtools", "S4Vectors", "ShortRead", "biovizBase", "ggplot2", "knitr", "markdown", "plyr", "reshape2", "shiny"] }, "Rsamtools": { "name": "Rsamtools", "version": "2.20.0", "sha256": "04lz0dzwmgi8j9wyspbmjln6yb5fv4f538nqyrfd31d0g16937b8", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "bitops", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rhtslib", "S4Vectors", "XVector", "zlibbioc"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rhtslib", "S4Vectors", "XVector", "bitops", "zlibbioc"] }, "Rsubread": { "name": "Rsubread", @@ -5275,7 +5287,7 @@ "name": "Rtreemix", "version": "1.66.0", "sha256": "0rlhrzpyv95mm9wdqmn2wqqkgb3nm3irqrffba81ip7mn9fmdjsw", - "depends": ["Biobase", "graph", "Hmisc"] + "depends": ["Biobase", "Hmisc", "graph"] }, "Rvisdiff": { "name": "Rvisdiff", @@ -5287,67 +5299,67 @@ "name": "S4Arrays", "version": "1.4.1", "sha256": "0wdzp1q6hyks4afm217yl2n770jsqaqxix71imni1r0qbxdfkdwl", - "depends": ["abind", "BiocGenerics", "crayon", "IRanges", "Matrix", "S4Vectors"] + "depends": ["BiocGenerics", "IRanges", "Matrix", "S4Vectors", "abind", "crayon"] }, "S4Vectors": { "name": "S4Vectors", - "version": "0.42.0", - "sha256": "0aq0j70sl8a42gc1abxdwdy74mi9k4krz56yrbpwqv78x42cjjm9", + "version": "0.42.1", + "sha256": "080fr8f4lqzvn73y50wgz19w0a0hvkd9ilwswmv5gi34sihp8795", "depends": ["BiocGenerics"] }, "SAIGEgds": { "name": "SAIGEgds", - "version": "2.4.0", - "sha256": "1pkg72pqqlmj51vjz5p3qrj3b2lqqnzmh4ddbrn73rs66sgm9zkp", - "depends": ["CompQuadForm", "gdsfmt", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "SeqArray", "survey"] + "version": "2.4.1", + "sha256": "1nzr62hg99z0zzp0y74nis3xxgjsw2qc4w5xcm8p8j9kh9w7rwzk", + "depends": ["CompQuadForm", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "SeqArray", "gdsfmt", "survey"] }, "SARC": { "name": "SARC", "version": "1.2.0", "sha256": "11hiz7lzhkp2459c92x0i9kia7yc8zbl7n7c3wd66g2pbzfjzv6f", - "depends": ["data_table", "DescTools", "GenomicFeatures", "GenomicRanges", "ggplot2", "gridExtra", "gtable", "IRanges", "metap", "multtest", "plotly", "plyranges", "RaggedExperiment", "RColorBrewer", "reshape2", "scales", "tidyverse"] + "depends": ["DescTools", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "RaggedExperiment", "data_table", "ggplot2", "gridExtra", "gtable", "metap", "multtest", "plotly", "plyranges", "reshape2", "scales", "tidyverse"] }, "SBGNview": { "name": "SBGNview", "version": "1.18.0", "sha256": "1smxxwyc03m6bbw1l5bzfl6q2g2f93z53z8iyk42lwkfp26zv6i5", - "depends": ["AnnotationDbi", "bookdown", "httr", "igraph", "KEGGREST", "knitr", "pathview", "Rdpack", "rmarkdown", "rsvg", "SBGNview_data", "SummarizedExperiment", "xml2"] + "depends": ["AnnotationDbi", "KEGGREST", "Rdpack", "SBGNview_data", "SummarizedExperiment", "bookdown", "httr", "igraph", "knitr", "pathview", "rmarkdown", "rsvg", "xml2"] }, "SBMLR": { "name": "SBMLR", "version": "2.0.0", "sha256": "1h0pwlq229hbvh6ab2sjv67zd24i15xn4jh7k8s64faw4gw8ji14", - "depends": ["deSolve", "XML"] + "depends": ["XML", "deSolve"] }, "SC3": { "name": "SC3", "version": "1.32.0", "sha256": "0ylpk7jjqmy7g1s5ah5zwrcmqplhjm0rpnw74kn5mdra3d7xdsnr", - "depends": ["BiocGenerics", "cluster", "doParallel", "doRNG", "e1071", "foreach", "ggplot2", "pheatmap", "Rcpp", "RcppArmadillo", "robustbase", "ROCR", "rrcov", "S4Vectors", "shiny", "SingleCellExperiment", "SummarizedExperiment", "WriteXLS"] + "depends": ["BiocGenerics", "ROCR", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "WriteXLS", "cluster", "doParallel", "doRNG", "e1071", "foreach", "ggplot2", "pheatmap", "robustbase", "rrcov", "shiny"] }, "SCAN_UPC": { "name": "SCAN.UPC", "version": "2.46.0", "sha256": "1awsy1xfsl90yxqc2qir7p51d34jddcqg5q02cc0925w6yqanaci", - "depends": ["affy", "affyio", "Biobase", "Biostrings", "foreach", "GEOquery", "IRanges", "MASS", "oligo", "sva"] + "depends": ["Biobase", "Biostrings", "GEOquery", "IRanges", "MASS", "affy", "affyio", "foreach", "oligo", "sva"] }, "SCANVIS": { "name": "SCANVIS", "version": "1.18.0", "sha256": "0nywyi5bp3qgh9xaydhpsdh5nvq0ybfvjqhygrs7lypanj4n1k7p", - "depends": ["IRanges", "plotrix", "RCurl", "rtracklayer"] + "depends": ["IRanges", "RCurl", "plotrix", "rtracklayer"] }, "SCArray": { "name": "SCArray", "version": "1.12.0", "sha256": "1a5343azhqfagkf2cbszaisn505aqc49hxki42qb92n5x3bgqbnb", - "depends": ["BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "gdsfmt", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "gdsfmt"] }, "SCArray_sat": { "name": "SCArray.sat", "version": "1.4.0", "sha256": "0y94f6rbjzn2jqkww808vysfdk6j3qw81v79w087d3adiywkl9xj", - "depends": ["BiocGenerics", "BiocParallel", "BiocSingular", "DelayedArray", "gdsfmt", "Matrix", "S4Vectors", "SCArray", "Seurat", "SeuratObject", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "BiocSingular", "DelayedArray", "Matrix", "S4Vectors", "SCArray", "Seurat", "SeuratObject", "SummarizedExperiment", "gdsfmt"] }, "SCBN": { "name": "SCBN", @@ -5359,25 +5371,25 @@ "name": "SCFA", "version": "1.14.0", "sha256": "1avbvkky6m5f5cbfbhabapidz6ypngddrkg2dss7y0a7gy48634x", - "depends": ["BiocParallel", "cluster", "coro", "glmnet", "igraph", "Matrix", "matrixStats", "psych", "RhpcBLASctl", "survival", "torch"] + "depends": ["BiocParallel", "Matrix", "RhpcBLASctl", "cluster", "coro", "glmnet", "igraph", "matrixStats", "psych", "survival", "torch"] }, "SCOPE": { "name": "SCOPE", "version": "1.16.0", "sha256": "1x7kad59rav9rrjkqkdfbziflx3bngclz4mwkfkf53yl8km62pw0", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "DescTools", "DNAcopy", "doParallel", "foreach", "GenomeInfoDb", "GenomicRanges", "gplots", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BiocGenerics", "Biostrings", "DNAcopy", "DescTools", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "doParallel", "foreach", "gplots"] }, "SCnorm": { "name": "SCnorm", "version": "1.26.0", "sha256": "11q8g6fmsib4ms2ks003v9qc8n4rzchbcd02xnbah97qgxrmicbm", - "depends": ["BiocGenerics", "BiocParallel", "cluster", "data_table", "forcats", "ggplot2", "moments", "quantreg", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cluster", "data_table", "forcats", "ggplot2", "moments", "quantreg"] }, "SDAMS": { "name": "SDAMS", "version": "1.24.0", "sha256": "088k6bxdmkwv4zw8pvj2f4hl4b5jhrmlnvsh9mcqga7pmf5ir96b", - "depends": ["qvalue", "SummarizedExperiment", "trust"] + "depends": ["SummarizedExperiment", "qvalue", "trust"] }, "SELEX": { "name": "SELEX", @@ -5389,25 +5401,31 @@ "name": "SEtools", "version": "1.18.0", "sha256": "0j4pn85icyf1jwcfjr8r9049lrhglp3s5ighmcp9hvsjws04scis", - "depends": ["BiocParallel", "circlize", "data_table", "DESeq2", "edgeR", "Matrix", "openxlsx", "pheatmap", "S4Vectors", "sechm", "SummarizedExperiment", "sva"] + "depends": ["BiocParallel", "DESeq2", "Matrix", "S4Vectors", "SummarizedExperiment", "circlize", "data_table", "edgeR", "openxlsx", "pheatmap", "sechm", "sva"] + }, + "SGCP": { + "name": "SGCP", + "version": "1.4.1", + "sha256": "0l16002hzn3myadjkdyj1s7l7kql6f3gd8fjm8rklgs8x6pblk8c", + "depends": ["DescTools", "GO_db", "GOstats", "RColorBrewer", "RSpectra", "Rgraphviz", "SummarizedExperiment", "annotate", "caret", "dplyr", "expm", "genefilter", "ggplot2", "ggridges", "graph", "openxlsx", "org_Hs_eg_db", "plyr", "reshape2", "xtable"] }, "SGSeq": { "name": "SGSeq", "version": "1.38.0", "sha256": "1i3dg3fn648mzy49m15vbzr3wfnk91xyph5j4sc7ss978l25h17n", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "igraph", "IRanges", "Rsamtools", "rtracklayer", "RUnit", "S4Vectors", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RUnit", "Rsamtools", "S4Vectors", "SummarizedExperiment", "igraph", "rtracklayer"] }, "SIAMCAT": { "name": "SIAMCAT", "version": "2.8.0", "sha256": "00l9w395fg6r8p2jzz85x1djlj4h7y86dgs8x5xf14bn1am9q0sh", - "depends": ["beanplot", "corrplot", "glmnet", "gridBase", "gridExtra", "infotheo", "lgr", "LiblineaR", "lmerTest", "matrixStats", "mlr3", "mlr3learners", "mlr3tuning", "paradox", "phyloseq", "pROC", "progress", "PRROC", "RColorBrewer", "scales", "stringr"] + "depends": ["LiblineaR", "PRROC", "RColorBrewer", "beanplot", "corrplot", "glmnet", "gridBase", "gridExtra", "infotheo", "lgr", "lmerTest", "matrixStats", "mlr3", "mlr3learners", "mlr3tuning", "pROC", "paradox", "phyloseq", "progress", "scales", "stringr"] }, "SICtools": { "name": "SICtools", "version": "1.34.0", "sha256": "0ymk18aj4r0526xqqkrvd75p4jrgrq2wshx7mqh2wj7nizjfn8fv", - "depends": ["Biostrings", "doParallel", "GenomicRanges", "IRanges", "matrixStats", "plyr", "Rsamtools", "stringr"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "Rsamtools", "doParallel", "matrixStats", "plyr", "stringr"] }, "SIM": { "name": "SIM", @@ -5419,7 +5437,7 @@ "name": "SIMAT", "version": "1.36.0", "sha256": "1gwcr7lfsnzvlx0v93adlxmzdcx9rwfmhacpz3m8q26jm4vjmqib", - "depends": ["ggplot2", "mzR", "Rcpp", "reshape2"] + "depends": ["Rcpp", "ggplot2", "mzR", "reshape2"] }, "SIMD": { "name": "SIMD", @@ -5431,7 +5449,7 @@ "name": "SIMLR", "version": "1.30.0", "sha256": "18mld0yvkmy1znsv3dkch6f8x9h9j20zm3qq84ggw0wsbgrrcm1z", - "depends": ["Matrix", "pracma", "Rcpp", "RcppAnnoy", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppAnnoy", "pracma"] }, "SLqPCR": { "name": "SLqPCR", @@ -5443,13 +5461,13 @@ "name": "SMAD", "version": "1.20.0", "sha256": "0rj4f38nlr3a5fmf0dqhqi7iln78lkvghv4w8yr2kcavnsl4lzar", - "depends": ["dplyr", "magrittr", "Rcpp", "RcppAlgos", "tidyr"] + "depends": ["Rcpp", "RcppAlgos", "dplyr", "magrittr", "tidyr"] }, "SMITE": { "name": "SMITE", "version": "1.32.0", "sha256": "0dp4yas2gdwnvvbxdkid61j9c2a32cfcn3iw9nwijp6aqlv9rrv9", - "depends": ["AnnotationDbi", "Biobase", "BioNet", "geneLenDataBase", "GenomicRanges", "ggplot2", "goseq", "Hmisc", "igraph", "IRanges", "KEGGREST", "org_Hs_eg_db", "plyr", "reactome_db", "S4Vectors", "scales"] + "depends": ["AnnotationDbi", "BioNet", "Biobase", "GenomicRanges", "Hmisc", "IRanges", "KEGGREST", "S4Vectors", "geneLenDataBase", "ggplot2", "goseq", "igraph", "org_Hs_eg_db", "plyr", "reactome_db", "scales"] }, "SNAGEE": { "name": "SNAGEE", @@ -5467,19 +5485,19 @@ "name": "SNPediaR", "version": "1.30.0", "sha256": "1p33fmjdpscc42wicx23xg1jbg2m18msf4rhg9pr52n6yzr42b8v", - "depends": ["jsonlite", "RCurl"] + "depends": ["RCurl", "jsonlite"] }, "SNPhood": { "name": "SNPhood", "version": "1.34.0", "sha256": "1jniag2yq67y6s9cw8722a58k86i0nbksc2dxyv3pni2wwdka6r6", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "checkmate", "cluster", "data_table", "DESeq2", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "lattice", "RColorBrewer", "reshape2", "Rsamtools", "S4Vectors", "scales", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "DESeq2", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "checkmate", "cluster", "data_table", "ggplot2", "gridExtra", "lattice", "reshape2", "scales"] }, "SOMNiBUS": { "name": "SOMNiBUS", "version": "1.12.0", "sha256": "0p33r1ibpnln2rn4ls23prg7nmxznki9x7jc7qg3gc5fxip5b9n6", - "depends": ["annotatr", "BiocManager", "bsseq", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "Matrix", "mgcv", "reshape2", "rtracklayer", "S4Vectors", "tidyr", "VGAM", "yaml"] + "depends": ["BiocManager", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "S4Vectors", "VGAM", "annotatr", "bsseq", "data_table", "ggplot2", "mgcv", "reshape2", "rtracklayer", "tidyr", "yaml"] }, "SPEM": { "name": "SPEM", @@ -5495,57 +5513,63 @@ }, "SPIAT": { "name": "SPIAT", - "version": "1.6.0", - "sha256": "09bs0pm2gd8fgb2q5kihwnb3dgaxkwjxl86di7kdj0im5hyr0d1h", - "depends": ["apcluster", "dbscan", "dittoSeq", "dplyr", "ggplot2", "gridExtra", "gtools", "mmand", "pracma", "RANN", "raster", "reshape2", "rlang", "sp", "SpatialExperiment", "spatstat_explore", "spatstat_geom", "SummarizedExperiment", "tibble", "vroom"] + "version": "1.6.2", + "sha256": "0if22cin355bq5bz8cn56041h8rszg2wf00sljzcac3mv2k1bgs5", + "depends": ["RANN", "SpatialExperiment", "SummarizedExperiment", "apcluster", "dbscan", "dittoSeq", "dplyr", "ggplot2", "gridExtra", "gtools", "mmand", "pracma", "raster", "reshape2", "rlang", "sp", "spatstat_explore", "spatstat_geom", "tibble", "vroom"] }, "SPLINTER": { "name": "SPLINTER", "version": "1.30.0", "sha256": "1x9lak4s7rhllnczr4n7a88haq4a36pmxbrgd2m7v69nyzxlab9w", - "depends": ["biomaRt", "Biostrings", "BSgenome_Mmusculus_UCSC_mm9", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "googleVis", "Gviz", "IRanges", "plyr", "pwalign", "S4Vectors", "seqLogo", "stringr"] + "depends": ["BSgenome_Mmusculus_UCSC_mm9", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "biomaRt", "ggplot2", "googleVis", "plyr", "pwalign", "seqLogo", "stringr"] + }, + "SPONGE": { + "name": "SPONGE", + "version": "1.26.1", + "sha256": "01sfkdd01l78z4p494080pq5f6wa65lp2m9ny5zbls7ibz9jpl48", + "depends": ["Biobase", "ComplexHeatmap", "MASS", "MetBrewer", "biomaRt", "caret", "cvms", "data_table", "doRNG", "dplyr", "expm", "foreach", "gRbase", "ggplot2", "ggpubr", "ggridges", "glmnet", "igraph", "iterators", "logging", "ppcor", "randomForest", "rlang", "stringr", "tidyr", "tidyverse", "tnet"] }, "SPOTlight": { "name": "SPOTlight", "version": "1.8.0", "sha256": "08cnlm6l34gp2spy2x08jr6abm58wrana1930jzwvvgm0mql9nzb", - "depends": ["ggplot2", "Matrix", "matrixStats", "NMF", "nnls", "SingleCellExperiment", "sparseMatrixStats"] + "depends": ["Matrix", "NMF", "SingleCellExperiment", "ggplot2", "matrixStats", "nnls", "sparseMatrixStats"] }, "SPsimSeq": { "name": "SPsimSeq", "version": "1.14.0", "sha256": "09n39bgbx8xkngdc056lz1p20375w7fljmgnkg7vacjvp288y2pi", - "depends": ["edgeR", "fitdistrplus", "Hmisc", "limma", "mvtnorm", "phyloseq", "SingleCellExperiment", "WGCNA"] + "depends": ["Hmisc", "SingleCellExperiment", "WGCNA", "edgeR", "fitdistrplus", "limma", "mvtnorm", "phyloseq"] }, "SQLDataFrame": { "name": "SQLDataFrame", "version": "1.18.0", "sha256": "1fdf6dvrkg5cjnlh9466dnmqjfg7dq7dj06qjc61zyshlvslxlwh", - "depends": ["BiocGenerics", "DBI", "DelayedArray", "duckdb", "RSQLite", "S4Vectors"] + "depends": ["BiocGenerics", "DBI", "DelayedArray", "RSQLite", "S4Vectors", "duckdb"] }, "SRAdb": { "name": "SRAdb", "version": "1.66.0", "sha256": "0qvqixmn8am90a4n5ydva630kkxr735y6kdcikp1q0k8pxxvbm0j", - "depends": ["GEOquery", "graph", "RCurl", "RSQLite"] + "depends": ["GEOquery", "RCurl", "RSQLite", "graph"] }, "STATegRa": { "name": "STATegRa", "version": "1.40.0", "sha256": "1m78hixyjavvryfcyd5g3f898r7hcn1cwdwbv3i2b9yj7z6r7knv", - "depends": ["affy", "Biobase", "calibrate", "edgeR", "foreach", "ggplot2", "gplots", "gridExtra", "limma", "MASS"] + "depends": ["Biobase", "MASS", "affy", "calibrate", "edgeR", "foreach", "ggplot2", "gplots", "gridExtra", "limma"] }, "STRINGdb": { "name": "STRINGdb", "version": "2.16.4", "sha256": "02fim09w9s38hvgp1g3fxqabd5r2fjysljlfrya2nr17drqkzqyx", - "depends": ["gplots", "hash", "httr", "igraph", "plotrix", "plyr", "png", "RColorBrewer", "sqldf"] + "depends": ["RColorBrewer", "gplots", "hash", "httr", "igraph", "plotrix", "plyr", "png", "sqldf"] }, "STdeconvolve": { "name": "STdeconvolve", "version": "1.8.0", "sha256": "0pyyxmh4bnavsdw6riv72y5m8l53mfr0lpiy9mh0qn57rlmw5fr9", - "depends": ["BiocParallel", "clue", "ggplot2", "Matrix", "mgcv", "reshape2", "scatterpie", "slam", "topicmodels", "viridis"] + "depends": ["BiocParallel", "Matrix", "clue", "ggplot2", "mgcv", "reshape2", "scatterpie", "slam", "topicmodels", "viridis"] }, "SUITOR": { "name": "SUITOR", @@ -5557,7 +5581,7 @@ "name": "SVMDO", "version": "1.4.0", "sha256": "11cn7kffgssbjk307vxjr6i2cs94fn6hhz09dbx5qgg89m4gsdgi", - "depends": ["AnnotationDbi", "BSDA", "caret", "caTools", "data_table", "DOSE", "dplyr", "e1071", "golem", "klaR", "nortest", "org_Hs_eg_db", "shiny", "shinyFiles", "shinytitle", "sjmisc", "SummarizedExperiment", "survival"] + "depends": ["AnnotationDbi", "BSDA", "DOSE", "SummarizedExperiment", "caTools", "caret", "data_table", "dplyr", "e1071", "golem", "klaR", "nortest", "org_Hs_eg_db", "shiny", "shinyFiles", "shinytitle", "sjmisc", "survival"] }, "SWATH2stats": { "name": "SWATH2stats", @@ -5575,7 +5599,7 @@ "name": "Scale4C", "version": "1.26.0", "sha256": "1h2swrs0vj9nzcr748jbk8c4bpnyc0gcq8bn5cyhd8lbd2b9xhv0", - "depends": ["GenomicRanges", "IRanges", "smoothie", "SummarizedExperiment"] + "depends": ["GenomicRanges", "IRanges", "SummarizedExperiment", "smoothie"] }, "ScaledMatrix": { "name": "ScaledMatrix", @@ -5587,7 +5611,7 @@ "name": "Sconify", "version": "1.24.0", "sha256": "07bz9bi71qxaipiw998jshm0wcwllhxfjmdxxxwg520rhmfs1g04", - "depends": ["dplyr", "flowCore", "FNN", "ggplot2", "magrittr", "readr", "Rtsne", "tibble"] + "depends": ["FNN", "Rtsne", "dplyr", "flowCore", "ggplot2", "magrittr", "readr", "tibble"] }, "ScreenR": { "name": "ScreenR", @@ -5599,19 +5623,19 @@ "name": "SemDist", "version": "1.38.0", "sha256": "03qzsrxwnsb8spfmnsyiyz83r8476lq17n3a8hrm6i13hxdqps29", - "depends": ["annotate", "AnnotationDbi", "GO_db"] + "depends": ["AnnotationDbi", "GO_db", "annotate"] }, "SeqArray": { "name": "SeqArray", - "version": "1.44.0", - "sha256": "1g8867y66f8ihr0w2shc17wxnavnkwn9y25f850nwvnn9nsbk88k", - "depends": ["Biostrings", "gdsfmt", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "version": "1.44.1", + "sha256": "0b0i17kwa8141y568k2asiv46hz4z0lwiqjz687d96j6kz3r3zgg", + "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "gdsfmt"] }, "SeqGSEA": { "name": "SeqGSEA", "version": "1.44.0", "sha256": "0nxrl5ip289hqnp4g85njm55kpk81kr1l87la6r3r5h0qx5x01cy", - "depends": ["Biobase", "biomaRt", "DESeq2", "doParallel"] + "depends": ["Biobase", "DESeq2", "biomaRt", "doParallel"] }, "SeqGate": { "name": "SeqGate", @@ -5623,13 +5647,13 @@ "name": "SeqSQC", "version": "1.26.0", "sha256": "0xsgr7wfy9qyjffb6spm0szknk3rbcx89k1ypdymybnjmndcslqf", - "depends": ["e1071", "ExperimentHub", "gdsfmt", "GenomicRanges", "GGally", "ggplot2", "IRanges", "plotly", "RColorBrewer", "reshape2", "rmarkdown", "S4Vectors", "SNPRelate"] + "depends": ["ExperimentHub", "GGally", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "SNPRelate", "e1071", "gdsfmt", "ggplot2", "plotly", "reshape2", "rmarkdown"] }, "SeqVarTools": { "name": "SeqVarTools", "version": "1.42.0", "sha256": "1mx3b21595n1v1fhy7lv67kdlxc2qdmkj0lm8gdnrs0l5f88jpgy", - "depends": ["Biobase", "BiocGenerics", "data_table", "gdsfmt", "GenomicRanges", "GWASExactHW", "IRanges", "logistf", "Matrix", "S4Vectors", "SeqArray"] + "depends": ["Biobase", "BiocGenerics", "GWASExactHW", "GenomicRanges", "IRanges", "Matrix", "S4Vectors", "SeqArray", "data_table", "gdsfmt", "logistf"] }, "SharedObject": { "name": "SharedObject", @@ -5641,19 +5665,19 @@ "name": "ShortRead", "version": "1.62.0", "sha256": "0x5iqx2k2xs5rwjch0bpcb8pgc0nhb571991yahdr8hsxwbas3jm", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "hwriter", "IRanges", "lattice", "latticeExtra", "pwalign", "Rhtslib", "Rsamtools", "S4Vectors", "XVector", "zlibbioc"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rhtslib", "Rsamtools", "S4Vectors", "XVector", "hwriter", "lattice", "latticeExtra", "pwalign", "zlibbioc"] }, "SiPSiC": { "name": "SiPSiC", - "version": "1.4.0", - "sha256": "158sjiza9wqd5ipl3fm1gx63qas6j3rqlk6ayw5hnf0al1g64z5q", + "version": "1.4.3", + "sha256": "0h9bd5dcl53m482icwj1yiz3016dy9f54hmqvxn8qjzjhqy9xic2", "depends": ["Matrix", "SingleCellExperiment"] }, "SigCheck": { "name": "SigCheck", "version": "2.36.0", "sha256": "1bnvk2v1mh615xhqab6129bgvv24azq9h9r1n2b3msbadwd0by1d", - "depends": ["Biobase", "BiocParallel", "e1071", "MLInterfaces", "survival"] + "depends": ["Biobase", "BiocParallel", "MLInterfaces", "e1071", "survival"] }, "SigFuge": { "name": "SigFuge", @@ -5665,19 +5689,19 @@ "name": "SigsPack", "version": "1.18.0", "sha256": "1dq3zqbbz5wbw2yf8w1sjgf1kd1nxap808ydvjr63zn10rm6m3vm", - "depends": ["Biobase", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "quadprog", "rtracklayer", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BSgenome", "Biobase", "Biostrings", "GenomeInfoDb", "GenomicRanges", "SummarizedExperiment", "VariantAnnotation", "quadprog", "rtracklayer"] }, "SimBu": { "name": "SimBu", "version": "1.6.0", "sha256": "1may613jla4id0g9w4nxsfqm36ma82gmzykvnifi5hwa63jvi7pb", - "depends": ["basilisk", "BiocParallel", "data_table", "dplyr", "ggplot2", "Matrix", "phyloseq", "proxyC", "RColorBrewer", "RCurl", "reticulate", "sparseMatrixStats", "SummarizedExperiment", "tidyr"] + "depends": ["BiocParallel", "Matrix", "RColorBrewer", "RCurl", "SummarizedExperiment", "basilisk", "data_table", "dplyr", "ggplot2", "phyloseq", "proxyC", "reticulate", "sparseMatrixStats", "tidyr"] }, "SimFFPE": { "name": "SimFFPE", "version": "1.16.0", "sha256": "1ccdk4g16bh1j420dspnh6il98j6ck6w2vgmqi82mf6js3cakd2z", - "depends": ["Biostrings", "doParallel", "dplyr", "foreach", "GenomicRanges", "IRanges", "Rsamtools", "truncnorm"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "Rsamtools", "doParallel", "dplyr", "foreach", "truncnorm"] }, "SingleCellAlleleExperiment": { "name": "SingleCellAlleleExperiment", @@ -5695,31 +5719,31 @@ "name": "SingleCellSignalR", "version": "1.16.0", "sha256": "0w7zj2fb45hzjx44kgn9qs3ab69v29vpl41nxvy931m32ndl5j04", - "depends": ["BiocManager", "circlize", "data_table", "edgeR", "foreach", "gplots", "igraph", "limma", "multtest", "pheatmap", "Rtsne", "scran", "stringr"] + "depends": ["BiocManager", "Rtsne", "circlize", "data_table", "edgeR", "foreach", "gplots", "igraph", "limma", "multtest", "pheatmap", "scran", "stringr"] }, "SingleMoleculeFootprinting": { "name": "SingleMoleculeFootprinting", "version": "1.12.0", "sha256": "1hyqnzz05f2i0r2b5qs1j58py3b042aiffyd6ns2hkrgnr62yldw", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "data_table", "GenomeInfoDb", "GenomicRanges", "IRanges", "plyr", "QuasR", "RColorBrewer"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "QuasR", "RColorBrewer", "data_table", "plyr"] }, "SingleR": { "name": "SingleR", "version": "2.6.0", "sha256": "0l33bsi1zfj7f4hzlivhh89phhx0qscrwd08c28mqvcyp91mhq16", - "depends": ["beachmat", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "Rcpp", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "Rcpp", "S4Vectors", "SummarizedExperiment", "beachmat"] }, "SomaticSignatures": { "name": "SomaticSignatures", "version": "2.40.0", "sha256": "0yvn2famnyxkxnw4r1vr0vma6ym9kb343vqgaqkvcp3zpm1fi0p8", - "depends": ["Biobase", "Biostrings", "GenomeInfoDb", "GenomicRanges", "ggbio", "ggplot2", "IRanges", "NMF", "pcaMethods", "proxy", "reshape2", "S4Vectors", "VariantAnnotation"] + "depends": ["Biobase", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "NMF", "S4Vectors", "VariantAnnotation", "ggbio", "ggplot2", "pcaMethods", "proxy", "reshape2"] }, "SpaceMarkers": { "name": "SpaceMarkers", "version": "1.0.0", "sha256": "02pb6jka0irzxmw0bzjns7jfc9jbbslg3c1xxjq1v9zf3s3is21a", - "depends": ["ape", "hdf5r", "jsonlite", "Matrix", "matrixStats", "matrixTests", "qvalue", "rstatix", "spatstat_explore", "spatstat_geom"] + "depends": ["Matrix", "ape", "hdf5r", "jsonlite", "matrixStats", "matrixTests", "qvalue", "rstatix", "spatstat_explore", "spatstat_geom"] }, "SpacePAC": { "name": "SpacePAC", @@ -5731,73 +5755,73 @@ "name": "Spaniel", "version": "1.18.0", "sha256": "03iil9iyvv9sqmkpi3hn1vqx7a2187h1ng7bzfs302dj9dpcqfaj", - "depends": ["dplyr", "DropletUtils", "ggplot2", "igraph", "jpeg", "jsonlite", "magrittr", "png", "S4Vectors", "scater", "scran", "Seurat", "shiny", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DropletUtils", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "igraph", "jpeg", "jsonlite", "magrittr", "png", "scater", "scran", "shiny"] }, "SparseArray": { "name": "SparseArray", "version": "1.4.8", "sha256": "1ahwv6ih1700h1sccv9wh7hr5bhdif0ji5jbmsprnhjxfgn6xidm", - "depends": ["BiocGenerics", "IRanges", "Matrix", "MatrixGenerics", "matrixStats", "S4Arrays", "S4Vectors", "XVector"] + "depends": ["BiocGenerics", "IRanges", "Matrix", "MatrixGenerics", "S4Arrays", "S4Vectors", "XVector", "matrixStats"] }, "SparseSignatures": { "name": "SparseSignatures", "version": "2.14.0", "sha256": "1wq1vs94pw2zb896pn6z1zk67adrqwlhrcy1sp3s3m9jw0yaiqbw", - "depends": ["Biostrings", "BSgenome", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "NMF", "nnlasso", "nnls", "reshape2"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "NMF", "data_table", "ggplot2", "gridExtra", "nnlasso", "nnls", "reshape2"] }, "SpatialCPie": { "name": "SpatialCPie", "version": "1.20.0", "sha256": "0pj6m66a1qw3hi37qa4k7gpl1b8r731v9wflzr0q1yw9gwl99nh8", - "depends": ["colorspace", "data_table", "digest", "dplyr", "ggforce", "ggiraph", "ggplot2", "ggrepel", "igraph", "lpSolve", "purrr", "readr", "rlang", "shiny", "shinycssloaders", "shinyjs", "shinyWidgets", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "zeallot"] + "depends": ["SummarizedExperiment", "colorspace", "data_table", "digest", "dplyr", "ggforce", "ggiraph", "ggplot2", "ggrepel", "igraph", "lpSolve", "purrr", "readr", "rlang", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs", "tibble", "tidyr", "tidyselect", "zeallot"] }, "SpatialDecon": { "name": "SpatialDecon", "version": "1.14.0", "sha256": "0p49dwp380d642xkx92wlan70crb3jinsiawnkiif6i6ry7xdxjd", - "depends": ["Biobase", "GeomxTools", "logNormReg", "Matrix", "repmis", "SeuratObject"] + "depends": ["Biobase", "GeomxTools", "Matrix", "SeuratObject", "logNormReg", "repmis"] }, "SpatialExperiment": { "name": "SpatialExperiment", "version": "1.14.0", "sha256": "0f04azs6wscibcpbmc1m21wjswmgr2b8gvd1n2yavya1li0xxm4r", - "depends": ["BiocFileCache", "BiocGenerics", "magick", "rjson", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocFileCache", "BiocGenerics", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "magick", "rjson"] }, "SpatialFeatureExperiment": { "name": "SpatialFeatureExperiment", "version": "1.6.1", "sha256": "0p7wqhn72p538wrlkd51mac87sjd5bh2k0k9vkvvvpfls02vfx01", - "depends": ["Biobase", "BiocGenerics", "BiocNeighbors", "BiocParallel", "data_table", "DropletUtils", "EBImage", "lifecycle", "Matrix", "rjson", "rlang", "S4Vectors", "sf", "sfheaders", "SingleCellExperiment", "SpatialExperiment", "spdep", "SummarizedExperiment", "terra", "zeallot"] + "depends": ["Biobase", "BiocGenerics", "BiocNeighbors", "BiocParallel", "DropletUtils", "EBImage", "Matrix", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "data_table", "lifecycle", "rjson", "rlang", "sf", "sfheaders", "spdep", "terra", "zeallot"] }, "SpatialOmicsOverlay": { "name": "SpatialOmicsOverlay", "version": "1.4.0", "sha256": "041kdamj3whw24c6075n0f1xxxba160s3c3kq2z7dqxwzks1k6rz", - "depends": ["base64enc", "Biobase", "BiocFileCache", "data_table", "dplyr", "EBImage", "GeomxTools", "ggplot2", "ggtext", "magick", "pbapply", "plotrix", "RBioFormats", "readxl", "S4Vectors", "scattermore", "stringr", "XML"] + "depends": ["Biobase", "BiocFileCache", "EBImage", "GeomxTools", "RBioFormats", "S4Vectors", "XML", "base64enc", "data_table", "dplyr", "ggplot2", "ggtext", "magick", "pbapply", "plotrix", "readxl", "scattermore", "stringr"] }, "SpeCond": { "name": "SpeCond", "version": "1.58.0", "sha256": "0gj9f0rycd4d8ixmivgy4ijs9pikjyhsj47k5hi8lgk9w7hnk8p4", - "depends": ["Biobase", "fields", "hwriter", "mclust", "RColorBrewer"] + "depends": ["Biobase", "RColorBrewer", "fields", "hwriter", "mclust"] }, "Spectra": { "name": "Spectra", "version": "1.14.1", "sha256": "0mvfndd7n7varrzmv9cd3ygwbdn97x5qcgmzcxc6hr76lnkwp8al", - "depends": ["BiocGenerics", "BiocParallel", "fs", "IRanges", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "IRanges", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "S4Vectors", "fs"] }, "SpectralTAD": { "name": "SpectralTAD", "version": "1.20.0", "sha256": "0rk15gs7bs5xhgl0k5qa0zyh0dcd2pr5qmqcrzvfh49bhbaylqbx", - "depends": ["BiocParallel", "cluster", "dplyr", "GenomicRanges", "HiCcompare", "magrittr", "Matrix", "PRIMME"] + "depends": ["BiocParallel", "GenomicRanges", "HiCcompare", "Matrix", "PRIMME", "cluster", "dplyr", "magrittr"] }, "SpliceWiz": { "name": "SpliceWiz", - "version": "1.6.0", - "sha256": "11pad2gdra4bq6is34d7981f6vb4wzsmvihgf08514d1598qn1cc", - "depends": ["AnnotationHub", "BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "data_table", "DelayedArray", "DelayedMatrixStats", "DT", "fst", "genefilter", "GenomeInfoDb", "GenomicRanges", "ggplot2", "HDF5Array", "heatmaply", "htmltools", "IRanges", "magrittr", "matrixStats", "NxtIRFdata", "ompBAM", "patchwork", "pheatmap", "plotly", "progress", "R_utils", "RColorBrewer", "Rcpp", "RcppProgress", "rhandsontable", "rhdf5", "rtracklayer", "rvest", "S4Vectors", "scales", "shiny", "shinydashboard", "shinyFiles", "shinyWidgets", "stringi", "SummarizedExperiment", "zlibbioc"] + "version": "1.6.2", + "sha256": "1n1j7fd8s2jkfh2w9a7101ckib0nmc9303mvnqxsij9x1934182r", + "depends": ["AnnotationHub", "BSgenome", "BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "DT", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "NxtIRFdata", "RColorBrewer", "RSQLite", "R_utils", "Rcpp", "RcppProgress", "S4Vectors", "SummarizedExperiment", "data_table", "fst", "genefilter", "ggplot2", "heatmaply", "htmltools", "magrittr", "matrixStats", "ompBAM", "patchwork", "pheatmap", "plotly", "progress", "rhandsontable", "rhdf5", "rtracklayer", "rvest", "scales", "shiny", "shinyFiles", "shinyWidgets", "shinydashboard", "stringi"] }, "SplicingFactory": { "name": "SplicingFactory", @@ -5809,49 +5833,49 @@ "name": "SplicingGraphs", "version": "1.44.0", "sha256": "1k4j23i7ffw1q18y48jhhj7g5k3vjihq619np2y7p7xc9wv0d45g", - "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "graph", "igraph", "IRanges", "Rgraphviz", "Rsamtools", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rgraphviz", "Rsamtools", "S4Vectors", "graph", "igraph"] }, "SpotClean": { "name": "SpotClean", "version": "1.6.1", "sha256": "1wq1igfyadmzszacnwx8rfhm82xslzqzjkvx6xigs1fng0c7yn61", - "depends": ["dplyr", "ggplot2", "Matrix", "RColorBrewer", "readbitmap", "rhdf5", "rjson", "rlang", "S4Vectors", "Seurat", "SpatialExperiment", "SummarizedExperiment", "tibble", "viridis"] + "depends": ["Matrix", "RColorBrewer", "S4Vectors", "Seurat", "SpatialExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "readbitmap", "rhdf5", "rjson", "rlang", "tibble", "viridis"] }, "SpotSweeper": { "name": "SpotSweeper", - "version": "1.0.0", - "sha256": "1jkc37ymip3r29fh041mfa2bq17qhxq7mp0i35zrjh2lzm83qxas", - "depends": ["BiocNeighbors", "escheR", "ggplot2", "MASS", "SingleCellExperiment", "spatialEco", "SpatialExperiment", "SummarizedExperiment"] + "version": "1.0.2", + "sha256": "058j58178k5c71ivwnb9l8japfldmdk6nqkzyxf9zmh3p9b7zkqz", + "depends": ["BiocNeighbors", "MASS", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "escheR", "ggplot2", "spatialEco"] }, "Statial": { "name": "Statial", "version": "1.6.0", "sha256": "0lzr0vc4zl5ryhs17l866w261ya9kxm7hx86g6xv16wr6fbw3mgv", - "depends": ["BiocParallel", "concaveman", "data_table", "dplyr", "ggplot2", "limma", "magrittr", "plotly", "purrr", "ranger", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "spatstat_explore", "spatstat_geom", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect"] + "depends": ["BiocParallel", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "concaveman", "data_table", "dplyr", "ggplot2", "limma", "magrittr", "plotly", "purrr", "ranger", "spatstat_explore", "spatstat_geom", "stringr", "tibble", "tidyr", "tidyselect"] }, "Streamer": { "name": "Streamer", "version": "1.50.0", "sha256": "0biizsjg9ysr2d1kyh962znikvgwli0zf0jn8khbs4prakjxmjyn", - "depends": ["BiocGenerics", "graph", "RBGL"] + "depends": ["BiocGenerics", "RBGL", "graph"] }, "Structstrings": { "name": "Structstrings", "version": "1.20.0", "sha256": "1ka9kixhgc9vfar18fzd8vd5ydmdkqa2s6xsmhlh927zrijs3vz9", - "depends": ["BiocGenerics", "Biostrings", "crayon", "IRanges", "S4Vectors", "stringi", "stringr", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "IRanges", "S4Vectors", "XVector", "crayon", "stringi", "stringr"] }, "StructuralVariantAnnotation": { "name": "StructuralVariantAnnotation", "version": "1.20.0", "sha256": "0hnpa6ykfasp2hshqdny29dyw6y9dib4rsm379fm7n8iami1rjp1", - "depends": ["assertthat", "BiocGenerics", "Biostrings", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "pwalign", "rlang", "rtracklayer", "S4Vectors", "stringr", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "assertthat", "dplyr", "pwalign", "rlang", "rtracklayer", "stringr"] }, "SubCellBarCode": { "name": "SubCellBarCode", "version": "1.20.0", "sha256": "1r4w6mbzfsgf6bd0x5g8chjqji7dll2vjdvzrlbzgdhb710hmil0", - "depends": ["AnnotationDbi", "caret", "e1071", "ggplot2", "ggrepel", "gridExtra", "networkD3", "org_Hs_eg_db", "Rtsne", "scatterplot3d"] + "depends": ["AnnotationDbi", "Rtsne", "caret", "e1071", "ggplot2", "ggrepel", "gridExtra", "networkD3", "org_Hs_eg_db", "scatterplot3d"] }, "SummarizedExperiment": { "name": "SummarizedExperiment", @@ -5869,13 +5893,13 @@ "name": "SurfR", "version": "1.0.0", "sha256": "0qbvwjcrxkv0as18af6436fi1i19gbvyj22fgglxmbmckxfwv14b", - "depends": ["assertr", "BiocFileCache", "BiocStyle", "biomaRt", "DESeq2", "dplyr", "edgeR", "enrichR", "ggplot2", "ggrepel", "gridExtra", "httr", "knitr", "magrittr", "metaRNASeq", "openxlsx", "rhdf5", "scales", "SPsimSeq", "stringr", "SummarizedExperiment", "TCGAbiolinks", "tidyr", "venn"] + "depends": ["BiocFileCache", "BiocStyle", "DESeq2", "SPsimSeq", "SummarizedExperiment", "TCGAbiolinks", "assertr", "biomaRt", "dplyr", "edgeR", "enrichR", "ggplot2", "ggrepel", "gridExtra", "httr", "knitr", "magrittr", "metaRNASeq", "openxlsx", "rhdf5", "scales", "stringr", "tidyr", "venn"] }, "SwathXtend": { "name": "SwathXtend", "version": "2.26.0", "sha256": "11k6a5m73pj49ahync5773w4wbz5mb27nss531nbqj738lnfidv4", - "depends": ["e1071", "lattice", "openxlsx", "VennDiagram"] + "depends": ["VennDiagram", "e1071", "lattice", "openxlsx"] }, "SynExtend": { "name": "SynExtend", @@ -5893,91 +5917,91 @@ "name": "TADCompare", "version": "1.14.0", "sha256": "1k80xwbc3h4994f8j5qr52rn2hk2l5qz1196r1kpn6m47h80fq6c", - "depends": ["cluster", "cowplot", "dplyr", "ggplot2", "ggpubr", "HiCcompare", "magrittr", "Matrix", "PRIMME", "RColorBrewer", "reshape2", "tidyr"] + "depends": ["HiCcompare", "Matrix", "PRIMME", "RColorBrewer", "cluster", "cowplot", "dplyr", "ggplot2", "ggpubr", "magrittr", "reshape2", "tidyr"] }, "TAPseq": { "name": "TAPseq", "version": "1.16.0", "sha256": "0nz70a68cn8is0hp8srp7clqwwnr045mpibz4yazskia7lhbm73i", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "tidyr"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "dplyr", "tidyr"] }, "TBSignatureProfiler": { "name": "TBSignatureProfiler", "version": "1.16.0", "sha256": "1vjd9dwnr6m867d1ax6kwj4w5qs5y81fzrnnjl6xkl2ch3g48jpk", - 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"depends": ["GenomicRanges", "MOFAdata", "readr", "rTensor", "shiny", "tximport", "tximportData"] + "depends": ["GenomicRanges", "MOFAdata", "rTensor", "readr", "shiny", "tximport", "tximportData"] }, "TDbasedUFEadv": { "name": "TDbasedUFEadv", "version": "1.4.0", "sha256": "1iiil5vn95bsldxigjlyqraivrnwlajkn18y0880qinrbfcwpidz", - "depends": ["Biobase", "DOSE", "enrichplot", "enrichR", "GenomicRanges", "hash", "RTCGA", "rTensor", "shiny", "STRINGdb", "TDbasedUFE"] + "depends": ["Biobase", "DOSE", "GenomicRanges", "RTCGA", "STRINGdb", "TDbasedUFE", "enrichR", "enrichplot", "hash", "rTensor", "shiny"] }, "TEKRABber": { "name": "TEKRABber", "version": "1.8.0", "sha256": "0ivbj063awdh41ldj6cl68ydx8y4jv8wzwwxr67iwhxdgpcwlwx8", - "depends": ["apeglm", "biomaRt", "DESeq2", "doParallel", "dplyr", "foreach", "GenomeInfoDb", "magrittr", "Rcpp", "rtracklayer", "SCBN"] + "depends": ["DESeq2", "GenomeInfoDb", "Rcpp", "SCBN", "apeglm", "biomaRt", "doParallel", "dplyr", "foreach", "magrittr", "rtracklayer"] }, "TENxIO": { "name": "TENxIO", "version": "1.6.0", "sha256": "1bghch637h2cckkb8czzjnvn4vlh4cjk8izy6079wq8p39zr10fx", - "depends": ["BiocBaseUtils", "BiocGenerics", "BiocIO", "GenomeInfoDb", "GenomicRanges", "Matrix", "MatrixGenerics", "R_utils", "RCurl", "readr", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocBaseUtils", "BiocGenerics", "BiocIO", "GenomeInfoDb", "GenomicRanges", "Matrix", "MatrixGenerics", "RCurl", "R_utils", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "readr"] }, "TEQC": { "name": "TEQC", "version": "4.26.0", "sha256": "1cvc4lrnhkr5l5x0cpjmzxj449lmkw337a8gpan73yvj2p0r7axg", - "depends": ["Biobase", "BiocGenerics", "hwriter", "IRanges", "Rsamtools"] + "depends": ["Biobase", "BiocGenerics", "IRanges", "Rsamtools", "hwriter"] }, "TFARM": { "name": "TFARM", "version": "1.26.0", "sha256": "1l2763lxgda628i6abl2hp5ghxzzw1lk3zmd15aibf8rfl9cghha", - "depends": ["arules", "fields", "GenomicRanges", "gplots", "stringr"] + "depends": ["GenomicRanges", "arules", "fields", "gplots", "stringr"] }, "TFBSTools": { "name": "TFBSTools", "version": "1.42.0", "sha256": "0bmmsgmx7159bdrflykkis0v4z1ixwlnmw1kx0y0kw15lw3cjnsh", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "caTools", "CNEr", "DBI", "DirichletMultinomial", "GenomeInfoDb", "GenomicRanges", "gtools", "IRanges", "pwalign", "RSQLite", "rtracklayer", "S4Vectors", "seqLogo", "TFMPvalue", "XML", "XVector"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "CNEr", "DBI", "DirichletMultinomial", "GenomeInfoDb", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "TFMPvalue", "XML", "XVector", "caTools", "gtools", "pwalign", "rtracklayer", "seqLogo"] }, "TFEA_ChIP": { "name": "TFEA.ChIP", "version": "1.24.0", "sha256": "0xn176h7dfb3sbg913xzwj3c2ymzf7i0y2an19zjvynk49xq12ph", - "depends": ["biomaRt", "dplyr", "GenomicFeatures", "GenomicRanges", "IRanges", "org_Hs_eg_db", "R_utils"] + "depends": ["GenomicFeatures", "GenomicRanges", "IRanges", "R_utils", "biomaRt", "dplyr", "org_Hs_eg_db"] }, "TFHAZ": { "name": "TFHAZ", @@ -5989,85 +6013,85 @@ "name": "TFutils", "version": "1.24.0", "sha256": "0n0szdh09zr7866pl6y5zps6izlylhh1n20zkv7xsaq91hsw9g52", - "depends": ["AnnotationDbi", "BiocFileCache", "dplyr", "DT", "GSEABase", "httr", "magrittr", "miniUI", "org_Hs_eg_db", "readxl", "rjson", "Rsamtools", "shiny"] + "depends": ["AnnotationDbi", "BiocFileCache", "DT", "GSEABase", "Rsamtools", "dplyr", "httr", "magrittr", "miniUI", "org_Hs_eg_db", "readxl", "rjson", "shiny"] }, "TIN": { "name": "TIN", "version": "1.36.0", "sha256": "06dmy5yjskaisibbr4qlw7bdbwj8v1b09c28v4wzd86a2554hywp", - "depends": ["aroma_affymetrix", "data_table", "impute", "squash", "stringr", "WGCNA"] + "depends": ["WGCNA", "aroma_affymetrix", "data_table", "impute", "squash", "stringr"] }, "TMixClust": { "name": "TMixClust", "version": "1.26.0", "sha256": "0p88kdl9v2q6wabr31v26q0612qcw1q5s71zbanamx0s2xsvyjgh", - "depends": ["Biobase", "BiocParallel", "cluster", "flexclust", "gss", "mvtnorm", "SPEM", "zoo"] + "depends": ["Biobase", "BiocParallel", "SPEM", "cluster", "flexclust", "gss", "mvtnorm", "zoo"] }, "TOAST": { "name": "TOAST", "version": "1.18.0", "sha256": "0srjx9z59a65nhrxbzxzxnkyn28zskc6z4p8drihq1lhw6mvdp4r", - "depends": ["corpcor", "doParallel", "EpiDISH", "GGally", "ggplot2", "limma", "nnls", "quadprog", "SummarizedExperiment", "tidyr"] + "depends": ["EpiDISH", "GGally", "SummarizedExperiment", "corpcor", "doParallel", "ggplot2", "limma", "nnls", "quadprog", "tidyr"] }, "TOP": { "name": "TOP", "version": "1.4.0", "sha256": "1lj7a9kry3ca2iz231si0vfxbnib5wqj5x4ldvb1l1wfjhdf4x2p", - "depends": ["assertthat", "caret", "ClassifyR", "directPA", "doParallel", "dplyr", "ggnewscale", "ggplot2", "ggraph", "ggrepel", "ggthemes", "glmnet", "Hmisc", "igraph", "latex2exp", "limma", "magrittr", "plotly", "pROC", "purrr", "reshape2", "statmod", "stringr", "survival", "tibble", "tidygraph", "tidyr"] + "depends": ["ClassifyR", "Hmisc", "assertthat", "caret", "directPA", "doParallel", "dplyr", "ggnewscale", "ggplot2", "ggraph", "ggrepel", "ggthemes", "glmnet", "igraph", "latex2exp", "limma", "magrittr", "pROC", "plotly", "purrr", "reshape2", "statmod", "stringr", "survival", "tibble", "tidygraph", "tidyr"] }, "TPP": { "name": "TPP", "version": "3.32.0", "sha256": "1pfnk9zfd7d8ysiiawj1xbcq7vck5xs25jy2rz94mpwvgpxkvkif", - 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"depends": ["Matrix", "purrr", "rafalib", "SummarizedExperiment"] + "depends": ["Matrix", "SummarizedExperiment", "purrr", "rafalib"] }, "TRESS": { "name": "TRESS", "version": "1.10.0", "sha256": "1dv6xr625gr7jf7rk7fxhfyxgkrkc71mdc3fvzi98r23sk1h62xq", - "depends": ["AnnotationDbi", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "matrixStats", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["AnnotationDbi", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rsamtools", "S4Vectors", "matrixStats", "rtracklayer"] }, "TRONCO": { "name": "TRONCO", "version": "2.36.0", "sha256": "1dliwyjsvwr6cjf4cp3w7h46ac4fzd7hnfw4nsb330ajdr38ri0y", - "depends": ["bnlearn", "circlize", "doParallel", "foreach", "gridExtra", "gtable", "gtools", "igraph", "iterators", "R_matlab", "RColorBrewer", "Rgraphviz", "scales", "xtable"] + "depends": ["RColorBrewer", "R_matlab", "Rgraphviz", "bnlearn", "circlize", "doParallel", "foreach", "gridExtra", "gtable", "gtools", "igraph", "iterators", "scales", "xtable"] }, "TSAR": { "name": "TSAR", "version": "1.2.0", "sha256": "1bnyrrc92m4v35ar640pnm1fb3cq3hlp8lpwicrzbv8dvyzsxw43", - "depends": ["dplyr", "ggplot2", "ggpubr", "jsonlite", "magrittr", "mgcv", "minpack_lm", "openxlsx", "plotly", "readxl", "rhandsontable", "shiny", "shinyjs", "shinyWidgets", "stringr", "tidyr"] + "depends": ["dplyr", "ggplot2", "ggpubr", "jsonlite", "magrittr", "mgcv", "minpack_lm", "openxlsx", "plotly", "readxl", "rhandsontable", "shiny", "shinyWidgets", "shinyjs", "stringr", "tidyr"] }, "TSCAN": { "name": "TSCAN", "version": "1.42.0", "sha256": "1s80n1yjmshy59ls607hp8hpq56hllbh0a4mbgvxd8bqh4njfc0j", - "depends": ["combinat", "DelayedArray", "fastICA", "ggplot2", "gplots", "igraph", "Matrix", "mclust", "mgcv", "plyr", "S4Vectors", "shiny", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils"] + "depends": ["DelayedArray", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils", "combinat", "fastICA", "ggplot2", "gplots", "igraph", "mclust", "mgcv", "plyr", "shiny"] }, "TTMap": { "name": "TTMap", "version": "1.26.0", "sha256": "0988hy3hr3cf7snj7k7d0gl0w4qg7ssk53pmvvng171b82m6szqw", - "depends": ["Biobase", "colorRamps", "rgl", "SummarizedExperiment"] + "depends": ["Biobase", "SummarizedExperiment", "colorRamps", "rgl"] }, "TVTB": { "name": "TVTB", - "version": "1.30.0", - "sha256": "0in5l9nq0br7c1n546wn29av5m25xxc82hvns5z8mshnnlk59pmn", - "depends": ["AnnotationFilter", "BiocGenerics", "BiocParallel", "Biostrings", "ensembldb", "ensemblVEP", "GenomeInfoDb", "GenomicRanges", "GGally", "ggplot2", "Gviz", "IRanges", "limma", "reshape2", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "version": "1.30.1", + "sha256": "1dacdp9rkh47mc1bpz1y0xhrncdc3hwgvi2436wpahra5adcg1mh", + "depends": ["AnnotationFilter", "BiocGenerics", "BiocParallel", "Biostrings", "GGally", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "ensembldb", "ggplot2", "limma", "reshape2"] }, "TargetDecoy": { "name": "TargetDecoy", @@ -6083,8 +6107,8 @@ }, "TargetSearch": { "name": "TargetSearch", - "version": "2.6.1", - "sha256": "1q6v6pfkpcm23a39vgp9ysbqa6wwkwv9dgnxd6m8gjlq3azgsnf6", + "version": "2.6.2", + "sha256": "0l3prcqi80g9n823gm2bnpn30r95dbmg5yfvdqwsvd465kyah3hz", "depends": ["assertthat", "ncdf4"] }, "TileDBArray": { @@ -6097,19 +6121,19 @@ "name": "TissueEnrich", "version": "1.24.1", "sha256": "02amlvaf5v30x2swxhi4na4c623v00gb3q1bvlcqias9gaaizzim", - "depends": ["dplyr", "ggplot2", "GSEABase", "SummarizedExperiment", "tidyr"] + "depends": ["GSEABase", "SummarizedExperiment", "dplyr", "ggplot2", "tidyr"] }, "TitanCNA": { "name": "TitanCNA", "version": "1.42.0", "sha256": "18ihvqn07g677r3facf43m69bnjx4i0s6w41h4mdn82hal0pfsx0", - "depends": ["BiocGenerics", "data_table", "dplyr", "foreach", "GenomeInfoDb", "GenomicRanges", "IRanges", "VariantAnnotation"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "VariantAnnotation", "data_table", "dplyr", "foreach"] }, "ToxicoGx": { "name": "ToxicoGx", "version": "2.8.0", "sha256": "0b34d5js6w50bm5cl5v8ppfc0lljsbm1zbrqlc5qifc8lcyliq8a", - "depends": ["assertthat", "Biobase", "BiocGenerics", "BiocParallel", "caTools", "CoreGx", "data_table", "downloader", "dplyr", "ggplot2", "jsonlite", "limma", "magrittr", "reshape2", "S4Vectors", "scales", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "CoreGx", "S4Vectors", "SummarizedExperiment", "assertthat", "caTools", "data_table", "downloader", "dplyr", "ggplot2", "jsonlite", "limma", "magrittr", "reshape2", "scales", "tibble", "tidyr"] }, "TrajectoryGeometry": { "name": "TrajectoryGeometry", @@ -6121,31 +6145,31 @@ "name": "TrajectoryUtils", "version": "1.12.0", "sha256": "15q1mq48nclf2lqc2v769q79frrbm2l65d54vcqg06b861q2wq9h", - "depends": ["igraph", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "igraph"] }, "TransView": { "name": "TransView", "version": "1.48.0", "sha256": "1bk4h1sh2xdm67mkzsg2l0kgg88m5z39hxmshh0j2bybyyy07jkp", - "depends": ["BiocGenerics", "GenomicRanges", "gplots", "IRanges", "Rhtslib", "S4Vectors", "zlibbioc"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "Rhtslib", "S4Vectors", "gplots", "zlibbioc"] }, "TreeAndLeaf": { "name": "TreeAndLeaf", "version": "1.16.0", "sha256": "0fm1v6w73vs99smqk8i8b85pr38zlbpgyby6qh3s0xslxbyk6b32", - "depends": ["ape", "igraph", "RedeR"] + "depends": ["RedeR", "ape", "igraph"] }, "TreeSummarizedExperiment": { "name": "TreeSummarizedExperiment", "version": "2.12.0", "sha256": "0ygzw9nba5pxgrbib8sm7qwhzzm8m038banb0z7n42vkb1cb3d5i", - "depends": ["ape", "BiocGenerics", "BiocParallel", "Biostrings", "dplyr", "IRanges", "rlang", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "treeio"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "IRanges", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ape", "dplyr", "rlang", "treeio"] }, "Trendy": { "name": "Trendy", "version": "1.26.0", "sha256": "172hcq9zxah3m55j3kzpg5hvr06d656j1s8j3jcvksc0f3l9r990", - "depends": ["BiocParallel", "DT", "gplots", "magrittr", "S4Vectors", "segmented", "shiny", "shinyFiles", "SummarizedExperiment"] + "depends": ["BiocParallel", "DT", "S4Vectors", "SummarizedExperiment", "gplots", "magrittr", "segmented", "shiny", "shinyFiles"] }, "TurboNorm": { "name": "TurboNorm", @@ -6163,25 +6187,25 @@ "name": "UCSC.utils", "version": "1.0.0", "sha256": "0w9f5xd6ryniapbpcrpczn8wimph2154w45cvdgqfa3dv5qy379l", - "depends": ["httr", "jsonlite", "S4Vectors"] + "depends": ["S4Vectors", "httr", "jsonlite"] }, "UCell": { "name": "UCell", "version": "2.8.0", "sha256": "09r64rrydwgvvvq8f5vzvn7dsh24l9sa1if21wcimrl28ci1g1mv", - "depends": ["BiocNeighbors", "BiocParallel", "data_table", "Matrix", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocNeighbors", "BiocParallel", "Matrix", "SingleCellExperiment", "SummarizedExperiment", "data_table"] }, "UMI4Cats": { "name": "UMI4Cats", "version": "1.14.0", "sha256": "1cf2jsmhsmw6i381wxnb0zsyhkr2mjlxlzpjnlfxyf4kr6n8k797", - "depends": ["annotate", "BiocFileCache", "BiocGenerics", "Biostrings", "BSgenome", "cowplot", "DESeq2", "dplyr", "fda", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "magick", "magrittr", "org_Hs_eg_db", "R_utils", "rappdirs", "Rbowtie2", "RColorBrewer", "regioneR", "reshape2", "rlang", "Rsamtools", "S4Vectors", "scales", "ShortRead", "stringr", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "zoo"] + "depends": ["BSgenome", "BiocFileCache", "BiocGenerics", "Biostrings", "DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "R_utils", "Rbowtie2", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "annotate", "cowplot", "dplyr", "fda", "ggplot2", "magick", "magrittr", "org_Hs_eg_db", "rappdirs", "regioneR", "reshape2", "rlang", "scales", "stringr", "zoo"] }, "UNDO": { "name": "UNDO", "version": "1.46.0", "sha256": "1h7bri3hkl99gll5vpamgp7x60afdmq8h1mqw4plr9ypxv2kljpj", - "depends": ["Biobase", "BiocGenerics", "boot", "MASS", "nnls"] + "depends": ["Biobase", "BiocGenerics", "MASS", "boot", "nnls"] }, "UPDhmm": { "name": "UPDhmm", @@ -6193,25 +6217,25 @@ "name": "Ularcirc", "version": "1.22.0", "sha256": "0qzkvwg3gd9v9cqf3hmmyh4gzdqs5m6nxjjbnhqsdp6wshccdv4p", - "depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "Biostrings", "BSgenome", "data_table", "DT", "GenomeInfoDb", "GenomeInfoDbData", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggrepel", "gsubfn", "mirbase_db", "moments", "Organism_dplyr", "plotgardener", "R_utils", "S4Vectors", "shiny", "shinydashboard", "shinyFiles", "shinyjs", "yaml"] + "depends": ["AnnotationDbi", "AnnotationHub", "BSgenome", "BiocGenerics", "Biostrings", "DT", "GenomeInfoDb", "GenomeInfoDbData", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Organism_dplyr", "R_utils", "S4Vectors", "data_table", "ggplot2", "ggrepel", "gsubfn", "mirbase_db", "moments", "plotgardener", "shiny", "shinyFiles", "shinydashboard", "shinyjs", "yaml"] }, "UniProt_ws": { "name": "UniProt.ws", "version": "2.44.0", "sha256": "1vcbphksaanggig1yfmrihhw1a4fmy1cl7yq5w3z3lb6zik5rgx8", - "depends": ["AnnotationDbi", "BiocBaseUtils", "BiocFileCache", "BiocGenerics", "httpcache", "httr", "jsonlite", "progress", "rjsoncons", "RSQLite"] + "depends": ["AnnotationDbi", "BiocBaseUtils", "BiocFileCache", "BiocGenerics", "RSQLite", "httpcache", "httr", "jsonlite", "progress", "rjsoncons"] }, "Uniquorn": { "name": "Uniquorn", "version": "2.24.0", "sha256": "1f2hp395gfxnrf9mg8kqd6cjr9b651gzrj2bcfv5hx2qh0mh1z75", - "depends": ["data_table", "doParallel", "foreach", "GenomicRanges", "IRanges", "R_utils", "stringr", "VariantAnnotation", "WriteXLS"] + "depends": ["GenomicRanges", "IRanges", "R_utils", "VariantAnnotation", "WriteXLS", "data_table", "doParallel", "foreach", "stringr"] }, "VAExprs": { "name": "VAExprs", "version": "1.10.0", "sha256": "0mcdh0xsqjpc3nj1xfps3y2r62ayh8ykgpyblqxp2n52f781hcbx", - "depends": ["CatEncoders", "DeepPINCS", "DiagrammeR", "keras", "mclust", "purrr", "scater", "SingleCellExperiment", "SummarizedExperiment", "tensorflow"] + "depends": ["CatEncoders", "DeepPINCS", "DiagrammeR", "SingleCellExperiment", "SummarizedExperiment", "keras", "mclust", "purrr", "scater", "tensorflow"] }, "VCFArray": { "name": "VCFArray", @@ -6223,55 +6247,55 @@ "name": "VDJdive", "version": "1.6.0", "sha256": "1ml175pk27msai86pnm8jyy8li7f5rkkqqfw1a9m9d850n7ry37h", - "depends": ["BiocParallel", "cowplot", "ggplot2", "gridExtra", "IRanges", "Matrix", "RColorBrewer", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "IRanges", "Matrix", "RColorBrewer", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cowplot", "ggplot2", "gridExtra"] }, "VERSO": { "name": "VERSO", "version": "1.14.0", "sha256": "1yixhbwa2wi3rddmyd37b9nznw4c7s36wz0mnzwqvx1n9w0zpdk3", - "depends": ["ape", "data_tree", "Rfast"] + "depends": ["Rfast", "ape", "data_tree"] }, "VaSP": { "name": "VaSP", "version": "1.16.0", "sha256": "1gh0mgci2jadv3g0wc3li6d9rlaaqybdx148gkzwnjf0bmhqxz34", - "depends": ["ballgown", "cluster", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "matrixStats", "Rsamtools", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ballgown", "cluster", "matrixStats"] }, "VanillaICE": { "name": "VanillaICE", "version": "1.66.0", "sha256": "0a9yzlwnyq9840w25gqsc0ijydifq6kbr7z9bzq74s7zqxzxkkqv", - "depends": ["Biobase", "BiocGenerics", "BSgenome_Hsapiens_UCSC_hg18", "crlmm", "data_table", "foreach", "GenomeInfoDb", "GenomicRanges", "IRanges", "lattice", "MatrixGenerics", "matrixStats", "oligoClasses", "S4Vectors", "SummarizedExperiment"] + "depends": ["BSgenome_Hsapiens_UCSC_hg18", "Biobase", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "MatrixGenerics", "S4Vectors", "SummarizedExperiment", "crlmm", "data_table", "foreach", "lattice", "matrixStats", "oligoClasses"] }, "VarCon": { "name": "VarCon", "version": "1.12.0", "sha256": "1ns5sxb2qrh0y6hdg6qn6s1hl4d64cvsipl6mcwqiyka9lrlmlhy", - "depends": ["Biostrings", "BSgenome", "GenomicRanges", "ggplot2", "IRanges", "shiny", "shinycssloaders", "shinyFiles"] + "depends": ["BSgenome", "Biostrings", "GenomicRanges", "IRanges", "ggplot2", "shiny", "shinyFiles", "shinycssloaders"] }, "VariantAnnotation": { "name": "VariantAnnotation", "version": "1.50.0", "sha256": "0slvlhm65hkjspzlzs3gi04a6mlfwvda314z1nmzpdi3y5111fg7", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "Biostrings", "BSgenome", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MatrixGenerics", "Rhtslib", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "XVector", "zlibbioc"] + "depends": ["AnnotationDbi", "BSgenome", "Biobase", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MatrixGenerics", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "XVector", "rtracklayer", "zlibbioc"] }, "VariantExperiment": { "name": "VariantExperiment", "version": "1.18.1", "sha256": "0wxhfd92cfh9rg99jrw9rg7vfqk8lf2ylkpki2jf59hlx8zzs2z9", - "depends": ["Biostrings", "DelayedArray", "DelayedDataFrame", "GDSArray", "gdsfmt", "GenomicRanges", "IRanges", "S4Vectors", "SeqArray", "SNPRelate", "SummarizedExperiment"] + "depends": ["Biostrings", "DelayedArray", "DelayedDataFrame", "GDSArray", "GenomicRanges", "IRanges", "S4Vectors", "SNPRelate", "SeqArray", "SummarizedExperiment", "gdsfmt"] }, "VariantFiltering": { "name": "VariantFiltering", "version": "1.40.0", "sha256": "14kxlzgy71s8h34galx93q8kalspr1m23brssbr3wha0hxb0ghgd", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "DT", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GenomicScores", "graph", "Gviz", "IRanges", "RBGL", "Rsamtools", "S4Vectors", "shiny", "shinyjs", "shinythemes", "shinyTree", "SummarizedExperiment", "VariantAnnotation", "XVector"] + "depends": ["AnnotationDbi", "BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DT", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GenomicScores", "Gviz", "IRanges", "RBGL", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "XVector", "graph", "shiny", "shinyTree", "shinyjs", "shinythemes"] }, "VariantTools": { "name": "VariantTools", "version": "1.46.0", "sha256": "1idil9vkd5risx9ahkagdacnj2g2a11gzsd7wmhg5gjmr77r53ww", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rsamtools", "rtracklayer", "S4Vectors", "VariantAnnotation"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rsamtools", "S4Vectors", "VariantAnnotation", "rtracklayer"] }, "VegaMC": { "name": "VegaMC", @@ -6283,31 +6307,31 @@ "name": "VennDetail", "version": "1.20.0", "sha256": "0987ljk70lsjhwzk3dxslg80ng8cnjhh02zr2raphyliys0msvxz", - "depends": ["dplyr", "futile_logger", "ggplot2", "magrittr", "purrr", "tibble", "UpSetR", "VennDiagram"] + "depends": ["UpSetR", "VennDiagram", "dplyr", "futile_logger", "ggplot2", "magrittr", "purrr", "tibble"] }, "ViSEAGO": { "name": "ViSEAGO", "version": "1.18.0", "sha256": "06cqx88vndmgxb7vhn7w0kwkxrsn8hy3a3mz591pj48f3z0q9w16", - "depends": ["AnnotationDbi", "AnnotationForge", "biomaRt", "data_table", "dendextend", "DiagrammeR", "DT", "dynamicTreeCut", "fgsea", "ggplot2", "GO_db", "GOSemSim", "heatmaply", "htmlwidgets", "igraph", "plotly", "processx", "R_utils", "RColorBrewer", "scales", "topGO", "UpSetR"] + "depends": ["AnnotationDbi", "AnnotationForge", "DT", "DiagrammeR", "GOSemSim", "GO_db", "RColorBrewer", "R_utils", "UpSetR", "biomaRt", "data_table", "dendextend", "dynamicTreeCut", "fgsea", "ggplot2", "heatmaply", "htmlwidgets", "igraph", "plotly", "processx", "scales", "topGO"] }, "VisiumIO": { "name": "VisiumIO", "version": "1.0.0", "sha256": "01yvahz20fkvf2mj0zjl04w0dzs5jf4snlmry8d5a9y3smkspqyv", - "depends": ["BiocBaseUtils", "BiocGenerics", "BiocIO", "jsonlite", "S4Vectors", "SpatialExperiment", "SummarizedExperiment", "TENxIO"] + "depends": ["BiocBaseUtils", "BiocGenerics", "BiocIO", "S4Vectors", "SpatialExperiment", "SummarizedExperiment", "TENxIO", "jsonlite"] }, "Voyager": { "name": "Voyager", "version": "1.6.0", "sha256": "0nvcp1wcrisiljj4w61ykz82a2l8c9vx8ixh209v2ih004wyy1y1", - "depends": ["BiocParallel", "bluster", "ggnewscale", "ggplot2", "lifecycle", "Matrix", "matrixStats", "memuse", "patchwork", "rlang", "RSpectra", "S4Vectors", "scales", "scico", "sf", "SingleCellExperiment", "SpatialExperiment", "SpatialFeatureExperiment", "spdep", "SummarizedExperiment", "terra"] + "depends": ["BiocParallel", "Matrix", "RSpectra", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SpatialFeatureExperiment", "SummarizedExperiment", "bluster", "ggnewscale", "ggplot2", "lifecycle", "matrixStats", "memuse", "patchwork", "rlang", "scales", "scico", "sf", "spdep", "terra"] }, "VplotR": { "name": "VplotR", "version": "1.14.0", "sha256": "1cg5ifl2k2134k5lhxfvsr4xm31w0bdg0rzy8yb5k77gldilb0il", - "depends": ["cowplot", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "RColorBrewer", "reshape2", "Rsamtools", "S4Vectors", "zoo"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "cowplot", "ggplot2", "magrittr", "reshape2", "zoo"] }, "Wrench": { "name": "Wrench", @@ -6319,19 +6343,19 @@ "name": "XDE", "version": "2.50.0", "sha256": "1f0aahpyrmkg5h3v6v5qw35gsjskh6dh16bgygkssa1qcafmqfv1", - "depends": ["Biobase", "BiocGenerics", "genefilter", "GeneMeta", "gtools", "mvtnorm", "RColorBrewer", "siggenes"] + "depends": ["Biobase", "BiocGenerics", "GeneMeta", "RColorBrewer", "genefilter", "gtools", "mvtnorm", "siggenes"] }, "XINA": { "name": "XINA", "version": "1.22.0", "sha256": "177yzqmkf3f2xgfrz1zpcw554yzm4njd2chhmvxi2vvijvnrgdf3", - "depends": ["alluvial", "ggplot2", "gridExtra", "igraph", "mclust", "plyr", "STRINGdb"] + "depends": ["STRINGdb", "alluvial", "ggplot2", "gridExtra", "igraph", "mclust", "plyr"] }, "XNAString": { "name": "XNAString", "version": "1.12.0", "sha256": "0dgdaq8w7q32scdxragi40x7mkgpvvyzs2bwfb6c2yb4n2j40imi", - "depends": ["Biostrings", "BSgenome", "data_table", "formattable", "future_apply", "GenomicRanges", "IRanges", "pwalign", "Rcpp", "S4Vectors", "stringi", "stringr"] + "depends": ["BSgenome", "Biostrings", "GenomicRanges", "IRanges", "Rcpp", "S4Vectors", "data_table", "formattable", "future_apply", "pwalign", "stringi", "stringr"] }, "XVector": { "name": "XVector", @@ -6343,19 +6367,19 @@ "name": "Xeva", "version": "1.20.0", "sha256": "1n6bxj5gshr2rzcxw6dc5wcmj1ajssrqzp7a7b6rlnszk2h4vgys", - "depends": ["BBmisc", "Biobase", "ComplexHeatmap", "doParallel", "downloader", "ggplot2", "nlme", "PharmacoGx", "Rmisc", "scales"] + "depends": ["BBmisc", "Biobase", "ComplexHeatmap", "PharmacoGx", "Rmisc", "doParallel", "downloader", "ggplot2", "nlme", "scales"] }, "YAPSA": { "name": "YAPSA", "version": "1.30.0", "sha256": "0908hyji07br1i1zms21a99m3mvi707xj8zbd1w64gzackghabhl", - "depends": ["Biostrings", "BSgenome_Hsapiens_UCSC_hg19", "circlize", "ComplexHeatmap", "corrplot", "dendextend", "doParallel", "dplyr", "GenomeInfoDb", "GenomicRanges", "GetoptLong", "ggbeeswarm", "ggplot2", "gridExtra", "gtrellis", "KEGGREST", "limSolve", "magrittr", "PMCMRplus", "pracma", "reshape2", "SomaticSignatures", "VariantAnnotation"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "Biostrings", "ComplexHeatmap", "GenomeInfoDb", "GenomicRanges", "GetoptLong", "KEGGREST", "PMCMRplus", "SomaticSignatures", "VariantAnnotation", "circlize", "corrplot", "dendextend", "doParallel", "dplyr", "ggbeeswarm", "ggplot2", "gridExtra", "gtrellis", "limSolve", "magrittr", "pracma", "reshape2"] }, "ZygosityPredictor": { "name": "ZygosityPredictor", "version": "1.4.0", "sha256": "03yxnrbkfzc1dqa8zin8gwi9iryw3ir2k5s80dzxclr1651zh5xd", - "depends": ["DelayedArray", "dplyr", "GenomicAlignments", "GenomicRanges", "igraph", "IRanges", "knitr", "magrittr", "purrr", "readr", "rlang", "Rsamtools", "stringr", "tibble", "VariantAnnotation"] + "depends": ["DelayedArray", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "VariantAnnotation", "dplyr", "igraph", "knitr", "magrittr", "purrr", "readr", "rlang", "stringr", "tibble"] }, "a4": { "name": "a4", @@ -6367,13 +6391,13 @@ "name": "a4Base", "version": "1.52.0", "sha256": "19vapjmyd3ly3s2gqa2xfg99gyc6n6lv3c6rpi0ch4hzb7wiinvm", - "depends": ["a4Core", "a4Preproc", "annaffy", "Biobase", "genefilter", "glmnet", "gplots", "limma", "mpm", "multtest"] + "depends": ["Biobase", "a4Core", "a4Preproc", "annaffy", "genefilter", "glmnet", "gplots", "limma", "mpm", "multtest"] }, "a4Classif": { "name": "a4Classif", "version": "1.52.0", "sha256": "15jcd66brvbjz0p3z2b43ac5k81s3vmcbkwmga0f7f5v53fp8qvw", - "depends": ["a4Core", "a4Preproc", "Biobase", "glmnet", "pamr", "ROCR", "varSelRF"] + "depends": ["Biobase", "ROCR", "a4Core", "a4Preproc", "glmnet", "pamr", "varSelRF"] }, "a4Core": { "name": "a4Core", @@ -6403,7 +6427,7 @@ "name": "abseqR", "version": "1.22.0", "sha256": "0aj3kh4c8zk60n6yyh2jblbrvv77071r96m0mrcslqm71dwg9402", - "depends": ["BiocParallel", "BiocStyle", "circlize", "flexdashboard", "ggcorrplot", "ggdendro", "ggplot2", "gridExtra", "knitr", "plotly", "plyr", "png", "RColorBrewer", "reshape2", "rmarkdown", "stringr", "vegan", "VennDiagram"] + "depends": ["BiocParallel", "BiocStyle", "RColorBrewer", "VennDiagram", "circlize", "flexdashboard", "ggcorrplot", "ggdendro", "ggplot2", "gridExtra", "knitr", "plotly", "plyr", "png", "reshape2", "rmarkdown", "stringr", "vegan"] }, "acde": { "name": "acde", @@ -6415,19 +6439,19 @@ "name": "adSplit", "version": "1.74.0", "sha256": "13rrkb0vxkknvqhb8pgx8d13sxzy3w0wbkhhj5lrlc1kb1yqcfbh", - "depends": ["AnnotationDbi", "Biobase", "cluster", "GO_db", "KEGGREST", "multtest"] + "depends": ["AnnotationDbi", "Biobase", "GO_db", "KEGGREST", "cluster", "multtest"] }, "adductomicsR": { "name": "adductomicsR", "version": "1.20.0", "sha256": "0800jbfm488i6ccz48k49gpxr9sf9104cxcghgy9c4lzm5d3wfbm", - "depends": ["adductData", "ade4", "AnnotationHub", "bootstrap", "data_table", "doSNOW", "dplyr", "DT", "ExperimentHub", "fastcluster", "foreach", "fpc", "mzR", "OrgMassSpecR", "pastecs", "pracma", "RcppEigen", "reshape2", "rvest", "smoother", "zoo"] + "depends": ["AnnotationHub", "DT", "ExperimentHub", "OrgMassSpecR", "RcppEigen", "adductData", "ade4", "bootstrap", "data_table", "doSNOW", "dplyr", "fastcluster", "foreach", "fpc", "mzR", "pastecs", "pracma", "reshape2", "rvest", "smoother", "zoo"] }, "adverSCarial": { "name": "adverSCarial", "version": "1.2.0", "sha256": "1c8anqpxdrkc33pfm1phqjsb8kjdrfqxh93x8n2mpsywqg8q27pb", - "depends": ["DelayedArray", "gtools", "S4Vectors"] + "depends": ["DelayedArray", "S4Vectors", "gtools"] }, "affxparser": { "name": "affxparser", @@ -6439,25 +6463,25 @@ "name": "affy", "version": "1.82.0", "sha256": "19z22c1yd3rkwk7dp8q8xv16n0qv92iz00vzid3pniy7zr80cxxy", - "depends": ["affyio", "Biobase", "BiocGenerics", "BiocManager", "preprocessCore", "zlibbioc"] + "depends": ["Biobase", "BiocGenerics", "BiocManager", "affyio", "preprocessCore", "zlibbioc"] }, "affyContam": { "name": "affyContam", "version": "1.62.0", "sha256": "0r4pqda9pv60b867c6yi328687kyxjglk5jmcal6xnlr75nf4w0y", - "depends": ["affy", "affydata", "Biobase"] + "depends": ["Biobase", "affy", "affydata"] }, "affyILM": { "name": "affyILM", "version": "1.56.0", "sha256": "185kdrnvcp2jw0k71q0v4yk7583gwgi31h0n281x25hirixf6rm3", - "depends": ["affxparser", "affy", "Biobase", "gcrma"] + "depends": ["Biobase", "affxparser", "affy", "gcrma"] }, "affyPLM": { "name": "affyPLM", "version": "1.80.0", "sha256": "1khknl7k45amyw58mcgw7kl511llyddw31qzwqc2l5c4j3bwnpz5", - "depends": ["affy", "Biobase", "BiocGenerics", "gcrma", "preprocessCore", "zlibbioc"] + "depends": ["Biobase", "BiocGenerics", "affy", "gcrma", "preprocessCore", "zlibbioc"] }, "affycomp": { "name": "affycomp", @@ -6469,7 +6493,7 @@ "name": "affycoretools", "version": "1.76.0", "sha256": "0w138n3f68ndr0innk981vf8p5wb729m31p0d3f9qp08hmv58jfw", - "depends": ["affy", "AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "edgeR", "gcrma", "ggplot2", "Glimma", "GOstats", "gplots", "hwriter", "lattice", "limma", "oligoClasses", "ReportingTools", "RSQLite", "S4Vectors", "xtable"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "GOstats", "Glimma", "RSQLite", "ReportingTools", "S4Vectors", "affy", "edgeR", "gcrma", "ggplot2", "gplots", "hwriter", "lattice", "limma", "oligoClasses", "xtable"] }, "affyio": { "name": "affyio", @@ -6481,13 +6505,13 @@ "name": "affylmGUI", "version": "1.78.0", "sha256": "1qilkr3dcl6driah24kgz7lrzamq08qp2z03inm2m4r5yx8811wc", - "depends": ["affy", "affyio", "affyPLM", "AnnotationDbi", "BiocGenerics", "BiocManager", "gcrma", "limma", "R2HTML", "tkrplot", "xtable"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocManager", "R2HTML", "affy", "affyPLM", "affyio", "gcrma", "limma", "tkrplot", "xtable"] }, "aggregateBioVar": { "name": "aggregateBioVar", "version": "1.14.0", "sha256": "0qag99chj7n7l0wbb8ar0f58xs6883rgddkgj7jnrrlj3acrm12v", - "depends": ["Matrix", "rlang", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "tibble"] + "depends": ["Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "rlang", "tibble"] }, "agilp": { "name": "agilp", @@ -6499,7 +6523,7 @@ "name": "airpart", "version": "1.12.0", "sha256": "05l5rgjfjln3kip72wj4ll4cgak9yz60xg6dgxxj690pxs1pw7bg", - "depends": ["apeglm", "clue", "ComplexHeatmap", "dplyr", "dynamicTreeCut", "emdbook", "forestplot", "ggplot2", "lpSolve", "matrixStats", "mclust", "pbapply", "plyr", "RColorBrewer", "rlang", "S4Vectors", "scater", "SingleCellExperiment", "smurf", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "apeglm", "clue", "dplyr", "dynamicTreeCut", "emdbook", "forestplot", "ggplot2", "lpSolve", "matrixStats", "mclust", "pbapply", "plyr", "rlang", "scater", "smurf"] }, "alabaster": { "name": "alabaster", @@ -6509,45 +6533,45 @@ }, "alabaster_base": { "name": "alabaster.base", - "version": "1.4.1", - "sha256": "1id8cs3m1kpcfmk9aa957vy7svf7aam4kzyzic36rxcqmarr130h", - "depends": ["alabaster_schemas", "jsonlite", "jsonvalidate", "Rcpp", "rhdf5", "Rhdf5lib", "S4Vectors"] + "version": "1.4.2", + "sha256": "1yf4j6dwva1d16fb8ss5hrpmj71azwjk9aqpad9wpnfapaldjzhb", + "depends": ["Rcpp", "Rhdf5lib", "S4Vectors", "alabaster_schemas", "jsonlite", "jsonvalidate", "rhdf5"] }, "alabaster_bumpy": { "name": "alabaster.bumpy", "version": "1.4.0", "sha256": "16q433asljnnx04b7q2a4ajhbsrzrqa35m6mcx9apg6q24iw869x", - "depends": ["alabaster_base", "BiocGenerics", "BumpyMatrix", "IRanges", "Matrix", "rhdf5", "S4Vectors"] + "depends": ["BiocGenerics", "BumpyMatrix", "IRanges", "Matrix", "S4Vectors", "alabaster_base", "rhdf5"] }, "alabaster_files": { "name": "alabaster.files", "version": "1.2.0", "sha256": "0mib4wix9ddgvhgff05gq2ijy6kyh884nv0j40rxzfkxqhp77gim", - "depends": ["alabaster_base", "BiocGenerics", "Rsamtools", "S4Vectors"] + "depends": ["BiocGenerics", "Rsamtools", "S4Vectors", "alabaster_base"] }, "alabaster_mae": { "name": "alabaster.mae", "version": "1.4.0", "sha256": "07w4q6dm4asrcdqynhdlxyaaf29s3ca8ij8iblwjnpgp9p5pbj6v", - "depends": ["alabaster_base", "alabaster_se", "jsonlite", "MultiAssayExperiment", "rhdf5", "S4Vectors"] + "depends": ["MultiAssayExperiment", "S4Vectors", "alabaster_base", "alabaster_se", "jsonlite", "rhdf5"] }, "alabaster_matrix": { "name": "alabaster.matrix", - "version": "1.4.0", - "sha256": "00k0lylyhz6glqhd463bbmmldqhv5i7an9nw95md7x2m43c9gzyk", - "depends": ["alabaster_base", "BiocGenerics", "DelayedArray", "HDF5Array", "Matrix", "Rcpp", "rhdf5", "S4Arrays", "S4Vectors", "SparseArray"] + "version": "1.4.2", + "sha256": "1b32qs2baq9s492a332vh1hpyxq62z16xj2w17m8wh8a4mcabry8", + "depends": ["BiocGenerics", "DelayedArray", "HDF5Array", "Matrix", "Rcpp", "S4Arrays", "S4Vectors", "SparseArray", "alabaster_base", "rhdf5"] }, "alabaster_ranges": { "name": "alabaster.ranges", - "version": "1.4.1", - "sha256": "0d3ygcn2sxkrdyjlwl98l50b0vqxrsp24vb029z5g8kjbvqhh5kr", - "depends": ["alabaster_base", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "rhdf5", "S4Vectors"] + "version": "1.4.2", + "sha256": "16r5wdlw2g9qnbvzpx5c5c04xa5dkwrmqlyc81iixkx6j98gsz2w", + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "alabaster_base", "rhdf5"] }, "alabaster_sce": { "name": "alabaster.sce", "version": "1.4.0", "sha256": "1i9nmivsfrd7fbb8njmwihfx4xpj4p3h5bnlj9fvk5308bbj3qcg", - "depends": ["alabaster_base", "alabaster_se", "jsonlite", "SingleCellExperiment"] + "depends": ["SingleCellExperiment", "alabaster_base", "alabaster_se", "jsonlite"] }, "alabaster_schemas": { "name": "alabaster.schemas", @@ -6559,49 +6583,49 @@ "name": "alabaster.se", "version": "1.4.1", "sha256": "134r4pwaa4nsmdgqxs16w3adn482zl70lgyd4s96pmx7hqm9i1vx", - "depends": ["alabaster_base", "alabaster_matrix", "alabaster_ranges", "BiocGenerics", "GenomicRanges", "IRanges", "jsonlite", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "alabaster_base", "alabaster_matrix", "alabaster_ranges", "jsonlite"] }, "alabaster_spatial": { "name": "alabaster.spatial", "version": "1.4.0", "sha256": "11mgs6smyiv4r5cajzqpw0k7q0jsm6xch1b5c9w7scl7d9bq981k", - "depends": ["alabaster_base", "alabaster_sce", "rhdf5", "S4Vectors", "SpatialExperiment"] + "depends": ["S4Vectors", "SpatialExperiment", "alabaster_base", "alabaster_sce", "rhdf5"] }, "alabaster_string": { "name": "alabaster.string", "version": "1.4.0", "sha256": "0p55dpfwjjikmgyq0vk9hmd6k0j3d2x4jjxd7wnabhga3vr4jg7q", - "depends": ["alabaster_base", "Biostrings", "S4Vectors"] + "depends": ["Biostrings", "S4Vectors", "alabaster_base"] }, "alabaster_vcf": { "name": "alabaster.vcf", "version": "1.4.0", "sha256": "1ry5gim6kkis8wy0v1afv44ay6nw8m9nd6jl89980z499pblf9j4", - "depends": ["alabaster_base", "alabaster_se", "alabaster_string", "Rsamtools", "S4Vectors", "VariantAnnotation"] + "depends": ["Rsamtools", "S4Vectors", "VariantAnnotation", "alabaster_base", "alabaster_se", "alabaster_string"] }, "alevinQC": { "name": "alevinQC", "version": "1.20.0", "sha256": "1pq42lvgggysg28ngxipqb1l7jfj498nxpg40h02siz6nb6inbdw", - "depends": ["cowplot", "dplyr", "DT", "GGally", "ggplot2", "Rcpp", "rjson", "rlang", "rmarkdown", "shiny", "shinydashboard", "tximport"] + "depends": ["DT", "GGally", "Rcpp", "cowplot", "dplyr", "ggplot2", "rjson", "rlang", "rmarkdown", "shiny", "shinydashboard", "tximport"] }, "altcdfenvs": { "name": "altcdfenvs", "version": "2.66.0", "sha256": "08k3j3dc93vg5c9ccw7mc4fri9xbdj7rdjyj0h6ig0s5866fqvlb", - "depends": ["affy", "Biobase", "BiocGenerics", "Biostrings", "hypergraph", "makecdfenv", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "S4Vectors", "affy", "hypergraph", "makecdfenv"] }, "amplican": { "name": "amplican", "version": "1.26.0", "sha256": "1nbyivd5020kqkmk5ngpaixhdxgmqpifaxnfgq6yc2njqizgbhxy", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "cluster", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggthemes", "gridExtra", "gtable", "IRanges", "knitr", "Matrix", "matrixStats", "pwalign", "Rcpp", "rmarkdown", "S4Vectors", "ShortRead", "stringr", "waffle"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "S4Vectors", "ShortRead", "cluster", "data_table", "dplyr", "ggplot2", "ggthemes", "gridExtra", "gtable", "knitr", "matrixStats", "pwalign", "rmarkdown", "stringr", "waffle"] }, "animalcules": { "name": "animalcules", "version": "1.20.0", "sha256": "1g073n8nmckd388hy9gfiddil53wv692k69ywjc85jyp5jy2n265", - "depends": ["ape", "assertthat", "caret", "covr", "DESeq2", "dplyr", "DT", "forcats", "ggforce", "ggplot2", "GUniFrac", "lattice", "limma", "magrittr", "Matrix", "MultiAssayExperiment", "plotly", "rentrez", "reshape2", "ROCit", "S4Vectors", "scales", "shiny", "shinyjs", "SummarizedExperiment", "tibble", "tidyr", "tsne", "umap", "vegan", "XML"] + "depends": ["DESeq2", "DT", "GUniFrac", "Matrix", "MultiAssayExperiment", "ROCit", "S4Vectors", "SummarizedExperiment", "XML", "ape", "assertthat", "caret", "covr", "dplyr", "forcats", "ggforce", "ggplot2", "lattice", "limma", "magrittr", "plotly", "rentrez", "reshape2", "scales", "shiny", "shinyjs", "tibble", "tidyr", "tsne", "umap", "vegan"] }, "annaffy": { "name": "annaffy", @@ -6613,13 +6637,13 @@ "name": "annmap", "version": "1.46.0", "sha256": "1xijcm0c19wj2yknrlsz2ifm097z32rc58k608482686srj0bg2i", - "depends": ["Biobase", "BiocGenerics", "DBI", "digest", "genefilter", "GenomicRanges", "IRanges", "lattice", "RMySQL", "Rsamtools"] + "depends": ["Biobase", "BiocGenerics", "DBI", "GenomicRanges", "IRanges", "RMySQL", "Rsamtools", "digest", "genefilter", "lattice"] }, "annotate": { "name": "annotate", "version": "1.82.0", "sha256": "1v4sq22lwrhl50whag0jil788wwvi4rpdaij03iwak93q998ls0f", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "httr", "XML", "xtable"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "XML", "httr", "xtable"] }, "annotationTools": { "name": "annotationTools", @@ -6631,7 +6655,7 @@ "name": "annotatr", "version": "1.30.0", "sha256": "11cc3nknbckm0v5r7dzgqzw0137w4c08ab10s9svb1y02z45a0qz", - "depends": ["AnnotationDbi", "AnnotationHub", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "readr", "regioneR", "reshape2", "rtracklayer", "S4Vectors"] + "depends": ["AnnotationDbi", "AnnotationHub", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "dplyr", "ggplot2", "readr", "regioneR", "reshape2", "rtracklayer"] }, "anota": { "name": "anota", @@ -6643,7 +6667,7 @@ "name": "anota2seq", "version": "1.26.0", "sha256": "140k37wswl4w2136pz9y0z82sphzxmgzgk3cr400kkm39wjn7vxm", - "depends": ["DESeq2", "edgeR", "limma", "multtest", "qvalue", "RColorBrewer", "SummarizedExperiment"] + "depends": ["DESeq2", "RColorBrewer", "SummarizedExperiment", "edgeR", "limma", "multtest", "qvalue"] }, "antiProfiles": { "name": "antiProfiles", @@ -6655,73 +6679,73 @@ "name": "apComplex", "version": "2.70.0", "sha256": "1fsqrds5r8bhdf7fbnw6rf3vqapl6xk1a5l6jjb98raxmjsrfyqs", - "depends": ["graph", "org_Sc_sgd_db", "RBGL", "Rgraphviz"] + "depends": ["RBGL", "Rgraphviz", "graph", "org_Sc_sgd_db"] }, "apeglm": { "name": "apeglm", "version": "1.26.1", "sha256": "039my876v0k2mr50w90w3phj4cq55awf5ks07kr2fnm7w211gxvs", - "depends": ["emdbook", "GenomicRanges", "Rcpp", "RcppEigen", "RcppNumerical", "SummarizedExperiment"] + "depends": ["GenomicRanges", "Rcpp", "RcppEigen", "RcppNumerical", "SummarizedExperiment", "emdbook"] }, "appreci8R": { "name": "appreci8R", "version": "1.22.0", "sha256": "1nwb7475lhclyd0jdwm0sp1wh2rgs2h16k4hin6z44axix5v7jhr", - "depends": ["Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "COSMIC_67", "DT", "GenomicFeatures", "GenomicRanges", "GenomicScores", "Homo_sapiens", "IRanges", "MafDb_1Kgenomes_phase3_hs37d5", "MafDb_ExAC_r1_0_hs37d5", "MafDb_gnomADex_r2_1_hs37d5", "openxlsx", "PolyPhen_Hsapiens_dbSNP131", "rentrez", "Rsamtools", "S4Vectors", "seqinr", "shiny", "shinyjs", "SIFT_Hsapiens_dbSNP137", "SNPlocs_Hsapiens_dbSNP144_GRCh37", "stringr", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation", "XtraSNPlocs_Hsapiens_dbSNP144_GRCh37"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "Biostrings", "COSMIC_67", "DT", "GenomicFeatures", "GenomicRanges", "GenomicScores", "Homo_sapiens", "IRanges", "MafDb_1Kgenomes_phase3_hs37d5", "MafDb_ExAC_r1_0_hs37d5", "MafDb_gnomADex_r2_1_hs37d5", "PolyPhen_Hsapiens_dbSNP131", "Rsamtools", "S4Vectors", "SIFT_Hsapiens_dbSNP137", "SNPlocs_Hsapiens_dbSNP144_GRCh37", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation", "XtraSNPlocs_Hsapiens_dbSNP144_GRCh37", "openxlsx", "rentrez", "seqinr", "shiny", "shinyjs", "stringr"] }, "aroma_light": { "name": "aroma.light", "version": "3.34.0", "sha256": "1v24b43knsjpw44zkrzv8pvxjiw12rcz9wqp4ahd88dg23j7pvwz", - "depends": ["matrixStats", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_methodsS3", "R_oo", "R_utils", "matrixStats"] }, "arrayMvout": { "name": "arrayMvout", "version": "1.62.0", "sha256": "11v3s972nyahdswqdcab0fj9jb73vd5dnd5kfb09572y4z0hn5xw", - "depends": ["affy", "affyContam", "Biobase", "lumi", "mdqc", "parody"] + "depends": ["Biobase", "affy", "affyContam", "lumi", "mdqc", "parody"] }, "arrayQuality": { "name": "arrayQuality", "version": "1.82.0", "sha256": "0wmczy2wdxki9pam9q6ly5clvqbl018v1ar4zkdm8algjddyc2cp", - "depends": ["gridBase", "hexbin", "limma", "marray", "RColorBrewer"] + "depends": ["RColorBrewer", "gridBase", "hexbin", "limma", "marray"] }, "arrayQualityMetrics": { "name": "arrayQualityMetrics", "version": "3.60.0", "sha256": "04y1vbpxqhqn1vsyqmscikaxn6wshsk4krcqzf2baf9x4azbdjk1", - "depends": ["affy", "affyPLM", "beadarray", "Biobase", "genefilter", "gridSVG", "Hmisc", "hwriter", "lattice", "latticeExtra", "limma", "RColorBrewer", "setRNG", "svglite", "vsn", "XML"] + "depends": ["Biobase", "Hmisc", "RColorBrewer", "XML", "affy", "affyPLM", "beadarray", "genefilter", "gridSVG", "hwriter", "lattice", "latticeExtra", "limma", "setRNG", "svglite", "vsn"] }, "artMS": { "name": "artMS", "version": "1.22.0", "sha256": "11a6igby8kz2r5wawrsisz22v4hak9004zr8y87v3pp92rnvb3ma", - "depends": ["AnnotationDbi", "bit64", "circlize", "cluster", "corrplot", "data_table", "dplyr", "getopt", "ggdendro", "ggplot2", "ggrepel", "gplots", "limma", "MSstats", "openxlsx", "org_Hs_eg_db", "pheatmap", "plotly", "plyr", "RColorBrewer", "scales", "seqinr", "stringr", "tidyr", "UpSetR", "VennDiagram", "yaml"] + "depends": ["AnnotationDbi", "MSstats", "RColorBrewer", "UpSetR", "VennDiagram", "bit64", "circlize", "cluster", "corrplot", "data_table", "dplyr", "getopt", "ggdendro", "ggplot2", "ggrepel", "gplots", "limma", "openxlsx", "org_Hs_eg_db", "pheatmap", "plotly", "plyr", "scales", "seqinr", "stringr", "tidyr", "yaml"] }, "atSNP": { "name": "atSNP", "version": "1.20.0", "sha256": "08pcbys8iy8wzqzzvlnwc3qw7m7cswkqa3x2x2x8m4ni1s4isd6z", - "depends": ["BiocFileCache", "BiocParallel", "BSgenome", "data_table", "ggplot2", "lifecycle", "motifStack", "rappdirs", "Rcpp", "testthat"] + "depends": ["BSgenome", "BiocFileCache", "BiocParallel", "Rcpp", "data_table", "ggplot2", "lifecycle", "motifStack", "rappdirs", "testthat"] }, "atena": { "name": "atena", "version": "1.10.0", "sha256": "1y2v8mi9awgfbcawpcir01qglxn0bdgj6v2dsdqp6if25cizl3sr", - "depends": ["AnnotationHub", "BiocGenerics", "BiocParallel", "cli", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "matrixStats", "Rsamtools", "S4Vectors", "sparseMatrixStats", "SQUAREM", "SummarizedExperiment"] + "depends": ["AnnotationHub", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "Rsamtools", "S4Vectors", "SQUAREM", "SummarizedExperiment", "cli", "matrixStats", "sparseMatrixStats"] }, "attract": { "name": "attract", "version": "1.56.0", "sha256": "08l634sk6y06y2m78vsd0ld4w3h6qvx4hk6wkqflkl9jjyqpx8jy", - "depends": ["AnnotationDbi", "Biobase", "cluster", "GOstats", "KEGGREST", "limma", "org_Hs_eg_db", "reactome_db"] + "depends": ["AnnotationDbi", "Biobase", "GOstats", "KEGGREST", "cluster", "limma", "org_Hs_eg_db", "reactome_db"] }, "autonomics": { "name": "autonomics", "version": "1.12.1", "sha256": "1fzzj0v6v4jvr3wh5bnjr6h2ny8zfm9pdlbhq5syaa2plvsbblpy", - "depends": ["abind", "BiocFileCache", "BiocGenerics", "bit64", "codingMatrices", "colorspace", "data_table", "dplyr", "edgeR", "ggforce", "ggplot2", "ggrepel", "gridExtra", "limma", "magrittr", "matrixStats", "MultiAssayExperiment", "R_utils", "RColorBrewer", "readxl", "rlang", "S4Vectors", "scales", "stringi", "SummarizedExperiment", "tidyr", "tidyselect", "vsn"] + "depends": ["BiocFileCache", "BiocGenerics", "MultiAssayExperiment", "RColorBrewer", "R_utils", "S4Vectors", "SummarizedExperiment", "abind", "bit64", "codingMatrices", "colorspace", "data_table", "dplyr", "edgeR", "ggforce", "ggplot2", "ggrepel", "gridExtra", "limma", "magrittr", "matrixStats", "readxl", "rlang", "scales", "stringi", "tidyr", "tidyselect", "vsn"] }, "awst": { "name": "awst", @@ -6739,13 +6763,13 @@ "name": "ballgown", "version": "2.36.0", "sha256": "0x3avbqf0ipmb70szf2chhbdg14ba2hwhyyz0wd66c1qwfk6aj9v", - "depends": ["Biobase", "GenomeInfoDb", "GenomicRanges", "IRanges", "limma", "RColorBrewer", "rtracklayer", "S4Vectors", "sva"] + "depends": ["Biobase", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "limma", "rtracklayer", "sva"] }, "bambu": { "name": "bambu", "version": "3.6.0", "sha256": "1pn6a74nvcpn0xzfb8167hbc6pdma0ybhh7kjpqdl4hgjp446w5w", - "depends": ["BiocGenerics", "BiocParallel", "BSgenome", "data_table", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "SummarizedExperiment", "tidyr", "xgboost"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "tidyr", "xgboost"] }, "bamsignals": { "name": "bamsignals", @@ -6757,7 +6781,7 @@ "name": "bandle", "version": "1.8.0", "sha256": "0lkmwr207s26kxmhfcsay4mb3fg70wjcrhhjj82g5yjrycmjidm9", - "depends": ["BH", "Biobase", "BiocParallel", "BiocStyle", "circlize", "dplyr", "ggalluvial", "ggplot2", "ggrepel", "knitr", "lbfgs", "MSnbase", "plyr", "pRoloc", "pRolocdata", "Rcpp", "RcppArmadillo", "rlang", "robustbase", "S4Vectors", "tidyr"] + "depends": ["BH", "Biobase", "BiocParallel", "BiocStyle", "MSnbase", "Rcpp", "RcppArmadillo", "S4Vectors", "circlize", "dplyr", "ggalluvial", "ggplot2", "ggrepel", "knitr", "lbfgs", "pRoloc", "pRolocdata", "plyr", "rlang", "robustbase", "tidyr"] }, "banocc": { "name": "banocc", @@ -6769,13 +6793,13 @@ "name": "barcodetrackR", "version": "1.12.0", "sha256": "0x0fpa44lyww2l1rdc35pdlgczz4y1vxjbn0s1frlpaacmqcxrly", - "depends": ["circlize", "cowplot", "dplyr", "ggdendro", "ggplot2", "ggridges", "magrittr", "plyr", "proxy", "RColorBrewer", "rlang", "S4Vectors", "scales", "shiny", "SummarizedExperiment", "tibble", "tidyr", "vegan", "viridis"] + "depends": ["RColorBrewer", "S4Vectors", "SummarizedExperiment", "circlize", "cowplot", "dplyr", "ggdendro", "ggplot2", "ggridges", "magrittr", "plyr", "proxy", "rlang", "scales", "shiny", "tibble", "tidyr", "vegan", "viridis"] }, "basecallQC": { "name": "basecallQC", "version": "1.28.0", "sha256": "033agi9xcyr2mpryyqjzd1diinv3cnam6f13qw4xfg0fncn0rm83", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "knitr", "lazyeval", "magrittr", "prettydoc", "raster", "rmarkdown", "ShortRead", "stringr", "tidyr", "XML", "yaml"] + "depends": ["DT", "ShortRead", "XML", "data_table", "dplyr", "ggplot2", "knitr", "lazyeval", "magrittr", "prettydoc", "raster", "rmarkdown", "stringr", "tidyr", "yaml"] }, "basilisk": { "name": "basilisk", @@ -6793,19 +6817,19 @@ "name": "batchelor", "version": "1.20.0", "sha256": "1h70rm0h711ndj9kz3q10yd9f6npjiwvk9wmkg6w3pdgjni1nrl0", - "depends": ["beachmat", "BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "igraph", "Matrix", "Rcpp", "ResidualMatrix", "S4Vectors", "ScaledMatrix", "scuttle", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "Rcpp", "ResidualMatrix", "S4Vectors", "ScaledMatrix", "SingleCellExperiment", "SummarizedExperiment", "beachmat", "igraph", "scuttle"] }, "bayNorm": { "name": "bayNorm", "version": "1.22.0", "sha256": "0b05446vcqxr7smxyhmvl6rxlckzzgqhf5v1059657kihhscqr7s", - "depends": ["BB", "BiocParallel", "doSNOW", "fitdistrplus", "foreach", "iterators", "locfit", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BB", "BiocParallel", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "SingleCellExperiment", "SummarizedExperiment", "doSNOW", "fitdistrplus", "foreach", "iterators", "locfit"] }, "baySeq": { "name": "baySeq", "version": "2.38.0", "sha256": "0nlkynzijxl6f8983vdpmcssvrpjf6s42zx3lxfwxwlhrvz1yg9l", - "depends": ["abind", "edgeR", "GenomicRanges"] + "depends": ["GenomicRanges", "abind", "edgeR"] }, "bcSeq": { "name": "bcSeq", @@ -6823,55 +6847,55 @@ "name": "beachmat.hdf5", "version": "1.2.0", "sha256": "1qjib3vw0b0nvfx3j5nfgwikcmc5jq49ddahv05arhdabd40vmg4", - "depends": ["beachmat", "DelayedArray", "HDF5Array", "Rcpp", "Rhdf5lib"] + "depends": ["DelayedArray", "HDF5Array", "Rcpp", "Rhdf5lib", "beachmat"] }, "beadarray": { "name": "beadarray", "version": "2.54.0", "sha256": "0yda6maj985k374bh6zkrs8qffw1jrz9gc3mja07ibyn4pvzkclq", - "depends": ["AnnotationDbi", "BeadDataPackR", "Biobase", "BiocGenerics", "GenomicRanges", "ggplot2", "hexbin", "illuminaio", "IRanges", "limma", "reshape2"] + "depends": ["AnnotationDbi", "BeadDataPackR", "Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "ggplot2", "hexbin", "illuminaio", "limma", "reshape2"] }, "beer": { "name": "beer", "version": "1.8.0", "sha256": "1b7pw7nwpryrdji14y9cbv03f8g8r8lzf1fd72ff2b69csp993ww", - "depends": ["BiocParallel", "cli", "edgeR", "PhIPData", "progressr", "rjags", "SummarizedExperiment"] + "depends": ["BiocParallel", "PhIPData", "SummarizedExperiment", "cli", "edgeR", "progressr", "rjags"] }, "benchdamic": { "name": "benchdamic", "version": "1.10.0", "sha256": "040lkmwz51za2biqlf3z3ai5j03rmw15kwz3i3v10rzq0322fsk3", - "depends": ["ALDEx2", "ANCOMBC", "BiocParallel", "corncob", "cowplot", "dearseq", "DESeq2", "edgeR", "ggdendro", "ggplot2", "ggridges", "GUniFrac", "limma", "lme4", "Maaslin2", "MAST", "metagenomeSeq", "MGLM", "MicrobiomeStat", "mixOmics", "NOISeq", "phyloseq", "plyr", "RColorBrewer", "reshape2", "Seurat", "SummarizedExperiment", "tidytext", "TreeSummarizedExperiment", "zinbwave"] + "depends": ["ALDEx2", "ANCOMBC", "BiocParallel", "DESeq2", "GUniFrac", "MAST", "MGLM", "Maaslin2", "MicrobiomeStat", "NOISeq", "RColorBrewer", "Seurat", "SummarizedExperiment", "TreeSummarizedExperiment", "corncob", "cowplot", "dearseq", "edgeR", "ggdendro", "ggplot2", "ggridges", "limma", "lme4", "metagenomeSeq", "mixOmics", "phyloseq", "plyr", "reshape2", "tidytext", "zinbwave"] }, "betaHMM": { "name": "betaHMM", "version": "1.0.0", "sha256": "1dwdjfvca22gaz0qjngf3fc32bpybz1dvvbwd91wgznzk7wjk6yq", - "depends": ["cowplot", "doParallel", "dplyr", "foreach", "GenomicRanges", "ggplot2", "pROC", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tidyr", "tidyselect"] + "depends": ["GenomicRanges", "S4Vectors", "SummarizedExperiment", "cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "pROC", "scales", "stringr", "tidyr", "tidyselect"] }, "bettr": { "name": "bettr", "version": "1.0.0", "sha256": "19z7df9kmk4zfbljlq5ginl82zml37iyjnjm0fqinm2b9i1ww432", - "depends": ["bslib", "circlize", "ComplexHeatmap", "cowplot", "dplyr", "DT", "ggplot2", "Hmisc", "rlang", "S4Vectors", "scales", "shiny", "shinyjqui", "sortable", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["ComplexHeatmap", "DT", "Hmisc", "S4Vectors", "SummarizedExperiment", "bslib", "circlize", "cowplot", "dplyr", "ggplot2", "rlang", "scales", "shiny", "shinyjqui", "sortable", "tibble", "tidyr"] }, "bgx": { "name": "bgx", "version": "1.70.0", "sha256": "0sglk8q12fvqk6m699v3lajwr1zb8wnrldfv2n8y7jjy2fqcvs19", - "depends": ["affy", "Biobase", "gcrma", "Rcpp"] + "depends": ["Biobase", "Rcpp", "affy", "gcrma"] }, "bigmelon": { "name": "bigmelon", "version": "1.30.0", "sha256": "0fa1dwbk6hdiwg6dmbks7hy4cg3ydyd2sv94cyl0003awhf00nn9", - "depends": ["Biobase", "BiocGenerics", "gdsfmt", "GEOquery", "illuminaio", "methylumi", "minfi", "wateRmelon"] + "depends": ["Biobase", "BiocGenerics", "GEOquery", "gdsfmt", "illuminaio", "methylumi", "minfi", "wateRmelon"] }, "bioCancer": { "name": "bioCancer", "version": "1.32.0", "sha256": "0mwmdavakmrfa7d7h0h14lkk6k7ps3g8hvbja1hq01nkdfy7imvp", - "depends": ["AlgDesign", "AnnotationDbi", "Biobase", "cBioPortalData", "clusterProfiler", "DiagrammeR", "DOSE", "dplyr", "DT", "geNetClassifier", "GO_db", "htmlwidgets", "org_Bt_eg_db", "org_Hs_eg_db", "plyr", "r_import", "R_methodsS3", "R_oo", "radiant_data", "reactome_db", "ReactomePA", "shiny", "shinythemes", "tibble", "tidyr", "visNetwork", "XML"] + "depends": ["AlgDesign", "AnnotationDbi", "Biobase", "DOSE", "DT", "DiagrammeR", "GO_db", "R_methodsS3", "R_oo", "ReactomePA", "XML", "cBioPortalData", "clusterProfiler", "dplyr", "geNetClassifier", "htmlwidgets", "org_Bt_eg_db", "org_Hs_eg_db", "plyr", "r_import", "radiant_data", "reactome_db", "shiny", "shinythemes", "tibble", "tidyr", "visNetwork"] }, "bioDist": { "name": "bioDist", @@ -6883,7 +6907,7 @@ "name": "bioassayR", "version": "1.42.0", "sha256": "0rckhgg73cgz0ppqaywc7nvbnp1is6cyjfa7dn2l32xxrcl57pq6", - "depends": ["BiocGenerics", "ChemmineR", "DBI", "Matrix", "rjson", "RSQLite", "XML"] + "depends": ["BiocGenerics", "ChemmineR", "DBI", "Matrix", "RSQLite", "XML", "rjson"] }, "biobroom": { "name": "biobroom", @@ -6901,13 +6925,13 @@ "name": "biocGraph", "version": "1.66.0", "sha256": "0ji6pa8wfj57drpnp03vgas1pird84g15nnp6469jmx773izhfq0", - "depends": ["BiocGenerics", "geneplotter", "graph", "Rgraphviz"] + "depends": ["BiocGenerics", "Rgraphviz", "geneplotter", "graph"] }, "biocViews": { "name": "biocViews", "version": "1.72.0", "sha256": "10j9s50ppfx8r752wkabls0n4gxp17z7dnaf352f3dcdbfa8ijh5", - "depends": ["Biobase", "BiocManager", "graph", "RBGL", "RCurl", "RUnit", "XML"] + "depends": ["Biobase", "BiocManager", "RBGL", "RCurl", "RUnit", "XML", "graph"] }, "biocroxytest": { "name": "biocroxytest", @@ -6925,67 +6949,67 @@ "name": "biodb", "version": "1.12.0", "sha256": "0zkd6505q0myc5l9d69i1fvfhcrjqxkv208p84zr5p7xi8jmg3dw", - "depends": ["BiocFileCache", "chk", "git2r", "jsonlite", "lgr", "lifecycle", "openssl", "plyr", "progress", "R6", "rappdirs", "Rcpp", "RCurl", "RSQLite", "stringr", "testthat", "withr", "XML", "yaml"] + "depends": ["BiocFileCache", "R6", "RCurl", "RSQLite", "Rcpp", "XML", "chk", "git2r", "jsonlite", "lgr", "lifecycle", "openssl", "plyr", "progress", "rappdirs", "stringr", "testthat", "withr", "yaml"] }, "biodbChebi": { "name": "biodbChebi", "version": "1.10.0", "sha256": "1w3mnryv1x5a68llnpqfdsrkzwrwq2b7n6hm458gfkw6ql070109", - "depends": ["biodb", "R6"] + "depends": ["R6", "biodb"] }, "biodbExpasy": { "name": "biodbExpasy", - "version": "1.8.0", - "sha256": "1amzff4ndadialm5rhzy267c24h5fmh9w9w109zsbw8sixl0s0sd", - "depends": ["biodb", "chk", "R6", "stringr"] + "version": "1.8.1", + "sha256": "0n5avxhv5131122h18d3r2v9c64i3nb251hmz8hhc6chmk203fmj", + "depends": ["R6", "biodb", "chk", "stringr"] }, "biodbHmdb": { "name": "biodbHmdb", - "version": "1.10.0", - "sha256": "0xf63zj1bpkaymv3psvrkibjbirqb7bych95p4l5crsg8af730ra", - "depends": ["biodb", "R6", "Rcpp", "testthat", "zip"] + "version": "1.10.1", + "sha256": "14g5c043rgwp259z5km4wvl5h9810fxpsja4wmk326plqpnqhcjr", + "depends": ["R6", "Rcpp", "biodb", "testthat", "zip"] }, "biodbKegg": { "name": "biodbKegg", - "version": "1.10.0", - "sha256": "065a0c62xbbqc73gbcqcwfv1jyyy025dppjq93l0ic4qshh9kg79", - "depends": ["biodb", "chk", "lifecycle", "R6"] + "version": "1.10.2", + "sha256": "0rwxbg3ij5rg3agzsxib7f80b05ar40xnql2krl44c3n43yqkwyw", + "depends": ["R6", "biodb", "chk", "lifecycle"] }, "biodbLipidmaps": { "name": "biodbLipidmaps", "version": "1.10.0", "sha256": "1p181kwy9q8jj4m7flg71pqn7h6865hbwha4n6j2qki830vym6rv", - "depends": ["biodb", "lifecycle", "R6"] + "depends": ["R6", "biodb", "lifecycle"] }, "biodbNcbi": { "name": "biodbNcbi", "version": "1.8.0", "sha256": "01v0lym2kldcjypqsx9b8k8hvxdmnr1rsczdzl87nsax22q6g9hc", - "depends": ["biodb", "chk", "R6", "XML"] + "depends": ["R6", "XML", "biodb", "chk"] }, "biodbNci": { "name": "biodbNci", "version": "1.8.0", "sha256": "11xzf804v9dp25zw7kxwws2q386h22ybibrcplm3wrkrxj223kks", - "depends": ["biodb", "chk", "R6", "Rcpp", "testthat"] + "depends": ["R6", "Rcpp", "biodb", "chk", "testthat"] }, "biodbUniprot": { "name": "biodbUniprot", "version": "1.10.0", "sha256": "1jwv6y9kaq2d7iswgz602yhwg35c9d9yqa9c87d454n0wrl6h6yg", - "depends": ["biodb", "R6"] + "depends": ["R6", "biodb"] }, "biomaRt": { "name": "biomaRt", - "version": "2.60.0", - "sha256": "0vsjldksykgs6z7afn8kbqzl489irvvzrzq75kqkhavyhxnavqkq", + "version": "2.60.1", + "sha256": "0mzdxpagxwiwyznhd7h93cgy01a2j85rgb5dpnkzgp4sxw01n7rb", "depends": ["AnnotationDbi", "BiocFileCache", "digest", "httr2", "progress", "rappdirs", "stringr", "xml2"] }, "biomformat": { "name": "biomformat", "version": "1.32.0", "sha256": "0jys0nmp833ax96vfdh1adikpyapr5gkmldx5kvv5bqiqc8aipzb", - "depends": ["jsonlite", "Matrix", "plyr", "rhdf5"] + "depends": ["Matrix", "jsonlite", "plyr", "rhdf5"] }, "biomvRCNS": { "name": "biomvRCNS", @@ -6997,85 +7021,85 @@ "name": "biosigner", "version": "1.32.0", "sha256": "1c56s8lr5cdx27v0rdi4l4h680x6ga9wazf4dj1xkqyliqz65ps5", - "depends": ["Biobase", "e1071", "MultiAssayExperiment", "MultiDataSet", "randomForest", "ropls", "SummarizedExperiment"] + "depends": ["Biobase", "MultiAssayExperiment", "MultiDataSet", "SummarizedExperiment", "e1071", "randomForest", "ropls"] }, "biotmle": { "name": "biotmle", "version": "1.28.0", "sha256": "06kixhzkrzxyic44kdmqrv19v2c4a7sri8cbhbvww8km4n5l39sf", - "depends": ["assertthat", "BiocGenerics", "BiocParallel", "dplyr", "drtmle", "ggplot2", "ggsci", "limma", "S4Vectors", "SummarizedExperiment", "superheat", "tibble"] + "depends": ["BiocGenerics", "BiocParallel", "S4Vectors", "SummarizedExperiment", "assertthat", "dplyr", "drtmle", "ggplot2", "ggsci", "limma", "superheat", "tibble"] }, "biovizBase": { "name": "biovizBase", "version": "1.52.0", "sha256": "1jbcnjjwdjy7zfy0ybgfy1y5ym7rygzkailr5bm4hnh9bn2837p7", - "depends": ["AnnotationDbi", "AnnotationFilter", "BiocGenerics", "Biostrings", "dichromat", "ensembldb", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Hmisc", "IRanges", "RColorBrewer", "rlang", "Rsamtools", "S4Vectors", "scales", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["AnnotationDbi", "AnnotationFilter", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Hmisc", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "dichromat", "ensembldb", "rlang", "scales"] }, "biscuiteer": { "name": "biscuiteer", "version": "1.18.0", "sha256": "15bisrcgyiv9ndfvgm0p4igyr4jwsf68ccis1nf1hi9x291k7m6y", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "biscuiteerData", "bsseq", "data_table", "DelayedMatrixStats", "dmrseq", "GenomeInfoDb", "GenomicRanges", "gtools", "HDF5Array", "Homo_sapiens", "impute", "IRanges", "Matrix", "matrixStats", "Mus_musculus", "QDNAseq", "qualV", "R_utils", "readr", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "Homo_sapiens", "IRanges", "Matrix", "Mus_musculus", "QDNAseq", "R_utils", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "biscuiteerData", "bsseq", "data_table", "dmrseq", "gtools", "impute", "matrixStats", "qualV", "readr", "rtracklayer"] }, "blacksheepr": { "name": "blacksheepr", "version": "1.18.0", "sha256": "1avqq6m30x2bg3h32laxcpbd4f5s10548k3cj4xb1d25svnn8pax", - "depends": ["circlize", "ComplexHeatmap", "pasilla", "RColorBrewer", "SummarizedExperiment", "viridis"] + "depends": ["ComplexHeatmap", "RColorBrewer", "SummarizedExperiment", "circlize", "pasilla", "viridis"] }, "blima": { "name": "blima", "version": "1.38.0", "sha256": "1a5rzwgsvkwzl97p6pvbhi8dsvd7vbny0bajjp273czrm09yk8rc", - "depends": ["beadarray", "Biobase", "BiocGenerics", "Rcpp"] + "depends": ["Biobase", "BiocGenerics", "Rcpp", "beadarray"] }, "bluster": { "name": "bluster", "version": "1.14.0", "sha256": "1bj7wx2dnwbrv2gxcmqmq815vawfiqj2xy3624fjli11r8c1hywa", - "depends": ["BiocNeighbors", "BiocParallel", "cluster", "igraph", "Matrix", "Rcpp", "S4Vectors"] + "depends": ["BiocNeighbors", "BiocParallel", "Matrix", "Rcpp", "S4Vectors", "cluster", "igraph"] }, "bnbc": { "name": "bnbc", "version": "1.26.0", "sha256": "09vy9igcnw927j0zb4znrbcknkaic69ly6w4syb1cwysr0rvmrdz", - "depends": ["BiocGenerics", "data_table", "EBImage", "GenomeInfoDb", "GenomicRanges", "HiCBricks", "IRanges", "matrixStats", "preprocessCore", "Rcpp", "rhdf5", "S4Vectors", "SummarizedExperiment", "sva"] + "depends": ["BiocGenerics", "EBImage", "GenomeInfoDb", "GenomicRanges", "HiCBricks", "IRanges", "Rcpp", "S4Vectors", "SummarizedExperiment", "data_table", "matrixStats", "preprocessCore", "rhdf5", "sva"] }, "bnem": { "name": "bnem", "version": "1.12.0", "sha256": "15jzsba3qdkj5y7gqxklgv69r5bq2li4irvjkhmbjnjlv0pv4wdg", - "depends": ["affy", "binom", "Biobase", "CellNOptR", "cluster", "epiNEM", "flexclust", "graph", "limma", "matrixStats", "mnem", "RColorBrewer", "Rgraphviz", "rmarkdown", "snowfall", "sva", "vsn"] + "depends": ["Biobase", "CellNOptR", "RColorBrewer", "Rgraphviz", "affy", "binom", "cluster", "epiNEM", "flexclust", "graph", "limma", "matrixStats", "mnem", "rmarkdown", "snowfall", "sva", "vsn"] }, "borealis": { "name": "borealis", "version": "1.8.0", "sha256": "1m7yq1sx4ivbcrjm1w3l5qsyhlv0jdkb5l91kxd5hvisakfdrfz9", - "depends": ["Biobase", "bsseq", "cowplot", "doParallel", "dplyr", "DSS", "foreach", "gamlss", "gamlss_dist", "GenomicRanges", "ggplot2", "plyr", "purrr", "R_utils", "rlang", "snow"] + "depends": ["Biobase", "DSS", "GenomicRanges", "R_utils", "bsseq", "cowplot", "doParallel", "dplyr", "foreach", "gamlss", "gamlss_dist", "ggplot2", "plyr", "purrr", "rlang", "snow"] }, "branchpointer": { "name": "branchpointer", "version": "1.30.0", "sha256": "034sa73ll152s24cgrz47br7kyswr7jn6c735mp6dvbhppmlj2xm", - "depends": ["biomaRt", "Biostrings", "BSgenome_Hsapiens_UCSC_hg38", "caret", "cowplot", "data_table", "gbm", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "kernlab", "plyr", "rtracklayer", "S4Vectors", "stringr"] + "depends": ["BSgenome_Hsapiens_UCSC_hg38", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "biomaRt", "caret", "cowplot", "data_table", "gbm", "ggplot2", "kernlab", "plyr", "rtracklayer", "stringr"] }, "breakpointR": { "name": "breakpointR", "version": "1.22.0", "sha256": "0imbsqrslclvfyvc00sv6ngvl5hqlr6ian07v521m63ffpx6ll78", - "depends": ["BiocGenerics", "breakpointRdata", "cowplot", "doParallel", "foreach", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "gtools", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "breakpointRdata", "cowplot", "doParallel", "foreach", "ggplot2", "gtools"] }, "brendaDb": { "name": "brendaDb", "version": "1.18.0", "sha256": "1rhmd3v20y2cw70zpzykpz7bidf000dq904c2qlf58nqwclxj88l", - "depends": ["BiocFileCache", "BiocParallel", "crayon", "dplyr", "magrittr", "purrr", "rappdirs", "Rcpp", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["BiocFileCache", "BiocParallel", "Rcpp", "crayon", "dplyr", "magrittr", "purrr", "rappdirs", "rlang", "stringr", "tibble", "tidyr"] }, "bsseq": { "name": "bsseq", "version": "1.40.0", "sha256": "1b7a9ryl4lz6qy2pni3k9bk6hdf147s3m7fx0icg6fkgi0ymssyx", - "depends": ["beachmat", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "data_table", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "gtools", "HDF5Array", "IRanges", "limma", "locfit", "permute", "R_utils", "Rcpp", "rhdf5", "S4Vectors", "scales", "SummarizedExperiment"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "R_utils", "Rcpp", "S4Vectors", "SummarizedExperiment", "beachmat", "data_table", "gtools", "limma", "locfit", "permute", "rhdf5", "scales"] }, "bugsigdbr": { "name": "bugsigdbr", @@ -7087,25 +7111,25 @@ "name": "bumphunter", "version": "1.46.0", "sha256": "08b5d0grmpk5pryffdh6gdafhp1brana353q2kmwhz7x55aq3w68", - "depends": ["AnnotationDbi", "BiocGenerics", "doRNG", "foreach", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "iterators", "limma", "locfit", "matrixStats", "S4Vectors"] + "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "doRNG", "foreach", "iterators", "limma", "locfit", "matrixStats"] }, "cBioPortalData": { "name": "cBioPortalData", "version": "2.16.0", "sha256": "0s1qy46z78hlk37lnvqh1zi36y90299f6ym82k2d60jbw8aw2jxa", - "depends": ["AnVIL", "BiocFileCache", "digest", "dplyr", "GenomeInfoDb", "GenomicRanges", "httr", "IRanges", "MultiAssayExperiment", "RaggedExperiment", "readr", "RTCGAToolbox", "S4Vectors", "SummarizedExperiment", "TCGAutils", "tibble", "tidyr"] + "depends": ["AnVIL", "BiocFileCache", "GenomeInfoDb", "GenomicRanges", "IRanges", "MultiAssayExperiment", "RTCGAToolbox", "RaggedExperiment", "S4Vectors", "SummarizedExperiment", "TCGAutils", "digest", "dplyr", "httr", "readr", "tibble", "tidyr"] }, "cTRAP": { "name": "cTRAP", "version": "1.22.0", "sha256": "119hnbv0p3mgr3zh9dff9pwllnsk790hm0ahypzpr08gwg2ml9lb", - "depends": ["AnnotationDbi", "AnnotationHub", "binr", "cowplot", "data_table", "dplyr", "DT", "fastmatch", "fgsea", "ggplot2", "ggrepel", "highcharter", "htmltools", "httr", "limma", "pbapply", "purrr", "qs", "R_utils", "readxl", "reshape2", "rhdf5", "rlang", "scales", "shiny", "shinycssloaders", "tibble"] + "depends": ["AnnotationDbi", "AnnotationHub", "DT", "R_utils", "binr", "cowplot", "data_table", "dplyr", "fastmatch", "fgsea", "ggplot2", "ggrepel", "highcharter", "htmltools", "httr", "limma", "pbapply", "purrr", "qs", "readxl", "reshape2", "rhdf5", "rlang", "scales", "shiny", "shinycssloaders", "tibble"] }, "cageminer": { "name": "cageminer", "version": "1.10.0", "sha256": "0ijagv7yzlil4mdibip5css7asdrnzfr2lq3r9zq8fkf4fwr2mpx", - "depends": ["BioNERO", "GenomeInfoDb", "GenomicRanges", "ggbio", "ggplot2", "ggtext", "IRanges", "reshape2", "rlang"] + "depends": ["BioNERO", "GenomeInfoDb", "GenomicRanges", "IRanges", "ggbio", "ggplot2", "ggtext", "reshape2", "rlang"] }, "calm": { "name": "calm", @@ -7117,55 +7141,55 @@ "name": "canceR", "version": "1.38.0", "sha256": "1hmc4sw3w5wsix7ixr85lplpp6hxrd5xpf5apvr77hligw61dhvs", - "depends": ["Biobase", "cBioPortalData", "circlize", "dplyr", "Formula", "geNetClassifier", "GSEABase", "phenoTest", "plyr", "R_methodsS3", "R_oo", "rpart", "RUnit", "survival", "tidyr", "tkrplot"] + "depends": ["Biobase", "Formula", "GSEABase", "RUnit", "R_methodsS3", "R_oo", "cBioPortalData", "circlize", "dplyr", "geNetClassifier", "phenoTest", "plyr", "rpart", "survival", "tidyr", "tkrplot"] }, "cancerclass": { "name": "cancerclass", "version": "1.48.0", "sha256": "00lin7likd0ffqk2nqx5ql8v3zpr82xprv36c1gzw0wkrgp3rgmw", - "depends": ["binom", "Biobase"] + "depends": ["Biobase", "binom"] }, "cardelino": { "name": "cardelino", "version": "1.6.0", "sha256": "16mczwh41gf7ikbzxvggai7a8d64fn2k7q9w1yxf0sn6cwg3l0di", - "depends": ["combinat", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggtree", "Matrix", "matrixStats", "pheatmap", "S4Vectors", "snpStats", "VariantAnnotation", "vcfR"] + "depends": ["GenomeInfoDb", "GenomicRanges", "Matrix", "S4Vectors", "VariantAnnotation", "combinat", "ggplot2", "ggtree", "matrixStats", "pheatmap", "snpStats", "vcfR"] }, "casper": { "name": "casper", "version": "2.38.0", "sha256": "0bwjnncm93j99m38mv99i1pw42cjmib4sqzw5nhb6p9mj39mm3zb", - "depends": ["Biobase", "BiocGenerics", "coda", "EBarrays", "gaga", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "gtools", "IRanges", "limma", "mgcv", "Rsamtools", "rtracklayer", "S4Vectors", "sqldf", "survival", "VGAM"] + "depends": ["Biobase", "BiocGenerics", "EBarrays", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "VGAM", "coda", "gaga", "gtools", "limma", "mgcv", "rtracklayer", "sqldf", "survival"] }, "categoryCompare": { "name": "categoryCompare", "version": "1.48.0", "sha256": "0mfmv3wna7dddf4i3ckh2iin8vq05g4fjb1n2pvw0s9lz3da3rjf", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "Category", "colorspace", "GOstats", "graph", "GSEABase", "hwriter", "RCy3"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "Category", "GOstats", "GSEABase", "RCy3", "annotate", "colorspace", "graph", "hwriter"] }, "cbaf": { "name": "cbaf", "version": "1.26.3", "sha256": "1lpz3n288v32nbb0g4jb1mxmx79amm29m40w3sfkgllnjjdwsyd3", - "depends": ["BiocFileCache", "cBioPortalData", "genefilter", "gplots", "openxlsx", "RColorBrewer"] + "depends": ["BiocFileCache", "RColorBrewer", "cBioPortalData", "genefilter", "gplots", "openxlsx"] }, "cbpManager": { "name": "cbpManager", "version": "1.12.0", "sha256": "1idlxmnbyvc1nzshnvf3p4y9xdjb2kdcm05kpf3ihh993igddk14", - "depends": ["basilisk", "dplyr", "DT", "htmltools", "jsonlite", "magrittr", "markdown", "plyr", "rapportools", "reticulate", "rintrojs", "rlang", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "vroom"] + "depends": ["DT", "basilisk", "dplyr", "htmltools", "jsonlite", "magrittr", "markdown", "plyr", "rapportools", "reticulate", "rintrojs", "rlang", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "vroom"] }, "ccImpute": { "name": "ccImpute", - "version": "1.6.0", - "sha256": "0pjdlh77wpv54m2kc26kyzmpqikgz666dkw5h6af7q7lmgp0xc19", - "depends": ["BiocParallel", "matrixStats", "Rcpp", "RcppEigen", "SIMLR"] + "version": "1.6.1", + "sha256": "043lw1v8kkilki5gq6rjbfbyln39qlld55ch6wnz8qh2yv3k427i", + "depends": ["BiocParallel", "Matrix", "Rcpp", "RcppEigen", "SingleCellExperiment", "SummarizedExperiment", "irlba", "sparseMatrixStats"] }, "ccfindR": { "name": "ccfindR", "version": "1.24.0", "sha256": "1n9dncj7d3ijk6h6fkgmh3a0c6xrfll2fifkl2bz26ndq9i4m1q9", - "depends": ["ape", "gtools", "irlba", "Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "Rdpack", "Rmpi", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "Rdpack", "Rmpi", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ape", "gtools", "irlba"] }, "ccmap": { "name": "ccmap", @@ -7189,25 +7213,25 @@ "name": "celaref", "version": "1.22.0", "sha256": "1l2bf3fhapvpaq30qdrc6nd1chfa4yjish9w9cq7lbhl3xm9b82z", - "depends": ["BiocGenerics", "DelayedArray", "dplyr", "ggplot2", "magrittr", "MAST", "Matrix", "readr", "rlang", "S4Vectors", "SummarizedExperiment", "tibble"] + "depends": ["BiocGenerics", "DelayedArray", "MAST", "Matrix", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "magrittr", "readr", "rlang", "tibble"] }, "celda": { "name": "celda", "version": "1.20.0", "sha256": "0d2vmjgcz5d4nimi3rxk7smbl2ywrgayasjna7kaqvf726ab71qr", - "depends": ["circlize", "ComplexHeatmap", "data_table", "dbscan", "DelayedArray", "digest", "doParallel", "enrichR", "foreach", "ggplot2", "ggrepel", "gridExtra", "gtable", "Matrix", "matrixStats", "MCMCprecision", "plyr", "RColorBrewer", "Rcpp", "RcppEigen", "reshape2", "Rtsne", "S4Vectors", "scales", "scater", "scran", "SingleCellExperiment", "stringr", "SummarizedExperiment", "uwot", "withr"] + "depends": ["ComplexHeatmap", "DelayedArray", "MCMCprecision", "Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "Rtsne", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circlize", "data_table", "dbscan", "digest", "doParallel", "enrichR", "foreach", "ggplot2", "ggrepel", "gridExtra", "gtable", "matrixStats", "plyr", "reshape2", "scales", "scater", "scran", "stringr", "uwot", "withr"] }, "cellHTS2": { "name": "cellHTS2", "version": "2.68.0", "sha256": "0iqsxs84dcr4d1y5pg4799vv3jpf5i1hhq4fhgdp05lanx5qqpsz", - "depends": ["Biobase", "BiocGenerics", "Category", "genefilter", "GSEABase", "hwriter", "locfit", "RColorBrewer", "splots", "vsn"] + "depends": ["Biobase", "BiocGenerics", "Category", "GSEABase", "RColorBrewer", "genefilter", "hwriter", "locfit", "splots", "vsn"] }, "cellbaseR": { "name": "cellbaseR", "version": "1.28.0", "sha256": "1g2y7pgpc500vls62xp817n9arsw8dbj3c0d9dbvb1d014gzmbdw", - "depends": ["BiocParallel", "data_table", "doParallel", "foreach", "httr", "jsonlite", "pbapply", "R_utils", "Rsamtools", "tidyr"] + "depends": ["BiocParallel", "R_utils", "Rsamtools", "data_table", "doParallel", "foreach", "httr", "jsonlite", "pbapply", "tidyr"] }, "cellity": { "name": "cellity", @@ -7219,7 +7243,7 @@ "name": "cellmigRation", "version": "1.12.0", "sha256": "0ahml812f6hm05dxnlsd59bfspxbi4py205kvs0wlijygfqd1ajy", - "depends": ["doParallel", "FactoMineR", "FME", "foreach", "Hmisc", "matrixStats", "reshape2", "sp", "SpatialTools", "tiff", "vioplot"] + "depends": ["FME", "FactoMineR", "Hmisc", "SpatialTools", "doParallel", "foreach", "matrixStats", "reshape2", "sp", "tiff", "vioplot"] }, "cellscape": { "name": "cellscape", @@ -7231,31 +7255,31 @@ "name": "cellxgenedp", "version": "1.8.0", "sha256": "0p3x0sfp4gpp64gwrlr71bgfk84wxf1gg19w1dxgihc8gpaxgb23", - "depends": ["curl", "dplyr", "DT", "httr", "rjsoncons", "shiny"] + "depends": ["DT", "curl", "dplyr", "httr", "rjsoncons", "shiny"] }, "censcyt": { "name": "censcyt", "version": "1.12.0", "sha256": "078s41rvlfwlxr2a651dff5sdbqb507qvicg84k99za6cb4707ry", - "depends": ["BiocParallel", "broom_mixed", "diffcyt", "dirmult", "dplyr", "edgeR", "fitdistrplus", "lme4", "magrittr", "MASS", "mice", "multcomp", "purrr", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "survival", "tibble", "tidyr"] + "depends": ["BiocParallel", "MASS", "S4Vectors", "SummarizedExperiment", "broom_mixed", "diffcyt", "dirmult", "dplyr", "edgeR", "fitdistrplus", "lme4", "magrittr", "mice", "multcomp", "purrr", "rlang", "stringr", "survival", "tibble", "tidyr"] }, "cfDNAPro": { "name": "cfDNAPro", "version": "1.10.0", "sha256": "0nnqfhqq7702zc4hy05wj7rf83vgjqmnpvw90vkg4zrbc7y5fv3w", - "depends": ["BiocGenerics", "BSgenome_Hsapiens_NCBI_GRCh38", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "plyranges", "quantmod", "rlang", "Rsamtools", "stringr", "tibble"] + "depends": ["BSgenome_Hsapiens_NCBI_GRCh38", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "dplyr", "ggplot2", "magrittr", "plyranges", "quantmod", "rlang", "stringr", "tibble"] }, "cfTools": { "name": "cfTools", "version": "1.4.0", "sha256": "0hi9j7a13l18fi2m4w5x8lil1f81izivg8p8hzh3wy8idbsc46m2", - "depends": ["basilisk", "BH", "cfToolsData", "GenomicRanges", "R_utils", "Rcpp"] + "depends": ["BH", "GenomicRanges", "R_utils", "Rcpp", "basilisk", "cfToolsData"] }, "cfdnakit": { "name": "cfdnakit", "version": "1.2.0", "sha256": "1yzhh76r8zlzdg8mpamsr6jvx4j18wkv4dg2mrgclbdmy10dxhwx", - "depends": ["Biobase", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "PSCBS", "QDNAseq", "rlang", "Rsamtools", "S4Vectors"] + "depends": ["Biobase", "GenomeInfoDb", "GenomicRanges", "IRanges", "PSCBS", "QDNAseq", "Rsamtools", "S4Vectors", "dplyr", "ggplot2", "magrittr", "rlang"] }, "cghMCR": { "name": "cghMCR", @@ -7267,25 +7291,25 @@ "name": "chihaya", "version": "1.4.0", "sha256": "10j05n9grh9dzb87hiq06x855c2xhi2c09jryc2ixgxd8jx6g2wy", - "depends": ["DelayedArray", "HDF5Array", "Matrix", "Rcpp", "rhdf5", "Rhdf5lib"] + "depends": ["DelayedArray", "HDF5Array", "Matrix", "Rcpp", "Rhdf5lib", "rhdf5"] }, "chimeraviz": { "name": "chimeraviz", "version": "1.30.0", "sha256": "1nx258g96v7548a742201jf6yhjf537b6pkmcijhawchnzfn38vn", - "depends": ["AnnotationDbi", "AnnotationFilter", "BiocStyle", "Biostrings", "checkmate", "data_table", "dplyr", "DT", "ensembldb", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "graph", "gtools", "Gviz", "IRanges", "magick", "org_Hs_eg_db", "org_Mm_eg_db", "plyr", "RCircos", "RColorBrewer", "Rgraphviz", "rmarkdown", "Rsamtools", "S4Vectors"] + "depends": ["AnnotationDbi", "AnnotationFilter", "BiocStyle", "Biostrings", "DT", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "Gviz", "IRanges", "RCircos", "RColorBrewer", "Rgraphviz", "Rsamtools", "S4Vectors", "checkmate", "data_table", "dplyr", "ensembldb", "graph", "gtools", "magick", "org_Hs_eg_db", "org_Mm_eg_db", "plyr", "rmarkdown"] }, "chipenrich": { "name": "chipenrich", "version": "2.28.0", "sha256": "01sfl3ik12bha3a57gm34y5gnil0akz9f3qfcp9rxsg7zdj8q1mp", - "depends": ["AnnotationDbi", "BiocGenerics", "chipenrich_data", "GenomeInfoDb", "GenomicRanges", "IRanges", "lattice", "latticeExtra", "MASS", "mgcv", "org_Dm_eg_db", "org_Dr_eg_db", "org_Hs_eg_db", "org_Mm_eg_db", "org_Rn_eg_db", "plyr", "rms", "rtracklayer", "S4Vectors", "stringr"] + "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "chipenrich_data", "lattice", "latticeExtra", "mgcv", "org_Dm_eg_db", "org_Dr_eg_db", "org_Hs_eg_db", "org_Mm_eg_db", "org_Rn_eg_db", "plyr", "rms", "rtracklayer", "stringr"] }, "chipseq": { "name": "chipseq", "version": "1.54.0", "sha256": "1rd56knaf0ar8d0nh0mcnrrg5jy0csixig1d4abn1b64vbzrvzpz", - "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "lattice", "S4Vectors", "ShortRead"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "ShortRead", "lattice"] }, "chopsticks": { "name": "chopsticks", @@ -7303,31 +7327,31 @@ "name": "chromPlot", "version": "1.32.0", "sha256": "187w8qm0kf8297yb5yzkd5rxzx6j03hysgpdm41dc247q50nv046", - "depends": ["biomaRt", "GenomicRanges"] + "depends": ["GenomicRanges", "biomaRt"] }, "chromVAR": { "name": "chromVAR", "version": "1.26.0", "sha256": "092y1x1sbqvjrwmr7sv2r5216wbwwc4lk6kwn57fnvvdnc0hc3sv", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "DT", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "Matrix", "miniUI", "nabor", "plotly", "RColorBrewer", "Rcpp", "RcppArmadillo", "Rsamtools", "Rtsne", "S4Vectors", "shiny", "SummarizedExperiment", "TFBSTools"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "DT", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "RColorBrewer", "Rcpp", "RcppArmadillo", "Rsamtools", "Rtsne", "S4Vectors", "SummarizedExperiment", "TFBSTools", "ggplot2", "miniUI", "nabor", "plotly", "shiny"] }, "chromstaR": { "name": "chromstaR", "version": "1.30.0", "sha256": "0swkjq50p3ak0ddyg7pqg37fivdpr3v5jpakn38sk5i5ycn3qf3g", - "depends": ["bamsignals", "BiocGenerics", "chromstaRData", "doParallel", "foreach", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "mvtnorm", "reshape2", "Rsamtools", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "bamsignals", "chromstaRData", "doParallel", "foreach", "ggplot2", "mvtnorm", "reshape2"] }, "cicero": { "name": "cicero", "version": "1.22.0", "sha256": "0x5ly5hkqli5b67hiaa6ha02damyps7vb4l51p0az1j5fxl39n8r", - "depends": ["assertthat", "Biobase", "BiocGenerics", "data_table", "dplyr", "FNN", "GenomicRanges", "ggplot2", "glasso", "Gviz", "igraph", "IRanges", "Matrix", "monocle", "plyr", "reshape2", "S4Vectors", "stringi", "stringr", "tibble", "tidyr", "VGAM"] + "depends": ["Biobase", "BiocGenerics", "FNN", "GenomicRanges", "Gviz", "IRanges", "Matrix", "S4Vectors", "VGAM", "assertthat", "data_table", "dplyr", "ggplot2", "glasso", "igraph", "monocle", "plyr", "reshape2", "stringi", "stringr", "tibble", "tidyr"] }, "circRNAprofiler": { "name": "circRNAprofiler", "version": "1.18.0", "sha256": "0gjnx4645kd7qag7dzs5dp9lhsv6zg5xn6jna3bap4mginl1jvxi", - "depends": ["AnnotationHub", "Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "DESeq2", "dplyr", "edgeR", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gwascat", "IRanges", "magrittr", "R_utils", "readr", "reshape2", "rlang", "rtracklayer", "S4Vectors", "seqinr", "stringi", "stringr", "universalmotif"] + "depends": ["AnnotationHub", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "Biostrings", "DESeq2", "GenomeInfoDb", "GenomicRanges", "IRanges", "R_utils", "S4Vectors", "dplyr", "edgeR", "ggplot2", "gwascat", "magrittr", "readr", "reshape2", "rlang", "rtracklayer", "seqinr", "stringi", "stringr", "universalmotif"] }, "cisPath": { "name": "cisPath", @@ -7339,7 +7363,7 @@ "name": "cleanUpdTSeq", "version": "1.42.0", "sha256": "0fc7lwglp9asssh7yvrqr3wrgdcdapi5zh0fkqmddc1w1n83053r", - "depends": ["Biostrings", "BSgenome", "BSgenome_Drerio_UCSC_danRer7", "e1071", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "seqinr", "stringr"] + "depends": ["BSgenome", "BSgenome_Drerio_UCSC_danRer7", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "e1071", "seqinr", "stringr"] }, "cleaver": { "name": "cleaver", @@ -7351,13 +7375,13 @@ "name": "clevRvis", "version": "1.4.0", "sha256": "08qmhyhd9z5cpgkccz8jbk81ni51xd4rkv18clzwfk85vbkmjywn", - "depends": ["colorspace", "colourpicker", "cowplot", "dplyr", "DT", "ggiraph", "ggnewscale", "ggplot2", "ggraph", "htmlwidgets", "igraph", "magrittr", "patchwork", "purrr", "R_utils", "readr", "readxl", "shiny", "shinycssloaders", "shinydashboard", "shinyhelper", "shinyWidgets", "tibble"] + "depends": ["DT", "R_utils", "colorspace", "colourpicker", "cowplot", "dplyr", "ggiraph", "ggnewscale", "ggplot2", "ggraph", "htmlwidgets", "igraph", "magrittr", "patchwork", "purrr", "readr", "readxl", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyhelper", "tibble"] }, "cliProfiler": { "name": "cliProfiler", "version": "1.10.0", "sha256": "10ikijimbhwijlq19xc8x730ihix19c5z15mq138jj9p85zrqcin", - "depends": ["Biostrings", "BSgenome", "dplyr", "GenomicRanges", "ggplot2", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "Biostrings", "GenomicRanges", "S4Vectors", "dplyr", "ggplot2", "rtracklayer"] }, "clippda": { "name": "clippda", @@ -7369,19 +7393,25 @@ "name": "clipper", "version": "1.44.0", "sha256": "1jaf3xsl37jpwpiq9r3w13fa069jmq6b6j2inmfzdy7jx8vbfm0k", - "depends": ["Biobase", "corpcor", "graph", "gRbase", "igraph", "KEGGgraph", "Matrix", "qpgraph", "Rcpp"] + "depends": ["Biobase", "KEGGgraph", "Matrix", "Rcpp", "corpcor", "gRbase", "graph", "igraph", "qpgraph"] + }, + "cliqueMS": { + "name": "cliqueMS", + "version": "1.18.1", + "sha256": "1k51j9q2s8065sxb04ywdh6kwh1y6w4kslk9iww9vmq0p1dwsdb7", + "depends": ["BH", "MSnbase", "Rcpp", "RcppArmadillo", "coop", "igraph", "matrixStats", "slam", "xcms"] }, "clst": { "name": "clst", "version": "1.52.0", "sha256": "0ng8zmqrnjpavl7mz4sh0qfa3bvxd12vh1568f9brm80avypp02j", - "depends": ["lattice", "ROC"] + "depends": ["ROC", "lattice"] }, "clstutils": { "name": "clstutils", "version": "1.52.0", "sha256": "0ry1b3gq2mbdir84pipk8z0dkf0g1mph9yflx3snjdc4izgviasx", - "depends": ["ape", "clst", "lattice", "rjson", "RSQLite"] + "depends": ["RSQLite", "ape", "clst", "lattice", "rjson"] }, "clustComp": { "name": "clustComp", @@ -7393,19 +7423,19 @@ "name": "clusterExperiment", "version": "2.24.0", "sha256": "0pi6qnchh89fhfr50fk4hrrkz1r8gfwjcd7254pgiaxcazv2380a", - "depends": ["ape", "BiocGenerics", "BiocSingular", "cluster", "DelayedArray", "edgeR", "HDF5Array", "kernlab", "limma", "locfdr", "Matrix", "matrixStats", "mbkmeans", "NMF", "phylobase", "pracma", "RColorBrewer", "Rcpp", "S4Vectors", "scales", "SingleCellExperiment", "stringr", "SummarizedExperiment", "zinbwave"] + "depends": ["BiocGenerics", "BiocSingular", "DelayedArray", "HDF5Array", "Matrix", "NMF", "RColorBrewer", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ape", "cluster", "edgeR", "kernlab", "limma", "locfdr", "matrixStats", "mbkmeans", "phylobase", "pracma", "scales", "stringr", "zinbwave"] }, "clusterProfiler": { "name": "clusterProfiler", - "version": "4.12.0", - "sha256": "0wmfbr4n8a1mg8g3gl9gnqrvq5p6cfay2858fqx7wxpr2q8yynhz", - "depends": ["AnnotationDbi", "DOSE", "downloader", "dplyr", "enrichplot", "GO_db", "GOSemSim", "gson", "httr", "igraph", "magrittr", "plyr", "qvalue", "rlang", "tidyr", "yulab_utils"] + "version": "4.12.3", + "sha256": "1lcgbhrs32cdkph11p3xrhy5ic5d52zfajddvynqnzc9zhxmbgcf", + "depends": ["AnnotationDbi", "DOSE", "GOSemSim", "GO_db", "downloader", "dplyr", "enrichplot", "gson", "httr", "igraph", "magrittr", "plyr", "qvalue", "rlang", "tidyr", "yulab_utils"] }, "clusterSeq": { "name": "clusterSeq", "version": "1.28.0", "sha256": "0spf8kv15dchr852apzmwpq27a7gflxvah0yrdyaq7kgqv3107l9", - "depends": ["baySeq", "BiocGenerics", "BiocParallel"] + "depends": ["BiocGenerics", "BiocParallel", "baySeq"] }, "clusterStab": { "name": "clusterStab", @@ -7417,19 +7447,19 @@ "name": "clustifyr", "version": "1.16.0", "sha256": "14c7jr4q0zij2zqpcm6jihy0ch80yfp67lvhxiakcg33xq1jvmzv", - "depends": ["cowplot", "dplyr", "entropy", "fgsea", "ggplot2", "httr", "Matrix", "matrixStats", "proxy", "rlang", "S4Vectors", "scales", "SeuratObject", "SingleCellExperiment", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["Matrix", "S4Vectors", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "cowplot", "dplyr", "entropy", "fgsea", "ggplot2", "httr", "matrixStats", "proxy", "rlang", "scales", "stringr", "tibble", "tidyr"] }, "cmapR": { "name": "cmapR", "version": "1.16.0", "sha256": "0gj0s6l7r5dln7h9z5y03bjxj3w73cy4x83ik1cp5nmffabypzm9", - "depends": ["data_table", "flowCore", "matrixStats", "rhdf5", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "data_table", "flowCore", "matrixStats", "rhdf5"] }, "cn_farms": { "name": "cn.farms", "version": "1.52.0", "sha256": "098p6bhibg14ahx2gn2jbqaf537w00428a8mqvzghy9519pwmsqd", - "depends": ["affxparser", "Biobase", "DBI", "DNAcopy", "ff", "lattice", "oligo", "oligoClasses", "preprocessCore", "snow"] + "depends": ["Biobase", "DBI", "DNAcopy", "affxparser", "ff", "lattice", "oligo", "oligoClasses", "preprocessCore", "snow"] }, "cn_mops": { "name": "cn.mops", @@ -7441,7 +7471,7 @@ "name": "cnvGSA", "version": "1.48.0", "sha256": "1njb31i1fsvisgjjczjbc9qb7w6bz8dh4856gghkb4f9gscn06rk", - "depends": ["brglm", "doParallel", "foreach", "GenomicRanges", "splitstackshape"] + "depends": ["GenomicRanges", "brglm", "doParallel", "foreach", "splitstackshape"] }, "coGPS": { "name": "coGPS", @@ -7453,7 +7483,7 @@ "name": "coMethDMR", "version": "1.8.0", "sha256": "1a0f0r11jdcf47b9nzswi9j1axhibij09lava57cv48a23hzrj6z", - "depends": ["AnnotationHub", "BiocParallel", "bumphunter", "ExperimentHub", "GenomicRanges", "IRanges", "lmerTest"] + "depends": ["AnnotationHub", "BiocParallel", "ExperimentHub", "GenomicRanges", "IRanges", "bumphunter", "lmerTest"] }, "coRdon": { "name": "coRdon", @@ -7465,13 +7495,13 @@ "name": "codelink", "version": "1.72.0", "sha256": "0maag5ns0j2c7l4pnrgb724108fmp4a2xj8nffk1kw4ag39k9xqc", - "depends": ["annotate", "Biobase", "BiocGenerics", "limma"] + "depends": ["Biobase", "BiocGenerics", "annotate", "limma"] }, "cogena": { "name": "cogena", "version": "1.38.0", "sha256": "0w41i4mvv085pvm0ars31qy0m6alb96kni3k6lcsikqch9nqiv3z", - "depends": ["amap", "apcluster", "Biobase", "biwt", "class", "cluster", "corrplot", "devtools", "doParallel", "dplyr", "fastcluster", "foreach", "ggplot2", "gplots", "kohonen", "mclust", "reshape2", "stringr", "tibble", "tidyr"] + "depends": ["Biobase", "amap", "apcluster", "biwt", "class", "cluster", "corrplot", "devtools", "doParallel", "dplyr", "fastcluster", "foreach", "ggplot2", "gplots", "kohonen", "mclust", "reshape2", "stringr", "tibble", "tidyr"] }, "cogeqc": { "name": "cogeqc", @@ -7483,25 +7513,25 @@ "name": "cola", "version": "2.10.0", "sha256": "014yx4r5as34f6g1xf4amqwkq0xqa66rv8g45r4cd4fp4dv9szzg", - "depends": ["BiocGenerics", "brew", "circlize", "clue", "cluster", "ComplexHeatmap", "crayon", "digest", "doParallel", "doRNG", "eulerr", "foreach", "GetoptLong", "GlobalOptions", "httr", "impute", "irlba", "knitr", "markdown", "matrixStats", "mclust", "microbenchmark", "png", "RColorBrewer", "Rcpp", "skmeans", "xml2"] + "depends": ["BiocGenerics", "ComplexHeatmap", "GetoptLong", "GlobalOptions", "RColorBrewer", "Rcpp", "brew", "circlize", "clue", "cluster", "crayon", "digest", "doParallel", "doRNG", "eulerr", "foreach", "httr", "impute", "irlba", "knitr", "markdown", "matrixStats", "mclust", "microbenchmark", "png", "skmeans", "xml2"] }, "comapr": { "name": "comapr", "version": "1.8.0", "sha256": "007r7q7p97w5rh8pvgrajlyv09m6h9q8zs0mb8xs1qw3jlkac5z4", - "depends": ["BiocParallel", "circlize", "dplyr", "foreach", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "Gviz", "IRanges", "Matrix", "plotly", "plyr", "RColorBrewer", "reshape2", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "tidyr"] + "depends": ["BiocParallel", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "Matrix", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "circlize", "dplyr", "foreach", "ggplot2", "gridExtra", "plotly", "plyr", "reshape2", "rlang", "scales", "tidyr"] }, "combi": { "name": "combi", "version": "1.16.0", "sha256": "1s6nxigvmxq5c2y347k87by0krda63lwynvbgagvg9h2lhb588kv", - "depends": ["alabama", "BB", "Biobase", "cobs", "DBI", "ggplot2", "limma", "Matrix", "nleqslv", "phyloseq", "reshape2", "SummarizedExperiment", "tensor", "vegan"] + "depends": ["BB", "Biobase", "DBI", "Matrix", "SummarizedExperiment", "alabama", "cobs", "ggplot2", "limma", "nleqslv", "phyloseq", "reshape2", "tensor", "vegan"] }, "compEpiTools": { "name": "compEpiTools", "version": "1.38.0", "sha256": "04yhfihszw5s61195435cczk801rb8n29zrh8rqknf0rdyccxb2q", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GO_db", "gplots", "IRanges", "methylPipe", "Rsamtools", "S4Vectors", "topGO", "XVector"] + "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "GO_db", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "XVector", "gplots", "methylPipe", "topGO"] }, "compSPOT": { "name": "compSPOT", @@ -7513,55 +7543,55 @@ "name": "compcodeR", "version": "1.40.0", "sha256": "0szixwgk85qpyag2i8spn0shpl8r6j5xjg90js3rgrx1b8saaqbm", - "depends": ["ape", "caTools", "edgeR", "ggplot2", "gplots", "gtools", "KernSmooth", "knitr", "lattice", "limma", "markdown", "MASS", "matrixStats", "modeest", "phylolm", "rmarkdown", "ROCR", "shiny", "shinydashboard", "sm", "stringr", "vioplot"] + "depends": ["KernSmooth", "MASS", "ROCR", "ape", "caTools", "edgeR", "ggplot2", "gplots", "gtools", "knitr", "lattice", "limma", "markdown", "matrixStats", "modeest", "phylolm", "rmarkdown", "shiny", "shinydashboard", "sm", "stringr", "vioplot"] }, "concordexR": { "name": "concordexR", "version": "1.4.0", "sha256": "0z8h4gr8lj6kpffi1zha4683ha46n5nrlc3yvyrwbf2gflzvdf3y", - "depends": ["BiocParallel", "cli", "DelayedArray", "ggplot2", "Matrix", "pheatmap", "rlang", "scales"] + "depends": ["BiocParallel", "DelayedArray", "Matrix", "cli", "ggplot2", "pheatmap", "rlang", "scales"] }, "condiments": { "name": "condiments", "version": "1.12.0", "sha256": "0wifi5npnzmwdvh6g2xa998ccl902jka1mfs4xxgrpdbc0rxny8r", - "depends": ["BiocParallel", "distinct", "dplyr", "Ecume", "igraph", "magrittr", "matrixStats", "mgcv", "pbapply", "RANN", "SingleCellExperiment", "slingshot", "SummarizedExperiment", "TrajectoryUtils"] + "depends": ["BiocParallel", "Ecume", "RANN", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils", "distinct", "dplyr", "igraph", "magrittr", "matrixStats", "mgcv", "pbapply", "slingshot"] }, "consICA": { "name": "consICA", "version": "2.2.0", "sha256": "061v9v4gpxxmb5yn6dhh1r2x52y3ik68v1y59sfaazhlp3kg970x", - "depends": ["BiocParallel", "fastICA", "ggplot2", "GO_db", "graph", "org_Hs_eg_db", "pheatmap", "Rfast", "sm", "SummarizedExperiment", "survival", "topGO"] + "depends": ["BiocParallel", "GO_db", "Rfast", "SummarizedExperiment", "fastICA", "ggplot2", "graph", "org_Hs_eg_db", "pheatmap", "sm", "survival", "topGO"] }, "consensus": { "name": "consensus", "version": "1.22.0", "sha256": "09g6qmvalbnyskvv6zb49h3ph4xv3rz71y6gdfayh5jmh82nw9fd", - "depends": ["gplots", "matrixStats", "RColorBrewer"] + "depends": ["RColorBrewer", "gplots", "matrixStats"] }, "consensusDE": { "name": "consensusDE", "version": "1.22.0", "sha256": "051rcanakn1kmlybhc57cp80rxdgvpd0grldsw014ss8s938nz8z", - "depends": ["airway", "AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "data_table", "dendextend", "DESeq2", "EDASeq", "edgeR", "EnsDb_Hsapiens_v86", "ensembldb", "GenomicAlignments", "GenomicFeatures", "limma", "org_Hs_eg_db", "pcaMethods", "RColorBrewer", "Rsamtools", "RUVSeq", "S4Vectors", "SummarizedExperiment", "TxDb_Dmelanogaster_UCSC_dm3_ensGene"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DESeq2", "EDASeq", "EnsDb_Hsapiens_v86", "GenomicAlignments", "GenomicFeatures", "RColorBrewer", "RUVSeq", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TxDb_Dmelanogaster_UCSC_dm3_ensGene", "airway", "data_table", "dendextend", "edgeR", "ensembldb", "limma", "org_Hs_eg_db", "pcaMethods"] }, "consensusOV": { "name": "consensusOV", "version": "1.26.0", "sha256": "0a2qrjid6a5yndkhd47km40qv2c3321xypr5mwlwsq5qp48x7vvq", - "depends": ["Biobase", "BiocParallel", "gdata", "genefu", "GSVA", "limma", "matrixStats", "randomForest"] + "depends": ["Biobase", "BiocParallel", "GSVA", "gdata", "genefu", "limma", "matrixStats", "randomForest"] }, "consensusSeekeR": { "name": "consensusSeekeR", "version": "1.32.0", "sha256": "0da6k6i372iqh1gnd4g6ifg75hkx2rrlp2bpwf1ai3g31n8ashiw", - "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "stringr"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "rtracklayer", "stringr"] }, "conumee": { "name": "conumee", "version": "1.38.0", "sha256": "0ys8z4xgnmbg4dq81mr59imbz3p9j5ymi9y1dk030xrdh5iwi0am", - "depends": ["DNAcopy", "GenomeInfoDb", "GenomicRanges", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "IlluminaHumanMethylationEPICanno_ilm10b2_hg19", "IlluminaHumanMethylationEPICmanifest", "IRanges", "minfi", "rtracklayer"] + "depends": ["DNAcopy", "GenomeInfoDb", "GenomicRanges", "IRanges", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "IlluminaHumanMethylationEPICanno_ilm10b2_hg19", "IlluminaHumanMethylationEPICmanifest", "minfi", "rtracklayer"] }, "convert": { "name": "convert", @@ -7579,49 +7609,49 @@ "name": "corral", "version": "1.14.0", "sha256": "14zf8ya8yrr2bbxg8iiwxn3l7qvii0bmiwwdmypgv1qi32hx9ckp", - "depends": ["ggplot2", "ggthemes", "gridExtra", "irlba", "Matrix", "MultiAssayExperiment", "pals", "reshape2", "SingleCellExperiment", "SummarizedExperiment", "transport"] + "depends": ["Matrix", "MultiAssayExperiment", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "ggthemes", "gridExtra", "irlba", "pals", "reshape2", "transport"] }, "coseq": { "name": "coseq", "version": "1.28.0", "sha256": "0g24q3wb15qnj3igbj93k0rlw1s6ylgzhi8106qfmpybnq3rcry5", - "depends": ["BiocParallel", "capushe", "compositions", "corrplot", "DESeq2", "e1071", "edgeR", "ggplot2", "HTSCluster", "HTSFilter", "mvtnorm", "Rmixmod", "S4Vectors", "scales", "SummarizedExperiment"] + "depends": ["BiocParallel", "DESeq2", "HTSCluster", "HTSFilter", "Rmixmod", "S4Vectors", "SummarizedExperiment", "capushe", "compositions", "corrplot", "e1071", "edgeR", "ggplot2", "mvtnorm", "scales"] }, "cosmiq": { "name": "cosmiq", "version": "1.38.0", "sha256": "0rvayjwg9f3ns8mv657sww9azjjbavxfxcshazn48j7rvr4bqx8z", - "depends": ["faahKO", "MassSpecWavelet", "pracma", "Rcpp", "xcms"] + "depends": ["MassSpecWavelet", "Rcpp", "faahKO", "pracma", "xcms"] }, "cosmosR": { "name": "cosmosR", "version": "1.12.0", "sha256": "0rpy6dysf5p892dcad4z45i607km23pah4iq448g5mbzypsjkqsw", - "depends": ["CARNIVAL", "decoupleR", "dorothea", "dplyr", "GSEABase", "igraph", "progress", "purrr", "rlang", "stringr", "visNetwork"] + "depends": ["CARNIVAL", "GSEABase", "decoupleR", "dorothea", "dplyr", "igraph", "progress", "purrr", "rlang", "stringr", "visNetwork"] }, "countsimQC": { "name": "countsimQC", "version": "1.22.0", "sha256": "0zrxi7zvdiv1xx3hiy15a3wjgqvywikixx8lq3qx85dw2kz3nfpf", - "depends": ["caTools", "DESeq2", "dplyr", "DT", "edgeR", "genefilter", "GenomeInfoDbData", "ggplot2", "ragg", "randtests", "rmarkdown", "SummarizedExperiment", "tidyr"] + "depends": ["DESeq2", "DT", "GenomeInfoDbData", "SummarizedExperiment", "caTools", "dplyr", "edgeR", "genefilter", "ggplot2", "ragg", "randtests", "rmarkdown", "tidyr"] }, "covEB": { "name": "covEB", "version": "1.30.0", "sha256": "15yz54dhjwz6iafmvq33l43z3w887a6b7i150rqi23rzs9mabixa", - "depends": ["Biobase", "gsl", "igraph", "LaplacesDemon", "Matrix", "mvtnorm"] + "depends": ["Biobase", "LaplacesDemon", "Matrix", "gsl", "igraph", "mvtnorm"] }, "covRNA": { "name": "covRNA", "version": "1.30.0", "sha256": "12j69j73fkfn3s20jcyixp71a5j37m405962mxa2pihlqsrh7sxl", - "depends": ["ade4", "Biobase", "genefilter"] + "depends": ["Biobase", "ade4", "genefilter"] }, "cpvSNP": { "name": "cpvSNP", "version": "1.36.0", "sha256": "0kn65jzx9cif1w3hqyfjkxdcpnlk9b8msv3rk0ahdsln1d0mnyw6", - "depends": ["BiocParallel", "corpcor", "GenomicFeatures", "ggplot2", "GSEABase", "plyr"] + "depends": ["BiocParallel", "GSEABase", "GenomicFeatures", "corpcor", "ggplot2", "plyr"] }, "cqn": { "name": "cqn", @@ -7639,31 +7669,31 @@ "name": "crisprBowtie", "version": "1.8.0", "sha256": "0fyihnmrl92nl1r85axz9bck6l9clvc5a6px0214i064w8dn1njj", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "crisprBase", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rbowtie", "readr", "stringr"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rbowtie", "crisprBase", "readr", "stringr"] }, "crisprBwa": { "name": "crisprBwa", "version": "1.8.0", "sha256": "1vz99b632fzxdlpw5n2z2mbx7sb9hng58np1ra7gqc2wypk0sa8x", - "depends": ["BiocGenerics", "BSgenome", "crisprBase", "GenomeInfoDb", "Rbwa", "readr", "stringr"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "Rbwa", "crisprBase", "readr", "stringr"] }, "crisprDesign": { "name": "crisprDesign", "version": "1.6.0", "sha256": "1zv8cc52r13b47r44qph892fhbgy1xp8xz4xf1hfyqgd7ywcl9kb", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "BSgenome", "crisprBase", "crisprBowtie", "crisprScore", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "rtracklayer", "S4Vectors", "txdbmaker", "VariantAnnotation"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "S4Vectors", "VariantAnnotation", "crisprBase", "crisprBowtie", "crisprScore", "rtracklayer", "txdbmaker"] }, "crisprScore": { "name": "crisprScore", "version": "1.8.0", "sha256": "1czg5l4bvi5j3afip74qgl1kqgcllb5s1gz6sy7qk1cbf1fmvril", - "depends": ["basilisk", "basilisk_utils", "BiocGenerics", "Biostrings", "crisprScoreData", "IRanges", "randomForest", "reticulate", "stringr", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "IRanges", "XVector", "basilisk", "basilisk_utils", "crisprScoreData", "randomForest", "reticulate", "stringr"] }, "crisprShiny": { "name": "crisprShiny", "version": "1.0.0", "sha256": "0fmp0gi70cv3g4c00l6g58kww9cg9rvpkhg8lsii9j8p8fj6hsjd", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "crisprBase", "crisprDesign", "crisprScore", "crisprViz", "DT", "GenomeInfoDb", "htmlwidgets", "pwalign", "S4Vectors", "shiny", "shinyBS", "shinyjs", "waiter"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "DT", "GenomeInfoDb", "S4Vectors", "crisprBase", "crisprDesign", "crisprScore", "crisprViz", "htmlwidgets", "pwalign", "shiny", "shinyBS", "shinyjs", "waiter"] }, "crisprVerse": { "name": "crisprVerse", @@ -7675,31 +7705,31 @@ "name": "crisprViz", "version": "1.6.0", "sha256": "1bbawsmah9h12kxwcq97q1mjbkniivfafm95k299bb93baqillih", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "crisprBase", "crisprDesign", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "txdbmaker"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "S4Vectors", "crisprBase", "crisprDesign", "txdbmaker"] }, "crlmm": { "name": "crlmm", "version": "1.62.0", "sha256": "0b0zwawxm07iy5g9z17057dsifrwyyl5rkgn09k7vh8rkfxbdydx", - "depends": ["affyio", "beanplot", "Biobase", "BiocGenerics", "ellipse", "ff", "foreach", "illuminaio", "lattice", "limma", "matrixStats", "mvtnorm", "oligoClasses", "preprocessCore", "RcppEigen", "VGAM"] + "depends": ["Biobase", "BiocGenerics", "RcppEigen", "VGAM", "affyio", "beanplot", "ellipse", "ff", "foreach", "illuminaio", "lattice", "limma", "matrixStats", "mvtnorm", "oligoClasses", "preprocessCore"] }, "crossmeta": { "name": "crossmeta", "version": "1.30.0", "sha256": "1ghgfby1rl3phldyipli550f0i289yanb0v4nzn5l1xnpkxaj6fa", - "depends": ["affxparser", "affy", "AnnotationDbi", "Biobase", "BiocGenerics", "BiocManager", "data_table", "DBI", "DT", "edgeR", "fdrtool", "GEOquery", "limma", "matrixStats", "metaMA", "miniUI", "oligo", "RCurl", "reader", "readxl", "RSQLite", "shiny", "shinyBS", "shinyjs", "shinypanel", "shinyWidgets", "stringr", "sva", "tibble", "XML"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocManager", "DBI", "DT", "GEOquery", "RCurl", "RSQLite", "XML", "affxparser", "affy", "data_table", "edgeR", "fdrtool", "limma", "matrixStats", "metaMA", "miniUI", "oligo", "reader", "readxl", "shiny", "shinyBS", "shinyWidgets", "shinyjs", "shinypanel", "stringr", "sva", "tibble"] }, "csaw": { "name": "csaw", "version": "1.38.0", "sha256": "0a870z480an3wwbp6z4qy034kvk6bvrydgk2if7x4q9k3qvknsz0", - "depends": ["BiocGenerics", "BiocParallel", "edgeR", "GenomeInfoDb", "GenomicRanges", "IRanges", "limma", "Matrix", "metapod", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "zlibbioc"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "edgeR", "limma", "metapod", "zlibbioc"] }, "csdR": { "name": "csdR", "version": "1.10.0", "sha256": "13g6rq95888l4ach0yrw6nrfvyxnw3b5ni01v875gfk5jl9jcllv", - "depends": ["glue", "matrixStats", "Rcpp", "RhpcBLASctl", "WGCNA"] + "depends": ["Rcpp", "RhpcBLASctl", "WGCNA", "glue", "matrixStats"] }, "ctc": { "name": "ctc", @@ -7717,25 +7747,25 @@ "name": "cummeRbund", "version": "2.46.0", "sha256": "0hdm2214waz02ybr264xis48kj2anpad80jk640p49v9r17iia9l", - "depends": ["Biobase", "BiocGenerics", "fastcluster", "ggplot2", "Gviz", "plyr", "reshape2", "RSQLite", "rtracklayer", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "Gviz", "RSQLite", "S4Vectors", "fastcluster", "ggplot2", "plyr", "reshape2", "rtracklayer"] }, "customCMPdb": { "name": "customCMPdb", "version": "1.14.0", "sha256": "1j56542mp1gimnbbakbilkmb59jngvx8w47ycnaj8c1j1yhar9ll", - "depends": ["AnnotationHub", "BiocFileCache", "ChemmineR", "rappdirs", "RSQLite", "XML"] + "depends": ["AnnotationHub", "BiocFileCache", "ChemmineR", "RSQLite", "XML", "rappdirs"] }, "customProDB": { "name": "customProDB", "version": "1.44.0", "sha256": "1pxn9nq84h9xgn2g0jzigbw7pbv4sjvf4jkzalp7l3yjax5llq3i", - "depends": ["AhoCorasickTrie", "AnnotationDbi", "biomaRt", "Biostrings", "DBI", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "plyr", "RCurl", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "stringr", "txdbmaker", "VariantAnnotation"] + "depends": ["AhoCorasickTrie", "AnnotationDbi", "Biostrings", "DBI", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RCurl", "RSQLite", "Rsamtools", "S4Vectors", "VariantAnnotation", "biomaRt", "plyr", "rtracklayer", "stringr", "txdbmaker"] }, "cyanoFilter": { "name": "cyanoFilter", "version": "1.12.0", "sha256": "1nymq5qiw5s2nfa67mccv0jn6gxy5y6sx483cw87j5pbmvg579rx", - "depends": ["Biobase", "cytometree", "flowClust", "flowCore", "flowDensity", "GGally", "ggplot2", "mrfDepth"] + "depends": ["Biobase", "GGally", "cytometree", "flowClust", "flowCore", "flowDensity", "ggplot2", "mrfDepth"] }, "cycle": { "name": "cycle", @@ -7747,19 +7777,19 @@ "name": "cydar", "version": "1.28.0", "sha256": "16lr3sry647wns2ycv3b604fmsma3a944g85c4ik7xk7ij1ady47", - "depends": ["Biobase", "BiocGenerics", "BiocNeighbors", "BiocParallel", "flowCore", "Rcpp", "S4Vectors", "shiny", "SingleCellExperiment", "SummarizedExperiment", "viridis"] + "depends": ["Biobase", "BiocGenerics", "BiocNeighbors", "BiocParallel", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "flowCore", "shiny", "viridis"] }, "cypress": { "name": "cypress", "version": "1.0.0", "sha256": "0dyywkg41ihff6f2f6p7854qkgx3lav1rviicrik2nlxg4scl034", - "depends": ["abind", "BiocParallel", "checkmate", "DESeq2", "dplyr", "e1071", "edgeR", "MASS", "mvtnorm", "preprocessCore", "PROPER", "RColorBrewer", "rlang", "sirt", "SummarizedExperiment", "TCA", "tibble", "TOAST"] + "depends": ["BiocParallel", "DESeq2", "MASS", "PROPER", "RColorBrewer", "SummarizedExperiment", "TCA", "TOAST", "abind", "checkmate", "dplyr", "e1071", "edgeR", "mvtnorm", "preprocessCore", "rlang", "sirt", "tibble"] }, "cytoKernel": { "name": "cytoKernel", "version": "1.10.0", "sha256": "0pzcsxshc60myzhq57gxyzrfd590ggydj2nq0byca7vyzxc6z3y6", - "depends": ["ashr", "BiocParallel", "circlize", "ComplexHeatmap", "data_table", "dplyr", "magrittr", "Rcpp", "rlang", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocParallel", "ComplexHeatmap", "Rcpp", "S4Vectors", "SummarizedExperiment", "ashr", "circlize", "data_table", "dplyr", "magrittr", "rlang"] }, "cytoMEM": { "name": "cytoMEM", @@ -7771,31 +7801,31 @@ "name": "cytofQC", "version": "1.4.0", "sha256": "1gn383vchgxs62z9p5h7b0wnakwmwclsk46px6ah1cagykrfgas3", - "depends": ["CATALYST", "e1071", "EZtune", "flowCore", "gbm", "ggplot2", "hrbrthemes", "matrixStats", "randomForest", "rmarkdown", "S4Vectors", "SingleCellExperiment", "ssc", "SummarizedExperiment"] + "depends": ["CATALYST", "EZtune", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "e1071", "flowCore", "gbm", "ggplot2", "hrbrthemes", "matrixStats", "randomForest", "rmarkdown", "ssc"] }, "cytolib": { "name": "cytolib", "version": "2.16.0", "sha256": "0nrj892jihi4fv58si3il42s0vyz3gm4gmb65kidkky63gmsy6iq", - "depends": ["BH", "Rhdf5lib", "RProtoBufLib"] + "depends": ["BH", "RProtoBufLib", "Rhdf5lib"] }, "cytomapper": { "name": "cytomapper", "version": "1.16.0", "sha256": "1njdhhnzy639v4w07wvgj2gygsipzkfzhbrw63fvxfpf4r1xjzix", - "depends": ["BiocParallel", "DelayedArray", "EBImage", "ggbeeswarm", "ggplot2", "HDF5Array", "matrixStats", "nnls", "raster", "RColorBrewer", "rhdf5", "S4Vectors", "shiny", "shinydashboard", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "svglite", "svgPanZoom", "viridis"] + "depends": ["BiocParallel", "DelayedArray", "EBImage", "HDF5Array", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "ggbeeswarm", "ggplot2", "matrixStats", "nnls", "raster", "rhdf5", "shiny", "shinydashboard", "svgPanZoom", "svglite", "viridis"] }, "cytoviewer": { "name": "cytoviewer", "version": "1.4.0", "sha256": "0s7jnr3z7p6v6x17a9a6cv9vbqgfk8snamcw8qkjpfd613gwk43r", - "depends": ["archive", "colourpicker", "cytomapper", "EBImage", "RColorBrewer", "S4Vectors", "shiny", "shinycssloaders", "shinydashboard", "SingleCellExperiment", "SummarizedExperiment", "svglite", "svgPanZoom", "viridis"] + "depends": ["EBImage", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "archive", "colourpicker", "cytomapper", "shiny", "shinycssloaders", "shinydashboard", "svgPanZoom", "svglite", "viridis"] }, "dStruct": { "name": "dStruct", "version": "1.10.0", "sha256": "144hyris6fsbs28pz4643njnpjfb0n9w6pm220q5hid4zvhn7dh7", - "depends": ["ggplot2", "IRanges", "purrr", "reshape2", "rlang", "S4Vectors", "zoo"] + "depends": ["IRanges", "S4Vectors", "ggplot2", "purrr", "reshape2", "rlang", "zoo"] }, "daMA": { "name": "daMA", @@ -7807,19 +7837,19 @@ "name": "dada2", "version": "1.32.0", "sha256": "1ac0nb5bcmzmqpi3vjdmns6xqq3ar61dks6qb3c0k48c78w88b7b", - "depends": ["BiocGenerics", "Biostrings", "ggplot2", "IRanges", "Rcpp", "RcppParallel", "reshape2", "ShortRead", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "IRanges", "Rcpp", "RcppParallel", "ShortRead", "XVector", "ggplot2", "reshape2"] }, "dagLogo": { "name": "dagLogo", "version": "1.42.0", "sha256": "1qaa63ymsirwdvy9z82c81kknhqcpip7bry4b9d8xan48m5f63xl", - "depends": ["BiocGenerics", "biomaRt", "Biostrings", "httr", "motifStack", "pheatmap", "UniProt_ws"] + "depends": ["BiocGenerics", "Biostrings", "UniProt_ws", "biomaRt", "httr", "motifStack", "pheatmap"] }, "dar": { "name": "dar", "version": "1.0.0", "sha256": "0l5hjx86n34k3b4cdlndl5gh62f3jxps1iq2ir3fzacpxqsimkjw", - "depends": ["cli", "ComplexHeatmap", "crayon", "dplyr", "generics", "ggplot2", "glue", "gplots", "heatmaply", "magrittr", "mia", "phyloseq", "purrr", "readr", "rlang", "scales", "stringr", "tibble", "tidyr", "UpSetR", "waldo"] + "depends": ["ComplexHeatmap", "UpSetR", "cli", "crayon", "dplyr", "generics", "ggplot2", "glue", "gplots", "heatmaply", "magrittr", "mia", "phyloseq", "purrr", "readr", "rlang", "scales", "stringr", "tibble", "tidyr", "waldo"] }, "dcGSA": { "name": "dcGSA", @@ -7831,55 +7861,55 @@ "name": "dcanr", "version": "1.20.0", "sha256": "15way811xnlhb3qafvfibvqsvx72h8hr0jbwxvqd2dzc2gmkq2ib", - "depends": ["circlize", "doRNG", "foreach", "igraph", "Matrix", "plyr", "RColorBrewer", "reshape2", "stringr"] + "depends": ["Matrix", "RColorBrewer", "circlize", "doRNG", "foreach", "igraph", "plyr", "reshape2", "stringr"] }, "dce": { "name": "dce", "version": "1.12.0", "sha256": "1fxcbf21i8k5zydv4qqm41pm3lawkc66ic2rxhlgiwlh7c49awam", - "depends": ["assertthat", "dplyr", "edgeR", "epiNEM", "expm", "ggplot2", "ggraph", "glm2", "glue", "graph", "graphite", "harmonicmeanp", "igraph", "logger", "magrittr", "MASS", "Matrix", "metap", "mnem", "naturalsort", "org_Hs_eg_db", "pcalg", "ppcor", "purrr", "reshape2", "Rgraphviz", "rlang", "shadowtext", "tidygraph", "tidyverse"] + "depends": ["MASS", "Matrix", "Rgraphviz", "assertthat", "dplyr", "edgeR", "epiNEM", "expm", "ggplot2", "ggraph", "glm2", "glue", "graph", "graphite", "harmonicmeanp", "igraph", "logger", "magrittr", "metap", "mnem", "naturalsort", "org_Hs_eg_db", "pcalg", "ppcor", "purrr", "reshape2", "rlang", "shadowtext", "tidygraph", "tidyverse"] }, "ddCt": { "name": "ddCt", "version": "1.60.0", "sha256": "1q2j80wn5x0lkhpd0krsnw99rrn3kqn09d8xdi778cmvsgqxpahg", - "depends": ["Biobase", "BiocGenerics", "lattice", "RColorBrewer", "xtable"] + "depends": ["Biobase", "BiocGenerics", "RColorBrewer", "lattice", "xtable"] }, "ddPCRclust": { "name": "ddPCRclust", "version": "1.24.0", "sha256": "0nmnhykwzbyf2y9i3fi5hgwvc7m7bcikyr3c3nxyaw95f8cc52dp", - "depends": ["clue", "flowCore", "flowDensity", "flowPeaks", "ggplot2", "openxlsx", "plotrix", "R_utils", "SamSPECTRAL"] + "depends": ["R_utils", "SamSPECTRAL", "clue", "flowCore", "flowDensity", "flowPeaks", "ggplot2", "openxlsx", "plotrix"] }, "dearseq": { "name": "dearseq", "version": "1.16.0", "sha256": "0hy8cnqyvp2mrhj5wi1shh1cba79c5z8f17mfw764s2d6ivsfzz6", - "depends": ["CompQuadForm", "dplyr", "ggplot2", "KernSmooth", "magrittr", "matrixStats", "patchwork", "pbapply", "reshape2", "rlang", "scattermore", "statmod", "survey", "tibble", "viridisLite"] + "depends": ["CompQuadForm", "KernSmooth", "dplyr", "ggplot2", "magrittr", "matrixStats", "patchwork", "pbapply", "reshape2", "rlang", "scattermore", "statmod", "survey", "tibble", "viridisLite"] }, "debCAM": { "name": "debCAM", "version": "1.22.0", "sha256": "1lbgwv7009fpwqw6kl94gmm44xypn60r8kcm3fjzgbjbwijriwgq", - "depends": ["apcluster", "Biobase", "BiocParallel", "corpcor", "DMwR2", "geometry", "NMF", "nnls", "pcaPP", "rJava", "SummarizedExperiment"] + "depends": ["Biobase", "BiocParallel", "DMwR2", "NMF", "SummarizedExperiment", "apcluster", "corpcor", "geometry", "nnls", "pcaPP", "rJava"] }, "debrowser": { "name": "debrowser", "version": "1.32.0", "sha256": "0qgnx44j6lxw48wlpslagjq71mfx09vrfjq528z7vzn4phrax0by", - "depends": ["annotate", "AnnotationDbi", "apeglm", "ashr", "clusterProfiler", "colourpicker", "DESeq2", "DOSE", "DT", "edgeR", "enrichplot", "GenomicRanges", "ggplot2", "gplots", "Harman", "heatmaply", "igraph", "IRanges", "jsonlite", "limma", "org_Hs_eg_db", "org_Mm_eg_db", "pathview", "plotly", "RColorBrewer", "RCurl", "reshape2", "S4Vectors", "shiny", "shinyBS", "shinydashboard", "shinyjs", "stringi", "SummarizedExperiment", "sva"] + "depends": ["AnnotationDbi", "DESeq2", "DOSE", "DT", "GenomicRanges", "Harman", "IRanges", "RColorBrewer", "RCurl", "S4Vectors", "SummarizedExperiment", "annotate", "apeglm", "ashr", "clusterProfiler", "colourpicker", "edgeR", "enrichplot", "ggplot2", "gplots", "heatmaply", "igraph", "jsonlite", "limma", "org_Hs_eg_db", "org_Mm_eg_db", "pathview", "plotly", "reshape2", "shiny", "shinyBS", "shinydashboard", "shinyjs", "stringi", "sva"] }, "decompTumor2Sig": { "name": "decompTumor2Sig", "version": "2.20.0", "sha256": "1pnxnxz9zsxqs7cbxgkjapr57k2m1d57w5hak0dwcy5zcxjzmai8", - "depends": ["BiocGenerics", "Biostrings", "BSgenome_Hsapiens_UCSC_hg19", "data_table", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggseqlogo", "gridExtra", "Matrix", "plyr", "quadprog", "readxl", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation"] + "depends": ["BSgenome_Hsapiens_UCSC_hg19", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Matrix", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "VariantAnnotation", "data_table", "ggplot2", "ggseqlogo", "gridExtra", "plyr", "quadprog", "readxl"] }, "decontX": { "name": "decontX", "version": "1.2.0", "sha256": "0bxpzc9fib47c5prnshzykfd5a3mcik9n1ayd7jxygxy36icgqcj", - "depends": ["BH", "celda", "dbscan", "DelayedArray", "ggplot2", "Matrix", "MCMCprecision", "patchwork", "plyr", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "S4Vectors", "scater", "Seurat", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment", "withr"] + "depends": ["BH", "DelayedArray", "MCMCprecision", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "S4Vectors", "Seurat", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment", "celda", "dbscan", "ggplot2", "patchwork", "plyr", "reshape2", "rstan", "rstantools", "scater", "withr"] }, "decontam": { "name": "decontam", @@ -7891,25 +7921,25 @@ "name": "deconvR", "version": "1.10.0", "sha256": "181dxjj8bzy1b9xq9hd3m3ak1698w7j0sf8h9g0bhf3blzlj4pmi", - "depends": ["assertthat", "BiocGenerics", "data_table", "dplyr", "e1071", "foreach", "GenomicRanges", "IRanges", "magrittr", "MASS", "matrixStats", "methylKit", "minfi", "nnls", "quadprog", "rsq", "S4Vectors", "tidyr"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "assertthat", "data_table", "dplyr", "e1071", "foreach", "magrittr", "matrixStats", "methylKit", "minfi", "nnls", "quadprog", "rsq", "tidyr"] }, "decoupleR": { "name": "decoupleR", "version": "2.10.0", "sha256": "060ww5hlzk0dvh7a52i1nrz1s2xq5mmlw70rxpcs6d4j08k1cmic", - "depends": ["BiocParallel", "broom", "dplyr", "magrittr", "Matrix", "parallelly", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "withr"] + "depends": ["BiocParallel", "Matrix", "broom", "dplyr", "magrittr", "parallelly", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "withr"] }, "deepSNV": { "name": "deepSNV", "version": "1.50.0", "sha256": "1rcq2bg4z6z7czqi662w5gsdc1vd4p8vb353hqayhciv31dz51fr", - "depends": ["Biostrings", "GenomicRanges", "IRanges", "Rhtslib", "SummarizedExperiment", "VariantAnnotation", "VGAM"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "Rhtslib", "SummarizedExperiment", "VGAM", "VariantAnnotation"] }, "deltaCaptureC": { "name": "deltaCaptureC", "version": "1.18.0", "sha256": "019c6rlsl4glc4vkbz3kfcn9d9rh3vnfw0xbcsi33hk51z89qc78", - "depends": ["DESeq2", "GenomicRanges", "ggplot2", "IRanges", "SummarizedExperiment", "tictoc"] + "depends": ["DESeq2", "GenomicRanges", "IRanges", "SummarizedExperiment", "ggplot2", "tictoc"] }, "deltaGseg": { "name": "deltaGseg", @@ -7921,25 +7951,25 @@ "name": "demuxSNP", "version": "1.2.0", "sha256": "0inswz7w97wdy7bhl6p87cyr11z77ipf1rsmri9c2nra8s3ix51d", - "depends": ["BiocGenerics", "class", "demuxmix", "dplyr", "ensembldb", "GenomeInfoDb", "IRanges", "KernelKnn", "Matrix", "MatrixGenerics", "SingleCellExperiment", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocGenerics", "GenomeInfoDb", "IRanges", "KernelKnn", "Matrix", "MatrixGenerics", "SingleCellExperiment", "SummarizedExperiment", "VariantAnnotation", "class", "demuxmix", "dplyr", "ensembldb"] }, "demuxmix": { "name": "demuxmix", "version": "1.6.0", "sha256": "18wn36rs7iif2cxz0iz17i0dba0llk2zkw7c81bi9v4c7lsijbcb", - "depends": ["ggplot2", "gridExtra", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "ggplot2", "gridExtra"] }, "densvis": { "name": "densvis", "version": "1.14.0", "sha256": "1xsafzcg6psb4ld7nk4wgdaa3xhy8i2v86asasf8h3mi1ms7lcv0", - "depends": ["assertthat", "basilisk", "irlba", "Rcpp", "reticulate", "Rtsne"] + "depends": ["Rcpp", "Rtsne", "assertthat", "basilisk", "irlba", "reticulate"] }, "derfinder": { "name": "derfinder", "version": "1.38.0", "sha256": "1i4m20wb08zncksz415jl8bd5r4gdygk7324cp6xhijrc1pfzl1i", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "bumphunter", "derfinderHelper", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "Hmisc", "IRanges", "qvalue", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "Hmisc", "IRanges", "Rsamtools", "S4Vectors", "bumphunter", "derfinderHelper", "qvalue", "rtracklayer"] }, "derfinderHelper": { "name": "derfinderHelper", @@ -7951,13 +7981,13 @@ "name": "derfinderPlot", "version": "1.38.0", "sha256": "177j7bl552n80p2rip0zxjn72yf3pv6xg6g1hi312vapfvymcfbl", - "depends": ["derfinder", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "IRanges", "limma", "plyr", "RColorBrewer", "reshape2", "S4Vectors", "scales"] + "depends": ["GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "derfinder", "ggbio", "ggplot2", "limma", "plyr", "reshape2", "scales"] }, "destiny": { "name": "destiny", "version": "3.18.0", "sha256": "0w7j6xh0gzhahk1r8w2wgnylq5v476jzz0g14yjmszfkzm10va3h", - "depends": ["Biobase", "BiocGenerics", "ggplot_multistats", "ggplot2", "ggthemes", "irlba", "knn_covertree", "Matrix", "pcaMethods", "proxy", "Rcpp", "RcppEigen", "RcppHNSW", "rlang", "RSpectra", "scales", "scatterplot3d", "SingleCellExperiment", "smoother", "SummarizedExperiment", "tidyr", "tidyselect", "VIM"] + "depends": ["Biobase", "BiocGenerics", "Matrix", "RSpectra", "Rcpp", "RcppEigen", "RcppHNSW", "SingleCellExperiment", "SummarizedExperiment", "VIM", "ggplot2", "ggplot_multistats", "ggthemes", "irlba", "knn_covertree", "pcaMethods", "proxy", "rlang", "scales", "scatterplot3d", "smoother", "tidyr", "tidyselect"] }, "diffGeneAnalysis": { "name": "diffGeneAnalysis", @@ -7969,31 +7999,31 @@ "name": "diffHic", "version": "1.36.1", "sha256": "1wzlzmmrxmnwgqkxqwga73x0kpj7d968c7jgrln9xfilhhn4fkyy", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "csaw", "edgeR", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "IRanges", "limma", "locfit", "Rcpp", "rhdf5", "Rhtslib", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "zlibbioc"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "SummarizedExperiment", "csaw", "edgeR", "limma", "locfit", "rhdf5", "rtracklayer", "zlibbioc"] }, "diffUTR": { "name": "diffUTR", "version": "1.12.0", "sha256": "1rh3ndi8z6j4zr63w7nyvf5knrknzpl9525h3v9pc8m7gbk0jwk2", - "depends": ["ComplexHeatmap", "DEXSeq", "dplyr", "edgeR", "ensembldb", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggrepel", "IRanges", "limma", "matrixStats", "Rsubread", "rtracklayer", "S4Vectors", "stringi", "SummarizedExperiment", "viridisLite"] + "depends": ["ComplexHeatmap", "DEXSeq", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsubread", "S4Vectors", "SummarizedExperiment", "dplyr", "edgeR", "ensembldb", "ggplot2", "ggrepel", "limma", "matrixStats", "rtracklayer", "stringi", "viridisLite"] }, "diffcoexp": { "name": "diffcoexp", "version": "1.24.0", "sha256": "1cana6v3k7qab0x0fngl4abvh4nrznjwqhaq9m6qwn75ils3bh3f", - "depends": ["BiocGenerics", "DiffCorr", "igraph", "psych", "SummarizedExperiment", "WGCNA"] + "depends": ["BiocGenerics", "DiffCorr", "SummarizedExperiment", "WGCNA", "igraph", "psych"] }, "diffcyt": { "name": "diffcyt", "version": "1.24.0", "sha256": "1iyqvang5j55s19skd44c1zsxkphn3qqbl4sjhsw1y820ylws5r1", - "depends": ["circlize", "ComplexHeatmap", "dplyr", "edgeR", "flowCore", "FlowSOM", "limma", "lme4", "magrittr", "multcomp", "reshape2", "S4Vectors", "SummarizedExperiment", "tidyr"] + "depends": ["ComplexHeatmap", "FlowSOM", "S4Vectors", "SummarizedExperiment", "circlize", "dplyr", "edgeR", "flowCore", "limma", "lme4", "magrittr", "multcomp", "reshape2", "tidyr"] }, "diffuStats": { "name": "diffuStats", "version": "1.24.0", "sha256": "1d46rly5y4xc7hgjhvz2wlx6193jzpw3j8kkjvybr57d9vkl7x8s", - "depends": ["checkmate", "expm", "igraph", "MASS", "Matrix", "plyr", "precrec", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "checkmate", "expm", "igraph", "plyr", "precrec"] }, "diggit": { "name": "diggit", @@ -8005,7 +8035,7 @@ "name": "dinoR", "version": "1.0.0", "sha256": "10fmj0f3fgga26rs39c9z69w0lnb4i2i00vq354s1qh0ciya6xpc", - "depends": ["BiocGenerics", "circlize", "ComplexHeatmap", "cowplot", "dplyr", "edgeR", "GenomicRanges", "ggplot2", "Matrix", "rlang", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect"] + "depends": ["BiocGenerics", "ComplexHeatmap", "GenomicRanges", "Matrix", "SummarizedExperiment", "circlize", "cowplot", "dplyr", "edgeR", "ggplot2", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "dir_expiry": { "name": "dir.expiry", @@ -8017,19 +8047,19 @@ "name": "discordant", "version": "1.28.0", "sha256": "034nxwm0z3r0cbjpg8l6cwc6f4jnlj8v9q7r9c9ha9xk6xbah0yr", - "depends": ["Biobase", "biwt", "dplyr", "gtools", "MASS", "Rcpp"] + "depends": ["Biobase", "MASS", "Rcpp", "biwt", "dplyr", "gtools"] }, "distinct": { "name": "distinct", "version": "1.16.0", "sha256": "19xpnll4fksbw5hbk3g7a8m34p7jqj31vm7jxapwxxkmng17cpka", - "depends": ["doParallel", "doRNG", "foreach", "ggplot2", "limma", "Matrix", "Rcpp", "RcppArmadillo", "scater", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "SummarizedExperiment", "doParallel", "doRNG", "foreach", "ggplot2", "limma", "scater"] }, "dittoSeq": { "name": "dittoSeq", "version": "1.16.0", "sha256": "15p01f3yaan9x7y6ld1kx40jnbcn6vjjm5n6ir7cicdvv4w5ln49", - "depends": ["colorspace", "cowplot", "ggplot2", "ggrepel", "ggridges", "gridExtra", "pheatmap", "reshape2", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "colorspace", "cowplot", "ggplot2", "ggrepel", "ggridges", "gridExtra", "pheatmap", "reshape2"] }, "divergence": { "name": "divergence", @@ -8045,27 +8075,27 @@ }, "dmrseq": { "name": "dmrseq", - "version": "1.24.0", - "sha256": "0p7xpyl1wni17y7qsincpvllaynxwppmyg6hsza51srs4dhr7sf1", - "depends": ["AnnotationHub", "annotatr", "BiocParallel", "bsseq", "bumphunter", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "locfit", "matrixStats", "nlme", "outliers", "RColorBrewer", "rtracklayer", "S4Vectors"] + "version": "1.24.1", + "sha256": "0x7gwdzpn1ziq5vm80fs1fcyknapwjs8zfbjszw66zs36nqnqgw4", + "depends": ["AnnotationHub", "BiocParallel", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "annotatr", "bsseq", "bumphunter", "ggplot2", "locfit", "matrixStats", "nlme", "outliers", "rtracklayer"] }, "doppelgangR": { "name": "doppelgangR", "version": "1.32.0", "sha256": "1kxw5x1fwdn2hzzf6ckxz0k8qqghvr0qdx3fgx31jdla0zc9z1zm", - "depends": ["Biobase", "BiocParallel", "digest", "impute", "mnormt", "SummarizedExperiment", "sva"] + "depends": ["Biobase", "BiocParallel", "SummarizedExperiment", "digest", "impute", "mnormt", "sva"] }, "doseR": { "name": "doseR", "version": "1.20.0", "sha256": "09zr2r1vk1azrjwgx2bklv5sdypl3dba0szvh21nw1ndqyk9lwic", - "depends": ["digest", "edgeR", "lme4", "matrixStats", "mclust", "RUnit", "S4Vectors", "SummarizedExperiment"] + "depends": ["RUnit", "S4Vectors", "SummarizedExperiment", "digest", "edgeR", "lme4", "matrixStats", "mclust"] }, "doubletrouble": { "name": "doubletrouble", - "version": "1.4.0", - "sha256": "0xfrpz3ilxapcclxgf7drkwcrhvn2d70fx6q139faslp1zs19bv0", - "depends": ["AnnotationDbi", "BiocParallel", "Biostrings", "GenomicFeatures", "GenomicRanges", "ggplot2", "mclust", "MSA2dist", "rlang", "syntenet"] + "version": "1.4.1", + "sha256": "057l5qirwyh7swcyavyqd9d3qy9qxs8rasjzyglbz266sw3z5p36", + "depends": ["AnnotationDbi", "Biostrings", "GenomicFeatures", "GenomicRanges", "MSA2dist", "ggplot2", "mclust", "rlang", "syntenet"] }, "drawProteins": { "name": "drawProteins", @@ -8077,13 +8107,13 @@ "name": "dreamlet", "version": "1.2.1", "sha256": "06mpmwjxp7zs9fsggf2b3qc5vgmx6l5s7prl6l7b753zfq5gvjbg", - "depends": ["ashr", "beachmat", "BiocGenerics", "BiocParallel", "broom", "data_table", "DelayedArray", "DelayedMatrixStats", "dplyr", "edgeR", "ggbeeswarm", "ggplot2", "ggrepel", "GSEABase", "gtools", "IRanges", "irlba", "limma", "lme4", "mashr", "MASS", "Matrix", "MatrixGenerics", "metafor", "purrr", "Rcpp", "Rdpack", "remaCor", "reshape2", "rlang", "S4Vectors", "scattermore", "SingleCellExperiment", "sparseMatrixStats", "SummarizedExperiment", "tidyr", "variancePartition", "zenith"] + "depends": ["BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GSEABase", "IRanges", "MASS", "Matrix", "MatrixGenerics", "Rcpp", "Rdpack", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ashr", "beachmat", "broom", "data_table", "dplyr", "edgeR", "ggbeeswarm", "ggplot2", "ggrepel", "gtools", "irlba", "limma", "lme4", "mashr", "metafor", "purrr", "remaCor", "reshape2", "rlang", "scattermore", "sparseMatrixStats", "tidyr", "variancePartition", "zenith"] }, "drugTargetInteractions": { "name": "drugTargetInteractions", "version": "1.12.0", "sha256": "079qy3mmv9skiybzh9ls3082wqb3r9x6fn50rgcwziapixlx2rh4", - "depends": ["AnnotationFilter", "BiocFileCache", "biomaRt", "dplyr", "ensembldb", "rappdirs", "RSQLite", "S4Vectors", "UniProt_ws"] + "depends": ["AnnotationFilter", "BiocFileCache", "RSQLite", "S4Vectors", "UniProt_ws", "biomaRt", "dplyr", "ensembldb", "rappdirs"] }, "dupRadar": { "name": "dupRadar", @@ -8101,13 +8131,13 @@ "name": "easier", "version": "1.10.0", "sha256": "00c0dssv41brpwsh09zh23b7r3y7vax16viwc33nniig3f724id2", - "depends": ["BiocParallel", "coin", "decoupleR", "DESeq2", "dorothea", "dplyr", "easierData", "ggplot2", "ggpubr", "ggrepel", "magrittr", "matrixStats", "progeny", "quantiseqr", "reshape2", "rlang", "ROCR", "rstatix", "tibble", "tidyr"] + "depends": ["BiocParallel", "DESeq2", "ROCR", "coin", "decoupleR", "dorothea", "dplyr", "easierData", "ggplot2", "ggpubr", "ggrepel", "magrittr", "matrixStats", "progeny", "quantiseqr", "reshape2", "rlang", "rstatix", "tibble", "tidyr"] }, "easyRNASeq": { "name": "easyRNASeq", - "version": "2.39.0", - "sha256": "1dfg8k2jxhnyms7nkgsdyhwca0hnm45c2p3x5dxlm8kd69z7wzdj", - "depends": ["Biobase", "BiocFileCache", "BiocGenerics", "BiocParallel", "biomaRt", "Biostrings", "edgeR", "GenomeInfoDb", "genomeIntervals", "GenomicAlignments", "GenomicRanges", "IRanges", "locfit", "LSD", "rappdirs", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment"] + "version": "2.40.1", + "sha256": "1j36g6nyzbsaqz798q6yvgqx2vpjnzsi7b2pvldfpzkx1734isbx", + "depends": ["Biobase", "BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "LSD", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "biomaRt", "edgeR", "genomeIntervals", "rappdirs"] }, "easylift": { "name": "easylift", @@ -8135,9 +8165,9 @@ }, "edgeR": { "name": "edgeR", - "version": "4.2.0", - "sha256": "1w3dp3h30jqylbkql33j5ibp9i4vp7n1x6wdd2v0kdnv82il6hqg", - "depends": ["limma", "locfit", "Rcpp"] + "version": "4.2.1", + "sha256": "0c9r4gcsaf6fqkc4r49vj8az6wplqsbkd423pb4fvrv5lka9aqi9", + "depends": ["Rcpp", "limma", "locfit"] }, "eds": { "name": "eds", @@ -8149,31 +8179,31 @@ "name": "eiR", "version": "1.44.0", "sha256": "1ia8ygj2sashjwign28xfilj7j0a4r03nmgq6qzfsyw679wq4m2v", - "depends": ["BiocGenerics", "ChemmineR", "DBI", "digest", "RcppAnnoy", "RCurl", "RUnit", "snow", "snowfall"] + "depends": ["BiocGenerics", "ChemmineR", "DBI", "RCurl", "RUnit", "RcppAnnoy", "digest", "snow", "snowfall"] }, "eisaR": { "name": "eisaR", "version": "1.16.0", "sha256": "0in6bkakplpqvfr8zya850sdl0jr4h1qdsw1shvd9wjr3yxdmsad", - "depends": ["BiocGenerics", "edgeR", "GenomicRanges", "IRanges", "limma", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "edgeR", "limma"] }, "enhancerHomologSearch": { "name": "enhancerHomologSearch", "version": "1.10.0", "sha256": "00hm42zvkgz0r3s0k4ljfcbwfkysd1sw6k3zm00fxglgigvfs8r3", - "depends": ["BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "httr", "IRanges", "jsonlite", "Matrix", "motifmatchr", "pwalign", "Rcpp", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "BiocFileCache", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "S4Vectors", "httr", "jsonlite", "motifmatchr", "pwalign", "rtracklayer"] }, "enrichViewNet": { "name": "enrichViewNet", "version": "1.2.0", "sha256": "1xnxkcy0ifhf3d5qfngh5vrxz3699azjjigr17qm4zmq7qdsp7h2", - "depends": ["DOSE", "enrichplot", "gprofiler2", "jsonlite", "RCy3", "strex", "stringr"] + "depends": ["DOSE", "RCy3", "enrichplot", "gprofiler2", "jsonlite", "strex", "stringr"] }, "enrichplot": { "name": "enrichplot", - "version": "1.24.0", - "sha256": "0rkp1zidz34h4d02m4jqv509vw0wyrc084hvj3lxr7mb9j7rnq48", - "depends": ["aplot", "DOSE", "ggfun", "ggnewscale", "ggplot2", "ggraph", "ggtree", "GOSemSim", "igraph", "magrittr", "plyr", "purrr", "RColorBrewer", "reshape2", "rlang", "scatterpie", "shadowtext", "yulab_utils"] + "version": "1.24.2", + "sha256": "03p0a1vyaznk405xpkp57f22wg8x7lxiipjh101p7dq97rbzr4r7", + "depends": ["DOSE", "GOSemSim", "RColorBrewer", "aplot", "ggfun", "ggnewscale", "ggplot2", "ggraph", "ggtree", "igraph", "magrittr", "plyr", "purrr", "reshape2", "rlang", "scatterpie", "shadowtext", "yulab_utils"] }, "ensemblVEP": { "name": "ensemblVEP", @@ -8185,73 +8215,73 @@ "name": "ensembldb", "version": "2.28.0", "sha256": "10h3ngwq99y0d3ksf0303qjw263ard1zsawpq1pw5n9r5g7xll47", - "depends": ["AnnotationDbi", "AnnotationFilter", "Biobase", "BiocGenerics", "Biostrings", "curl", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "ProtGenerics", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors"] + "depends": ["AnnotationDbi", "AnnotationFilter", "Biobase", "BiocGenerics", "Biostrings", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "ProtGenerics", "RSQLite", "Rsamtools", "S4Vectors", "curl", "rtracklayer"] }, "epiNEM": { "name": "epiNEM", "version": "1.28.0", "sha256": "156qj9r121j6c9vr6fh2zi9aaq3kq9gabjxg4l5wj47vj1d427az", - "depends": ["BoolNet", "e1071", "graph", "gtools", "igraph", "latex2exp", "lattice", "latticeExtra", "minet", "mnem", "pcalg", "RColorBrewer"] + "depends": ["BoolNet", "RColorBrewer", "e1071", "graph", "gtools", "igraph", "latex2exp", "lattice", "latticeExtra", "minet", "mnem", "pcalg"] }, "epialleleR": { "name": "epialleleR", "version": "1.12.0", "sha256": "1jdhzcs6l3v4765dxlqc7gn2yxy9fvzk94aixl5bqxmn4v4hyasq", - "depends": ["BH", "BiocGenerics", "data_table", "GenomeInfoDb", "GenomicRanges", "Rcpp", "Rhtslib", "SummarizedExperiment", "VariantAnnotation", "zlibbioc"] + "depends": ["BH", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "Rcpp", "Rhtslib", "SummarizedExperiment", "VariantAnnotation", "data_table", "zlibbioc"] }, "epidecodeR": { "name": "epidecodeR", "version": "1.12.0", "sha256": "0gmdmjvl93zgsi9yclscw94y1caspb2pnjawxhv3yqmnhjq3dzhz", - "depends": ["dplyr", "EnvStats", "GenomicRanges", "ggplot2", "ggpubr", "IRanges", "rstatix", "rtracklayer"] + "depends": ["EnvStats", "GenomicRanges", "IRanges", "dplyr", "ggplot2", "ggpubr", "rstatix", "rtracklayer"] }, "epigenomix": { "name": "epigenomix", "version": "1.44.0", "sha256": "1c1lwz5lbq69anpk1q7dhlfrvb66g8vrfyw7130x1c6y5yryk23k", - "depends": ["beadarray", "Biobase", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "MCMCpack", "Rsamtools", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "MCMCpack", "Rsamtools", "S4Vectors", "SummarizedExperiment", "beadarray"] }, "epigraHMM": { "name": "epigraHMM", "version": "1.12.0", "sha256": "1zkb81jd2gsj92yzlxhshaw4csap9b06gyy5gl1qi3k3qkx69dq9", - 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"depends": ["BiocGenerics", "GenomicRanges", "IRanges", "plotrix", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "plotrix"] }, "epistasisGA": { "name": "epistasisGA", "version": "1.6.0", "sha256": "1rq1jgd95zamg3fsyj8nbvg95chjaf9d30xlg8d6rr071ya9f03v", - "depends": ["batchtools", "BH", "bigmemory", "BiocParallel", "data_table", "ggplot2", "igraph", "matrixStats", "qgraph", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["BH", "BiocParallel", "Rcpp", "RcppArmadillo", "batchtools", "bigmemory", "data_table", "ggplot2", "igraph", "matrixStats", "qgraph", "survival"] }, "epivizr": { "name": "epivizr", "version": "2.34.0", "sha256": "07y6h9dk0mz5nh1ivbrf1l2smlw7y0ygdmh9k1fn50lc6120dq37", - "depends": ["bumphunter", "epivizrData", "epivizrServer", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "bumphunter", "epivizrData", "epivizrServer"] }, "epivizrChart": { "name": "epivizrChart", @@ -8263,85 +8293,85 @@ "name": "epivizrData", "version": "1.32.0", "sha256": "11x47w0rvn109brah7140nn5844vvmdpbgdc2c3q2ycxm40fl6rq", - "depends": ["Biobase", "ensembldb", "epivizrServer", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "OrganismDbi", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "OrganismDbi", "S4Vectors", "SummarizedExperiment", "ensembldb", "epivizrServer"] }, "epivizrServer": { "name": "epivizrServer", "version": "1.32.0", "sha256": "11ba652yhnl7xi7fgw3s32siwd38mrsxsklm0n6f5v081g3a7g3s", - "depends": ["httpuv", "mime", "R6", "rjson"] + "depends": ["R6", "httpuv", "mime", "rjson"] }, "epivizrStandalone": { "name": "epivizrStandalone", "version": "1.32.0", "sha256": "0qrngsga0qfadbijjikfzgpl6i0vnvkcssnf1z3y1fm8mkq35b4z", - "depends": ["BiocGenerics", "epivizr", "epivizrServer", "GenomeInfoDb", "GenomicFeatures", "git2r", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "S4Vectors", "epivizr", "epivizrServer", "git2r"] }, "erccdashboard": { "name": "erccdashboard", "version": "1.38.0", "sha256": "0cghksf9gkgkcak8493s4pixq2nd3a7zc91vqq158g5na6ca24n7", - "depends": ["edgeR", "ggplot2", "gplots", "gridExtra", "gtools", "limma", "locfit", "MASS", "plyr", "qvalue", "reshape2", "ROCR", "scales", "stringr"] + "depends": ["MASS", "ROCR", "edgeR", "ggplot2", "gplots", "gridExtra", "gtools", "limma", "locfit", "plyr", "qvalue", "reshape2", "scales", "stringr"] }, "erma": { "name": "erma", "version": "1.20.0", "sha256": "0f4y0szdqhg63vaw7f1lmgzb72bhfpz20g9naq84s8bq2xsf8cy6", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicFiles", "GenomicRanges", "ggplot2", "Homo_sapiens", "IRanges", "rtracklayer", "S4Vectors", "shiny", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicFiles", "GenomicRanges", "Homo_sapiens", "IRanges", "S4Vectors", "SummarizedExperiment", "ggplot2", "rtracklayer", "shiny"] }, "esATAC": { "name": "esATAC", "version": "1.26.0", "sha256": "0gfil57zc5bzhk29cw16bv02kng7hqs5ry1kakly1kvcfafcn87s", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocManager", "Biostrings", "BSgenome", "ChIPseeker", "clusterProfiler", "corrplot", "digest", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "igraph", "IRanges", "JASPAR2018", "knitr", "magrittr", "motifmatchr", "pipeFrame", "R_utils", "Rbowtie2", "Rcpp", "rJava", "rmarkdown", "Rsamtools", "rtracklayer", "S4Vectors", "ShortRead", "TFBSTools", "VennDiagram"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "BiocManager", "Biostrings", "ChIPseeker", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "JASPAR2018", "R_utils", "Rbowtie2", "Rcpp", "Rsamtools", "S4Vectors", "ShortRead", "TFBSTools", "VennDiagram", "clusterProfiler", "corrplot", "digest", "ggplot2", "igraph", "knitr", "magrittr", "motifmatchr", "pipeFrame", "rJava", "rmarkdown", "rtracklayer"] }, "escape": { "name": "escape", "version": "2.0.0", "sha256": "03wbrxd7kjyl3d4s418ql5fv7bmwdfyfp10jd8knr0xis7vxmz2x", - "depends": ["AUCell", "BiocParallel", "dplyr", "ggdist", "ggplot2", "ggpointdensity", "ggridges", "GSEABase", "GSVA", "MatrixGenerics", "msigdbr", "patchwork", "reshape2", "SeuratObject", "SingleCellExperiment", "stringr", "SummarizedExperiment", "UCell"] + "depends": ["AUCell", "BiocParallel", "GSEABase", "GSVA", "MatrixGenerics", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "UCell", "dplyr", "ggdist", "ggplot2", "ggpointdensity", "ggridges", "msigdbr", "patchwork", "reshape2", "stringr"] }, "escheR": { "name": "escheR", "version": "1.4.0", "sha256": "16sqxsvpvb9idb7crbr3kq5xcifpzdw29lcxvrn2kxq003n7hbqw", - "depends": ["ggplot2", "rlang", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "ggplot2", "rlang"] }, "esetVis": { "name": "esetVis", "version": "1.30.0", "sha256": "1b51cv3bl11jymjwnd8150lw5ab7bpa4jj09ssisn3qnb5nym7lj", - "depends": ["Biobase", "hexbin", "MASS", "MLP", "mpm", "Rtsne"] + "depends": ["Biobase", "MASS", "MLP", "Rtsne", "hexbin", "mpm"] }, "eudysbiome": { "name": "eudysbiome", "version": "1.34.0", "sha256": "12kbk17rfh1icxdj5kkz66d72p9rq4bw9nh52bvah5i3bq7wi5zn", - "depends": ["Biostrings", "plyr", "R_utils", "Rsamtools"] + "depends": ["Biostrings", "R_utils", "Rsamtools", "plyr"] }, "evaluomeR": { "name": "evaluomeR", - "version": "1.20.0", - "sha256": "1rcffshqlkilmfyziz95pac4c0rm5jjq0y9i3r47z55zmrnr4lz4", - "depends": ["class", "cluster", "corrplot", "flexmix", "fpc", "ggdendro", "ggplot2", "kableExtra", "MASS", "matrixStats", "mclust", "MultiAssayExperiment", "plotrix", "prabclus", "randomForest", "Rdpack", "reshape2", "SummarizedExperiment"] + "version": "1.20.5", + "sha256": "18hp7j6m7fpnaa4l9clqff1xg0lmvwsh0s26c5gq75r1d6k05m4p", + "depends": ["MASS", "MultiAssayExperiment", "RSKC", "Rdpack", "SummarizedExperiment", "class", "cluster", "corrplot", "dendextend", "dplyr", "flexmix", "fpc", "ggdendro", "ggplot2", "kableExtra", "matrixStats", "mclust", "plotrix", "prabclus", "randomForest", "reshape2", "sparcl"] }, "extraChIPs": { "name": "extraChIPs", - "version": "1.8.1", - "sha256": "0qmm7sffwv2b1qinwm39pahb4i1m2jk4hzwli481by24vc6p1y7j", - "depends": ["BiocIO", "BiocParallel", "broom", "ComplexUpset", "csaw", "dplyr", "edgeR", "forcats", "GenomeInfoDb", "GenomicInteractions", "GenomicRanges", "ggforce", "ggplot2", "ggrepel", "ggside", "glue", "InteractionSet", "IRanges", "matrixStats", "patchwork", "RColorBrewer", "rlang", "Rsamtools", "rtracklayer", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "vctrs", "VennDiagram"] + "version": "1.8.5", + "sha256": "1cznznlr2w8p5wjc4i6vcmxv9lhvgf7xglxd75gm9s60w8hi31yj", + "depends": ["BiocIO", "BiocParallel", "ComplexUpset", "GenomeInfoDb", "GenomicInteractions", "GenomicRanges", "IRanges", "InteractionSet", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VennDiagram", "broom", "csaw", "dplyr", "edgeR", "forcats", "ggforce", "ggplot2", "ggrepel", "ggside", "glue", "matrixStats", "patchwork", "rlang", "rtracklayer", "scales", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "fCCAC": { "name": "fCCAC", "version": "1.30.0", "sha256": "0qvwsqvv1g4fcjhy88kq2z5nzlhhvx6p6ffaqis70wbgvr5p4aw0", - "depends": ["ComplexHeatmap", "fda", "genomation", "GenomicRanges", "ggplot2", "IRanges", "RColorBrewer", "S4Vectors"] + "depends": ["ComplexHeatmap", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "fda", "genomation", "ggplot2"] }, "fCI": { "name": "fCI", "version": "1.34.0", "sha256": "0szrdyw57k6wa8zr80gyxidfhcc1v88gj6bjank3dc478f1kn9d0", - "depends": ["FNN", "gtools", "psych", "rgl", "VennDiagram", "zoo"] + "depends": ["FNN", "VennDiagram", "gtools", "psych", "rgl", "zoo"] }, "fabia": { "name": "fabia", @@ -8359,31 +8389,31 @@ "name": "factR", "version": "1.6.0", "sha256": "1y19wd0j9rlbfi2rqk73gcyszbg4p4cl2w3zqckyvv9969i9rjid", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "crayon", "data_table", "dplyr", "drawProteins", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "pbapply", "purrr", "RCurl", "rlang", "rtracklayer", "S4Vectors", "stringr", "tibble", "tidyr", "wiggleplotr", "XML"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RCurl", "S4Vectors", "XML", "crayon", "data_table", "dplyr", "drawProteins", "ggplot2", "pbapply", "purrr", "rlang", "rtracklayer", "stringr", "tibble", "tidyr", "wiggleplotr"] }, "faers": { "name": "faers", - "version": "1.0.0", - "sha256": "04q6h3hc2697dpk66ra6lppv808n0vgxk1py26nxjkpmqyc076xx", - "depends": ["BiocParallel", "brio", "cli", "curl", "data_table", "httr2", "MCMCpack", "openEBGM", "rlang", "rvest", "vroom", "xml2"] + "version": "1.0.3", + "sha256": "09cha2kzc3bjgd4yww9pymvk7d1wnw3qh70vl1sra52vz89hif4j", + "depends": ["BiocParallel", "MCMCpack", "brio", "cli", "curl", "data_table", "httr2", "openEBGM", "rlang", "rvest", "vroom", "xml2"] }, "famat": { "name": "famat", "version": "1.14.0", "sha256": "099l12m27ys5glbigi9q9hr7941yy9jxrzsbxf993gs71qajlsgh", - "depends": ["BiasedUrn", "clusterProfiler", "dplyr", "DT", "GO_db", "gprofiler2", "KEGGREST", "magrittr", "mgcv", "ontologyIndex", "org_Hs_eg_db", "plotly", "reactome_db", "rWikiPathways", "shiny", "shinyBS", "shinydashboard", "stringr", "tidyr"] + "depends": ["BiasedUrn", "DT", "GO_db", "KEGGREST", "clusterProfiler", "dplyr", "gprofiler2", "magrittr", "mgcv", "ontologyIndex", "org_Hs_eg_db", "plotly", "rWikiPathways", "reactome_db", "shiny", "shinyBS", "shinydashboard", "stringr", "tidyr"] }, "fastLiquidAssociation": { "name": "fastLiquidAssociation", "version": "1.40.0", "sha256": "0nhr2w0b491xh6bc2j9mc9a87yblr3l4kmnm8gxlnc27fav3jzj8", - "depends": ["doParallel", "Hmisc", "impute", "LiquidAssociation", "preprocessCore", "WGCNA"] + "depends": ["Hmisc", "LiquidAssociation", "WGCNA", "doParallel", "impute", "preprocessCore"] }, "fastreeR": { "name": "fastreeR", "version": "1.8.0", "sha256": "0r1xngxdblgshgkr4l762kgxqaq9s79g4f3lirlkd9bb248pzfvc", - "depends": ["ape", "data_table", "dynamicTreeCut", "R_utils", "rJava", "stringr"] + "depends": ["R_utils", "ape", "data_table", "dynamicTreeCut", "rJava", "stringr"] }, "fastseg": { "name": "fastseg", @@ -8395,7 +8425,7 @@ "name": "fcScan", "version": "1.18.0", "sha256": "1gb15zrv44yn65wns7dk24rp54qv7wafqxgk1q8jnbkq9lp5wj2y", - "depends": ["doParallel", "foreach", "GenomicRanges", "IRanges", "plyr", "rtracklayer", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["GenomicRanges", "IRanges", "SummarizedExperiment", "VariantAnnotation", "doParallel", "foreach", "plyr", "rtracklayer"] }, "fdrame": { "name": "fdrame", @@ -8407,31 +8437,31 @@ "name": "fedup", "version": "1.12.0", "sha256": "0q1bvx8zv5c1pzi82v8yxgdxb85l7nzan8k6xwsr1xmdy224lpgf", - "depends": ["data_table", "dplyr", "forcats", "ggplot2", "ggthemes", "openxlsx", "RColorBrewer", "RCy3", "tibble"] + "depends": ["RColorBrewer", "RCy3", "data_table", "dplyr", "forcats", "ggplot2", "ggthemes", "openxlsx", "tibble"] }, "fenr": { "name": "fenr", - "version": "1.2.0", - "sha256": "0d0rjvnbyp8w3hkb38fgbig1211w4gj74lgdnbx52jxym2pkg32y", - "depends": ["assertthat", "BiocFileCache", "dplyr", "ggplot2", "httr2", "progress", "purrr", "readr", "rlang", "rvest", "shiny", "stringr", "tibble", "tidyr", "tidyselect"] + "version": "1.2.1", + "sha256": "19hhdvfmml8njsw86ny1hp9x8pn7hdcqbbyd6qygr8z0lqpfpb9d", + "depends": ["BiocFileCache", "assertthat", "dplyr", "ggplot2", "httr2", "progress", "purrr", "readr", "rlang", "rvest", "shiny", "stringr", "tibble", "tidyr", "tidyselect"] }, "ffpe": { "name": "ffpe", "version": "1.48.0", "sha256": "1y769nnwbc9rjjpwxqgfw0v58ym4g9qy695adcyswl8z955yhjax", - "depends": ["affy", "Biobase", "BiocGenerics", "lumi", "methylumi", "sfsmisc", "TTR"] + "depends": ["Biobase", "BiocGenerics", "TTR", "affy", "lumi", "methylumi", "sfsmisc"] }, "fgga": { "name": "fgga", "version": "1.12.0", "sha256": "18bvf1qjdzd66sf479ghf3pg4cnwpwmzkhcvi6zriqd7mvsll8fr", - "depends": ["BiocFileCache", "curl", "e1071", "graph", "gRbase", "igraph", "jsonlite", "RBGL"] + "depends": ["BiocFileCache", "RBGL", "curl", "e1071", "gRbase", "graph", "igraph", "jsonlite"] }, "fgsea": { "name": "fgsea", "version": "1.30.0", "sha256": "0nnvqsyrj24h5y8qw8llk9f4jgy0v734k37kcksfcpja17frdyjy", - "depends": ["BH", "BiocParallel", "cowplot", "data_table", "fastmatch", "ggplot2", "Matrix", "Rcpp", "scales"] + "depends": ["BH", "BiocParallel", "Matrix", "Rcpp", "cowplot", "data_table", "fastmatch", "ggplot2", "scales"] }, "findIPs": { "name": "findIPs", @@ -8443,19 +8473,19 @@ "name": "fishpond", "version": "2.10.0", "sha256": "02lzx8whxd3z4k0saf0vaq4np8lag00nkp3hd6da1w91vczs1kjl", - "depends": ["abind", "GenomicRanges", "gtools", "IRanges", "jsonlite", "Matrix", "matrixStats", "qvalue", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "svMisc"] + "depends": ["GenomicRanges", "IRanges", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "abind", "gtools", "jsonlite", "matrixStats", "qvalue", "svMisc"] }, "flagme": { "name": "flagme", "version": "1.60.0", "sha256": "0gi2hwd13q4rdmzf45xcbmdpr3b3hbqabv6csmjfiqqqj4cl3wy9", - "depends": ["CAMERA", "gcspikelite", "gplots", "MASS", "SparseM", "xcms"] + "depends": ["CAMERA", "MASS", "SparseM", "gcspikelite", "gplots", "xcms"] }, "flowAI": { "name": "flowAI", "version": "1.34.0", "sha256": "1siqza92iak5lz38hbfznqndrmq995ihp6sbam0n2d3mj8vwv9qa", - "depends": ["changepoint", "flowCore", "ggplot2", "knitr", "plyr", "RColorBrewer", "reshape2", "rmarkdown", "scales"] + "depends": ["RColorBrewer", "changepoint", "flowCore", "ggplot2", "knitr", "plyr", "reshape2", "rmarkdown", "scales"] }, "flowBeads": { "name": "flowBeads", @@ -8491,7 +8521,7 @@ "name": "flowCore", "version": "2.16.0", "sha256": "1zq3qypmzk9ld48r50fmygfdqwwyykii8l0l6gh5bdrdan760bfn", - "depends": ["BH", "Biobase", "BiocGenerics", "cpp11", "cytolib", "matrixStats", "Rcpp", "RProtoBufLib", "S4Vectors"] + "depends": ["BH", "Biobase", "BiocGenerics", "RProtoBufLib", "Rcpp", "S4Vectors", "cpp11", "cytolib", "matrixStats"] }, "flowCut": { "name": "flowCut", @@ -8527,13 +8557,13 @@ "name": "flowGraph", "version": "1.12.0", "sha256": "1zxpiz8nm3awzkf7wqql73b9kgydgza72yp2kv59gyf1lcsli0ns", - "depends": ["data_table", "effsize", "furrr", "future", "ggiraph", "ggplot2", "ggrepel", "gridExtra", "htmlwidgets", "igraph", "Matrix", "matrixStats", "purrr", "Rdpack", "stringi", "stringr", "visNetwork"] + "depends": ["Matrix", "Rdpack", "data_table", "effsize", "furrr", "future", "ggiraph", "ggplot2", "ggrepel", "gridExtra", "htmlwidgets", "igraph", "matrixStats", "purrr", "stringi", "stringr", "visNetwork"] }, "flowMatch": { "name": "flowMatch", "version": "1.40.0", "sha256": "0k83702b9k5nsng67awr7mz3jq9yxs4dkvvg2hcn29m1s42a2i63", - "depends": ["Biobase", "flowCore", "Rcpp"] + "depends": ["Biobase", "Rcpp", "flowCore"] }, "flowMeans": { "name": "flowMeans", @@ -8545,7 +8575,7 @@ "name": "flowMerge", "version": "2.52.0", "sha256": "1z675mj3jsi0n9x03nbw12z001c8jz9pm64ypvb1g6f51bnq1fyx", - "depends": ["feature", "flowClust", "flowCore", "foreach", "graph", "Rgraphviz", "rrcov", "snow"] + "depends": ["Rgraphviz", "feature", "flowClust", "flowCore", "foreach", "graph", "rrcov", "snow"] }, "flowPeaks": { "name": "flowPeaks", @@ -8557,7 +8587,7 @@ "name": "flowPloidy", "version": "1.30.0", "sha256": "06grhvskia03xakfcs776fiz7i3i04crysykrmnyz1jxbaa2irba", - "depends": ["car", "caTools", "flowCore", "knitr", "minpack_lm", "rmarkdown", "shiny"] + "depends": ["caTools", "car", "flowCore", "knitr", "minpack_lm", "rmarkdown", "shiny"] }, "flowPlots": { "name": "flowPlots", @@ -8575,7 +8605,7 @@ "name": "flowStats", "version": "4.16.0", "sha256": "0q8g3sqmbhinfrb63yhv4lsczjz7pqwhwwsdlz2cg7s8yhp0cj6v", - "depends": ["Biobase", "BiocGenerics", "clue", "cluster", "corpcor", "fda", "flowCore", "flowViz", "flowWorkspace", "KernSmooth", "ks", "lattice", "MASS", "mnormt", "ncdfFlow", "RColorBrewer", "rrcov"] + "depends": ["Biobase", "BiocGenerics", "KernSmooth", "MASS", "RColorBrewer", "clue", "cluster", "corpcor", "fda", "flowCore", "flowViz", "flowWorkspace", "ks", "lattice", "mnormt", "ncdfFlow", "rrcov"] }, "flowTime": { "name": "flowTime", @@ -8599,19 +8629,19 @@ "name": "flowViz", "version": "1.68.0", "sha256": "1iz4skfs68jg2a59kfaxllf19mp9pk9mpfc2jh3vyas14c3l3zzj", - "depends": ["Biobase", "flowCore", "hexbin", "IDPmisc", "KernSmooth", "lattice", "latticeExtra", "MASS", "RColorBrewer"] + "depends": ["Biobase", "IDPmisc", "KernSmooth", "MASS", "RColorBrewer", "flowCore", "hexbin", "lattice", "latticeExtra"] }, "flowWorkspace": { "name": "flowWorkspace", "version": "4.16.0", "sha256": "0k22hifg4sv0xiw983gf1d6y7zkn9072famwj72x47w8vag4i0xz", - "depends": ["BH", "Biobase", "BiocGenerics", "cpp11", "cytolib", "data_table", "DelayedArray", "dplyr", "flowCore", "ggplot2", "graph", "matrixStats", "ncdfFlow", "RBGL", "Rgraphviz", "Rhdf5lib", "RProtoBufLib", "S4Vectors", "scales", "XML"] + "depends": ["BH", "Biobase", "BiocGenerics", "DelayedArray", "RBGL", "RProtoBufLib", "Rgraphviz", "Rhdf5lib", "S4Vectors", "XML", "cpp11", "cytolib", "data_table", "dplyr", "flowCore", "ggplot2", "graph", "matrixStats", "ncdfFlow", "scales"] }, "flowcatchR": { "name": "flowcatchR", "version": "1.38.0", "sha256": "0g9jza9gs526ch5sa9m91yrmf6n8l73052n41r2zvdwamzh9a6r9", - "depends": ["abind", "BiocParallel", "colorRamps", "EBImage", "plotly", "shiny"] + "depends": ["BiocParallel", "EBImage", "abind", "colorRamps", "plotly", "shiny"] }, "fmcsR": { "name": "fmcsR", @@ -8629,7 +8659,7 @@ "name": "fobitools", "version": "1.12.0", "sha256": "0n9zckl2zx7hcqz94xa32frra7v11y4gss1wdcdicj2sm40k9hgq", - "depends": ["clisymbols", "crayon", "dplyr", "fgsea", "ggplot2", "ggraph", "magrittr", "ontologyIndex", "purrr", "RecordLinkage", "stringr", "textclean", "tictoc", "tidygraph", "tidyr", "vroom"] + "depends": ["RecordLinkage", "clisymbols", "crayon", "dplyr", "fgsea", "ggplot2", "ggraph", "magrittr", "ontologyIndex", "purrr", "stringr", "textclean", "tictoc", "tidygraph", "tidyr", "vroom"] }, "frenchFISH": { "name": "frenchFISH", @@ -8641,13 +8671,13 @@ "name": "frma", "version": "1.56.0", "sha256": "0gg6hybrysqsd04dv3z7p1wx7zb35zk10f76c3yfhxg1wzv0f4wr", - "depends": ["affy", "Biobase", "BiocGenerics", "DBI", "MASS", "oligo", "oligoClasses", "preprocessCore"] + "depends": ["Biobase", "BiocGenerics", "DBI", "MASS", "affy", "oligo", "oligoClasses", "preprocessCore"] }, "frmaTools": { "name": "frmaTools", "version": "1.56.0", "sha256": "0ksnk253vvxrfql6wgbzmm64173fqv2lcls83iv4lgihix978x5x", - "depends": ["affy", "Biobase", "DBI", "preprocessCore"] + "depends": ["Biobase", "DBI", "affy", "preprocessCore"] }, "funtooNorm": { "name": "funtooNorm", @@ -8659,13 +8689,13 @@ "name": "gCrisprTools", "version": "2.10.0", "sha256": "1h7qx8j46sqhkrdln7mbw38w7p3n6c8sw1311kk2pady0bw14hqh", - "depends": ["Biobase", "ComplexHeatmap", "ggplot2", "limma", "rmarkdown", "RobustRankAggreg", "SummarizedExperiment"] + "depends": ["Biobase", "ComplexHeatmap", "RobustRankAggreg", "SummarizedExperiment", "ggplot2", "limma", "rmarkdown"] }, "gDNAx": { "name": "gDNAx", - "version": "1.2.0", - "sha256": "12pyiwhwlxskq17vwmdwh5g3zlzbd15mbrxjv1pliblbzjvxfpzx", - "depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "BiocParallel", "Biostrings", "bitops", "cli", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "matrixStats", "plotrix", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment"] + "version": "1.2.1", + "sha256": "1fr5kyy2jhn2qia9wqd505kp9w5ad6d7bxvi5073m6rw1b7x6231", + "depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "bitops", "cli", "matrixStats", "plotrix"] }, "gDR": { "name": "gDR", @@ -8677,13 +8707,13 @@ "name": "gDRcore", "version": "1.2.0", "sha256": "14hnmym7pzgfm4gmvq0dc0bym3kpr769fcdpspvqyzgq3b5swbva", - "depends": ["BiocParallel", "BumpyMatrix", "checkmate", "data_table", "futile_logger", "gDRutils", "MultiAssayExperiment", "purrr", "S4Vectors", "stringr", "SummarizedExperiment"] + "depends": ["BiocParallel", "BumpyMatrix", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "checkmate", "data_table", "futile_logger", "gDRutils", "purrr", "stringr"] }, "gDRimport": { "name": "gDRimport", "version": "1.2.0", "sha256": "1jfp3vgy2r0kmakn063bp1nrnwjfx2xxz0drkry5ghdmjig0g25y", - "depends": ["assertthat", "BumpyMatrix", "checkmate", "CoreGx", "data_table", "futile_logger", "gDRutils", "magrittr", "MultiAssayExperiment", "openxlsx", "PharmacoGx", "readxl", "rio", "S4Vectors", "stringi", "SummarizedExperiment", "tibble", "XML", "yaml"] + "depends": ["BumpyMatrix", "CoreGx", "MultiAssayExperiment", "PharmacoGx", "S4Vectors", "SummarizedExperiment", "XML", "assertthat", "checkmate", "data_table", "futile_logger", "gDRutils", "magrittr", "openxlsx", "readxl", "rio", "stringi", "tibble", "yaml"] }, "gDRstyle": { "name": "gDRstyle", @@ -8695,25 +8725,25 @@ "name": "gDRutils", "version": "1.2.0", "sha256": "0ql75k7aysf5kphjkajp2sshg953vx3nskg6qzhd8cc4lvldx9kq", - "depends": ["BiocParallel", "BumpyMatrix", "checkmate", "data_table", "drc", "jsonlite", "jsonvalidate", "MultiAssayExperiment", "S4Vectors", "stringr", "SummarizedExperiment"] + "depends": ["BiocParallel", "BumpyMatrix", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "checkmate", "data_table", "drc", "jsonlite", "jsonvalidate", "stringr"] }, "gINTomics": { "name": "gINTomics", "version": "1.0.0", "sha256": "0dscrxy846v5nv1fc0wfd5v7axwdhwpxhh0y9dwq25sdyfzknl8g", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "biomaRt", "callr", "circlize", "clusterProfiler", "ComplexHeatmap", "dplyr", "DT", "edgeR", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggridges", "ggtree", "ggvenn", "gtools", "InteractiveComplexHeatmap", "limma", "MASS", "MultiAssayExperiment", "OmnipathR", "org_Hs_eg_db", "org_Mm_eg_db", "plotly", "plyr", "randomForest", "RColorBrewer", "ReactomePA", "reshape2", "shiny", "shiny_gosling", "shinydashboard", "stringi", "stringr", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "visNetwork"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "ComplexHeatmap", "DT", "GenomicFeatures", "GenomicRanges", "InteractiveComplexHeatmap", "MASS", "MultiAssayExperiment", "OmnipathR", "RColorBrewer", "ReactomePA", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "biomaRt", "callr", "circlize", "clusterProfiler", "dplyr", "edgeR", "ggplot2", "ggridges", "ggtree", "ggvenn", "gtools", "limma", "org_Hs_eg_db", "org_Mm_eg_db", "plotly", "plyr", "randomForest", "reshape2", "shiny", "shiny_gosling", "shinydashboard", "stringi", "stringr", "visNetwork"] }, "gaga": { "name": "gaga", "version": "2.50.0", "sha256": "10qckg06yf44x1giisglw978l63c4p9bdlrfh8q0i7cb19zihbnf", - "depends": ["Biobase", "coda", "EBarrays", "mgcv"] + "depends": ["Biobase", "EBarrays", "coda", "mgcv"] }, "gage": { "name": "gage", "version": "2.54.0", "sha256": "0iwdv9y5x0na38arjqacz00s7plk7aqc1h2ynhlpbyl3nz0a0kyq", - "depends": ["AnnotationDbi", "GO_db", "graph", "KEGGREST"] + "depends": ["AnnotationDbi", "GO_db", "KEGGREST", "graph"] }, "garfield": { "name": "garfield", @@ -8725,13 +8755,13 @@ "name": "gatom", "version": "1.2.0", "sha256": "1cmhlhr2gkfgpgncr9dy3qq0q764vhr5c7zgpbnnvp5qg95y6n6g", - "depends": ["BioNet", "data_table", "GGally", "ggplot2", "htmltools", "htmlwidgets", "igraph", "intergraph", "network", "plyr", "pryr", "shinyCyJS", "sna", "XML"] + "depends": ["BioNet", "GGally", "XML", "data_table", "ggplot2", "htmltools", "htmlwidgets", "igraph", "intergraph", "network", "plyr", "pryr", "shinyCyJS", "sna"] }, "gcapc": { "name": "gcapc", "version": "1.28.0", "sha256": "0k6k73i1mv6pxkpy2mq3xr0rfpn8rqa5wj1hjx3r3dqpw4rv8izl", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "matrixStats", "Rsamtools", "S4Vectors"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "Rsamtools", "S4Vectors", "matrixStats"] }, "gcatest": { "name": "gcatest", @@ -8743,7 +8773,7 @@ "name": "gcrma", "version": "2.76.0", "sha256": "01b9b4v19yh42552awl21yyx9vhf9yh9r3l8849x4zwjpnf6anp3", - "depends": ["affy", "affyio", "Biobase", "BiocManager", "Biostrings", "XVector"] + "depends": ["Biobase", "BiocManager", "Biostrings", "XVector", "affy", "affyio"] }, "gdsfmt": { "name": "gdsfmt", @@ -8755,7 +8785,7 @@ "name": "geNetClassifier", "version": "1.44.0", "sha256": "0jfczma8sh9dza105v306xr371f8mndndm6kw3ydgqlxd8zk3a6l", - "depends": ["Biobase", "e1071", "EBarrays", "minet"] + "depends": ["Biobase", "EBarrays", "e1071", "minet"] }, "gemini": { "name": "gemini", @@ -8765,9 +8795,9 @@ }, "gemma_R": { "name": "gemma.R", - "version": "3.0.6", - "sha256": "0aprq1ac2npnbs8ic8lq2z1rp67gsff7450sg08gri40mcrn8xz5", - "depends": ["assertthat", "Biobase", "bit64", "data_table", "digest", "glue", "httr", "jsonlite", "lubridate", "magrittr", "memoise", "rappdirs", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "version": "3.0.14", + "sha256": "1psiag87wbg7g0jjpd6hy1b4jcr8hx6hflqa5p0nnkw6zxp5cxkk", + "depends": ["Biobase", "R_utils", "S4Vectors", "SummarizedExperiment", "assertthat", "base64enc", "bit64", "data_table", "digest", "glue", "httr", "jsonlite", "lubridate", "magrittr", "memoise", "rappdirs", "rlang", "stringr", "tibble", "tidyr"] }, "genArise": { "name": "genArise", @@ -8803,19 +8833,19 @@ "name": "geneXtendeR", "version": "1.30.0", "sha256": "06rmxlahnf0xiwvyfl6h9727g8cm24zk6p27j5bb4vln4phb81x7", - "depends": ["AnnotationDbi", "BiocStyle", "data_table", "dplyr", "GO_db", "networkD3", "org_Rn_eg_db", "RColorBrewer", "rtracklayer", "SnowballC", "tm", "wordcloud"] + "depends": ["AnnotationDbi", "BiocStyle", "GO_db", "RColorBrewer", "SnowballC", "data_table", "dplyr", "networkD3", "org_Rn_eg_db", "rtracklayer", "tm", "wordcloud"] }, "genefilter": { "name": "genefilter", "version": "1.86.0", "sha256": "0jp7jvgzb1bs0p76j9k8lhgliipjnif6bng7hdn5wi744jb5fmpr", - "depends": ["annotate", "AnnotationDbi", "Biobase", "MatrixGenerics", "survival"] + "depends": ["AnnotationDbi", "Biobase", "MatrixGenerics", "annotate", "survival"] }, "genefu": { "name": "genefu", "version": "2.36.0", "sha256": "032xfs2vp0n0r3sz79fs0v8q28n2sqbnazfwkc3p9dwh4s7nqfwx", - "depends": ["AIMS", "amap", "biomaRt", "impute", "limma", "mclust", "survcomp"] + "depends": ["AIMS", "amap", "biomaRt", "iC10", "impute", "limma", "mclust", "survcomp"] }, "geneplast": { "name": "geneplast", @@ -8827,7 +8857,7 @@ "name": "geneplotter", "version": "1.82.0", "sha256": "19znr3vwp20x84jiwy0im7s6vd8a71yng8w2ji88ffzq0xdkyyjm", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "lattice", "RColorBrewer"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "RColorBrewer", "annotate", "lattice"] }, "genoCN": { "name": "genoCN", @@ -8839,13 +8869,13 @@ "name": "genomation", "version": "1.36.0", "sha256": "1bfy46kka77q93s42hsbxpiynfkin5mh7cz3w592smw2dzkh01j4", - "depends": ["Biostrings", "BSgenome", "data_table", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "gridBase", "impute", "IRanges", "matrixStats", "plotrix", "plyr", "Rcpp", "readr", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors", "seqPattern"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rcpp", "Rsamtools", "S4Vectors", "data_table", "ggplot2", "gridBase", "impute", "matrixStats", "plotrix", "plyr", "readr", "reshape2", "rtracklayer", "seqPattern"] }, "genomeIntervals": { "name": "genomeIntervals", "version": "1.60.0", "sha256": "1gyp2aa335gljb4igwg8c92m4rwwxwsv49dlj341gqphbx8b1vbr", - "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "intervals", "IRanges", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "intervals"] }, "genomes": { "name": "genomes", @@ -8857,25 +8887,25 @@ "name": "genomicInstability", "version": "1.10.0", "sha256": "08clvnj3pfxr0y8n2bh55x7aqs8pa6kjy5w8si78r5k2ywwxxl5y", - "depends": ["checkmate", "mixtools", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "checkmate", "mixtools"] }, "gep2pep": { "name": "gep2pep", "version": "1.24.0", "sha256": "1i8m3k7l5ymx6c0d6hrl6c1yn2fjvvrrpsf08r64ksl750cvab87", - "depends": ["Biobase", "digest", "foreach", "GSEABase", "iterators", "repo", "rhdf5", "XML"] + "depends": ["Biobase", "GSEABase", "XML", "digest", "foreach", "iterators", "repo", "rhdf5"] }, "gespeR": { "name": "gespeR", "version": "1.36.0", "sha256": "1c7pimggz4px7455frmg4fjbajl9pnw1wdi480wf0hcjfakk1i9h", - "depends": ["Biobase", "biomaRt", "cellHTS2", "doParallel", "dplyr", "foreach", "ggplot2", "glmnet", "Matrix", "reshape2"] + "depends": ["Biobase", "Matrix", "biomaRt", "cellHTS2", "doParallel", "dplyr", "foreach", "ggplot2", "glmnet", "reshape2"] }, "getDEE2": { "name": "getDEE2", "version": "1.14.0", "sha256": "1hkxyic2pjpxj5mbdf2lmkk7jm8ycmcjwychhy62qlvvcg58cd21", - "depends": ["htm2txt", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "htm2txt"] }, "geva": { "name": "geva", @@ -8893,43 +8923,43 @@ "name": "ggbio", "version": "1.52.0", "sha256": "0g6h1h8azy79pzm0g8967f58gp33nl8866b285ybq6501nj8pb1p", - "depends": ["AnnotationDbi", "AnnotationFilter", "Biobase", "BiocGenerics", "Biostrings", "biovizBase", "BSgenome", "ensembldb", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "GGally", "ggplot2", "gridExtra", "gtable", "Hmisc", "IRanges", "OrganismDbi", "reshape2", "rlang", "Rsamtools", "rtracklayer", "S4Vectors", "scales", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["AnnotationDbi", "AnnotationFilter", "BSgenome", "Biobase", "BiocGenerics", "Biostrings", "GGally", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Hmisc", "IRanges", "OrganismDbi", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "biovizBase", "ensembldb", "ggplot2", "gridExtra", "gtable", "reshape2", "rlang", "rtracklayer", "scales"] }, "ggcyto": { "name": "ggcyto", "version": "1.32.0", "sha256": "0z4cfpylj2y3jcljzg15fpjnrhrpzgw49kcprq5sg4cxr96ia2rm", - "depends": ["data_table", "flowCore", "flowWorkspace", "ggplot2", "gridExtra", "hexbin", "ncdfFlow", "plyr", "RColorBrewer", "rlang", "scales"] + "depends": ["RColorBrewer", "data_table", "flowCore", "flowWorkspace", "ggplot2", "gridExtra", "hexbin", "ncdfFlow", "plyr", "rlang", "scales"] }, "ggkegg": { "name": "ggkegg", - "version": "1.2.0", - "sha256": "177hz7xfkfjzqb7v2c3jf94jqa0ckcmxb5w64jy25lci8bl1klaw", - "depends": ["AnnotationDbi", "BiocFileCache", "data_table", "dplyr", "GetoptLong", "ggplot2", "ggraph", "gtable", "igraph", "magick", "org_Hs_eg_db", "patchwork", "shadowtext", "stringr", "tibble", "tidygraph", "XML"] + "version": "1.2.2", + "sha256": "0j77l3bzddmkf45v66zvhypramhv9fprv4rxz5r6vkjhabgyjdfb", + "depends": ["AnnotationDbi", "BiocFileCache", "GetoptLong", "XML", "data_table", "dplyr", "ggplot2", "ggraph", "gtable", "igraph", "magick", "org_Hs_eg_db", "patchwork", "shadowtext", "stringr", "tibble", "tidygraph"] }, "ggmanh": { "name": "ggmanh", "version": "1.8.0", "sha256": "0h7idg7s2s51gcd4fjbpad0kaq13xa5jxv34fwrw02285rl7zw7b", - "depends": ["gdsfmt", "ggplot2", "ggrepel", "RColorBrewer", "rlang", "scales", "SeqArray"] + "depends": ["RColorBrewer", "SeqArray", "gdsfmt", "ggplot2", "ggrepel", "rlang", "scales"] }, "ggmsa": { "name": "ggmsa", "version": "1.10.0", "sha256": "0pmy9aakp503aa3d9g96ajms153kphyr0shlnap5axxy6s99s2ak", - "depends": ["aplot", "Biostrings", "dplyr", "ggalt", "ggforce", "ggplot2", "ggtree", "magrittr", "R4RNA", "RColorBrewer", "seqmagick", "statebins", "tidyr"] + "depends": ["Biostrings", "R4RNA", "RColorBrewer", "aplot", "dplyr", "ggalt", "ggforce", "ggplot2", "ggtree", "magrittr", "seqmagick", "statebins", "tidyr"] }, "ggsc": { "name": "ggsc", "version": "1.2.0", "sha256": "1869xwlc4hqyzankrx3m7jara9am86pc8cw5lfdqfvf2ndp6ijdv", - "depends": ["cli", "dplyr", "ggfun", "ggplot2", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppParallel", "rlang", "scales", "scattermore", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidydr", "tidyr", "yulab_utils"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "RcppParallel", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "cli", "dplyr", "ggfun", "ggplot2", "rlang", "scales", "scattermore", "tibble", "tidydr", "tidyr", "yulab_utils"] }, "ggspavis": { "name": "ggspavis", "version": "1.10.0", "sha256": "0acbsbqnkl1xw9i3pgz1bibgzyvv52jzmyvnmggn5ag92ldd459c", - "depends": ["ggplot2", "ggrepel", "ggside", "RColorBrewer", "scales", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["RColorBrewer", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "ggplot2", "ggrepel", "ggside", "scales"] }, "ggtree": { "name": "ggtree", @@ -8953,31 +8983,31 @@ "name": "ggtreeSpace", "version": "1.0.0", "sha256": "0ny22m469mnr70ipwy6brch1g5vklk5i0qkbgbpwrsdvi6vkibsr", - "depends": ["ape", "dplyr", "GGally", "ggplot2", "ggtree", "interp", "phytools", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["GGally", "ape", "dplyr", "ggplot2", "ggtree", "interp", "phytools", "rlang", "tibble", "tidyr", "tidyselect"] }, "ginmappeR": { "name": "ginmappeR", - "version": "1.0.0", - "sha256": "1xq49lsfw7zri66nxn1z8s2w9ylhl3s07lwm7vqq6xjgfwfd8jn2", - "depends": ["cachem", "httr", "KEGGREST", "memoise", "rentrez", "UniProt_ws", "XML"] + "version": "1.0.4", + "sha256": "0s13z3naarspmdp9v82xjxqqhxygcsvw5vq6l1lmhj070fg8b9nz", + "depends": ["KEGGREST", "UniProt_ws", "XML", "cachem", "httr", "jsonlite", "memoise", "rentrez", "rvest"] }, "girafe": { "name": "girafe", "version": "1.56.0", "sha256": "17ma5xfqzy19cigim0bqkqvwln3qji2f5x4qwb74i40j2lbqn9qi", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "genomeIntervals", "intervals", "IRanges", "pwalign", "Rsamtools", "S4Vectors", "ShortRead"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "genomeIntervals", "intervals", "pwalign"] }, "glmGamPoi": { "name": "glmGamPoi", "version": "1.16.0", "sha256": "1my8v0zx5xsxjf8dj2yw92b8zp725hxhb2vrl5ccgz2w9xkn0dkj", - "depends": ["beachmat", "BiocGenerics", "DelayedArray", "DelayedMatrixStats", "HDF5Array", "MatrixGenerics", "matrixStats", "Rcpp", "RcppArmadillo", "rlang", "SingleCellExperiment", "SummarizedExperiment", "vctrs"] + "depends": ["BiocGenerics", "DelayedArray", "DelayedMatrixStats", "HDF5Array", "MatrixGenerics", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "SummarizedExperiment", "beachmat", "matrixStats", "rlang", "vctrs"] }, "glmSparseNet": { "name": "glmSparseNet", "version": "1.22.0", "sha256": "1yyl2i3f5s1l5q17471zwlj9cksbsnkv227qdlsgvzl0i9sh4m2h", - "depends": ["biomaRt", "checkmate", "dplyr", "forcats", "futile_logger", "ggplot2", "glmnet", "glue", "httr", "lifecycle", "Matrix", "MultiAssayExperiment", "readr", "rlang", "SummarizedExperiment", "survminer", "TCGAutils"] + "depends": ["Matrix", "MultiAssayExperiment", "SummarizedExperiment", "TCGAutils", "biomaRt", "checkmate", "dplyr", "forcats", "futile_logger", "ggplot2", "glmnet", "glue", "httr", "lifecycle", "readr", "rlang", "survminer"] }, "globalSeq": { "name": "globalSeq", @@ -8989,19 +9019,19 @@ "name": "globaltest", "version": "5.58.0", "sha256": "1cpvs1jcp9ibis06pkbqvhhksy6cis0zynx774d0hqdbb9ljl945", - "depends": ["annotate", "AnnotationDbi", "Biobase", "survival"] + "depends": ["AnnotationDbi", "Biobase", "annotate", "survival"] }, "gmapR": { "name": "gmapR", "version": "1.46.0", "sha256": "0zmn3gj5aamrkx0pa15fd2n2l7i0z8fkr4i2b9i50qgp7b46yv03", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "VariantAnnotation"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "VariantAnnotation", "rtracklayer"] }, "gmoviz": { "name": "gmoviz", "version": "1.16.0", "sha256": "01znh8vfhqyls6f1y0zl3hnp67j4q6gzf6fjv3dx214ks6h3vk47", - "depends": ["BiocGenerics", "Biostrings", "circlize", "colorspace", "ComplexHeatmap", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "gridBase", "IRanges", "pracma", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["BiocGenerics", "Biostrings", "ComplexHeatmap", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "circlize", "colorspace", "gridBase", "pracma", "rtracklayer"] }, "goProfiles": { "name": "goProfiles", @@ -9013,13 +9043,13 @@ "name": "goSTAG", "version": "1.28.0", "sha256": "195vdjaxq8xwyz5ib9csk0a1fw6l9pzkpji78l3pbh9p5clw5592", - "depends": ["AnnotationDbi", "biomaRt", "GO_db", "memoise"] + "depends": ["AnnotationDbi", "GO_db", "biomaRt", "memoise"] }, "goSorensen": { "name": "goSorensen", "version": "1.6.0", "sha256": "1n0i9xmdxnh52lg60klblgi6bzfa910p4ajavir725p84hbqxdjh", - "depends": ["clusterProfiler", "GO_db", "goProfiles", "org_Hs_eg_db", "stringr"] + "depends": ["GO_db", "clusterProfiler", "goProfiles", "org_Hs_eg_db", "stringr"] }, "goTools": { "name": "goTools", @@ -9031,7 +9061,7 @@ "name": "goseq", "version": "1.56.0", "sha256": "0bc7dcpz0agbc42f8agf05amyhpavz55fdp622if5af5dn1ww6pr", - "depends": ["AnnotationDbi", "BiasedUrn", "BiocGenerics", "geneLenDataBase", "GO_db", "mgcv"] + "depends": ["AnnotationDbi", "BiasedUrn", "BiocGenerics", "GO_db", "geneLenDataBase", "mgcv"] }, "gpls": { "name": "gpls", @@ -9043,19 +9073,19 @@ "name": "gpuMagic", "version": "1.20.0", "sha256": "06ga6xkk95kgnzgy95kzysz8nim9v9aq2s6742hhknjndhy59n28", - "depends": ["BiocGenerics", "Deriv", "DescTools", "digest", "pryr", "Rcpp", "stringr"] + "depends": ["BiocGenerics", "Deriv", "DescTools", "Rcpp", "digest", "pryr", "stringr"] }, "granulator": { "name": "granulator", "version": "1.12.0", "sha256": "0757xhxn3156687nz8dksqqs0ifafrdwz0am532pw3xf5hirdz81", - "depends": ["cowplot", "dplyr", "dtangle", "e1071", "epiR", "ggplot2", "ggplotify", "limSolve", "magrittr", "MASS", "nnls", "pheatmap", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["MASS", "cowplot", "dplyr", "dtangle", "e1071", "epiR", "ggplot2", "ggplotify", "limSolve", "magrittr", "nnls", "pheatmap", "purrr", "rlang", "tibble", "tidyr"] }, "graper": { "name": "graper", "version": "1.20.0", "sha256": "1hczvcv3kxzbxigbcxmsiwadxbwldipsv7slmsyznrkpwws4liwi", - "depends": ["BH", "cowplot", "ggplot2", "Matrix", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Matrix", "Rcpp", "RcppArmadillo", "cowplot", "ggplot2", "matrixStats"] }, "graph": { "name": "graph", @@ -9073,37 +9103,37 @@ "name": "groHMM", "version": "1.38.0", "sha256": "1vmck9ridjjk22477sv8wx0x7n5irrsaf6nsh9lm3krk4i3iv715", - "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "rtracklayer", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "rtracklayer"] }, "gscreend": { "name": "gscreend", "version": "1.18.0", "sha256": "1y41rai3hhp290ga0ddcgs0jyri4aavcbyycs8z887h787sbihrn", - "depends": ["BiocParallel", "fGarch", "nloptr", "SummarizedExperiment"] + "depends": ["BiocParallel", "SummarizedExperiment", "fGarch", "nloptr"] }, "gsean": { "name": "gsean", "version": "1.24.0", "sha256": "14b4fg51j995af4i8lx84908jnlhw1y7j01871iy80s13d8nnz9b", - "depends": ["fgsea", "PPInfer"] + "depends": ["PPInfer", "fgsea"] }, "gtrellis": { "name": "gtrellis", "version": "1.36.0", "sha256": "1qlsjpjxcw96qhrqjlbbinpry9yagn50jc3dnz459dbfvnywr82q", - "depends": ["circlize", "GenomicRanges", "GetoptLong", "IRanges"] + "depends": ["GenomicRanges", "GetoptLong", "IRanges", "circlize"] }, "gwascat": { "name": "gwascat", "version": "2.36.0", "sha256": "08b70drlasws3h9d8iznaxxp0qf4n1fi943m4yngy1c65h3a30rc", - "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "readr", "S4Vectors", "snpStats", "VariantAnnotation"] + "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "VariantAnnotation", "readr", "snpStats"] }, "gwasurvivr": { "name": "gwasurvivr", "version": "1.22.0", "sha256": "0d9a9lrdpizh0bayq5yhqrssarbk90afn9s3cbkdxjrjgvlcair7", - "depends": ["GWASTools", "matrixStats", "SNPRelate", "SummarizedExperiment", "survival", "VariantAnnotation"] + "depends": ["GWASTools", "SNPRelate", "SummarizedExperiment", "VariantAnnotation", "matrixStats", "survival"] }, "gypsum": { "name": "gypsum", @@ -9115,7 +9145,7 @@ "name": "h5vc", "version": "2.38.0", "sha256": "0nv6x14adjwz7izsfyirnr13k9aa5kh34nqq9p4lawxa76d0bv4p", - "depends": ["abind", "BatchJobs", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gridExtra", "h5vcData", "IRanges", "reshape", "rhdf5", "Rhtslib", "Rsamtools", "S4Vectors"] + "depends": ["BatchJobs", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rhtslib", "Rsamtools", "S4Vectors", "abind", "ggplot2", "gridExtra", "h5vcData", "reshape", "rhdf5"] }, "hapFabia": { "name": "hapFabia", @@ -9127,37 +9157,43 @@ "name": "hca", "version": "1.12.0", "sha256": "143np5y93b3ik5lrjiz7hhwwp89hq8h9ygvprydwcvn6k530111r", - "depends": ["BiocFileCache", "digest", "dplyr", "DT", "httr", "jsonlite", "miniUI", "readr", "shiny", "tibble", "tidyr"] + "depends": ["BiocFileCache", "DT", "digest", "dplyr", "httr", "jsonlite", "miniUI", "readr", "shiny", "tibble", "tidyr"] + }, + "hdxmsqc": { + "name": "hdxmsqc", + "version": "1.0.1", + "sha256": "1ynjkwzfa84p2hg56nimbhfpw9ayah23lw8nb0mhkkqvb50nar19", + "depends": ["BiocStyle", "MsCoreUtils", "QFeatures", "S4Vectors", "Spectra", "dplyr", "ggplot2", "knitr", "tidyr"] }, "heatmaps": { "name": "heatmaps", "version": "1.28.0", "sha256": "0295lsiicwcdsnm1annyix7na6xipmvany8qpqwi4d87i5z2imhw", - "depends": ["BiocGenerics", "Biostrings", "EBImage", "GenomeInfoDb", "GenomicRanges", "IRanges", "KernSmooth", "Matrix", "plotrix", "RColorBrewer"] + "depends": ["BiocGenerics", "Biostrings", "EBImage", "GenomeInfoDb", "GenomicRanges", "IRanges", "KernSmooth", "Matrix", "RColorBrewer", "plotrix"] }, "hermes": { "name": "hermes", - "version": "1.8.0", - "sha256": "0acnxrbjdmjr73y12m4k62sazixpfp01790byrybg6l76j4y2akm", - "depends": ["assertthat", "Biobase", "BiocGenerics", "biomaRt", "checkmate", "circlize", "ComplexHeatmap", "DESeq2", "dplyr", "edgeR", "EnvStats", "forcats", "GenomicRanges", "ggfortify", "ggplot2", "ggrepel", "IRanges", "lifecycle", "limma", "magrittr", "matrixStats", "MultiAssayExperiment", "purrr", "R6", "Rdpack", "rlang", "S4Vectors", "SummarizedExperiment", "tidyr"] + "version": "1.8.1", + "sha256": "0mm9lvpgzbpcdbwks3ly7q4pl3w596jcin1c23mkvsj7gfh6r4nl", + "depends": ["Biobase", "BiocGenerics", "ComplexHeatmap", "DESeq2", "EnvStats", "GenomicRanges", "IRanges", "MultiAssayExperiment", "R6", "Rdpack", "S4Vectors", "SummarizedExperiment", "assertthat", "biomaRt", "checkmate", "circlize", "dplyr", "edgeR", "forcats", "ggfortify", "ggplot2", "ggrepel", "lifecycle", "limma", "magrittr", "matrixStats", "purrr", "rlang", "tidyr"] }, "hiAnnotator": { "name": "hiAnnotator", "version": "1.38.0", "sha256": "1mi15zpqbsf1x2bdagnd7mwspz7pdiq8v7s6a44zwxl0sas2qdmi", - "depends": ["BSgenome", "dplyr", "foreach", "GenomicRanges", "ggplot2", "iterators", "rtracklayer", "scales"] + "depends": ["BSgenome", "GenomicRanges", "dplyr", "foreach", "ggplot2", "iterators", "rtracklayer", "scales"] }, "hiReadsProcessor": { "name": "hiReadsProcessor", "version": "1.40.0", "sha256": "11hiz5ymjyjmsr78060602xi07lbjsq7gs4nh0pknjph2mzx9nqi", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "dplyr", "GenomicAlignments", "GenomicRanges", "hiAnnotator", "pwalign", "readxl", "sonicLength"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomicAlignments", "GenomicRanges", "dplyr", "hiAnnotator", "pwalign", "readxl", "sonicLength"] }, "hicVennDiagram": { "name": "hicVennDiagram", "version": "1.2.0", "sha256": "02ym5qiz38viddsrxmn3v6q791gwrc36hi505vcaar1fj2kblx2w", - "depends": ["ComplexUpset", "eulerr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "htmlwidgets", "InteractionSet", "IRanges", "reshape2", "rtracklayer", "S4Vectors", "svglite"] + "depends": ["ComplexUpset", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "S4Vectors", "eulerr", "ggplot2", "htmlwidgets", "reshape2", "rtracklayer", "svglite"] }, "hierGWAS": { "name": "hierGWAS", @@ -9175,7 +9211,7 @@ "name": "hipathia", "version": "3.4.0", "sha256": "140ihldl1m7b249d184f717w9pycrsrx13gzjhamjvpdrn96hra4", - "depends": ["AnnotationHub", "coin", "DelayedArray", "dplyr", "ggplot2", "ggpubr", "igraph", "limma", "matrixStats", "MetBrewer", "MultiAssayExperiment", "preprocessCore", "reshape2", "S4Vectors", "servr", "SummarizedExperiment", "tibble", "visNetwork"] + "depends": ["AnnotationHub", "DelayedArray", "MetBrewer", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "coin", "dplyr", "ggplot2", "ggpubr", "igraph", "limma", "matrixStats", "preprocessCore", "reshape2", "servr", "tibble", "visNetwork"] }, "hmdbQuery": { "name": "hmdbQuery", @@ -9187,7 +9223,7 @@ "name": "hoodscanR", "version": "1.2.0", "sha256": "1dqmj5nisrndkldsa2qhy50a2bckvvyf96hcya6yqcvz6hb3w7d0", - "depends": ["circlize", "ComplexHeatmap", "ggplot2", "knitr", "RANN", "Rcpp", "rlang", "rmarkdown", "scico", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "RANN", "Rcpp", "SpatialExperiment", "SummarizedExperiment", "circlize", "ggplot2", "knitr", "rlang", "rmarkdown", "scico"] }, "hopach": { "name": "hopach", @@ -9211,13 +9247,13 @@ "name": "hypeR", "version": "2.2.0", "sha256": "0qsz1fklbwlzlm6fk1xr27gv7ynvqgpzd3s8657pv79q2f7wkljf", - "depends": ["BiocStyle", "dplyr", "ggforce", "ggplot2", "htmltools", "httr", "igraph", "kableExtra", "magrittr", "msigdbr", "openxlsx", "purrr", "R6", "reactable", "reshape2", "rlang", "rmarkdown", "scales", "shiny", "stringr", "visNetwork"] + "depends": ["BiocStyle", "R6", "dplyr", "ggforce", "ggplot2", "htmltools", "httr", "igraph", "kableExtra", "magrittr", "msigdbr", "openxlsx", "purrr", "reactable", "reshape2", "rlang", "rmarkdown", "scales", "shiny", "stringr", "visNetwork"] }, "hyperdraw": { "name": "hyperdraw", "version": "1.56.0", "sha256": "104xwij9vq5gwq4ml7fnhsp4apcldbgxmhppwklg6zqdfixpmig5", - "depends": ["graph", "hypergraph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph", "hypergraph"] }, "hypergraph": { "name": "hypergraph", @@ -9247,7 +9283,7 @@ "name": "iCARE", "version": "1.32.0", "sha256": "0m6cfcpviw1fxcg73zzjv1s8ynx47x2mfdpydsnkwfvc3r536xca", - "depends": ["gtools", "Hmisc", "plotrix"] + "depends": ["Hmisc", "gtools", "plotrix"] }, "iCNV": { "name": "iCNV", @@ -9259,13 +9295,13 @@ "name": "iCOBRA", "version": "1.32.0", "sha256": "1m3awsz8h3gbi82an73kbxcsch2gl737zaanckl1vq2ghymqykrp", - "depends": ["dplyr", "DT", "ggplot2", "limma", "markdown", "reshape2", "rlang", "ROCR", "scales", "shiny", "shinyBS", "shinydashboard", "UpSetR"] + "depends": ["DT", "ROCR", "UpSetR", "dplyr", "ggplot2", "limma", "markdown", "reshape2", "rlang", "scales", "shiny", "shinyBS", "shinydashboard"] }, "iCheck": { "name": "iCheck", "version": "1.34.0", "sha256": "1yz4f8cs8vna8rq3064md37mgidg4nzn2204zzbbpnwsx23mz1mc", - "depends": ["affy", "Biobase", "GeneSelectMMD", "gplots", "limma", "lmtest", "lumi", "MASS", "preprocessCore", "randomForest", "rgl", "scatterplot3d"] + "depends": ["Biobase", "GeneSelectMMD", "MASS", "affy", "gplots", "limma", "lmtest", "lumi", "preprocessCore", "randomForest", "rgl", "scatterplot3d"] }, "iChip": { "name": "iChip", @@ -9289,7 +9325,7 @@ "name": "iNETgrate", "version": "1.2.0", "sha256": "1lsj5lwwfr4h1n1nlgnbncrgsy4mzhj5lzygcb691fkvk84ki09p", - "depends": ["BiocStyle", "caret", "GenomicRanges", "glmnet", "gplots", "Homo_sapiens", "igraph", "matrixStats", "minfi", "Pigengene", "Rfast", "SummarizedExperiment", "survival", "tidyr", "tidyselect", "WGCNA"] + "depends": ["BiocStyle", "GenomicRanges", "Homo_sapiens", "Pigengene", "Rfast", "SummarizedExperiment", "WGCNA", "caret", "glmnet", "gplots", "igraph", "matrixStats", "minfi", "survival", "tidyr", "tidyselect"] }, "iPAC": { "name": "iPAC", @@ -9301,55 +9337,55 @@ "name": "iPath", "version": "1.10.0", "sha256": "0dh57yif0wcapr54ba9ln45s9s9m52rzfgapz429i40dqbbc518v", - "depends": ["BiocParallel", "ggplot2", "ggpubr", "matrixStats", "mclust", "Rcpp", "RcppArmadillo", "survival", "survminer"] + "depends": ["BiocParallel", "Rcpp", "RcppArmadillo", "ggplot2", "ggpubr", "matrixStats", "mclust", "survival", "survminer"] }, "iSEE": { "name": "iSEE", "version": "2.16.0", "sha256": "0rkk8n0hwmbqlnmjcdcljbsqqmbgw4x5cyjl5fndvzjs6xls4fal", - "depends": ["BiocGenerics", "circlize", "colourpicker", "ComplexHeatmap", "DT", "ggplot2", "ggrepel", "igraph", "listviewer", "mgcv", "rintrojs", "S4Vectors", "shiny", "shinyAce", "shinydashboard", "shinyjs", "shinyWidgets", "SingleCellExperiment", "SummarizedExperiment", "vipor", "viridisLite"] + "depends": ["BiocGenerics", "ComplexHeatmap", "DT", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circlize", "colourpicker", "ggplot2", "ggrepel", "igraph", "listviewer", "mgcv", "rintrojs", "shiny", "shinyAce", "shinyWidgets", "shinydashboard", "shinyjs", "vipor", "viridisLite"] }, "iSEEde": { "name": "iSEEde", "version": "1.2.0", "sha256": "1fm7nav15kh2sn8lcgnywacsnv5z9mirv3vjvkk298141gdvnyiv", - "depends": ["DESeq2", "edgeR", "iSEE", "S4Vectors", "shiny", "SummarizedExperiment"] + "depends": ["DESeq2", "S4Vectors", "SummarizedExperiment", "edgeR", "iSEE", "shiny"] }, "iSEEfier": { "name": "iSEEfier", "version": "1.0.0", "sha256": "0qg64qp2b3c5l11xa1hb8whvshv9xdi27da2j447jxa81r42xgyh", - "depends": ["BiocBaseUtils", "ggplot2", "igraph", "iSEE", "iSEEu", "rlang", "SingleCellExperiment", "SummarizedExperiment", "visNetwork"] + "depends": ["BiocBaseUtils", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "iSEE", "iSEEu", "igraph", "rlang", "visNetwork"] }, "iSEEhex": { "name": "iSEEhex", "version": "1.6.0", "sha256": "0lwifv4bpb8hp0y5d2fphzclf3c223x015bc7jj92kmpzl0hg41h", - "depends": ["ggplot2", "hexbin", "iSEE", "shiny", "SummarizedExperiment"] + "depends": ["SummarizedExperiment", "ggplot2", "hexbin", "iSEE", "shiny"] }, "iSEEhub": { "name": "iSEEhub", "version": "1.6.0", "sha256": "0pwplhddy3nyszzbkjrv79kypc50pxr7jckfjdd0qy10v16314id", - "depends": ["AnnotationHub", "BiocManager", "DT", "ExperimentHub", "iSEE", "rintrojs", "S4Vectors", "shiny", "shinydashboard", "shinyjs", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["AnnotationHub", "BiocManager", "DT", "ExperimentHub", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "iSEE", "rintrojs", "shiny", "shinydashboard", "shinyjs"] }, "iSEEindex": { "name": "iSEEindex", "version": "1.2.0", "sha256": "0v8fww0rbldg6hdqyg9cfrsisahpwmc7q6pk156gz497av8gz250", - "depends": ["BiocFileCache", "DT", "iSEE", "paws_storage", "rintrojs", "shiny", "shinydashboard", "shinyjs", "SingleCellExperiment", "stringr", "SummarizedExperiment", "urltools"] + "depends": ["BiocFileCache", "DT", "SingleCellExperiment", "SummarizedExperiment", "iSEE", "paws_storage", "rintrojs", "shiny", "shinydashboard", "shinyjs", "stringr", "urltools"] }, "iSEEpathways": { "name": "iSEEpathways", "version": "1.2.0", "sha256": "168abrcfrrcnaz50lgkfqvap30xq63fjp61v365ar5zsh7qvys41", - "depends": ["ggplot2", "iSEE", "S4Vectors", "shiny", "shinyWidgets", "SummarizedExperiment"] + "depends": ["S4Vectors", "SummarizedExperiment", "ggplot2", "iSEE", "shiny", "shinyWidgets"] }, "iSEEu": { "name": "iSEEu", "version": "1.16.0", "sha256": "10l539zk0xha45h58j5y9sl0fmpr7vxy30n6xa54lbs3fs324jyv", - "depends": ["colourpicker", "DT", "ggplot2", "IRanges", "iSEE", "iSEEhex", "S4Vectors", "shiny", "shinyAce", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DT", "IRanges", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "colourpicker", "ggplot2", "iSEE", "iSEEhex", "shiny", "shinyAce"] }, "iSeq": { "name": "iSeq", @@ -9361,7 +9397,7 @@ "name": "iasva", "version": "1.22.0", "sha256": "14p159ffi41lg56kjc2yafrxd8d0miqnavdnbspaal8l6r4qr10y", - "depends": ["BiocParallel", "cluster", "irlba", "SummarizedExperiment"] + "depends": ["BiocParallel", "SummarizedExperiment", "cluster", "irlba"] }, "ibh": { "name": "ibh", @@ -9373,19 +9409,19 @@ "name": "icetea", "version": "1.22.0", "sha256": "0l204ak1br5xhlmp21v4qxc5fzrpg74ylaac63dvvhpkhphl51iz", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "csaw", "DESeq2", "edgeR", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "limma", "Rsamtools", "rtracklayer", "S4Vectors", "ShortRead", "SummarizedExperiment", "TxDb_Dmelanogaster_UCSC_dm6_ensGene", "VariantAnnotation"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "DESeq2", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "TxDb_Dmelanogaster_UCSC_dm6_ensGene", "VariantAnnotation", "csaw", "edgeR", "ggplot2", "limma", "rtracklayer"] }, "ideal": { "name": "ideal", "version": "1.28.0", "sha256": "1fmqawzlg7dzhb6imsq9wjb3i4qr91f6aj4n4akpkrky7djdn3p2", - "depends": ["AnnotationDbi", "base64enc", "BiocParallel", "DESeq2", "dplyr", "DT", "GenomicRanges", "ggplot2", "ggrepel", "GO_db", "goseq", "GOstats", "gplots", "heatmaply", "IHW", "IRanges", "knitr", "limma", "pcaExplorer", "pheatmap", "plotly", "rentrez", "rintrojs", "rlang", "rmarkdown", "S4Vectors", "shiny", "shinyAce", "shinyBS", "shinydashboard", "stringr", "SummarizedExperiment", "topGO", "UpSetR"] + "depends": ["AnnotationDbi", "BiocParallel", "DESeq2", "DT", "GO_db", "GOstats", "GenomicRanges", "IHW", "IRanges", "S4Vectors", "SummarizedExperiment", "UpSetR", "base64enc", "dplyr", "ggplot2", "ggrepel", "goseq", "gplots", "heatmaply", "knitr", "limma", "pcaExplorer", "pheatmap", "plotly", "rentrez", "rintrojs", "rlang", "rmarkdown", "shiny", "shinyAce", "shinyBS", "shinydashboard", "stringr", "topGO"] }, "idiogram": { "name": "idiogram", "version": "1.80.0", "sha256": "0hhgxsc4lk2lpi7ih1z72n4ly8kh8pj9j3w79x7nn0jha5krjv48", - "depends": ["annotate", "Biobase", "plotrix"] + "depends": ["Biobase", "annotate", "plotrix"] }, "idpr": { "name": "idpr", @@ -9397,19 +9433,19 @@ "name": "idr2d", "version": "1.18.0", "sha256": "1c1x9nazmapdk820i3k2b4b956zy5ym333y2fjxg9nqfsvq153mn", - "depends": ["dplyr", "futile_logger", "GenomeInfoDb", "GenomicRanges", "ggplot2", "idr", "IRanges", "magrittr", "reticulate", "scales", "stringr"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "dplyr", "futile_logger", "ggplot2", "idr", "magrittr", "reticulate", "scales", "stringr"] }, "igvR": { "name": "igvR", "version": "1.24.0", "sha256": "0rkps3zj1zg8rksyrnp94xvasgrlvwnq4fqgkrhr8wn0jcqkpna1", - "depends": ["BiocGenerics", "BrowserViz", "GenomicAlignments", "GenomicRanges", "httpuv", "httr", "RColorBrewer", "rtracklayer", "VariantAnnotation"] + "depends": ["BiocGenerics", "BrowserViz", "GenomicAlignments", "GenomicRanges", "RColorBrewer", "VariantAnnotation", "httpuv", "httr", "rtracklayer"] }, "igvShiny": { "name": "igvShiny", - "version": "1.0.0", - "sha256": "0nb8cals6nw5l70yrnwq1pcfdc3m0w9ncsrdrd2zsm4ni2lpqjvx", - "depends": ["BiocGenerics", "checkmate", "futile_logger", "GenomeInfoDbData", "GenomicRanges", "htmlwidgets", "httr", "jsonlite", "randomcoloR", "RCurl", "shiny"] + "version": "1.0.1", + "sha256": "02n15bi9qxs5q1ripnvhjk4m9k9rwahi1dbwh4ym85aqjzxqpqks", + "depends": ["BiocGenerics", "GenomeInfoDbData", "GenomicRanges", "RCurl", "checkmate", "futile_logger", "htmlwidgets", "httr", "jsonlite", "randomcoloR", "shiny"] }, "illuminaio": { "name": "illuminaio", @@ -9421,7 +9457,7 @@ "name": "imcRtools", "version": "1.10.0", "sha256": "0wp5f0lrxi2f7kvdqqjl6gdhybcipppg3mr25r9zsfbaxf5d0160", - "depends": ["abind", "BiocNeighbors", "BiocParallel", "concaveman", "cytomapper", "data_table", "distances", "dplyr", "DT", "EBImage", "ggplot2", "ggraph", "igraph", "magrittr", "MatrixGenerics", "pheatmap", "readr", "rlang", "RTriangle", "S4Vectors", "scuttle", "sf", "SingleCellExperiment", "SpatialExperiment", "stringr", "SummarizedExperiment", "tidygraph", "tidyselect", "viridis", "vroom"] + "depends": ["BiocNeighbors", "BiocParallel", "DT", "EBImage", "MatrixGenerics", "RTriangle", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "abind", "concaveman", "cytomapper", "data_table", "distances", "dplyr", "ggplot2", "ggraph", "igraph", "magrittr", "pheatmap", "readr", "rlang", "scuttle", "sf", "stringr", "tidygraph", "tidyselect", "viridis", "vroom"] }, "immunoClust": { "name": "immunoClust", @@ -9445,7 +9481,7 @@ "name": "infercnv", "version": "1.20.0", "sha256": "1fi89fqzzb9n2c9jchkkgy3yq2fvisjcdavh9r455vmy0xqsyyyd", - "depends": ["ape", "argparse", "BiocGenerics", "caTools", "coda", "coin", "digest", "doParallel", "dplyr", "edgeR", "fastcluster", "fitdistrplus", "foreach", "futile_logger", "future", "ggplot2", "gplots", "gridExtra", "HiddenMarkov", "igraph", "Matrix", "parallelDist", "phyclust", "RANN", "RColorBrewer", "reshape2", "rjags", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "tidyr"] + "depends": ["BiocGenerics", "HiddenMarkov", "Matrix", "RANN", "RColorBrewer", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "ape", "argparse", "caTools", "coda", "coin", "digest", "doParallel", "dplyr", "edgeR", "fastcluster", "fitdistrplus", "foreach", "futile_logger", "future", "ggplot2", "gplots", "gridExtra", "igraph", "parallelDist", "phyclust", "reshape2", "rjags", "tidyr"] }, "infinityFlow": { "name": "infinityFlow", @@ -9457,19 +9493,19 @@ "name": "intansv", "version": "1.44.0", "sha256": "1njvcyk4gdk2bxvs6zbz7dypcbmfismxpv8afxn02i2lz3ykdyzd", - "depends": ["BiocGenerics", "GenomicRanges", "ggbio", "IRanges", "plyr"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "ggbio", "plyr"] }, "interacCircos": { "name": "interacCircos", "version": "1.14.0", "sha256": "084136v9ghzgqgqv3k523416q2wl4qb6ix862fagjgwmkzdmr5s8", - "depends": ["htmlwidgets", "plyr", "RColorBrewer"] + "depends": ["RColorBrewer", "htmlwidgets", "plyr"] }, "interactiveDisplay": { "name": "interactiveDisplay", "version": "1.42.0", "sha256": "14k1j8bmpbrldx61fbvn20f7l2lc50bj9iy01a5jf0ddcbi27x5g", - "depends": ["AnnotationDbi", "BiocGenerics", "Category", "ggplot2", "gridSVG", "interactiveDisplayBase", "plyr", "RColorBrewer", "reshape2", "shiny", "XML"] + "depends": ["AnnotationDbi", "BiocGenerics", "Category", "RColorBrewer", "XML", "ggplot2", "gridSVG", "interactiveDisplayBase", "plyr", "reshape2", "shiny"] }, "interactiveDisplayBase": { "name": "interactiveDisplayBase", @@ -9481,7 +9517,7 @@ "name": "ipdDb", "version": "1.22.0", "sha256": "10pk87w4yd6kgsbg79ci6csmk3izpxc8kwhn5f0jywmjdci7k3nq", - "depends": ["AnnotationDbi", "AnnotationHub", "assertthat", "Biostrings", "DBI", "GenomicRanges", "IRanges", "RSQLite"] + "depends": ["AnnotationDbi", "AnnotationHub", "Biostrings", "DBI", "GenomicRanges", "IRanges", "RSQLite", "assertthat"] }, "isobar": { "name": "isobar", @@ -9493,13 +9529,13 @@ "name": "isomiRs", "version": "1.32.1", "sha256": "020ij0byr9pnzxp083yyjscn3iwv7yq7v2zsdalqs4bzn6z7mzq8", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "broom", "cluster", "cowplot", "DEGreport", "DESeq2", "dplyr", "GenomicRanges", "GGally", "ggplot2", "gplots", "gridExtra", "gtools", "IRanges", "limma", "RColorBrewer", "readr", "reshape", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DEGreport", "DESeq2", "GGally", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "broom", "cluster", "cowplot", "dplyr", "ggplot2", "gplots", "gridExtra", "gtools", "limma", "readr", "reshape", "rlang", "stringr", "tibble", "tidyr"] }, "iterativeBMA": { "name": "iterativeBMA", "version": "1.62.0", "sha256": "1h2nz7pfagd4ncm64b7zfqawp3gd88kvz8920wmk5s732490x522", - "depends": ["Biobase", "BMA", "leaps"] + "depends": ["BMA", "Biobase", "leaps"] }, "iterativeBMAsurv": { "name": "iterativeBMAsurv", @@ -9511,25 +9547,25 @@ "name": "ivygapSE", "version": "1.26.0", "sha256": "00i91a1r3xk7czcv5f7kxppgzjsvalxmzwyqj6mg5m3z4l77m17n", - "depends": ["ggplot2", "hwriter", "plotly", "S4Vectors", "shiny", "SummarizedExperiment", "survival", "survminer", "UpSetR"] + "depends": ["S4Vectors", "SummarizedExperiment", "UpSetR", "ggplot2", "hwriter", "plotly", "shiny", "survival", "survminer"] }, "karyoploteR": { "name": "karyoploteR", "version": "1.30.0", "sha256": "1g4pms5dcr4cdb47gr9kw3mc06v890b38zrsapd4x1cqhgfbgjyg", - "depends": ["AnnotationDbi", "bamsignals", "bezier", "biovizBase", "digest", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "memoise", "regioneR", "Rsamtools", "rtracklayer", "S4Vectors", "VariantAnnotation"] + "depends": ["AnnotationDbi", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "VariantAnnotation", "bamsignals", "bezier", "biovizBase", "digest", "memoise", "regioneR", "rtracklayer"] }, "katdetectr": { "name": "katdetectr", "version": "1.6.0", "sha256": "1hc3795f26cz1xml01zac83gmam15pvxd0pl2i9q4mardnkj9w7s", - "depends": ["Biobase", "BiocParallel", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "changepoint", "changepoint_np", "checkmate", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggtext", "IRanges", "maftools", "plyranges", "Rdpack", "rlang", "S4Vectors", "scales", "tibble", "tidyr", "VariantAnnotation"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "Biobase", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rdpack", "S4Vectors", "VariantAnnotation", "changepoint", "changepoint_np", "checkmate", "dplyr", "ggplot2", "ggtext", "maftools", "plyranges", "rlang", "scales", "tibble", "tidyr"] }, "kebabs": { "name": "kebabs", "version": "1.38.0", "sha256": "0v4sgxvyhi3lzr3jw82w00ffdg0w55vi78ia9i805kqy77sq0677", - "depends": ["apcluster", "Biostrings", "e1071", "IRanges", "kernlab", "LiblineaR", "Matrix", "Rcpp", "S4Vectors", "XVector"] + "depends": ["Biostrings", "IRanges", "LiblineaR", "Matrix", "Rcpp", "S4Vectors", "XVector", "apcluster", "e1071", "kernlab"] }, "keggorthology": { "name": "keggorthology", @@ -9541,13 +9577,13 @@ "name": "kissDE", "version": "1.24.0", "sha256": "1700shil37hsij9h4q3zr2cq3wav9bpbm74d7spbyv0l1fnl8fx9", - "depends": ["ade4", "aods3", "Biobase", "DESeq2", "doParallel", "DSS", "DT", "factoextra", "foreach", "ggplot2", "gplots", "matrixStats", "shiny", "shinycssloaders"] + "depends": ["Biobase", "DESeq2", "DSS", "DT", "ade4", "aods3", "doParallel", "factoextra", "foreach", "ggplot2", "gplots", "matrixStats", "shiny", "shinycssloaders"] }, "knowYourCG": { "name": "knowYourCG", "version": "1.0.0", "sha256": "1nxg81p67d66bzy2fw6dsj02zh33pas02rai1prpsyjs7699bcqf", - "depends": ["dplyr", "GenomicRanges", "IRanges", "reshape2", "rlang", "S4Vectors", "sesameData", "stringr"] + "depends": ["GenomicRanges", "IRanges", "S4Vectors", "dplyr", "reshape2", "rlang", "sesameData", "stringr"] }, "lapmix": { "name": "lapmix", @@ -9559,61 +9595,61 @@ "name": "ldblock", "version": "1.34.0", "sha256": "1l4l35bpz4j1iliy9dj09qq8r4nimd9pcm0gm4g3sb4325z6cd5h", - "depends": ["BiocGenerics", "httr", "Matrix", "rlang"] + "depends": ["BiocGenerics", "Matrix", "httr", "rlang"] }, "lefser": { "name": "lefser", "version": "1.14.0", "sha256": "1qi4q3vijys4q1gfnflvvz8ws3j6f65rpprpgmrkqgiwfn7dvi6g", - "depends": ["coin", "dplyr", "ggplot2", "MASS", "S4Vectors", "SummarizedExperiment"] + "depends": ["MASS", "S4Vectors", "SummarizedExperiment", "coin", "dplyr", "ggplot2"] }, "lemur": { "name": "lemur", "version": "1.2.0", "sha256": "1hwnf8x9prqv96j66i5756510jviibbrchyizalhrlg8f427i5my", - "depends": ["BiocGenerics", "BiocNeighbors", "DelayedMatrixStats", "glmGamPoi", "harmony", "HDF5Array", "irlba", "limma", "Matrix", "MatrixGenerics", "matrixStats", "Rcpp", "RcppArmadillo", "rlang", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "vctrs"] + "depends": ["BiocGenerics", "BiocNeighbors", "DelayedMatrixStats", "HDF5Array", "Matrix", "MatrixGenerics", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "glmGamPoi", "harmony", "irlba", "limma", "matrixStats", "rlang", "vctrs"] }, "les": { "name": "les", "version": "1.54.0", "sha256": "1dsdrdv06ab7rxpvmbgq1b6dhajjaw7zgvi9nshadm5gg28i60x3", - "depends": ["boot", "fdrtool", "gplots", "RColorBrewer"] + "depends": ["RColorBrewer", "boot", "fdrtool", "gplots"] }, "levi": { "name": "levi", "version": "1.22.0", "sha256": "0rknsfa5fbr4smxzj4p589sxxbypb2s1wvn33p9qj69mfcx7rmi3", - "depends": ["colorspace", "dplyr", "DT", "ggplot2", "httr", "igraph", "knitr", "RColorBrewer", "Rcpp", "reshape2", "rmarkdown", "shiny", "shinydashboard", "shinyjs", "testthat", "xml2"] + "depends": ["DT", "RColorBrewer", "Rcpp", "colorspace", "dplyr", "ggplot2", "httr", "igraph", "knitr", "reshape2", "rmarkdown", "shiny", "shinydashboard", "shinyjs", "testthat", "xml2"] }, "lfa": { "name": "lfa", "version": "2.4.0", "sha256": "1sbgr6h2kpfpzw3fkqd1075wrmbblb97pdywmvl8xv52vg0wqxz3", - "depends": ["corpcor", "RSpectra"] + "depends": ["RSpectra", "corpcor"] }, "limma": { "name": "limma", - "version": "3.60.2", - "sha256": "154fsg8vnks38f9phlbf15cpsf84p2gwygqgq4ayddfpxczzl159", + "version": "3.60.4", + "sha256": "123z062fc0qf43zplmw5svzpdmpgxagyl1gi1bxa34426s1hfv6m", "depends": ["statmod"] }, "limmaGUI": { "name": "limmaGUI", "version": "1.80.0", "sha256": "12ryq8l3jkxi5znzhb9bqp53sba7rk2fszsxp1dkwmyrdl12l4ns", - "depends": ["limma", "R2HTML", "tkrplot", "xtable"] + "depends": ["R2HTML", "limma", "tkrplot", "xtable"] }, "limpca": { "name": "limpca", "version": "1.0.0", "sha256": "1id38g2s7g0shcqz37i03zhhypilny8z2dwf74anj8yj4d1isdfr", - "depends": ["doParallel", "dplyr", "ggplot2", "ggrepel", "ggsci", "plyr", "reshape2", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyverse"] + "depends": ["S4Vectors", "SummarizedExperiment", "doParallel", "dplyr", "ggplot2", "ggrepel", "ggsci", "plyr", "reshape2", "stringr", "tibble", "tidyr", "tidyverse"] }, "lineagespot": { "name": "lineagespot", "version": "1.8.0", "sha256": "0rjf4liq6lr6i3b2a0cn22qc1xisscsvn7zi11vq8wq0ym15pj6c", - "depends": ["data_table", "httr", "MatrixGenerics", "stringr", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["MatrixGenerics", "SummarizedExperiment", "VariantAnnotation", "data_table", "httr", "stringr"] }, "lionessR": { "name": "lionessR", @@ -9625,13 +9661,13 @@ "name": "lipidr", "version": "2.18.0", "sha256": "037xy9ci3h0913df5iy5xnciz26zr9frqfpk8krbx7qfzk4d0rk2", - "depends": ["data_table", "dplyr", "fgsea", "forcats", "ggplot2", "imputeLCMD", "limma", "magrittr", "rlang", "ropls", "S4Vectors", "SummarizedExperiment", "tidyr"] + "depends": ["S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "fgsea", "forcats", "ggplot2", "imputeLCMD", "limma", "magrittr", "rlang", "ropls", "tidyr"] }, "lisaClust": { "name": "lisaClust", - "version": "1.12.1", - "sha256": "1yagv5c398kk95c8gyny7ldhh7mpf1yrqp65ijk0xgx5xpl3kcfd", - "depends": ["BiocGenerics", "BiocParallel", "class", "concaveman", "data_table", "dplyr", "ggplot2", "pheatmap", "purrr", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "spatstat_explore", "spatstat_geom", "spatstat_random", "spicyR", "SummarizedExperiment", "tidyr"] + "version": "1.12.3", + "sha256": "19zb7h7k6yn2hjq204w49kz97r2fhflnw87b6qsmavhrpva6g9a1", + "depends": ["BiocGenerics", "BiocParallel", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "class", "concaveman", "data_table", "dplyr", "ggplot2", "pheatmap", "purrr", "spatstat_explore", "spatstat_geom", "spatstat_random", "spicyR", "tidyr"] }, "lmdme": { "name": "lmdme", @@ -9643,7 +9679,7 @@ "name": "loci2path", "version": "1.24.0", "sha256": "0igamscdyblh7ymj62qimwr48qfvpqld4ami0m3bnlzkkds6xm2n", - "depends": ["BiocParallel", "data_table", "GenomicRanges", "pheatmap", "RColorBrewer", "S4Vectors", "wordcloud"] + "depends": ["BiocParallel", "GenomicRanges", "RColorBrewer", "S4Vectors", "data_table", "pheatmap", "wordcloud"] }, "logicFS": { "name": "logicFS", @@ -9667,19 +9703,19 @@ "name": "lumi", "version": "2.56.0", "sha256": "04r7dw00yvjrxs0h6mwh79lwp55f5v8s4pgmzcy2fnpb2cdslpzy", - "depends": ["affy", "annotate", "AnnotationDbi", "Biobase", "DBI", "GenomicFeatures", "GenomicRanges", "KernSmooth", "lattice", "MASS", "methylumi", "mgcv", "nleqslv", "preprocessCore", "RSQLite"] + "depends": ["AnnotationDbi", "Biobase", "DBI", "GenomicFeatures", "GenomicRanges", "KernSmooth", "MASS", "RSQLite", "affy", "annotate", "lattice", "methylumi", "mgcv", "nleqslv", "preprocessCore"] }, "lute": { "name": "lute", "version": "1.0.0", "sha256": "02hqwxmqld3fkvs7c7l8hz39wksxgbcnckgvkzgpaknsb2fdmml0", - "depends": ["Biobase", "BiocGenerics", "dplyr", "ggplot2", "S4Vectors", "scran", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "scran"] }, "m6Aboost": { "name": "m6Aboost", "version": "1.10.0", "sha256": "141jrx1ngwb70pl769ablzvxcd4f4dfgzi0jdsmqgmhb3kb3qvg2", - "depends": ["adabag", "Biostrings", "BSgenome", "dplyr", "ExperimentHub", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "Biostrings", "ExperimentHub", "GenomicRanges", "IRanges", "S4Vectors", "adabag", "dplyr", "rtracklayer"] }, "mBPCR": { "name": "mBPCR", @@ -9691,7 +9727,7 @@ "name": "mCSEA", "version": "1.24.0", "sha256": "11mx1250kvdmkriznzp0a05jvf9paizj7qsgq7wzlvgz9f6nfwyw", - "depends": ["biomaRt", "fgsea", "GenomicFeatures", "GenomicRanges", "ggplot2", "Gviz", "Homo_sapiens", "IRanges", "limma", "mCSEAdata", "S4Vectors", "SummarizedExperiment"] + "depends": ["GenomicFeatures", "GenomicRanges", "Gviz", "Homo_sapiens", "IRanges", "S4Vectors", "SummarizedExperiment", "biomaRt", "fgsea", "ggplot2", "limma", "mCSEAdata"] }, "maCorrPlot": { "name": "maCorrPlot", @@ -9703,7 +9739,7 @@ "name": "maPredictDSC", "version": "1.42.0", "sha256": "015zp1ijl4sjqvrnaf0fzwzynvwjgphxba4q29m821hyvq1rjmx4", - "depends": ["affy", "AnnotationDbi", "caret", "class", "e1071", "gcrma", "hgu133plus2_db", "limma", "LungCancerACvsSCCGEO", "MASS", "ROC", "ROCR"] + "depends": ["AnnotationDbi", "LungCancerACvsSCCGEO", "MASS", "ROC", "ROCR", "affy", "caret", "class", "e1071", "gcrma", "hgu133plus2_db", "limma"] }, "maSigPro": { "name": "maSigPro", @@ -9715,19 +9751,19 @@ "name": "made4", "version": "1.78.0", "sha256": "0x96lhkz0fwp3qis8k2lllmi520b887bz26jcq3zlk1kjhbg91a8", - "depends": ["ade4", "Biobase", "gplots", "RColorBrewer", "scatterplot3d", "SummarizedExperiment"] + "depends": ["Biobase", "RColorBrewer", "SummarizedExperiment", "ade4", "gplots", "scatterplot3d"] }, "maftools": { "name": "maftools", "version": "2.20.0", "sha256": "0c2sf8l1wfgz3nh9ccm10y9wwh7rv55r09awavqlrr9glcbblp32", - "depends": ["data_table", "DNAcopy", "RColorBrewer", "Rhtslib", "survival", "zlibbioc"] + "depends": ["DNAcopy", "RColorBrewer", "Rhtslib", "data_table", "survival", "zlibbioc"] }, "magpie": { "name": "magpie", "version": "1.4.0", "sha256": "1m5xnbcyhglkg843fhfvynlinag8vv8sxg1ghzpwi0q9ki65kq9d", - "depends": ["AnnotationDbi", "aod", "BiocParallel", "DESeq2", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "matrixStats", "openxlsx", "RColorBrewer", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors", "TRESS"] + "depends": ["AnnotationDbi", "BiocParallel", "DESeq2", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "RColorBrewer", "Rsamtools", "S4Vectors", "TRESS", "aod", "matrixStats", "openxlsx", "reshape2", "rtracklayer"] }, "magrene": { "name": "magrene", @@ -9739,7 +9775,7 @@ "name": "makecdfenv", "version": "1.80.0", "sha256": "0c1ks5f2rc0mwbfji6iicvypbmm46mq8yckmdpwiyp22l7l05aqz", - "depends": ["affy", "affyio", "Biobase", "zlibbioc"] + "depends": ["Biobase", "affy", "affyio", "zlibbioc"] }, "mapscape": { "name": "mapscape", @@ -9751,13 +9787,13 @@ "name": "mariner", "version": "1.4.0", "sha256": "1ndinmzzzpy154jmndnqf5xj3wz35jjijszg88ga4j19w2cxmnfp", - "depends": ["abind", "assertthat", "BiocGenerics", "BiocManager", "BiocParallel", "colourvalues", "data_table", "dbscan", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "glue", "HDF5Array", "InteractionSet", "IRanges", "magrittr", "plotgardener", "plyranges", "progress", "purrr", "RColorBrewer", "rhdf5", "rlang", "S4Vectors", "strawr", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocManager", "BiocParallel", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "InteractionSet", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "abind", "assertthat", "colourvalues", "data_table", "dbscan", "glue", "magrittr", "plotgardener", "plyranges", "progress", "purrr", "rhdf5", "rlang", "strawr"] }, "marr": { "name": "marr", "version": "1.14.0", "sha256": "1670fr6fcclrhgz6aqg0ph9iln0vjq3zgyp215na07ngwrzjw5nb", - "depends": ["dplyr", "ggplot2", "magrittr", "Rcpp", "rlang", "S4Vectors", "SummarizedExperiment"] + "depends": ["Rcpp", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "magrittr", "rlang"] }, "marray": { "name": "marray", @@ -9769,13 +9805,13 @@ "name": "martini", "version": "1.24.0", "sha256": "07d1cyj2ms8mnglqzqs45gz32pdsqkfac00a118fahs1rw8j408f", - "depends": ["igraph", "Matrix", "memoise", "Rcpp", "RcppEigen", "snpStats"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "igraph", "memoise", "snpStats"] }, "maser": { "name": "maser", "version": "1.22.0", "sha256": "0w62dl65ysgcwixgmmb70qp6f85vhfnqjsww5snkjd48ypwx65ca", - "depends": ["BiocGenerics", "data_table", "dplyr", "DT", "GenomeInfoDb", "GenomicRanges", "ggplot2", "Gviz", "IRanges", "reshape2", "rtracklayer"] + "depends": ["BiocGenerics", "DT", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "data_table", "dplyr", "ggplot2", "reshape2", "rtracklayer"] }, "maskBAD": { "name": "maskBAD", @@ -9793,7 +9829,7 @@ "name": "mastR", "version": "1.4.0", "sha256": "1717hyil3x4c6jqv4zv6fwppwq1lc74kd8hg8z8yj8qqp92093f8", - "depends": ["AnnotationDbi", "Biobase", "dplyr", "edgeR", "ggplot2", "ggpubr", "GSEABase", "limma", "Matrix", "msigdb", "org_Hs_eg_db", "patchwork", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "tidyr"] + "depends": ["AnnotationDbi", "Biobase", "GSEABase", "Matrix", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "edgeR", "ggplot2", "ggpubr", "limma", "msigdb", "org_Hs_eg_db", "patchwork", "tidyr"] }, "matchBox": { "name": "matchBox", @@ -9803,21 +9839,21 @@ }, "matter": { "name": "matter", - "version": "2.6.2", - "sha256": "06ql73amrl5zy3ldm4ni3vwv65j1v9fy5s7a2pvwi31w4nwdly6h", - "depends": ["biglm", "BiocGenerics", "BiocParallel", "digest", "irlba", "Matrix", "ProtGenerics"] + "version": "2.6.3", + "sha256": "17903fjwxa77llwcf1r783ca3nh10l4lpxd2q65s1jnvk9sjcn65", + "depends": ["BiocGenerics", "BiocParallel", "Matrix", "ProtGenerics", "biglm", "digest", "irlba"] }, "mbQTL": { "name": "mbQTL", "version": "1.4.0", "sha256": "04ml4rv1hngr8lm9z9pcg7szb1cmla1m1vypwjk9bkkfy879ribf", - "depends": ["broom", "dplyr", "ggplot2", "MatrixEQTL", "metagenomeSeq", "pheatmap", "readxl", "stringr", "tidyr"] + "depends": ["MatrixEQTL", "broom", "dplyr", "ggplot2", "metagenomeSeq", "pheatmap", "readxl", "stringr", "tidyr"] }, "mbkmeans": { "name": "mbkmeans", "version": "1.20.0", "sha256": "0fnf6ymbcfchhlcbwpwlcq1jc3lfzh9f8mf76xfy7vrpwngds1fs", - "depends": ["beachmat", "benchmarkme", "BiocParallel", "ClusterR", "DelayedArray", "Matrix", "Rcpp", "RcppArmadillo", "Rhdf5lib", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "ClusterR", "DelayedArray", "Matrix", "Rcpp", "RcppArmadillo", "Rhdf5lib", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "beachmat", "benchmarkme"] }, "mdp": { "name": "mdp", @@ -9829,37 +9865,37 @@ "name": "mdqc", "version": "1.66.0", "sha256": "1frn6s43j6sbwnb5h2hykccvi7cwbasp8l37rc3nkxpc6szvsby6", - "depends": ["cluster", "MASS"] + "depends": ["MASS", "cluster"] }, "megadepth": { "name": "megadepth", "version": "1.14.0", "sha256": "0394x1x81hgibvqb1dbrm8h3y72xfv9xi9fgqghjgnrw6farrkdk", - "depends": ["cmdfun", "dplyr", "fs", "GenomicRanges", "magrittr", "readr", "xfun"] + "depends": ["GenomicRanges", "cmdfun", "dplyr", "fs", "magrittr", "readr", "xfun"] }, "memes": { "name": "memes", "version": "1.12.0", "sha256": "03hrhydlgk57z9hzmwdgihlhsjyhhzw5vb5ql07ks169z15nix4h", - "depends": ["Biostrings", "cmdfun", "dplyr", "GenomicRanges", "ggplot2", "ggseqlogo", "magrittr", "matrixStats", "patchwork", "processx", "purrr", "readr", "rlang", "tibble", "tidyr", "universalmotif", "usethis", "xml2"] + "depends": ["Biostrings", "GenomicRanges", "cmdfun", "dplyr", "ggplot2", "ggseqlogo", "magrittr", "matrixStats", "patchwork", "processx", "purrr", "readr", "rlang", "tibble", "tidyr", "universalmotif", "usethis", "xml2"] }, "meshes": { "name": "meshes", "version": "1.30.0", "sha256": "0yc1drx7rbaxasj9p05hn4wa1nz0frymv7i9aw55ma59jjik8gi6", - "depends": ["AnnotationDbi", "AnnotationHub", "DOSE", "enrichplot", "GOSemSim", "MeSHDbi", "yulab_utils"] + "depends": ["AnnotationDbi", "AnnotationHub", "DOSE", "GOSemSim", "MeSHDbi", "enrichplot", "yulab_utils"] }, "meshr": { "name": "meshr", "version": "2.10.0", "sha256": "1cbxlypw937bafmzlz8v0g1bf16pmlqdc1jkisj8zmaj9xabbik9", - "depends": ["BiocGenerics", "BiocStyle", "Category", "fdrtool", "knitr", "markdown", "MeSHDbi", "rmarkdown", "RSQLite", "S4Vectors"] + "depends": ["BiocGenerics", "BiocStyle", "Category", "MeSHDbi", "RSQLite", "S4Vectors", "fdrtool", "knitr", "markdown", "rmarkdown"] }, "messina": { "name": "messina", "version": "1.40.0", "sha256": "0xcc5y4zqz0hn7bm0lgyb8dlnhhq5nz1pghq53lvdmgr5zcp8yqz", - "depends": ["foreach", "ggplot2", "plyr", "Rcpp", "survival"] + "depends": ["Rcpp", "foreach", "ggplot2", "plyr", "survival"] }, "metaCCA": { "name": "metaCCA", @@ -9883,7 +9919,7 @@ "name": "metabCombiner", "version": "1.14.0", "sha256": "0jp39qz7z3v7ndnxhc4lsjwf1mfhjq5nsg926s1x1i7w5x203fzd", - "depends": ["caret", "dplyr", "matrixStats", "mgcv", "rlang", "S4Vectors", "tidyr"] + "depends": ["S4Vectors", "caret", "dplyr", "matrixStats", "mgcv", "rlang", "tidyr"] }, "metabinR": { "name": "metabinR", @@ -9893,9 +9929,9 @@ }, "metabolomicsWorkbenchR": { "name": "metabolomicsWorkbenchR", - "version": "1.14.0", - "sha256": "0rsrla3gyh0fpx49kg0p5c02nskcl5rv7xmdnbgxk5d1kbzdsrcr", - "depends": ["data_table", "httr", "jsonlite", "MultiAssayExperiment", "struct", "SummarizedExperiment"] + "version": "1.14.2", + "sha256": "1aj3b9zpnvmb0h5bbmd7nsvfg50a834nwrgvqw6707ncyw1p7vgi", + "depends": ["MultiAssayExperiment", "SummarizedExperiment", "data_table", "httr", "jsonlite", "struct"] }, "metabomxtr": { "name": "metabomxtr", @@ -9907,13 +9943,13 @@ "name": "metagene2", "version": "1.20.0", "sha256": "1j5jl0xczj2g03k0lwq9h5snv4kpwqga836dkshnmf789gn2pzy3", - "depends": ["BiocParallel", "data_table", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "purrr", "R6", "reshape2", "Rsamtools", "rtracklayer"] + "depends": ["BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "R6", "Rsamtools", "data_table", "dplyr", "ggplot2", "magrittr", "purrr", "reshape2", "rtracklayer"] }, "metagenomeSeq": { "name": "metagenomeSeq", "version": "1.46.0", "sha256": "0bjbiwbgs0lv0j6gjv5rhqhmqk0p7f80lfig4n24i4bqwkd2j26k", - "depends": ["Biobase", "foreach", "glmnet", "gplots", "limma", "Matrix", "matrixStats", "RColorBrewer", "Wrench"] + "depends": ["Biobase", "Matrix", "RColorBrewer", "Wrench", "foreach", "glmnet", "gplots", "limma", "matrixStats"] }, "metahdep": { "name": "metahdep", @@ -9937,61 +9973,61 @@ "name": "metaseqR2", "version": "1.16.0", "sha256": "1rkaacb0jkfzhdd7q7v38by7wwmk4m4kfa01ky8yn2fady0sx3hm", - "depends": ["ABSSeq", "Biobase", "BiocGenerics", "BiocParallel", "biomaRt", "Biostrings", "corrplot", "DESeq2", "DSS", "DT", "EDASeq", "edgeR", "genefilter", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "gplots", "harmonicmeanp", "heatmaply", "htmltools", "httr", "IRanges", "jsonlite", "lattice", "limma", "locfit", "log4r", "magrittr", "MASS", "Matrix", "NBPSeq", "pander", "qvalue", "rmarkdown", "rmdformats", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "stringr", "SummarizedExperiment", "survcomp", "txdbmaker", "VennDiagram", "vsn", "yaml", "zoo"] + "depends": ["ABSSeq", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DESeq2", "DSS", "DT", "EDASeq", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "MASS", "Matrix", "NBPSeq", "RSQLite", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VennDiagram", "biomaRt", "corrplot", "edgeR", "genefilter", "gplots", "harmonicmeanp", "heatmaply", "htmltools", "httr", "jsonlite", "lattice", "limma", "locfit", "log4r", "magrittr", "pander", "qvalue", "rmarkdown", "rmdformats", "rtracklayer", "stringr", "survcomp", "txdbmaker", "vsn", "yaml", "zoo"] }, "methInheritSim": { "name": "methInheritSim", "version": "1.26.0", "sha256": "0c94sbqa0aiskrl8rxyiyj38a5n4vw1l2b51c2v0ryvjqk0zg93n", - "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "methylKit", "msm", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "methylKit", "msm"] }, "methimpute": { "name": "methimpute", "version": "1.26.0", "sha256": "1k9nasdfvrynvk2jsvxpbbp9zdqh516c41m654yfsdi5cl2y3jyd", - "depends": ["Biostrings", "data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "minpack_lm", "Rcpp", "reshape2"] + "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "data_table", "ggplot2", "minpack_lm", "reshape2"] }, "methodical": { "name": "methodical", "version": "1.0.0", "sha256": "13m75hf5dq36l20idp9alcikhhqa2qy5jwfnpkv2yp1ra6c9pq7j", - "depends": ["BiocParallel", "Biostrings", "BSgenome", "cowplot", "data_table", "DelayedArray", "dplyr", "ExperimentHub", "foreach", "GenomeInfoDb", "GenomicRanges", "ggplot2", "HDF5Array", "IRanges", "R_utils", "RcppRoll", "rhdf5", "rtracklayer", "S4Vectors", "scales", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["BSgenome", "BiocParallel", "Biostrings", "DelayedArray", "ExperimentHub", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "R_utils", "RcppRoll", "S4Vectors", "SummarizedExperiment", "cowplot", "data_table", "dplyr", "foreach", "ggplot2", "rhdf5", "rtracklayer", "scales", "tibble", "tidyr"] }, "methrix": { "name": "methrix", "version": "1.18.0", "sha256": "0976y3aswyv7dk60ix9vvcvd6dgc0sy8qnakq3pdrl505znxsshi", - "depends": ["BSgenome", "data_table", "DelayedArray", "DelayedMatrixStats", "GenomicRanges", "ggplot2", "HDF5Array", "IRanges", "matrixStats", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BSgenome", "DelayedArray", "DelayedMatrixStats", "GenomicRanges", "HDF5Array", "IRanges", "S4Vectors", "SummarizedExperiment", "data_table", "ggplot2", "matrixStats", "rtracklayer"] }, "methyLImp2": { "name": "methyLImp2", "version": "1.0.0", "sha256": "1f86951l7gjqj48hxdm6ppc7bp84dm9fnlh0xhhl12fbdp2id94m", - "depends": ["BiocParallel", "ChAMPdata", "corpcor", "SummarizedExperiment"] + "depends": ["BiocParallel", "ChAMPdata", "SummarizedExperiment", "corpcor"] }, "methylCC": { "name": "methylCC", "version": "1.18.0", "sha256": "16i4yjx36pdbxf9vqnnr568lqcnql1pw3f5f1hlnq66kaai9hx34", - "depends": ["Biobase", "bsseq", "bumphunter", "dplyr", "FlowSorted_Blood_450k", "genefilter", "GenomicRanges", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "IRanges", "magrittr", "minfi", "plyranges", "quadprog", "S4Vectors"] + "depends": ["Biobase", "FlowSorted_Blood_450k", "GenomicRanges", "IRanges", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "S4Vectors", "bsseq", "bumphunter", "dplyr", "genefilter", "magrittr", "minfi", "plyranges", "quadprog"] }, "methylGSA": { "name": "methylGSA", "version": "1.22.0", "sha256": "0myii2c782my1lmqziaxdlrsfxgh194n58m1ydaqbxnhgkwvh10s", - "depends": ["AnnotationDbi", "BiocParallel", "clusterProfiler", "ggplot2", "GO_db", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "missMethyl", "org_Hs_eg_db", "reactome_db", "RobustRankAggreg", "shiny", "stringr"] + "depends": ["AnnotationDbi", "BiocParallel", "GO_db", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "RobustRankAggreg", "clusterProfiler", "ggplot2", "missMethyl", "org_Hs_eg_db", "reactome_db", "shiny", "stringr"] }, "methylInheritance": { "name": "methylInheritance", "version": "1.28.0", "sha256": "1pqd9ydgm071pa5lld1mn39yymkaghzx931ghlkshhh9dsrjqhg4", - "depends": ["BiocParallel", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "methylKit", "rebus", "S4Vectors"] + "depends": ["BiocParallel", "GenomicRanges", "IRanges", "S4Vectors", "ggplot2", "gridExtra", "methylKit", "rebus"] }, "methylKit": { "name": "methylKit", "version": "1.30.0", "sha256": "000dvi63cjikjbq3q83hlspd7y62rpswzg6hs5z1z1pj6a8rifdj", - "depends": ["data_table", "emdbook", "fastseg", "GenomeInfoDb", "GenomicRanges", "gtools", "IRanges", "KernSmooth", "limma", "mclust", "mgcv", "qvalue", "R_utils", "Rcpp", "Rhtslib", "Rsamtools", "rtracklayer", "S4Vectors", "zlibbioc"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "KernSmooth", "R_utils", "Rcpp", "Rhtslib", "Rsamtools", "S4Vectors", "data_table", "emdbook", "fastseg", "gtools", "limma", "mclust", "mgcv", "qvalue", "rtracklayer", "zlibbioc"] }, "methylMnM": { "name": "methylMnM", @@ -10003,37 +10039,37 @@ "name": "methylPipe", "version": "1.38.0", "sha256": "1v2qp5rp19d80aai8i5y32b62kynkkdkp3hqfvsk82ckwxvk2k60", - "depends": ["BiocGenerics", "Biostrings", "data_table", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "gplots", "Gviz", "IRanges", "marray", "Rsamtools", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "Gviz", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "data_table", "gplots", "marray"] }, "methylSig": { "name": "methylSig", "version": "1.16.0", "sha256": "03ghyx1xj2d06fj5kckrw810x92s8ndsq3wpj1kcjkf1v22vr0ln", - "depends": ["bsseq", "DelayedArray", "DelayedMatrixStats", "DSS", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors"] + "depends": ["DSS", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "bsseq"] }, "methylclock": { "name": "methylclock", "version": "1.10.0", "sha256": "193ck7a501804424yqvg2c8zixzj56p3d8468sdisx577hhshhhm", - "depends": ["Biobase", "devtools", "dplyr", "dynamicTreeCut", "ExperimentHub", "ggplot2", "ggpmisc", "ggpubr", "gridExtra", "impute", "methylclockData", "minfi", "PerformanceAnalytics", "planet", "preprocessCore", "quadprog", "Rcpp", "RPMM", "tibble", "tidyr", "tidyverse"] + "depends": ["Biobase", "ExperimentHub", "PerformanceAnalytics", "RPMM", "Rcpp", "devtools", "dplyr", "dynamicTreeCut", "ggplot2", "ggpmisc", "ggpubr", "gridExtra", "impute", "methylclockData", "minfi", "planet", "preprocessCore", "quadprog", "tibble", "tidyr", "tidyverse"] }, "methylscaper": { "name": "methylscaper", "version": "1.12.0", "sha256": "19xpagmx9rn840acbm2cj3vkvhjzr1rslsjmjgvgcm4fip1yrskp", - "depends": ["BiocParallel", "Biostrings", "data_table", "pwalign", "Rfast", "seqinr", "seriation", "shiny", "shinyFiles", "shinyjs", "SummarizedExperiment"] + "depends": ["BiocParallel", "Biostrings", "Rfast", "SummarizedExperiment", "data_table", "pwalign", "seqinr", "seriation", "shiny", "shinyFiles", "shinyjs"] }, "methylumi": { "name": "methylumi", "version": "2.50.0", "sha256": "1ms3w43yvy810mr6dml9hqp3kw5jlpr9153kd62gvhjsgikaj3ja", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "FDb_InfiniumMethylation_hg19", "genefilter", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "illuminaio", "IRanges", "lattice", "matrixStats", "minfi", "reshape2", "S4Vectors", "scales", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "FDb_InfiniumMethylation_hg19", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "annotate", "genefilter", "ggplot2", "illuminaio", "lattice", "matrixStats", "minfi", "reshape2", "scales"] }, "mfa": { "name": "mfa", "version": "1.26.0", "sha256": "1vqmpxsl9dfq0h9cirip578crfnqxpabbwpzlglcm0qqwymh6ilr", - "depends": ["Biobase", "coda", "dplyr", "ggmcmc", "ggplot2", "magrittr", "MCMCglmm", "MCMCpack", "Rcpp", "tibble"] + "depends": ["Biobase", "MCMCglmm", "MCMCpack", "Rcpp", "coda", "dplyr", "ggmcmc", "ggplot2", "magrittr", "tibble"] }, "mgsa": { "name": "mgsa", @@ -10045,13 +10081,13 @@ "name": "miQC", "version": "1.12.0", "sha256": "04f7jza631y04mhy23yvipd88rywgpqw5jm9ff54hhfhmscdaczn", - "depends": ["flexmix", "ggplot2", "SingleCellExperiment"] + "depends": ["SingleCellExperiment", "flexmix", "ggplot2"] }, "miRLAB": { "name": "miRLAB", "version": "1.34.0", "sha256": "1r18s6d94csqqbkjis5dh5q4rbw1qvj61x8wmzw7jgyvrsyd5jqc", - "depends": ["Category", "ctc", "dplyr", "energy", "entropy", "glmnet", "GOstats", "gplots", "Hmisc", "httr", "impute", "InvariantCausalPrediction", "limma", "org_Hs_eg_db", "pcalg", "RCurl", "stringr", "SummarizedExperiment", "TCGAbiolinks"] + "depends": ["Category", "GOstats", "Hmisc", "InvariantCausalPrediction", "RCurl", "SummarizedExperiment", "TCGAbiolinks", "ctc", "dplyr", "energy", "entropy", "glmnet", "gplots", "httr", "impute", "limma", "org_Hs_eg_db", "pcalg", "stringr"] }, "miRNAmeConverter": { "name": "miRNAmeConverter", @@ -10069,13 +10105,13 @@ "name": "miRNAtap", "version": "1.38.0", "sha256": "07sff3h9hidw5xr11fx6n4ngajvsvbz4a1gkavd32wh6j8jccpyx", - "depends": ["AnnotationDbi", "DBI", "plyr", "RSQLite", "sqldf", "stringr"] + "depends": ["AnnotationDbi", "DBI", "RSQLite", "plyr", "sqldf", "stringr"] }, "miRSM": { "name": "miRSM", "version": "2.0.0", "sha256": "0wxwz00fsv8jf291zlfjim89vhsbqwlc9klq0szzl1p7msrs7vga", - "depends": ["BiBitR", "BicARE", "biclust", "Biobase", "clusterProfiler", "dbscan", "DOSE", "dynamicTreeCut", "energy", "fabia", "flashClust", "GFA", "GSEABase", "iBBiG", "igraph", "isa2", "linkcomm", "MatrixCorrelation", "MCL", "mclust", "NMF", "org_Hs_eg_db", "PMA", "ppclust", "Rcpp", "ReactomePA", "rqubic", "s4vd", "SOMbrero", "subspace", "SummarizedExperiment", "WGCNA"] + "depends": ["BiBitR", "BicARE", "Biobase", "DOSE", "GFA", "GSEABase", "MCL", "MatrixCorrelation", "NMF", "PMA", "Rcpp", "ReactomePA", "SOMbrero", "SummarizedExperiment", "WGCNA", "biclust", "clusterProfiler", "dbscan", "dynamicTreeCut", "energy", "fabia", "flashClust", "iBBiG", "igraph", "isa2", "linkcomm", "mclust", "org_Hs_eg_db", "ppclust", "rqubic", "s4vd", "subspace"] }, "miRcomp": { "name": "miRcomp", @@ -10083,23 +10119,29 @@ "sha256": "1gm8s0mprb5ybc1hb92w1z84qrj4vzfizd0ws4ppzj9k6fb12nn9", "depends": ["Biobase", "KernSmooth", "miRcompData"] }, + "miRspongeR": { + "name": "miRspongeR", + "version": "2.8.0", + "sha256": "0i7j33lwj5kw09dla7967f5z8zp8ls25db432m0ch2n8ialz0anc", + "depends": ["DOSE", "MCL", "Rcpp", "ReactomePA", "SPONGE", "clusterProfiler", "corpcor", "doParallel", "foreach", "igraph", "linkcomm", "org_Hs_eg_db", "survival"] + }, "mia": { "name": "mia", "version": "1.12.0", "sha256": "1wn2lb7hn4zqqcs2jwavpsbk5kw8d78kxg2yv4jjpikpdz7haa2i", - "depends": ["ape", "BiocGenerics", "BiocParallel", "Biostrings", "bluster", "DECIPHER", "decontam", "DelayedArray", "DelayedMatrixStats", "DirichletMultinomial", "dplyr", "IRanges", "MASS", "MatrixGenerics", "MultiAssayExperiment", "rlang", "S4Vectors", "scater", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidyr", "TreeSummarizedExperiment", "vegan"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "DECIPHER", "DelayedArray", "DelayedMatrixStats", "DirichletMultinomial", "IRanges", "MASS", "MatrixGenerics", "MultiAssayExperiment", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TreeSummarizedExperiment", "ape", "bluster", "decontam", "dplyr", "rlang", "scater", "scuttle", "tibble", "tidyr", "vegan"] }, "miaSim": { "name": "miaSim", "version": "1.10.0", "sha256": "1grlkynbjkfndx8j44yd6sfr3yzy0fwmakjw4mg8flllqs9yqnmw", - "depends": ["deSolve", "MatrixGenerics", "poweRlaw", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment"] + "depends": ["MatrixGenerics", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "deSolve", "poweRlaw"] }, "miaViz": { "name": "miaViz", "version": "1.12.0", "sha256": "1dpvqvh9sg6visf4bbjd9x4wag2dzj2b5mylbxbqwcm8lic7gy03", - "depends": ["ape", "BiocGenerics", "BiocParallel", "DelayedArray", "DirichletMultinomial", "dplyr", "ggnewscale", "ggplot2", "ggraph", "ggrepel", "ggtree", "mia", "purrr", "rlang", "S4Vectors", "scater", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidygraph", "tidyr", "tidytree", "TreeSummarizedExperiment", "viridis"] + "depends": ["BiocGenerics", "BiocParallel", "DelayedArray", "DirichletMultinomial", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TreeSummarizedExperiment", "ape", "dplyr", "ggnewscale", "ggplot2", "ggraph", "ggrepel", "ggtree", "mia", "purrr", "rlang", "scater", "tibble", "tidygraph", "tidyr", "tidytree", "viridis"] }, "microRNA": { "name": "microRNA", @@ -10111,55 +10153,55 @@ "name": "microSTASIS", "version": "1.4.0", "sha256": "1gf37nqcif6blpwrlq694gl78l2g1alx13wjdxay6qfg2iaf2dln", - "depends": ["BiocParallel", "ggplot2", "ggside", "rlang", "stringr", "TreeSummarizedExperiment"] + "depends": ["BiocParallel", "TreeSummarizedExperiment", "ggplot2", "ggside", "rlang", "stringr"] }, "microbiome": { "name": "microbiome", "version": "1.26.0", "sha256": "1azxfydcrxi46j6lykspzchwcj0dpghjia7vfb2bppz9gh8nvk37", - "depends": ["Biostrings", "compositions", "dplyr", "ggplot2", "phyloseq", "reshape2", "Rtsne", "scales", "tibble", "tidyr", "vegan"] + "depends": ["Biostrings", "Rtsne", "compositions", "dplyr", "ggplot2", "phyloseq", "reshape2", "scales", "tibble", "tidyr", "vegan"] }, "microbiomeDASim": { "name": "microbiomeDASim", "version": "1.18.0", "sha256": "123viwwyc4yjwkc1l7r9als4bvi2sb7yxmyfidqwamw8f2vwsfcz", - "depends": ["Biobase", "ggplot2", "MASS", "Matrix", "metagenomeSeq", "mvtnorm", "pbapply", "phyloseq", "tmvtnorm"] + "depends": ["Biobase", "MASS", "Matrix", "ggplot2", "metagenomeSeq", "mvtnorm", "pbapply", "phyloseq", "tmvtnorm"] }, "microbiomeExplorer": { "name": "microbiomeExplorer", "version": "1.14.0", "sha256": "0p15wp3n2v74rfsmap0331b3xkswfyaq8a4h2xrcn3v60m5qfmzq", - "depends": ["Biobase", "biomformat", "broom", "car", "DESeq2", "dplyr", "DT", "forcats", "heatmaply", "knitr", "limma", "lubridate", "magrittr", "matrixStats", "metagenomeSeq", "plotly", "purrr", "RColorBrewer", "readr", "reshape2", "rlang", "rmarkdown", "shiny", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "stringr", "tibble", "tidyr", "vegan"] + "depends": ["Biobase", "DESeq2", "DT", "RColorBrewer", "biomformat", "broom", "car", "dplyr", "forcats", "heatmaply", "knitr", "limma", "lubridate", "magrittr", "matrixStats", "metagenomeSeq", "plotly", "purrr", "readr", "reshape2", "rlang", "rmarkdown", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "stringr", "tibble", "tidyr", "vegan"] }, "microbiomeMarker": { "name": "microbiomeMarker", "version": "1.10.0", "sha256": "07w77cm7fjkqnc1rkj9dj6nashpkwbq43nwp6bsq5wp8k4y26gjn", - "depends": ["ALDEx2", "ANCOMBC", "Biobase", "BiocGenerics", "BiocParallel", "biomformat", "Biostrings", "caret", "coin", "ComplexHeatmap", "DESeq2", "dplyr", "edgeR", "ggplot2", "ggsignif", "ggtree", "IRanges", "limma", "magrittr", "MASS", "metagenomeSeq", "multtest", "patchwork", "phyloseq", "plotROC", "pROC", "purrr", "rlang", "S4Vectors", "tibble", "tidyr", "tidytree", "vegan", "yaml"] + "depends": ["ALDEx2", "ANCOMBC", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "ComplexHeatmap", "DESeq2", "IRanges", "MASS", "S4Vectors", "biomformat", "caret", "coin", "dplyr", "edgeR", "ggplot2", "ggsignif", "ggtree", "limma", "magrittr", "metagenomeSeq", "multtest", "pROC", "patchwork", "phyloseq", "plotROC", "purrr", "rlang", "tibble", "tidyr", "tidytree", "vegan", "yaml"] }, "midasHLA": { "name": "midasHLA", "version": "1.12.0", "sha256": "0d7zpv88mfs8bgym72ljbr0wammnppc5q0pcf5970z2zapxqmczy", - "depends": ["assertthat", "broom", "dplyr", "formattable", "HardyWeinberg", "kableExtra", "knitr", "magrittr", "MultiAssayExperiment", "qdapTools", "rlang", "S4Vectors", "stringi", "SummarizedExperiment", "tibble"] + "depends": ["HardyWeinberg", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "assertthat", "broom", "dplyr", "formattable", "kableExtra", "knitr", "magrittr", "qdapTools", "rlang", "stringi", "tibble"] }, "miloR": { "name": "miloR", "version": "2.0.0", "sha256": "1cb5iw90h6raflgmypd2wc8y4mbsv9g8alshh30k1kjm8vlsw92y", - "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "cowplot", "dplyr", "edgeR", "ggbeeswarm", "ggplot2", "ggraph", "ggrepel", "gtools", "igraph", "irlba", "limma", "Matrix", "MatrixGenerics", "matrixStats", "numDeriv", "patchwork", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "Matrix", "MatrixGenerics", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cowplot", "dplyr", "edgeR", "ggbeeswarm", "ggplot2", "ggraph", "ggrepel", "gtools", "igraph", "irlba", "limma", "matrixStats", "numDeriv", "patchwork", "stringr", "tibble", "tidyr"] }, "mimager": { "name": "mimager", "version": "1.28.0", "sha256": "0n535az50yvdvbjwy0rixy4lnlc0psb454xdzqp6rh718jh5yqrf", - "depends": ["affy", "affyPLM", "Biobase", "BiocGenerics", "DBI", "gtable", "oligo", "oligoClasses", "preprocessCore", "S4Vectors", "scales"] + "depends": ["Biobase", "BiocGenerics", "DBI", "S4Vectors", "affy", "affyPLM", "gtable", "oligo", "oligoClasses", "preprocessCore", "scales"] }, "mina": { "name": "mina", "version": "1.12.0", "sha256": "0fkc6cf267fcz7gqaf2grvd9dl1azvymsahszkb6w0rp289nbbn6", - "depends": ["apcluster", "biganalytics", "bigmemory", "foreach", "ggplot2", "Hmisc", "MCL", "parallelDist", "plyr", "Rcpp", "RcppArmadillo", "RcppParallel", "reshape2", "RSpectra", "stringr"] + "depends": ["Hmisc", "MCL", "RSpectra", "Rcpp", "RcppArmadillo", "RcppParallel", "apcluster", "biganalytics", "bigmemory", "foreach", "ggplot2", "parallelDist", "plyr", "reshape2", "stringr"] }, "minet": { "name": "minet", @@ -10171,127 +10213,127 @@ "name": "minfi", "version": "1.50.0", "sha256": "1hk44wddcygh4j7jmj1b0p40hf5qdy1m78x14j19h7z9aq4azdij", - "depends": ["beanplot", "Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "bumphunter", "data_table", "DelayedArray", "DelayedMatrixStats", "genefilter", "GenomeInfoDb", "GenomicRanges", "GEOquery", "HDF5Array", "illuminaio", "IRanges", "lattice", "limma", "MASS", "mclust", "nlme", "nor1mix", "preprocessCore", "quadprog", "RColorBrewer", "reshape", "S4Vectors", "siggenes", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "Biostrings", "DelayedArray", "DelayedMatrixStats", "GEOquery", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "MASS", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "beanplot", "bumphunter", "data_table", "genefilter", "illuminaio", "lattice", "limma", "mclust", "nlme", "nor1mix", "preprocessCore", "quadprog", "reshape", "siggenes"] }, "mirIntegrator": { "name": "mirIntegrator", "version": "1.34.0", "sha256": "1saj71y2h3zczq16ypvmvy17z95klxawiifrlrxw3b61pnf7lpn0", - "depends": ["AnnotationDbi", "ggplot2", "graph", "org_Hs_eg_db", "Rgraphviz", "ROntoTools"] + "depends": ["AnnotationDbi", "ROntoTools", "Rgraphviz", "ggplot2", "graph", "org_Hs_eg_db"] }, "mirTarRnaSeq": { "name": "mirTarRnaSeq", "version": "1.12.0", "sha256": "1wn27pnmax2ay13a6mms6wrhskvqlwmg45jifbfhna1d5ly18rqh", - "depends": ["assertthat", "caTools", "corrplot", "data_table", "dplyr", "ggplot2", "MASS", "pheatmap", "pscl", "purrr", "R_utils", "reshape2", "viridis"] + "depends": ["MASS", "R_utils", "assertthat", "caTools", "corrplot", "data_table", "dplyr", "ggplot2", "pheatmap", "pscl", "purrr", "reshape2", "viridis"] }, "missMethyl": { "name": "missMethyl", "version": "1.38.0", "sha256": "0fnqa7v6lgld4pdqnvgdzly73aj4a4cn8sgszicxsyn1damxsjiw", - "depends": ["AnnotationDbi", "BiasedUrn", "Biobase", "BiocGenerics", "GenomicRanges", "GO_db", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "IlluminaHumanMethylationEPICmanifest", "IRanges", "limma", "methylumi", "minfi", "org_Hs_eg_db", "ruv", "S4Vectors", "statmod", "stringr", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "BiasedUrn", "Biobase", "BiocGenerics", "GO_db", "GenomicRanges", "IRanges", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "IlluminaHumanMethylationEPICmanifest", "S4Vectors", "SummarizedExperiment", "limma", "methylumi", "minfi", "org_Hs_eg_db", "ruv", "statmod", "stringr"] }, "missRows": { "name": "missRows", "version": "1.24.0", "sha256": "0p51nnfxhz5lqxm4vbqhxczaa774g13sh65czj1kkrrzp1g65wm5", - "depends": ["ggplot2", "gtools", "MultiAssayExperiment", "plyr", "S4Vectors"] + "depends": ["MultiAssayExperiment", "S4Vectors", "ggplot2", "gtools", "plyr"] }, "mistyR": { "name": "mistyR", "version": "1.12.0", "sha256": "0w0ij222749pv89y0gq9c01cgsasw1lb3g0bx3sf6j62gdlf1gdp", - "depends": ["assertthat", "caret", "deldir", "digest", "distances", "dplyr", "filelock", "furrr", "ggplot2", "purrr", "R_utils", "ranger", "readr", "ridge", "rlang", "rlist", "stringr", "tibble", "tidyr", "tidyselect", "withr"] + "depends": ["R_utils", "assertthat", "caret", "deldir", "digest", "distances", "dplyr", "filelock", "furrr", "ggplot2", "purrr", "ranger", "readr", "ridge", "rlang", "rlist", "stringr", "tibble", "tidyr", "tidyselect", "withr"] }, "mitch": { "name": "mitch", "version": "1.16.0", "sha256": "1x65vxjbbd7vswv9lpa0fx5l1m629n0iayb54s3xhidn3xylizsb", - "depends": ["beeswarm", "echarts4r", "GGally", "ggplot2", "gplots", "gridExtra", "kableExtra", "knitr", "MASS", "plyr", "reshape2", "rmarkdown"] + "depends": ["GGally", "MASS", "beeswarm", "echarts4r", "ggplot2", "gplots", "gridExtra", "kableExtra", "knitr", "plyr", "reshape2", "rmarkdown"] }, "mitoClone2": { "name": "mitoClone2", "version": "1.10.0", "sha256": "1vmbyraranbfywk1mmr2arbzw8fsxkyqh5nkzd2w92vpahp7vn2d", - 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"depends": ["ClusterR", "edgeR", "limma", "MASS", "matrixStats", "NMI", "reshape2", "S4Vectors", "SummarizedExperiment", "topGO", "viridis", "zoo"] + "depends": ["ClusterR", "MASS", "NMI", "S4Vectors", "SummarizedExperiment", "edgeR", "limma", "matrixStats", "reshape2", "topGO", "viridis", "zoo"] }, "mobileRNA": { "name": "mobileRNA", "version": "1.0.11", "sha256": "10p37qr8wz6chh44fh1nri2db5qqghbbzbpjm02safxdx7h88081", - "depends": ["BiocGenerics", "bioseq", "Biostrings", "data_table", "DESeq2", "dplyr", "edgeR", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggrepel", "IRanges", "pheatmap", "progress", "RColorBrewer", "reticulate", "rlang", "rtracklayer", "S4Vectors", "scales", "SimDesign", "SummarizedExperiment", "tidyr", "tidyselect"] + "depends": ["BiocGenerics", "Biostrings", "DESeq2", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "SimDesign", "SummarizedExperiment", "bioseq", "data_table", "dplyr", "edgeR", "ggplot2", "ggrepel", "pheatmap", "progress", "reticulate", "rlang", "rtracklayer", "scales", "tidyr", "tidyselect"] }, "mogsa": { "name": "mogsa", "version": "1.38.0", "sha256": "01hr97j5i20qwpck6nfr79wx31y7igz1wzr2m1zdivggb4jg94x7", - "depends": ["Biobase", "BiocGenerics", "cluster", "corpcor", "genefilter", "gplots", "graphite", "GSEABase", "svd"] + "depends": ["Biobase", "BiocGenerics", "GSEABase", "cluster", "corpcor", "genefilter", "gplots", "graphite", "svd"] }, "monaLisa": { "name": "monaLisa", - "version": "1.10.0", - "sha256": "0znan1yh35mxrjn6x5xz2g5pl0dhh0nklyx8rbsn09hn1khb8y5l", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "circlize", "ComplexHeatmap", "GenomeInfoDb", "GenomicRanges", "glmnet", "IRanges", "RSQLite", "S4Vectors", "stabs", "SummarizedExperiment", "TFBSTools", "vioplot", "XVector"] + "version": "1.10.1", + "sha256": "1pa7q4jr21yx4qf17bs7pjk21fjp4fdlij95gw9ffc5a98513m7b", + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "ComplexHeatmap", "GenomeInfoDb", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "SummarizedExperiment", "TFBSTools", "XVector", "circlize", "glmnet", "stabs", "vioplot"] }, "monocle": { "name": "monocle", "version": "2.32.0", "sha256": "0b09mf9fph0mb0zing0prc757d223858q9lj4j3kfpfjpd3jffai", - "depends": ["Biobase", "BiocGenerics", "biocViews", "cluster", "combinat", "DDRTree", "dplyr", "fastICA", "ggplot2", "HSMMSingleCell", "igraph", "irlba", "leidenbase", "limma", "MASS", "Matrix", "matrixStats", "pheatmap", "plyr", "proxy", "RANN", "Rcpp", "reshape2", "Rtsne", "slam", "stringr", "tibble", "VGAM", "viridis"] + "depends": ["Biobase", "BiocGenerics", "DDRTree", "HSMMSingleCell", "MASS", "Matrix", "RANN", "Rcpp", "Rtsne", "VGAM", "biocViews", "cluster", "combinat", "dplyr", "fastICA", "ggplot2", "igraph", "irlba", "leidenbase", "limma", "matrixStats", "pheatmap", "plyr", "proxy", "reshape2", "slam", "stringr", "tibble", "viridis"] }, "mosaics": { "name": "mosaics", "version": "2.42.0", "sha256": "000bwz1z8nwzgyaz69z6krr4ksggpsq48ni9rzl25m1bc27skldj", - "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "lattice", "MASS", "Rcpp", "Rsamtools", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "MASS", "Rcpp", "Rsamtools", "S4Vectors", "lattice"] }, "mosbi": { "name": "mosbi", "version": "1.10.0", "sha256": "0kvwsiwqvsphgjcflr1zjhp91k867bqg6x6gj72kl6x9an3rxpri", - "depends": ["akmbiclust", "BH", "biclust", "fabia", "igraph", "isa2", "QUBIC", "RColorBrewer", "Rcpp", "RcppParallel", "xml2"] + "depends": ["BH", "QUBIC", "RColorBrewer", "Rcpp", "RcppParallel", "akmbiclust", "biclust", "fabia", "igraph", "isa2", "xml2"] }, "mosdef": { "name": "mosdef", "version": "1.0.0", "sha256": "14zv9mgiqcj2s34hg8wfdij1gss324rkq42clg8f3ancambj74vp", - "depends": ["AnnotationDbi", "clusterProfiler", "DESeq2", "DT", "ggforce", "ggplot2", "ggrepel", "GO_db", "goseq", "htmltools", "RColorBrewer", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "topGO"] + "depends": ["AnnotationDbi", "DESeq2", "DT", "GO_db", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "clusterProfiler", "ggforce", "ggplot2", "ggrepel", "goseq", "htmltools", "rlang", "scales", "topGO"] }, "motifStack": { "name": "motifStack", "version": "1.48.0", "sha256": "15v4z1a0kg4ic411aprzc9b7i2l6c456sfj3jaxy95anw3j3iskj", - "depends": ["ade4", "Biostrings", "ggplot2", "htmlwidgets", "TFBSTools", "XML"] + "depends": ["Biostrings", "TFBSTools", "XML", "ade4", "ggplot2", "htmlwidgets"] }, "motifTestR": { "name": "motifTestR", "version": "1.0.3", "sha256": "19m8y69cd1x79cqwgwf6360mv7kn0a2gv3lphy2i60p6vlq99s8j", - "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "ggplot2", "harmonicmeanp", "IRanges", "matrixStats", "patchwork", "rlang", "S4Vectors", "universalmotif"] + "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "ggplot2", "harmonicmeanp", "matrixStats", "patchwork", "rlang", "universalmotif"] }, "motifbreakR": { "name": "motifbreakR", "version": "2.18.0", "sha256": "1mxs83l8yrbcx353h0wpc0lczn1jc0y5vg59y9g9dabk41csib47", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "matrixStats", "MotifDb", "motifStack", "pwalign", "rtracklayer", "S4Vectors", "stringr", "SummarizedExperiment", "TFMPvalue", "VariantAnnotation"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "MotifDb", "S4Vectors", "SummarizedExperiment", "TFMPvalue", "VariantAnnotation", "matrixStats", "motifStack", "pwalign", "rtracklayer", "stringr"] }, "motifcounter": { "name": "motifcounter", @@ -10303,61 +10345,61 @@ "name": "motifmatchr", "version": "1.26.0", "sha256": "1wpvdg5x51cbzpqa4s2s0zl9h7fsrsp87mxxlhxs65zx6yyfj2xl", - "depends": ["Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TFBSTools"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "RcppArmadillo", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TFBSTools"] }, "mpra": { "name": "mpra", - "version": "1.26.0", - "sha256": "181v4ickndbng6bhvvzyn92kq61izjhx27hkbsryqgnf0xlx1c33", - "depends": ["BiocGenerics", "limma", "S4Vectors", "scales", "statmod", "SummarizedExperiment"] + "version": "1.26.2", + "sha256": "061pji88qrzclq7wyklba3492k133zzqsalx377n42fxrw0593z9", + "depends": ["BiocGenerics", "S4Vectors", "SummarizedExperiment", "limma", "scales", "statmod"] }, "msImpute": { "name": "msImpute", "version": "1.14.0", "sha256": "1qjkaa5ksd67izfw5jgg1l843jn6d7h0asp99sd340wbqcdfnyix", - "depends": ["data_table", "dplyr", "FNN", "limma", "matrixStats", "mvtnorm", "pdist", "reticulate", "scran", "softImpute", "tidyr"] + "depends": ["FNN", "data_table", "dplyr", "limma", "matrixStats", "mvtnorm", "pdist", "reticulate", "scran", "softImpute", "tidyr"] }, "msPurity": { "name": "msPurity", "version": "1.30.1", "sha256": "03h492l2x8isd1h4zmr5k6xykswimqfcxfgd67xpjjr0anrc8yl0", - "depends": ["DBI", "dbplyr", "doSNOW", "dplyr", "fastcluster", "foreach", "ggplot2", "magrittr", "mzR", "plyr", "Rcpp", "reshape2", "RSQLite", "stringr"] + "depends": ["DBI", "RSQLite", "Rcpp", "dbplyr", "doSNOW", "dplyr", "fastcluster", "foreach", "ggplot2", "magrittr", "mzR", "plyr", "reshape2", "stringr"] }, "msa": { "name": "msa", - "version": "1.36.0", - "sha256": "05i6pp10nn4icl51rx3b48s861hnd1yx72d933fphm6a5082zxms", + "version": "1.36.1", + "sha256": "16ixhinhcbf2nvdmqria231s4qhr8lzhr7yqr7ljrnnwiqadfr67", "depends": ["BiocGenerics", "Biostrings", "IRanges", "Rcpp", "S4Vectors"] }, "msgbsR": { "name": "msgbsR", "version": "1.28.0", "sha256": "06nbcb1nkci83kjl9l05d3vyfz4w21y0s51wg344bzjra1ycb9gl", - "depends": ["BSgenome", "easyRNASeq", "edgeR", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "IRanges", "plyr", "R_utils", "Rsamtools", "S4Vectors", "SummarizedExperiment"] + "depends": ["BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "R_utils", "Rsamtools", "S4Vectors", "SummarizedExperiment", "easyRNASeq", "edgeR", "ggbio", "ggplot2", "plyr"] }, "mslp": { "name": "mslp", "version": "1.6.0", "sha256": "0qafwb6rp0r0h5iazj13q703yvld5s1si93vn4gcxk66pgg9fm3w", - "depends": ["data_table", "doRNG", "fmsb", "foreach", "magrittr", "org_Hs_eg_db", "pROC", "randomForest", "RankProd"] + "depends": ["RankProd", "data_table", "doRNG", "fmsb", "foreach", "magrittr", "org_Hs_eg_db", "pROC", "randomForest"] }, "msmsEDA": { "name": "msmsEDA", "version": "1.42.0", "sha256": "1fzw36181rw7z62qggq7j22qhq8zrblpmv8qkqlfg140ywvwv08a", - "depends": ["gplots", "MASS", "MSnbase", "RColorBrewer"] + "depends": ["MASS", "MSnbase", "RColorBrewer", "gplots"] }, "msmsTests": { "name": "msmsTests", "version": "1.42.0", "sha256": "0fadwss9z4bfgkhrrqv322j8x40l5cl4ib85057h4fn03qdijqhq", - "depends": ["edgeR", "msmsEDA", "MSnbase", "qvalue"] + "depends": ["MSnbase", "edgeR", "msmsEDA", "qvalue"] }, "msqrob2": { "name": "msqrob2", "version": "1.12.0", "sha256": "1mg4a9mjvzj4y6jw5qpz53wg1h7z6a5l2b20ibp0wr67rns5xkix", - "depends": ["BiocParallel", "codetools", "limma", "lme4", "MASS", "Matrix", "MultiAssayExperiment", "purrr", "QFeatures", "SummarizedExperiment"] + "depends": ["BiocParallel", "MASS", "Matrix", "MultiAssayExperiment", "QFeatures", "SummarizedExperiment", "codetools", "limma", "lme4", "purrr"] }, "multiClust": { "name": "multiClust", @@ -10375,25 +10417,25 @@ "name": "multiHiCcompare", "version": "1.22.0", "sha256": "0h5b8yaqxy0gpm1kndv0dyz6pvacdy7vh3mbdkbz04q4ng1jnk12", - "depends": ["aggregation", "BiocParallel", "data_table", "dplyr", "edgeR", "GenomeInfoDb", "GenomeInfoDbData", "GenomicRanges", "HiCcompare", "pbapply", "pheatmap", "qqman"] + "depends": ["BiocParallel", "GenomeInfoDb", "GenomeInfoDbData", "GenomicRanges", "HiCcompare", "aggregation", "data_table", "dplyr", "edgeR", "pbapply", "pheatmap", "qqman"] }, "multiMiR": { "name": "multiMiR", "version": "1.26.0", "sha256": "0pzifw4b61v1wrfy6lsb5i4xxpmhl3g6sml09akfdy0skfx5lam8", - "depends": ["AnnotationDbi", "BiocGenerics", "dplyr", "purrr", "RCurl", "tibble", "XML"] + "depends": ["AnnotationDbi", "BiocGenerics", "RCurl", "XML", "dplyr", "purrr", "tibble"] }, "multiWGCNA": { "name": "multiWGCNA", "version": "1.2.0", "sha256": "1y2rwwy5q2ak861hg8nm5f13rmf2b9dmhsmjwvxc75nzdjg9yqcz", - "depends": ["cowplot", "data_table", "dcanr", "dplyr", "flashClust", "ggalluvial", "ggplot2", "ggrepel", "igraph", "patchwork", "readr", "reshape2", "scales", "stringr", "SummarizedExperiment", "WGCNA"] + "depends": ["SummarizedExperiment", "WGCNA", "cowplot", "data_table", "dcanr", "dplyr", "flashClust", "ggalluvial", "ggplot2", "ggrepel", "igraph", "patchwork", "readr", "reshape2", "scales", "stringr"] }, "multicrispr": { "name": "multicrispr", "version": "1.14.0", "sha256": "1625pqby6b0k67vn1h90j5899q5rhc815b64nywnvxlaia7hjvpm", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "CRISPRseek", "data_table", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "karyoploteR", "magrittr", "plyranges", "Rbowtie", "reticulate", "rtracklayer", "stringi", "tidyr", "tidyselect"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "CRISPRseek", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "Rbowtie", "data_table", "ggplot2", "karyoploteR", "magrittr", "plyranges", "reticulate", "rtracklayer", "stringi", "tidyr", "tidyselect"] }, "multiscan": { "name": "multiscan", @@ -10405,7 +10447,7 @@ "name": "multistateQTL", "version": "1.0.0", "sha256": "1y983wj9awz29rv2fg8ryyindza8gjn54dn775p00zqs7qjnny3m", - "depends": ["circlize", "collapse", "ComplexHeatmap", "data_table", "dplyr", "fitdistrplus", "ggplot2", "mashr", "matrixStats", "QTLExperiment", "S4Vectors", "SummarizedExperiment", "tidyr", "viridis"] + "depends": ["ComplexHeatmap", "QTLExperiment", "S4Vectors", "SummarizedExperiment", "circlize", "collapse", "data_table", "dplyr", "fitdistrplus", "ggplot2", "mashr", "matrixStats", "tidyr", "viridis"] }, "multtest": { "name": "multtest", @@ -10417,13 +10459,13 @@ "name": "mumosa", "version": "1.12.0", "sha256": "1r3i19q5i2pfs8xaag4qcb64hxwkz49msbvv454n5cb2zp1nafvd", - "depends": ["batchelor", "beachmat", "BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "igraph", "IRanges", "Matrix", "metapod", "S4Vectors", "ScaledMatrix", "scran", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "uwot"] + "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "IRanges", "Matrix", "S4Vectors", "ScaledMatrix", "SingleCellExperiment", "SummarizedExperiment", "batchelor", "beachmat", "igraph", "metapod", "scran", "scuttle", "uwot"] }, "muscat": { "name": "muscat", "version": "1.18.0", "sha256": "1gafcq3p693f28gz3p8hk8mlxd9zja95h8953sr56n7krfffy1gi", - "depends": ["BiocParallel", "blme", "ComplexHeatmap", "data_table", "DESeq2", "dplyr", "edgeR", "ggplot2", "glmmTMB", "limma", "lme4", "lmerTest", "Matrix", "matrixStats", "progress", "purrr", "S4Vectors", "scales", "scater", "sctransform", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "variancePartition", "viridis"] + "depends": ["BiocParallel", "ComplexHeatmap", "DESeq2", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "blme", "data_table", "dplyr", "edgeR", "ggplot2", "glmmTMB", "limma", "lme4", "lmerTest", "matrixStats", "progress", "purrr", "scales", "scater", "sctransform", "scuttle", "variancePartition", "viridis"] }, "muscle": { "name": "muscle", @@ -10433,33 +10475,33 @@ }, "musicatk": { "name": "musicatk", - "version": "1.14.0", - "sha256": "1mp8c42pk5pl4ymvz0vjvgh0vq10kk67844vvspbhwpfdmsabr2b", - "depends": ["Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "BSgenome_Mmusculus_UCSC_mm10", "BSgenome_Mmusculus_UCSC_mm9", "cluster", "ComplexHeatmap", "data_table", "decompTumor2Sig", "dplyr", "factoextra", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "gtools", "IRanges", "maftools", "magrittr", "MASS", "Matrix", "matrixTests", "MCMCprecision", "NMF", "philentropy", "plotly", "rlang", "S4Vectors", "shiny", "stringi", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyverse", "topicmodels", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "uwot", "VariantAnnotation"] + "version": "1.14.1", + "sha256": "1bz303lmxjvj24pb03mc64pv0595snhn6g99q3a40w73sqlxh14c", + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg19", "BSgenome_Hsapiens_UCSC_hg38", "BSgenome_Mmusculus_UCSC_mm10", "BSgenome_Mmusculus_UCSC_mm9", "Biostrings", "ComplexHeatmap", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MASS", "MCMCprecision", "Matrix", "NMF", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "VariantAnnotation", "cluster", "data_table", "decompTumor2Sig", "dplyr", "factoextra", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "gtools", "maftools", "magrittr", "matrixTests", "philentropy", "plotly", "rlang", "shiny", "stringi", "stringr", "tibble", "tidyr", "tidyverse", "topicmodels", "uwot"] }, "mygene": { "name": "mygene", "version": "1.40.0", "sha256": "0ybvabgdjm63yvvkpkldqddvdcfsncr25rnsw17kbdachar29shj", - "depends": ["GenomicFeatures", "Hmisc", "httr", "jsonlite", "plyr", "S4Vectors", "sqldf", "txdbmaker"] + "depends": ["GenomicFeatures", "Hmisc", "S4Vectors", "httr", "jsonlite", "plyr", "sqldf", "txdbmaker"] }, "myvariant": { "name": "myvariant", "version": "1.34.0", "sha256": "1f82x3vahbsccvyg5gvi34llanzscpvp0pbqhm1ki9frx9hqwysz", - "depends": ["GenomeInfoDb", "Hmisc", "httr", "jsonlite", "magrittr", "plyr", "S4Vectors", "VariantAnnotation"] + "depends": ["GenomeInfoDb", "Hmisc", "S4Vectors", "VariantAnnotation", "httr", "jsonlite", "magrittr", "plyr"] }, "mzID": { "name": "mzID", "version": "1.42.0", "sha256": "0kh9swzh3hvi6qi64cgr13f22s1mgvz2rid5psb1gy4l3biwadj5", - "depends": ["doParallel", "foreach", "iterators", "plyr", "ProtGenerics", "XML"] + "depends": ["ProtGenerics", "XML", "doParallel", "foreach", "iterators", "plyr"] }, "mzR": { "name": "mzR", "version": "2.38.0", "sha256": "02dz23xns9ryz98nip1w68h9q5ckxpyl1zvzklsp4j7p9z2400dk", - "depends": ["Biobase", "BiocGenerics", "ncdf4", "ProtGenerics", "Rcpp", "Rhdf5lib"] + "depends": ["Biobase", "BiocGenerics", "ProtGenerics", "Rcpp", "Rhdf5lib", "ncdf4"] }, "ncGTW": { "name": "ncGTW", @@ -10471,25 +10513,25 @@ "name": "ncRNAtools", "version": "1.14.0", "sha256": "151s12kg88x4nymzvpzwlfil7rvrbaa99agfxzz03r8dyjnqrqlq", - "depends": ["GenomicRanges", "ggplot2", "httr", "IRanges", "S4Vectors", "xml2"] + "depends": ["GenomicRanges", "IRanges", "S4Vectors", "ggplot2", "httr", "xml2"] }, "ncdfFlow": { "name": "ncdfFlow", "version": "2.50.0", "sha256": "1mbq3190nxlzhfb58i7s2f5f9fngda1icnihmyplagh64savlpcn", - "depends": ["BH", "Biobase", "BiocGenerics", "cpp11", "flowCore", "Rhdf5lib", "zlibbioc"] + "depends": ["BH", "Biobase", "BiocGenerics", "Rhdf5lib", "cpp11", "flowCore", "zlibbioc"] }, "ndexr": { "name": "ndexr", "version": "1.26.0", "sha256": "1jl7z4a1rdsivc774k15v3q40isgp1ly3lsmgflfkq7jsx62xl5j", - "depends": ["httr", "jsonlite", "plyr", "RCX", "tidyr"] + "depends": ["RCX", "httr", "jsonlite", "plyr", "tidyr"] }, "nearBynding": { "name": "nearBynding", "version": "1.14.0", "sha256": "0ni6mipdbwzc0gi8mws1d1b8ylj0pjlvi81kv9r3pm93psr67pj3", - "depends": ["BiocGenerics", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "gplots", "magrittr", "matrixStats", "plyranges", "R_utils", "rlang", "Rsamtools", "rtracklayer", "S4Vectors", "transport", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "R_utils", "Rsamtools", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "dplyr", "ggplot2", "gplots", "magrittr", "matrixStats", "plyranges", "rlang", "rtracklayer", "transport"] }, "nempi": { "name": "nempi", @@ -10501,55 +10543,55 @@ "name": "netDx", "version": "1.16.0", "sha256": "00ghcj5hzb06pi9aj2rdnasyqgqnvr9qjb0m6b0476yv2mx5x24k", - "depends": ["bigmemory", "BiocFileCache", "combinat", "doParallel", "foreach", "GenomeInfoDb", "GenomicRanges", "ggplot2", "glmnet", "httr", "igraph", "IRanges", "MultiAssayExperiment", "plotrix", "pracma", "rappdirs", "RColorBrewer", "reshape2", "ROCR", "Rtsne", "S4Vectors"] + "depends": ["BiocFileCache", "GenomeInfoDb", "GenomicRanges", "IRanges", "MultiAssayExperiment", "RColorBrewer", "ROCR", "Rtsne", "S4Vectors", "bigmemory", "combinat", "doParallel", "foreach", "ggplot2", "glmnet", "httr", "igraph", "plotrix", "pracma", "rappdirs", "reshape2"] }, "netSmooth": { "name": "netSmooth", "version": "1.24.0", "sha256": "0nry64lvqwwq672c6callfjfa0y14igvqpvrvfs2hm0qj8qmg2q8", - "depends": ["cluster", "clusterExperiment", "data_table", "DelayedArray", "entropy", "HDF5Array", "Matrix", "scater", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DelayedArray", "HDF5Array", "Matrix", "SingleCellExperiment", "SummarizedExperiment", "cluster", "clusterExperiment", "data_table", "entropy", "scater"] }, "netZooR": { "name": "netZooR", "version": "1.8.0", "sha256": "0z1wi0csnpjz70q5pl5wmdfgqnq66yk9gysxxid8rmkagqxvbg73", - "depends": ["AnnotationDbi", "assertthat", "Biobase", "data_table", "doParallel", "dplyr", "foreach", "ggdendro", "ggplot2", "GO_db", "GOstats", "gplots", "igraph", "MASS", "Matrix", "matrixcalc", "matrixStats", "nnet", "org_Hs_eg_db", "pandaR", "penalized", "RCy3", "reshape", "reshape2", "reticulate", "STRINGdb", "tidyr", "vegan", "viridisLite", "yarn"] + "depends": ["AnnotationDbi", "Biobase", "GO_db", "GOstats", "MASS", "Matrix", "RCy3", "STRINGdb", "assertthat", "data_table", "doParallel", "dplyr", "foreach", "ggdendro", "ggplot2", "gplots", "igraph", "matrixStats", "matrixcalc", "nnet", "org_Hs_eg_db", "pandaR", "penalized", "reshape", "reshape2", "reticulate", "tidyr", "vegan", "viridisLite", "yarn"] }, "netboost": { "name": "netboost", "version": "2.12.0", "sha256": "0xirmys108qhxg7073vm90463a7qs6z557516ff1yczhldaq4psy", - "depends": ["BiocStyle", "colorspace", "dynamicTreeCut", "impute", "R_utils", "Rcpp", "RcppParallel", "WGCNA"] + "depends": ["BiocStyle", "R_utils", "Rcpp", "RcppParallel", "WGCNA", "colorspace", "dynamicTreeCut", "impute"] }, "nethet": { "name": "nethet", "version": "1.36.0", "sha256": "1mr42pdm2sjpbmiiwjpqd0pvbnc5imlgmg14swc2pp66dl60g7b3", - "depends": ["CompQuadForm", "GeneNet", "ggm", "ggplot2", "glasso", "glmnet", "GSA", "huge", "ICSNP", "limma", "mclust", "multtest", "mvtnorm", "network"] + "depends": ["CompQuadForm", "GSA", "GeneNet", "ICSNP", "ggm", "ggplot2", "glasso", "glmnet", "huge", "limma", "mclust", "multtest", "mvtnorm", "network"] }, "netprioR": { "name": "netprioR", "version": "1.30.0", "sha256": "0kgsgjc2q4wvdwbqfx79ql85k6xc60165zair7nwc89wn07rnswy", - "depends": ["doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "Matrix", "pROC", "sparseMVN"] + "depends": ["Matrix", "doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "pROC", "sparseMVN"] }, "netresponse": { "name": "netresponse", "version": "1.64.0", "sha256": "13lynfqsbv8cp6hd452bky4mkf029jwvryx8mzdcx15r4hwsqh5r", - "depends": ["BiocStyle", "ggplot2", "graph", "igraph", "mclust", "minet", "plyr", "qvalue", "RColorBrewer", "reshape2", "Rgraphviz", "rmarkdown"] + "depends": ["BiocStyle", "RColorBrewer", "Rgraphviz", "ggplot2", "graph", "igraph", "mclust", "minet", "plyr", "qvalue", "reshape2", "rmarkdown"] }, "ngsReports": { "name": "ngsReports", - "version": "2.6.0", - "sha256": "11k4fbwy6shkb3z9np7wnnhbjpka3ymm8ja8dnw1jpdc3l1jx537", + "version": "2.6.1", + "sha256": "13dmy1g822h8w9f2ylvs40zn810zxamy9jr7vncsbbk6cr87h9lg", "depends": ["BiocGenerics", "Biostrings", "checkmate", "dplyr", "forcats", "ggdendro", "ggplot2", "jsonlite", "lifecycle", "lubridate", "patchwork", "plotly", "reshape2", "rlang", "rmarkdown", "scales", "stringr", "tibble", "tidyr", "tidyselect", "zoo"] }, "nipalsMCIA": { "name": "nipalsMCIA", "version": "1.2.0", "sha256": "0r14hmglxlrwryc6qwn20vfrmy5k2pk7l73d3fz5bmfja06ms6n5", - "depends": ["ComplexHeatmap", "dplyr", "fgsea", "ggplot2", "MultiAssayExperiment", "pracma", "rlang", "RSpectra", "scales", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "MultiAssayExperiment", "RSpectra", "SummarizedExperiment", "dplyr", "fgsea", "ggplot2", "pracma", "rlang", "scales"] }, "nnNorm": { "name": "nnNorm", @@ -10561,7 +10603,7 @@ "name": "nnSVG", "version": "1.8.0", "sha256": "00346z7i5hgljylv00l5pcmj3y769mqnhac0f4l7jhiww3xswfbs", - "depends": ["BiocParallel", "BRISC", "Matrix", "matrixStats", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["BRISC", "BiocParallel", "Matrix", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "matrixStats"] }, "normalize450K": { "name": "normalize450K", @@ -10573,7 +10615,7 @@ "name": "normr", "version": "1.30.0", "sha256": "1lkh4a6c499g4wicj4khkyhz361k4q0aydk4gc122vn4877z14c6", - "depends": ["bamsignals", "GenomeInfoDb", "GenomicRanges", "IRanges", "qvalue", "Rcpp", "rtracklayer"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rcpp", "bamsignals", "qvalue", "rtracklayer"] }, "npGSEA": { "name": "npGSEA", @@ -10591,7 +10633,7 @@ "name": "nucleR", "version": "2.36.0", "sha256": "1gbn4rpgil579xkrwd78wc7h6h0f8j1kjz0vvlijy63i6g380wfk", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "Rsamtools", "S4Vectors", "ShortRead"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "dplyr", "ggplot2", "magrittr"] }, "nucleoSim": { "name": "nucleoSim", @@ -10603,7 +10645,7 @@ "name": "nullranges", "version": "1.10.0", "sha256": "0a20aqqja5nkp39v7mxjnc98in63zhl00mnhsm952ja7v1l2xfsw", - "depends": ["data_table", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggridges", "InteractionSet", "IRanges", "plyranges", "progress", "rlang", "S4Vectors", "scales"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "S4Vectors", "data_table", "ggplot2", "ggridges", "plyranges", "progress", "rlang", "scales"] }, "occugene": { "name": "occugene", @@ -10615,7 +10657,7 @@ "name": "octad", "version": "1.6.0", "sha256": "1nlad40c9mzs74zrc82smmmyknw4dr88c6zm0ywm62v0wb8l22n7", - "depends": ["AnnotationHub", "Biobase", "data_table", "DESeq2", "dplyr", "EDASeq", "edgeR", "ExperimentHub", "foreach", "ggplot2", "GSVA", "htmlwidgets", "httr", "limma", "magrittr", "octad_db", "plotly", "qpdf", "reshape2", "Rfast", "rhdf5", "RUVSeq", "S4Vectors"] + "depends": ["AnnotationHub", "Biobase", "DESeq2", "EDASeq", "ExperimentHub", "GSVA", "RUVSeq", "Rfast", "S4Vectors", "data_table", "dplyr", "edgeR", "foreach", "ggplot2", "htmlwidgets", "httr", "limma", "magrittr", "octad_db", "plotly", "qpdf", "reshape2", "rhdf5"] }, "odseq": { "name": "odseq", @@ -10627,49 +10669,49 @@ "name": "oligo", "version": "1.68.2", "sha256": "0ch6b4rg5v6fj0fgniqiigx1gnnqgwji90bxqngllman388bx867", - "depends": ["affxparser", "affyio", "Biobase", "BiocGenerics", "Biostrings", "DBI", "ff", "oligoClasses", "preprocessCore", "RSQLite", "zlibbioc"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "DBI", "RSQLite", "affxparser", "affyio", "ff", "oligoClasses", "preprocessCore", "zlibbioc"] }, "oligoClasses": { "name": "oligoClasses", "version": "1.66.0", "sha256": "15icfcmpwrnjpyahc4v168fpcbsml6x7h4drmsyh9l8d1284yb4n", - "depends": ["affyio", "Biobase", "BiocGenerics", "BiocManager", "Biostrings", "DBI", "ff", "foreach", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocManager", "Biostrings", "DBI", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "SummarizedExperiment", "affyio", "ff", "foreach"] }, "omada": { "name": "omada", "version": "1.6.0", "sha256": "1by6im4frl724yif9pjgcmp016hahj5xj35h1zqa4k5g8nw54f9s", - "depends": ["clValid", "diceR", "dplyr", "fpc", "genieclust", "ggplot2", "glmnet", "kernlab", "pdfCluster", "Rcpp", "reshape"] + "depends": ["Rcpp", "clValid", "diceR", "dplyr", "fpc", "genieclust", "ggplot2", "glmnet", "kernlab", "pdfCluster", "reshape"] }, "omicRexposome": { "name": "omicRexposome", "version": "1.26.0", "sha256": "0p3x3pp3337nvmqqssrbfh6zn2fp260ss8wjc2c90b0gr4c4h6wc", - "depends": ["Biobase", "ggplot2", "ggrepel", "gridExtra", "isva", "limma", "MultiDataSet", "omicade4", "PMA", "rexposome", "SmartSVA", "stringr", "SummarizedExperiment", "sva"] + "depends": ["Biobase", "MultiDataSet", "PMA", "SmartSVA", "SummarizedExperiment", "ggplot2", "ggrepel", "gridExtra", "isva", "limma", "omicade4", "rexposome", "stringr", "sva"] }, "omicade4": { "name": "omicade4", "version": "1.44.0", "sha256": "18gp8qpmnbc5yjqyvvwvmrdybvm6zddc0r8bfglxz5wg4a91h4wk", - "depends": ["ade4", "Biobase", "made4"] + "depends": ["Biobase", "ade4", "made4"] }, "omicplotR": { "name": "omicplotR", "version": "1.24.0", "sha256": "1zb4xik2rvznbigfh42k97mlfc4ls997cyv4ixd34qp0z3929djc", - "depends": ["ALDEx2", "compositions", "DT", "jsonlite", "knitr", "matrixStats", "rmarkdown", "shiny", "vegan", "zCompositions"] + "depends": ["ALDEx2", "DT", "compositions", "jsonlite", "knitr", "matrixStats", "rmarkdown", "shiny", "vegan", "zCompositions"] }, "omicsPrint": { "name": "omicsPrint", "version": "1.24.0", "sha256": "0b5mccw1vpcw1i38lcy6cjr6im0iw17a3z8vwfs7f2z7nj72p8cf", - "depends": ["MASS", "matrixStats", "MultiAssayExperiment", "RaggedExperiment", "SummarizedExperiment"] + "depends": ["MASS", "MultiAssayExperiment", "RaggedExperiment", "SummarizedExperiment", "matrixStats"] }, "omicsViewer": { "name": "omicsViewer", "version": "1.8.0", "sha256": "0ij7slf4y708gdw06nmm2w7p3svcadvc9s44rzkgjb66is4h375g", - "depends": ["beeswarm", "Biobase", "curl", "drc", "DT", "fastmatch", "fgsea", "flatxml", "ggplot2", "ggseqlogo", "htmlwidgets", "httr", "Matrix", "matrixStats", "networkD3", "openxlsx", "plotly", "psych", "RColorBrewer", "reshape2", "ROCR", "RSQLite", "S4Vectors", "shiny", "shinybusy", "shinycssloaders", "shinyjs", "shinythemes", "shinyWidgets", "stringr", "SummarizedExperiment", "survival", "survminer"] + "depends": ["Biobase", "DT", "Matrix", "RColorBrewer", "ROCR", "RSQLite", "S4Vectors", "SummarizedExperiment", "beeswarm", "curl", "drc", "fastmatch", "fgsea", "flatxml", "ggplot2", "ggseqlogo", "htmlwidgets", "httr", "matrixStats", "networkD3", "openxlsx", "plotly", "psych", "reshape2", "shiny", "shinyWidgets", "shinybusy", "shinycssloaders", "shinyjs", "shinythemes", "stringr", "survival", "survminer"] }, "ompBAM": { "name": "ompBAM", @@ -10681,37 +10723,37 @@ "name": "oncomix", "version": "1.26.0", "sha256": "01ap90pyj3xdnhryiywa57pl0d8lj4q7qxxvf8ahhbr0a2hy8py0", - "depends": ["ggplot2", "ggrepel", "mclust", "RColorBrewer", "SummarizedExperiment"] + "depends": ["RColorBrewer", "SummarizedExperiment", "ggplot2", "ggrepel", "mclust"] }, "oncoscanR": { "name": "oncoscanR", "version": "1.6.0", "sha256": "1n5rcnbb06pl3b27wkzzmz0l7g3hgfjpi7v7anbhscr2i1hy46b9", - "depends": ["GenomicRanges", "IRanges", "magrittr", "readr", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "S4Vectors", "magrittr", "readr"] }, "onlineFDR": { "name": "onlineFDR", "version": "2.12.0", "sha256": "1sivrkb21dmb7wgdxd0q3nmjlvaqrh21c20s4lq8azn685frlznh", - "depends": ["progress", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "progress"] }, "ontoProc": { "name": "ontoProc", - "version": "1.26.0", - "sha256": "0v4dv6rjrivrx3npjycrlqyivbpksikkj6l8h772sa5hfnwmf943", - "depends": ["AnnotationHub", "Biobase", "BiocFileCache", "dplyr", "DT", "graph", "httr", "igraph", "magrittr", "ontologyIndex", "ontologyPlot", "R_utils", "reticulate", "Rgraphviz", "S4Vectors", "shiny", "SummarizedExperiment"] + "version": "1.26.4", + "sha256": "0d3fypwwnb9qjdfkhd6w0ppy3hdp7ipds78300kq9yp0a6v7a9w2", + "depends": ["AnnotationHub", "Biobase", "BiocFileCache", "DT", "R_utils", "Rgraphviz", "S4Vectors", "SummarizedExperiment", "dplyr", "graph", "httr", "igraph", "magrittr", "ontologyIndex", "ontologyPlot", "reticulate", "shiny"] }, "openCyto": { "name": "openCyto", "version": "2.16.1", "sha256": "13ndjvm3l5pl1jgv7bqp78didqq3rx6br4p1ncqqp68mm048f2ll", - "depends": ["BH", "Biobase", "BiocGenerics", "cpp11", "data_table", "flowClust", "flowCore", "flowViz", "flowWorkspace", "graph", "ncdfFlow", "RBGL", "RColorBrewer"] + "depends": ["BH", "Biobase", "BiocGenerics", "RBGL", "RColorBrewer", "cpp11", "data_table", "flowClust", "flowCore", "flowViz", "flowWorkspace", "graph", "ncdfFlow"] }, "openPrimeR": { "name": "openPrimeR", "version": "1.26.0", "sha256": "1wcwg0hpnmfzzbxsqggmgim15f4zky0xx3ynyypykyh1c5i3f4yi", - "depends": ["ape", "BiocGenerics", "Biostrings", "DECIPHER", "digest", "dplyr", "foreach", "GenomicRanges", "ggplot2", "Hmisc", "IRanges", "lpSolveAPI", "magrittr", "openxlsx", "plyr", "pwalign", "RColorBrewer", "reshape2", "S4Vectors", "scales", "seqinr", "stringdist", "stringr", "uniqtag", "XML"] + "depends": ["BiocGenerics", "Biostrings", "DECIPHER", "GenomicRanges", "Hmisc", "IRanges", "RColorBrewer", "S4Vectors", "XML", "ape", "digest", "dplyr", "foreach", "ggplot2", "lpSolveAPI", "magrittr", "openxlsx", "plyr", "pwalign", "reshape2", "scales", "seqinr", "stringdist", "stringr", "uniqtag"] }, "openPrimeRui": { "name": "openPrimeRui", @@ -10723,7 +10765,7 @@ "name": "oposSOM", "version": "2.22.0", "sha256": "1i6jkhnb7b420zacxxiv4c0il1n7yrvg5v4qnd465d1s2wifwndn", - "depends": ["ape", "Biobase", "biomaRt", "fastICA", "fdrtool", "graph", "igraph", "pixmap", "png", "Rcpp", "RcppParallel", "RCurl", "scatterplot3d", "tsne", "XML"] + "depends": ["Biobase", "RCurl", "Rcpp", "RcppParallel", "XML", "ape", "biomaRt", "fastICA", "fdrtool", "graph", "igraph", "pixmap", "png", "scatterplot3d", "tsne"] }, "oppar": { "name": "oppar", @@ -10735,48 +10777,48 @@ "name": "oppti", "version": "1.18.0", "sha256": "1lmjvncp8h3p9vb4979v5spw2yp7w2mj4w60b728njhp9cxh8k6g", - "depends": ["devtools", "ggplot2", "knitr", "limma", "parallelDist", "pheatmap", "RColorBrewer", "reshape"] + "depends": ["RColorBrewer", "devtools", "ggplot2", "knitr", "limma", "parallelDist", "pheatmap", "reshape"] }, "optimalFlow": { "name": "optimalFlow", "version": "1.16.0", "sha256": "1b7a7xca1fb7732hwzcgz79p5pp6xsy0z5az5inv6g8z7a2wpngn", - "depends": ["dbscan", "doParallel", "dplyr", "ellipse", "flowMeans", "foreach", "optimalFlowData", "randomForest", "Rfast", "rgl", "rlang", "robustbase", "transport"] + "depends": ["Rfast", "dbscan", "doParallel", "dplyr", "ellipse", "flowMeans", "foreach", "optimalFlowData", "randomForest", "rgl", "rlang", "robustbase", "transport"] }, "orthogene": { "name": "orthogene", "version": "1.10.0", "sha256": "12rf9xjziziw7r02assnpa4ncryyqkfibj3bhbrq8vp7ygvbn64a", - "depends": ["babelgene", "data_table", "DelayedArray", "dplyr", "ggplot2", "ggpubr", "ggtree", "gprofiler2", "grr", "homologene", "jsonlite", "Matrix", "patchwork", "repmis"] + "depends": ["DelayedArray", "Matrix", "babelgene", "data_table", "dplyr", "ggplot2", "ggpubr", "ggtree", "gprofiler2", "grr", "homologene", "jsonlite", "patchwork", "repmis"] }, "orthos": { "name": "orthos", "version": "1.2.0", "sha256": "0y5q9dmn6qwq8psgclwzca3bpfiyi7xh325hxj328h3fis1sm9xb", - "depends": ["AnnotationHub", "basilisk", "BiocParallel", "colorspace", "cowplot", "DelayedArray", "dplyr", "ExperimentHub", "ggplot2", "ggpubr", "ggrepel", "ggsci", "HDF5Array", "keras", "orthosData", "plyr", "reticulate", "rlang", "S4Vectors", "SummarizedExperiment", "tensorflow", "tidyr"] + "depends": ["AnnotationHub", "BiocParallel", "DelayedArray", "ExperimentHub", "HDF5Array", "S4Vectors", "SummarizedExperiment", "basilisk", "colorspace", "cowplot", "dplyr", "ggplot2", "ggpubr", "ggrepel", "ggsci", "keras", "orthosData", "plyr", "reticulate", "rlang", "tensorflow", "tidyr"] }, "pRoloc": { "name": "pRoloc", - "version": "1.44.0", - "sha256": "0g3wlr8f5lhsz9yqs0fx2x1f07y5mxcknq0790l0hirmhlj0vvzr", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "biomaRt", "caret", "class", "coda", "dendextend", "e1071", "FNN", "ggplot2", "gtools", "hexbin", "kernlab", "knitr", "LaplacesDemon", "lattice", "MASS", "mclust", "mixtools", "MLInterfaces", "MSnbase", "mvtnorm", "nnet", "plyr", "proxy", "randomForest", "RColorBrewer", "Rcpp", "RcppArmadillo", "sampling", "scales"] + "version": "1.44.1", + "sha256": "09vm0308qzc5hrvck2ksyn5f4zgdg9jpgcxg4zzrczs4ygp5jpzz", + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "FNN", "LaplacesDemon", "MASS", "MLInterfaces", "MSnbase", "RColorBrewer", "Rcpp", "RcppArmadillo", "biomaRt", "caret", "class", "coda", "dendextend", "e1071", "ggplot2", "gtools", "hexbin", "kernlab", "knitr", "lattice", "mclust", "mixtools", "mvtnorm", "nnet", "plyr", "proxy", "randomForest", "sampling", "scales"] }, "pRolocGUI": { "name": "pRolocGUI", "version": "2.14.0", "sha256": "0lxnvh2hx7zayfmdfiqhlwp3gmpx0bsz3ds67zalhvf1xmn2cn88", - "depends": ["Biobase", "BiocGenerics", "colorspace", "colourpicker", "dplyr", "DT", "ggplot2", "MSnbase", "pRoloc", "scales", "shiny", "shinydashboard", "shinydashboardPlus", "shinyhelper", "shinyjs", "shinyWidgets"] + "depends": ["Biobase", "BiocGenerics", "DT", "MSnbase", "colorspace", "colourpicker", "dplyr", "ggplot2", "pRoloc", "scales", "shiny", "shinyWidgets", "shinydashboard", "shinydashboardPlus", "shinyhelper", "shinyjs"] }, "packFinder": { "name": "packFinder", "version": "1.16.0", "sha256": "0y8sw0vyfry6vfn4k9w81m9s4a98bhc5h2a4nvy666qjganhfm8i", - "depends": ["ape", "Biostrings", "GenomicRanges", "IRanges", "kmer", "S4Vectors"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "S4Vectors", "ape", "kmer"] }, "padma": { "name": "padma", - "version": "1.14.0", - "sha256": "1b5pjjd7nn6b64b0cj0alqgbp9782vf33b4m7kz9dvzacsp9n2l0", + "version": "1.14.1", + "sha256": "0h0hhdq1hxvysf7hrk0jpy1jb1b7zq8gh6k905glhqykmdzm0p25", "depends": ["FactoMineR", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment"] }, "pageRank": { @@ -10795,37 +10837,37 @@ "name": "pairedGSEA", "version": "1.4.0", "sha256": "181x2r7af4243b2jmsc71gi8jlq80d4gzkcprr0dk0sis9bh1pqj", - "depends": ["aggregation", "BiocParallel", "DESeq2", "DEXSeq", "fgsea", "ggplot2", "limma", "S4Vectors", "SummarizedExperiment", "sva"] + "depends": ["BiocParallel", "DESeq2", "DEXSeq", "S4Vectors", "SummarizedExperiment", "aggregation", "fgsea", "ggplot2", "limma", "sva"] }, "pairkat": { "name": "pairkat", "version": "1.10.0", "sha256": "1rxwf8nlmc18h6zi95v4xhs5hqaygpba15wsc06msslzr905s6id", - "depends": ["CompQuadForm", "data_table", "igraph", "KEGGREST", "magrittr", "SummarizedExperiment", "tibble"] + "depends": ["CompQuadForm", "KEGGREST", "SummarizedExperiment", "data_table", "igraph", "magrittr", "tibble"] }, "pandaR": { "name": "pandaR", "version": "1.36.0", "sha256": "1cgy9sx5nk94d43baxsm25lh64fmmmznxd832r2wnj6a7p07bbj2", - "depends": ["Biobase", "BiocGenerics", "ggplot2", "hexbin", "igraph", "matrixStats", "plyr", "reshape", "RUnit"] + "depends": ["Biobase", "BiocGenerics", "RUnit", "ggplot2", "hexbin", "igraph", "matrixStats", "plyr", "reshape"] }, "panelcn_mops": { "name": "panelcn.mops", "version": "1.26.0", "sha256": "1fmb1zixg909nqdf34z2aq0llzzsrf4pd73pc8xyachivyx73p4a", - "depends": ["cn_mops", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "cn_mops"] }, "panp": { "name": "panp", "version": "1.74.0", "sha256": "0w5hbjpdwy6g3x38c64r29106s1smyakzpm1qb50f6g8mf99lsvy", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "pareg": { "name": "pareg", "version": "1.8.0", "sha256": "1b9vvn1ppw1vbfmkzkbd6b01pkqnsknbrjv1js983dpjv23x6xlb", - "depends": ["basilisk", "devtools", "doFuture", "doRNG", "DOSE", "dplyr", "foreach", "future", "ggplot2", "ggraph", "ggrepel", "glue", "hms", "igraph", "keras", "logger", "magrittr", "Matrix", "nloptr", "progress", "proxy", "purrr", "reticulate", "rlang", "stringr", "tensorflow", "tfprobability", "tibble", "tidygraph", "tidyr"] + "depends": ["DOSE", "Matrix", "basilisk", "devtools", "doFuture", "doRNG", "dplyr", "foreach", "future", "ggplot2", "ggraph", "ggrepel", "glue", "hms", "igraph", "keras", "logger", "magrittr", "nloptr", "progress", "proxy", "purrr", "reticulate", "rlang", "stringr", "tensorflow", "tfprobability", "tibble", "tidygraph", "tidyr"] }, "parglms": { "name": "parglms", @@ -10843,31 +10885,31 @@ "name": "partCNV", "version": "1.2.0", "sha256": "0f632ih6fy46923a4cf7njkgaqwkmgbwz74djbd2awsnk02afbbw", - "depends": ["AnnotationHub", "data_table", "depmixS4", "GenomicRanges", "magrittr", "Seurat", "SingleCellExperiment"] + "depends": ["AnnotationHub", "GenomicRanges", "Seurat", "SingleCellExperiment", "data_table", "depmixS4", "magrittr"] }, "pathRender": { "name": "pathRender", "version": "1.72.0", "sha256": "0dcds0agwphriqc0d8rw7yycqvxzhv7jj4xs2lvwhzwqrkxicpf1", - "depends": ["AnnotationDbi", "cMAP", "graph", "RColorBrewer", "Rgraphviz"] + "depends": ["AnnotationDbi", "RColorBrewer", "Rgraphviz", "cMAP", "graph"] }, "pathifier": { "name": "pathifier", "version": "1.42.0", "sha256": "1m21713zj4i5iygrj0ygc5zwcrw6038hb486l6c5nvykhzc5w64p", - "depends": ["princurve", "R_oo"] + "depends": ["R_oo", "princurve"] }, "pathlinkR": { "name": "pathlinkR", - "version": "1.0.0", - "sha256": "19i840an94hpyqxz4c4piqy322ynxzf48cxbmxvf5jylxdqjnzf2", - "depends": ["circlize", "clusterProfiler", "ComplexHeatmap", "dplyr", "ggforce", "ggplot2", "ggpubr", "ggraph", "ggrepel", "igraph", "purrr", "sigora", "stringr", "tibble", "tidygraph", "tidyr", "vegan", "visNetwork"] + "version": "1.0.1", + "sha256": "1zwcrxi926m6zyhv3na7jv8cj61m93a3mg7zz6rqblvxrg218gmg", + "depends": ["ComplexHeatmap", "circlize", "clusterProfiler", "dplyr", "ggforce", "ggplot2", "ggpubr", "ggraph", "ggrepel", "igraph", "purrr", "sigora", "stringr", "tibble", "tidygraph", "tidyr", "vegan", "visNetwork"] }, "pathview": { "name": "pathview", "version": "1.44.0", "sha256": "1papw23dhhkqmm864dc3xm028xm0ywc6sjcm7xk93f2j7yj65x0v", - "depends": ["AnnotationDbi", "graph", "KEGGgraph", "KEGGREST", "org_Hs_eg_db", "png", "Rgraphviz", "XML"] + "depends": ["AnnotationDbi", "KEGGREST", "KEGGgraph", "Rgraphviz", "XML", "graph", "org_Hs_eg_db", "png"] }, "pathwayPCA": { "name": "pathwayPCA", @@ -10879,13 +10921,13 @@ "name": "paxtoolsr", "version": "1.38.0", "sha256": "0m3r8ynqkhksgj0d3si3wcnk5a801g1qklin8zm81cr1nlfx67gw", - "depends": ["httr", "igraph", "jsonlite", "plyr", "R_utils", "rappdirs", "readr", "rJava", "rjson", "XML"] + "depends": ["R_utils", "XML", "httr", "igraph", "jsonlite", "plyr", "rJava", "rappdirs", "readr", "rjson"] }, "pcaExplorer": { "name": "pcaExplorer", "version": "2.30.0", "sha256": "1szl2gyhw55ad4phcb7qn14amjb6xg65l3p4hnjzp6rda2cy9437", - "depends": ["AnnotationDbi", "base64enc", "biomaRt", "DESeq2", "DT", "genefilter", "GenomicRanges", "ggplot2", "ggrepel", "GO_db", "GOstats", "heatmaply", "IRanges", "knitr", "limma", "NMF", "pheatmap", "plotly", "plyr", "rmarkdown", "S4Vectors", "scales", "shiny", "shinyAce", "shinyBS", "shinydashboard", "SummarizedExperiment", "threejs", "tidyr", "topGO"] + "depends": ["AnnotationDbi", "DESeq2", "DT", "GO_db", "GOstats", "GenomicRanges", "IRanges", "NMF", "S4Vectors", "SummarizedExperiment", "base64enc", "biomaRt", "genefilter", "ggplot2", "ggrepel", "heatmaply", "knitr", "limma", "pheatmap", "plotly", "plyr", "rmarkdown", "scales", "shiny", "shinyAce", "shinyBS", "shinydashboard", "threejs", "tidyr", "topGO"] }, "pcaMethods": { "name": "pcaMethods", @@ -10903,19 +10945,19 @@ "name": "pdInfoBuilder", "version": "1.68.0", "sha256": "1dcd0lscvywy5y5xfhfmn39n2iypjr4fjldfgmx8qa80b1d0xcbi", - "depends": ["affxparser", "Biobase", "BiocGenerics", "Biostrings", "DBI", "IRanges", "oligo", "oligoClasses", "RSQLite", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "affxparser", "oligo", "oligoClasses"] }, "peakPantheR": { "name": "peakPantheR", "version": "1.18.0", "sha256": "0rr8kmk6d4m7aipmz2pi2rzwxhxc600bk9r24fdgsw4kbh17fman", - "depends": ["bslib", "doParallel", "DT", "foreach", "ggplot2", "gridExtra", "lubridate", "minpack_lm", "MSnbase", "mzR", "pracma", "scales", "shiny", "shinycssloaders", "stringr", "svglite", "XML"] + "depends": ["DT", "MSnbase", "XML", "bslib", "doParallel", "foreach", "ggplot2", "gridExtra", "lubridate", "minpack_lm", "mzR", "pracma", "scales", "shiny", "shinycssloaders", "stringr", "svglite"] }, "peco": { "name": "peco", "version": "1.16.0", "sha256": "1w3yf77lk5whdhicq6rzp61cpivvkc0jj5wsasjxaqvl7lf1k6fs", - "depends": ["assertthat", "circular", "conicfit", "doParallel", "foreach", "genlasso", "scater", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["SingleCellExperiment", "SummarizedExperiment", "assertthat", "circular", "conicfit", "doParallel", "foreach", "genlasso", "scater"] }, "pengls": { "name": "pengls", @@ -10927,7 +10969,7 @@ "name": "pepStat", "version": "1.38.0", "sha256": "1k4nf5jlpcf7bgrv08mgd575gkp08sw9w7nzab7idizdz4pvqvj4", - "depends": ["Biobase", "data_table", "fields", "GenomicRanges", "ggplot2", "IRanges", "limma", "plyr"] + "depends": ["Biobase", "GenomicRanges", "IRanges", "data_table", "fields", "ggplot2", "limma", "plyr"] }, "pepXMLTab": { "name": "pepXMLTab", @@ -10939,7 +10981,7 @@ "name": "periodicDNA", "version": "1.14.0", "sha256": "1fx7kvgl9znzpz6i33zl6019m0r4jcwsvsycjwhqaz8g3b5k4z8q", - "depends": ["BiocParallel", "Biostrings", "BSgenome", "cowplot", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "rtracklayer", "S4Vectors", "zoo"] + "depends": ["BSgenome", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "cowplot", "ggplot2", "magrittr", "rtracklayer", "zoo"] }, "pfamAnalyzeR": { "name": "pfamAnalyzeR", @@ -10955,15 +10997,15 @@ }, "pgxRpi": { "name": "pgxRpi", - "version": "1.0.1", - "sha256": "063xyx9i6k06klb8zpq64ln77lyadz6m6h86krk4mfxfbn214v9b", - "depends": ["attempt", "circlize", "dplyr", "GenomicRanges", "ggplot2", "httr", "lubridate", "plyr", "S4Vectors", "SummarizedExperiment", "survival", "survminer"] + "version": "1.0.3", + "sha256": "18c5xpfyqjjj5vc3nnajwq5sq1w24lqqs4ik91vjw5qg41rbspy3", + "depends": ["GenomicRanges", "S4Vectors", "SummarizedExperiment", "attempt", "circlize", "dplyr", "ggplot2", "httr", "lubridate", "parallelly", "plyr", "survival", "survminer"] }, "phantasus": { "name": "phantasus", "version": "1.24.0", "sha256": "0gw7d8n4nb3rjari1zrdqqhdz0ca0mgw40yr56r3x3gsyqpjlzxa", - "depends": ["AnnotationDbi", "assertthat", "Biobase", "ccaPP", "config", "curl", "data_table", "DESeq2", "edgeR", "fgsea", "fs", "GEOquery", "ggplot2", "gtable", "htmltools", "httpuv", "httr", "jsonlite", "limma", "Matrix", "opencpu", "phantasusLite", "pheatmap", "protolite", "rhdf5", "rhdf5client", "Rook", "scales", "stringr", "svglite", "XML", "yaml"] + "depends": ["AnnotationDbi", "Biobase", "DESeq2", "GEOquery", "Matrix", "Rook", "XML", "assertthat", "ccaPP", "config", "curl", "data_table", "edgeR", "fgsea", "fs", "ggplot2", "gtable", "htmltools", "httpuv", "httr", "jsonlite", "limma", "opencpu", "phantasusLite", "pheatmap", "protolite", "rhdf5", "rhdf5client", "scales", "stringr", "svglite", "yaml"] }, "phantasusLite": { "name": "phantasusLite", @@ -10975,19 +11017,19 @@ "name": "phenoTest", "version": "1.52.0", "sha256": "1l5r19gksrbqsdl9v8r2f4hrsbsxbkircbp3rxiis5x6y17ca9hy", - "depends": ["annotate", "AnnotationDbi", "Biobase", "biomaRt", "BMA", "Category", "ellipse", "genefilter", "ggplot2", "gplots", "GSEABase", "Heatplus", "hgu133a_db", "Hmisc", "hopach", "limma", "mgcv", "survival", "xtable"] + "depends": ["AnnotationDbi", "BMA", "Biobase", "Category", "GSEABase", "Heatplus", "Hmisc", "annotate", "biomaRt", "ellipse", "genefilter", "ggplot2", "gplots", "hgu133a_db", "hopach", "limma", "mgcv", "survival", "xtable"] }, "phenomis": { "name": "phenomis", - "version": "1.6.0", - "sha256": "0d6kc034lbbsyvr30p0a1c3nrpa39kkpwjqbkdvm6cwvfyiaf3iy", - "depends": ["Biobase", "biodb", "biodbChebi", "data_table", "futile_logger", "ggplot2", "ggrepel", "htmlwidgets", "igraph", "limma", "MultiAssayExperiment", "MultiDataSet", "plotly", "PMCMRplus", "ranger", "RColorBrewer", "ropls", "SummarizedExperiment", "tibble", "tidyr", "VennDiagram"] + "version": "1.6.2", + "sha256": "06bwkhp503mqf8yyzqkl1sym8p6vl20sbb3ms9d5p81gnm87wg6q", + "depends": ["Biobase", "MultiAssayExperiment", "MultiDataSet", "PMCMRplus", "RColorBrewer", "SummarizedExperiment", "VennDiagram", "biodb", "biodbChebi", "data_table", "futile_logger", "ggplot2", "ggrepel", "htmlwidgets", "igraph", "limma", "plotly", "ranger", "ropls", "tibble", "tidyr"] }, "phenopath": { "name": "phenopath", "version": "1.28.0", "sha256": "073v6sxf3k10257npbmxxh6bvdjwnvk3zh1zq2yvm9jzg2n34i99", - "depends": ["dplyr", "ggplot2", "Rcpp", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["Rcpp", "SummarizedExperiment", "dplyr", "ggplot2", "tibble", "tidyr"] }, "philr": { "name": "philr", @@ -11005,7 +11047,7 @@ "name": "phyloseq", "version": "1.48.0", "sha256": "0a8q4wcqcxs7933bxg9bg03ps6hnybvcpqmlpz1pjy3affzghcbi", - "depends": ["ade4", "ape", "Biobase", "BiocGenerics", "biomformat", "Biostrings", "cluster", "data_table", "foreach", "ggplot2", "igraph", "multtest", "plyr", "reshape2", "scales", "vegan"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "ade4", "ape", "biomformat", "cluster", "data_table", "foreach", "ggplot2", "igraph", "multtest", "plyr", "reshape2", "scales", "vegan"] }, "piano": { "name": "piano", @@ -11023,13 +11065,13 @@ "name": "pipeComp", "version": "1.14.0", "sha256": "1wq7b5f5hdxg2q6av782dm2gmzzdx58ss7ns9vizyxli3k926p5n", - "depends": ["aricode", "BiocParallel", "circlize", "clue", "cluster", "ComplexHeatmap", "cowplot", "dplyr", "ggplot2", "intrinsicDimension", "knitr", "Matrix", "matrixStats", "randomcoloR", "RColorBrewer", "reshape2", "Rtsne", "S4Vectors", "scales", "scater", "scran", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "uwot", "viridisLite"] + "depends": ["BiocParallel", "ComplexHeatmap", "Matrix", "RColorBrewer", "Rtsne", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "aricode", "circlize", "clue", "cluster", "cowplot", "dplyr", "ggplot2", "intrinsicDimension", "knitr", "matrixStats", "randomcoloR", "reshape2", "scales", "scater", "scran", "uwot", "viridisLite"] }, "pipeFrame": { "name": "pipeFrame", "version": "1.20.0", "sha256": "12wi520dylsjmf3vzwsdqqfqgcz5g4znfs2n5sd9b4805smc8k8l", - "depends": ["Biostrings", "BSgenome", "digest", "GenomeInfoDb", "magrittr", "rmarkdown", "visNetwork"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "digest", "magrittr", "rmarkdown", "visNetwork"] }, "planet": { "name": "planet", @@ -11059,31 +11101,31 @@ "name": "plier", "version": "1.74.0", "sha256": "0svk8p4h212l3igfmrxhqi90xz74jicr5y780556k9bcj3jwqg5c", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "plotGrouper": { "name": "plotGrouper", "version": "1.22.0", "sha256": "169786jrqbcf8qhysar22cb5am2zh6j7w601k9784b4ywhxh3ac0", - "depends": ["colourpicker", "dplyr", "egg", "ggplot2", "ggpubr", "gridExtra", "gtable", "Hmisc", "magrittr", "readr", "readxl", "rlang", "scales", "shiny", "shinythemes", "stringr", "tibble", "tidyr"] + "depends": ["Hmisc", "colourpicker", "dplyr", "egg", "ggplot2", "ggpubr", "gridExtra", "gtable", "magrittr", "readr", "readxl", "rlang", "scales", "shiny", "shinythemes", "stringr", "tibble", "tidyr"] }, "plotgardener": { "name": "plotgardener", - "version": "1.10.1", - "sha256": "1pcjc4an5pspafb9pvmia73g8cdp6n2paz2m952p1xnwsp9ijsi7", - "depends": ["curl", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplotify", "IRanges", "plyranges", "purrr", "RColorBrewer", "Rcpp", "rlang", "strawr", "withr"] + "version": "1.10.2", + "sha256": "115j3fh9abdrlgf2dsd9jx4lja1pjfg0fh0if3vwg1gfv7qnzfrn", + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "Rcpp", "curl", "data_table", "dplyr", "ggplotify", "plyranges", "purrr", "rlang", "strawr", "withr"] }, "plyinteractions": { "name": "plyinteractions", "version": "1.2.0", "sha256": "095sb616r5xwcbqsgw4b7kiywl6lbwp6rbs80qymglpqkbywwp7j", - "depends": ["BiocGenerics", "dplyr", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "IRanges", "plyranges", "rlang", "S4Vectors", "tibble", "tidyselect"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "S4Vectors", "dplyr", "plyranges", "rlang", "tibble", "tidyselect"] }, "plyranges": { "name": "plyranges", "version": "1.24.0", "sha256": "0rh5l6bd80nhffqpnnc2c00mvp8p32ykld05h94c3y8c9mvmsl58", - "depends": ["BiocGenerics", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "magrittr", "rlang", "Rsamtools", "rtracklayer", "S4Vectors", "tidyselect"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "dplyr", "magrittr", "rlang", "rtracklayer", "tidyselect"] }, "pmm": { "name": "pmm", @@ -11095,37 +11137,37 @@ "name": "pmp", "version": "1.16.0", "sha256": "0ryjv1g63nzipym1ijln6nv2w5flv15030b9jp09ddi5p3hn5h1j", - "depends": ["ggplot2", "impute", "matrixStats", "missForest", "pcaMethods", "reshape2", "S4Vectors", "SummarizedExperiment"] + "depends": ["S4Vectors", "SummarizedExperiment", "ggplot2", "impute", "matrixStats", "missForest", "pcaMethods", "reshape2"] }, "podkat": { "name": "podkat", "version": "1.36.0", "sha256": "0bjan7w0mxylabvaf3c2nqv5yifddslhd4dh360il193qs07g72c", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "Rhtslib", "Rsamtools"] + "depends": ["BSgenome", "Biobase", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "Rhtslib", "Rsamtools"] }, "pogos": { "name": "pogos", "version": "1.24.0", "sha256": "1i5cmz5icgmd2xd9r19i6xr9v4nydqpydbf84c8ann07p0qyg5b3", - "depends": ["ggplot2", "httr", "ontoProc", "rjson", "S4Vectors", "shiny"] + "depends": ["S4Vectors", "ggplot2", "httr", "ontoProc", "rjson", "shiny"] }, "polyester": { "name": "polyester", "version": "1.39.0", "sha256": "0fw0qhmbygjq4ryspyqikb8rxfn33ks000j7sshgfg8hf2rmqg3x", - "depends": ["Biostrings", "IRanges", "limma", "logspline", "S4Vectors", "zlibbioc"] + "depends": ["Biostrings", "IRanges", "S4Vectors", "limma", "logspline", "zlibbioc"] }, "powerTCR": { "name": "powerTCR", "version": "1.24.0", "sha256": "04w6jhpc1vkqrm3dr5igp1iwkammmi53mqafjz694n379hamxrhg", - "depends": ["cubature", "doParallel", "evmix", "foreach", "magrittr", "purrr", "truncdist", "vegan", "VGAM"] + "depends": ["VGAM", "cubature", "doParallel", "evmix", "foreach", "magrittr", "purrr", "truncdist", "vegan"] }, "ppcseq": { "name": "ppcseq", "version": "1.12.0", "sha256": "0b8s29zhw3s3nbxf57fa9cixfdwx0q4d3g4b6bi35fsr0r90a44q", - "depends": ["benchmarkme", "BH", "dplyr", "edgeR", "foreach", "ggplot2", "lifecycle", "magrittr", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidybayes", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "benchmarkme", "dplyr", "edgeR", "foreach", "ggplot2", "lifecycle", "magrittr", "purrr", "rlang", "rstan", "rstantools", "tibble", "tidybayes", "tidyr"] }, "pqsfinder": { "name": "pqsfinder", @@ -11137,19 +11179,19 @@ "name": "pram", "version": "1.20.0", "sha256": "0cc74whwnjgf8svfps2i0c9n243rzq15ffdwdwdd986mwn6v5kvv", - "depends": ["BiocGenerics", "BiocParallel", "data_table", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "data_table", "rtracklayer"] }, "prebs": { "name": "prebs", "version": "1.44.0", "sha256": "0mzy2w5jq08370nl53ms2xadr46lc0hvlgv2kkw5ikjf58rsfgx7", - "depends": ["affy", "Biobase", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "RPA", "S4Vectors"] + "depends": ["Biobase", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "RPA", "S4Vectors", "affy"] }, "preciseTAD": { "name": "preciseTAD", "version": "1.14.0", "sha256": "0gxq07q8nv2h0j20vsjgbah8121l79sxjhjg9rf79r73pmm1733f", - "depends": ["caret", "cluster", "dbscan", "doSNOW", "e1071", "foreach", "GenomicRanges", "gtools", "IRanges", "ModelMetrics", "pbapply", "pROC", "PRROC", "randomForest", "rCGH", "S4Vectors"] + "depends": ["GenomicRanges", "IRanges", "ModelMetrics", "PRROC", "S4Vectors", "caret", "cluster", "dbscan", "doSNOW", "e1071", "foreach", "gtools", "pROC", "pbapply", "rCGH", "randomForest"] }, "preprocessCore": { "name": "preprocessCore", @@ -11161,13 +11203,13 @@ "name": "primirTSS", "version": "1.22.0", "sha256": "1c932ynp5rsymz6z7m9v38fwm30gja7z60yq3xjwj6gxw1rf7sy5", - "depends": ["BiocGenerics", "Biostrings", "BSgenome_Hsapiens_UCSC_hg38", "dplyr", "GenomicRanges", "GenomicScores", "Gviz", "IRanges", "JASPAR2018", "phastCons100way_UCSC_hg38", "purrr", "R_utils", "rtracklayer", "S4Vectors", "shiny", "stringr", "TFBSTools", "tibble", "tidyr"] + "depends": ["BSgenome_Hsapiens_UCSC_hg38", "BiocGenerics", "Biostrings", "GenomicRanges", "GenomicScores", "Gviz", "IRanges", "JASPAR2018", "R_utils", "S4Vectors", "TFBSTools", "dplyr", "phastCons100way_UCSC_hg38", "purrr", "rtracklayer", "shiny", "stringr", "tibble", "tidyr"] }, "proActiv": { "name": "proActiv", "version": "1.14.0", "sha256": "1x70jjym4220vkwzhr2cn4hjxvxdh2mhwfyd8rp3wp6gh7d9q87a", - "depends": ["AnnotationDbi", "BiocParallel", "data_table", "DESeq2", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "gplots", "IRanges", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "tibble", "txdbmaker"] + "depends": ["AnnotationDbi", "BiocParallel", "DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "ggplot2", "gplots", "rlang", "scales", "tibble", "txdbmaker"] }, "proBAMr": { "name": "proBAMr", @@ -11179,13 +11221,13 @@ "name": "proDA", "version": "1.18.0", "sha256": "1h3695q4al7pr3q1vj1qfiig6c5lhljxlvxpfbv6k0h987ha1fiw", - "depends": ["BiocGenerics", "extraDistr", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "S4Vectors", "SummarizedExperiment", "extraDistr"] }, "procoil": { "name": "procoil", "version": "2.32.0", "sha256": "02p8dy3gi86zp5z842sjx3rcy8a7kvji8mg4xw5krzz4pkzjjk8y", - "depends": ["Biostrings", "kebabs", "S4Vectors"] + "depends": ["Biostrings", "S4Vectors", "kebabs"] }, "profileScoreDist": { "name": "profileScoreDist", @@ -11197,7 +11239,7 @@ "name": "profileplyr", "version": "1.20.0", "sha256": "1gpjmkn1s509smaal15rg3629y69vnxifhyfd8xa65x7m9v1fvbc", - "depends": ["BiocGenerics", "BiocParallel", "ChIPseeker", "circlize", "ComplexHeatmap", "dplyr", "EnrichedHeatmap", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "org_Hs_eg_db", "org_Mm_eg_db", "pheatmap", "R_utils", "rGREAT", "rjson", "rlang", "Rsamtools", "rtracklayer", "S4Vectors", "soGGi", "SummarizedExperiment", "tidyr", "tiff", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "TxDb_Mmusculus_UCSC_mm9_knownGene"] + "depends": ["BiocGenerics", "BiocParallel", "ChIPseeker", "ComplexHeatmap", "EnrichedHeatmap", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "R_utils", "Rsamtools", "S4Vectors", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "TxDb_Mmusculus_UCSC_mm9_knownGene", "circlize", "dplyr", "ggplot2", "magrittr", "org_Hs_eg_db", "org_Mm_eg_db", "pheatmap", "rGREAT", "rjson", "rlang", "rtracklayer", "soGGi", "tidyr", "tiff"] }, "progeny": { "name": "progeny", @@ -11209,13 +11251,13 @@ "name": "projectR", "version": "1.20.0", "sha256": "1c9v4iw8s4hm7wjdv3ir6df0yskz95b0wnpljiph4zv4h22q32ac", - "depends": ["cluster", "cowplot", "dplyr", "fgsea", "ggalluvial", "ggplot2", "ggrepel", "limma", "Matrix", "MatrixModels", "msigdbr", "NMF", "RColorBrewer", "reshape2", "ROCR", "scales", "tsne", "umap", "viridis"] + "depends": ["Matrix", "MatrixModels", "NMF", "RColorBrewer", "ROCR", "cluster", "cowplot", "dplyr", "fgsea", "ggalluvial", "ggplot2", "ggrepel", "limma", "msigdbr", "reshape2", "scales", "tsne", "umap", "viridis"] }, "protGear": { "name": "protGear", "version": "1.8.0", "sha256": "1wbdp7f55lbn0gcxgnp9xk0y5npn7jmk9vp7yq9v76j7f396vj2f", - "depends": ["Biobase", "data_table", "dplyr", "factoextra", "FactoMineR", "flexdashboard", "genefilter", "GGally", "ggplot2", "ggpubr", "gtools", "htmltools", "Kendall", "knitr", "limma", "magrittr", "MASS", "pheatmap", "plotly", "plyr", "purrr", "readr", "remotes", "rlang", "rmarkdown", "shiny", "shinydashboard", "styler", "tibble", "tidyr", "vsn"] + "depends": ["Biobase", "FactoMineR", "GGally", "Kendall", "MASS", "data_table", "dplyr", "factoextra", "flexdashboard", "genefilter", "ggplot2", "ggpubr", "gtools", "htmltools", "knitr", "limma", "magrittr", "pheatmap", "plotly", "plyr", "purrr", "readr", "remotes", "rlang", "rmarkdown", "shiny", "shinydashboard", "styler", "tibble", "tidyr", "vsn"] }, "proteinProfiles": { "name": "proteinProfiles", @@ -11227,43 +11269,43 @@ "name": "psichomics", "version": "1.30.0", "sha256": "0nwfaw1a4mxdzqk0zqadxispdasx75nlb19zla753nmydxlpavj0", - "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "cluster", "colourpicker", "data_table", "digest", "dplyr", "DT", "edgeR", "fastICA", "fastmatch", "ggplot2", "ggrepel", "highcharter", "htmltools", "httr", "jsonlite", "limma", "pairsD3", "plyr", "purrr", "R_utils", "Rcpp", "recount", "reshape2", "Rfast", "shiny", "shinyBS", "shinyjs", "stringr", "SummarizedExperiment", "survival", "XML", "xtable"] + "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "DT", "R_utils", "Rcpp", "Rfast", "SummarizedExperiment", "XML", "cluster", "colourpicker", "data_table", "digest", "dplyr", "edgeR", "fastICA", "fastmatch", "ggplot2", "ggrepel", "highcharter", "htmltools", "httr", "jsonlite", "limma", "pairsD3", "plyr", "purrr", "recount", "reshape2", "shiny", "shinyBS", "shinyjs", "stringr", "survival", "xtable"] }, "psygenet2r": { "name": "psygenet2r", "version": "1.36.0", "sha256": "1khjid5lkkn5qpnk9adw1in4km41q067mj5r5yqs2iz5hv4vx6xv", - "depends": ["BgeeDB", "Biobase", "biomaRt", "ggplot2", "GO_db", "igraph", "labeling", "RCurl", "reshape2", "stringr", "topGO"] + "depends": ["BgeeDB", "Biobase", "GO_db", "RCurl", "biomaRt", "ggplot2", "igraph", "labeling", "reshape2", "stringr", "topGO"] }, "ptairMS": { "name": "ptairMS", "version": "1.12.0", "sha256": "0r0h4mdvhbrr3j78qzdcfw7q5q492wx9v78rg2xzw59ynqbyv3gg", - "depends": ["Biobase", "bit64", "chron", "data_table", "doParallel", "DT", "enviPat", "foreach", "ggplot2", "ggpubr", "gridExtra", "Hmisc", "minpack_lm", "MSnbase", "plotly", "Rcpp", "rhdf5", "rlang", "scales", "shiny", "shinyscreenshot", "signal"] + "depends": ["Biobase", "DT", "Hmisc", "MSnbase", "Rcpp", "bit64", "chron", "data_table", "doParallel", "enviPat", "foreach", "ggplot2", "ggpubr", "gridExtra", "minpack_lm", "plotly", "rhdf5", "rlang", "scales", "shiny", "shinyscreenshot", "signal"] }, "puma": { "name": "puma", "version": "3.46.0", "sha256": "1l6xvj6l9f5kmff3a5q7vzf2sssyhkqpa4im46g53jhkindbqwg6", - "depends": ["affy", "affyio", "Biobase", "mclust", "oligo", "oligoClasses"] + "depends": ["Biobase", "affy", "affyio", "mclust", "oligo", "oligoClasses"] }, "pvac": { "name": "pvac", "version": "1.52.0", "sha256": "132hvlnp3cfxazvf0wq1q5v00q5x79fg60r7vsx07wi1vkjba3wg", - "depends": ["affy", "Biobase"] + "depends": ["Biobase", "affy"] }, "pvca": { "name": "pvca", "version": "1.44.0", "sha256": "0bk1nrjhn78wcbcawz8bx2lm3y45mhfv22yrrlxrz91sah9jjw27", - "depends": ["Biobase", "lme4", "Matrix", "vsn"] + "depends": ["Biobase", "Matrix", "lme4", "vsn"] }, "pwOmics": { "name": "pwOmics", "version": "1.36.0", "sha256": "00c198vm7zzsq2a43c6iar5937556s65183wk1k7wy1zl8vqi8vg", - "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocGenerics", "biomaRt", "data_table", "GenomicRanges", "gplots", "graph", "igraph", "rBiopaxParser", "STRINGdb"] + "depends": ["AnnotationDbi", "AnnotationHub", "Biobase", "BiocGenerics", "GenomicRanges", "STRINGdb", "biomaRt", "data_table", "gplots", "graph", "igraph", "rBiopaxParser"] }, "pwalign": { "name": "pwalign", @@ -11275,43 +11317,43 @@ "name": "qPLEXanalyzer", "version": "1.22.0", "sha256": "15cmfrp1hilqqkkxphd4lbqmk4mgv3s8ky76bnidfv58qc5pa940", - "depends": ["assertthat", "Biobase", "BiocGenerics", "Biostrings", "dplyr", "ggdendro", "ggplot2", "IRanges", "limma", "magrittr", "MSnbase", "preprocessCore", "purrr", "RColorBrewer", "readr", "rlang", "scales", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "IRanges", "MSnbase", "RColorBrewer", "assertthat", "dplyr", "ggdendro", "ggplot2", "limma", "magrittr", "preprocessCore", "purrr", "readr", "rlang", "scales", "stringr", "tibble", "tidyr", "tidyselect"] }, "qckitfastq": { "name": "qckitfastq", "version": "1.20.0", "sha256": "0wb6r4mdh3zf3hic88cn9s22s0dn7h65gl4djwrcl5sm5b1a6sxm", - "depends": ["data_table", "dplyr", "ggplot2", "magrittr", "Rcpp", "reshape2", "rlang", "RSeqAn", "seqTools", "zlibbioc"] + "depends": ["RSeqAn", "Rcpp", "data_table", "dplyr", "ggplot2", "magrittr", "reshape2", "rlang", "seqTools", "zlibbioc"] }, "qcmetrics": { "name": "qcmetrics", "version": "1.42.0", "sha256": "0r7c67bjf9j7r9yciljx2sgnarrjaf1gazf6n8rjjar2jfmrsmrm", - "depends": ["Biobase", "knitr", "pander", "S4Vectors", "xtable"] + "depends": ["Biobase", "S4Vectors", "knitr", "pander", "xtable"] }, "qmtools": { "name": "qmtools", "version": "1.8.0", "sha256": "1w0kd1kawf0w4rmlz8pfnabagrjvnyql2bcs2f7nl7sp6q7sfvni", - "depends": ["ggplot2", "heatmaply", "igraph", "limma", "MsCoreUtils", "patchwork", "rlang", "scales", "SummarizedExperiment", "VIM"] + "depends": ["MsCoreUtils", "SummarizedExperiment", "VIM", "ggplot2", "heatmaply", "igraph", "limma", "patchwork", "rlang", "scales"] }, "qpcrNorm": { "name": "qpcrNorm", "version": "1.62.0", "sha256": "1rcs9p5y50ynwmpxqwhigh9qxgs54shrglzjnakq08j24hxkyd2h", - "depends": ["affy", "Biobase", "limma"] + "depends": ["Biobase", "affy", "limma"] }, "qpgraph": { "name": "qpgraph", "version": "2.38.0", "sha256": "040haanlhmd11isghcrdidf2nal4195kskp0q8965x41fbdvsx37", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocParallel", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "graph", "IRanges", "Matrix", "mvtnorm", "qtl", "Rgraphviz", "S4Vectors"] + "depends": ["AnnotationDbi", "Biobase", "BiocParallel", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rgraphviz", "S4Vectors", "annotate", "graph", "mvtnorm", "qtl"] }, "qsea": { "name": "qsea", "version": "1.30.0", "sha256": "141fi7zk9czr4j1d0y1hk1hz33nq3k79cdkawp0x92nvja1n9njd", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "gtools", "HMMcopy", "IRanges", "limma", "Rsamtools", "rtracklayer", "S4Vectors", "zoo"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicRanges", "HMMcopy", "IRanges", "Rsamtools", "S4Vectors", "gtools", "limma", "rtracklayer", "zoo"] }, "qsmooth": { "name": "qsmooth", @@ -11323,19 +11365,19 @@ "name": "qsvaR", "version": "1.8.0", "sha256": "1ijmh0mby6j50icwlcfhn416x0cjj5y0v3qqjmcn4hx6395m90ma", - "depends": ["ggplot2", "SummarizedExperiment", "sva"] + "depends": ["SummarizedExperiment", "ggplot2", "sva"] }, "quantiseqr": { "name": "quantiseqr", "version": "1.12.0", "sha256": "0d1afsz7hv4ixpicskzw564cq593jcfkix7rryq5lbj27rz5da3c", - "depends": ["Biobase", "ggplot2", "limSolve", "MASS", "preprocessCore", "rlang", "SummarizedExperiment", "tidyr"] + "depends": ["Biobase", "MASS", "SummarizedExperiment", "ggplot2", "limSolve", "preprocessCore", "rlang", "tidyr"] }, "quantro": { "name": "quantro", "version": "1.38.0", "sha256": "0b8afvnczkhmbdg5zna2h5v42zdyvk1zybn9cwcbw22rijiysq99", - "depends": ["Biobase", "doParallel", "foreach", "ggplot2", "iterators", "minfi", "RColorBrewer"] + "depends": ["Biobase", "RColorBrewer", "doParallel", "foreach", "ggplot2", "iterators", "minfi"] }, "quantsmooth": { "name": "quantsmooth", @@ -11359,7 +11401,7 @@ "name": "r3Cseq", "version": "1.50.0", "sha256": "02dc6milwymwj90x24fip8av84ik9dp69sg9g7l300kwyk0hcrb7", - "depends": ["Biostrings", "data_table", "GenomeInfoDb", "GenomicRanges", "IRanges", "qvalue", "RColorBrewer", "Rsamtools", "rtracklayer", "sqldf", "VGAM"] + "depends": ["Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "VGAM", "data_table", "qvalue", "rtracklayer", "sqldf"] }, "rBLAST": { "name": "rBLAST", @@ -11371,13 +11413,13 @@ "name": "rBiopaxParser", "version": "2.44.0", "sha256": "0hzs6i7l8n1hifj3b91n1f6z3l40jdcl1jlnz8z5qczk84266lx2", - "depends": ["data_table", "XML"] + "depends": ["XML", "data_table"] }, "rCGH": { "name": "rCGH", "version": "1.34.0", "sha256": "0241nrg1kcc6vxj1p6pp5gyjff7k3mdsr764bn3zxvh1wqjnvfrm", - "depends": ["aCGH", "affy", "AnnotationDbi", "DNAcopy", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "lattice", "limma", "mclust", "org_Hs_eg_db", "plyr", "shiny", "TxDb_Hsapiens_UCSC_hg18_knownGene", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["AnnotationDbi", "DNAcopy", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "TxDb_Hsapiens_UCSC_hg18_knownGene", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "aCGH", "affy", "ggplot2", "lattice", "limma", "mclust", "org_Hs_eg_db", "plyr", "shiny"] }, "rDGIdb": { "name": "rDGIdb", @@ -11389,19 +11431,19 @@ "name": "rGADEM", "version": "2.52.0", "sha256": "1d1vfnxj1p4y1074ybmkxv4x3v0i3sn5w3k4bddzlrqbzyb9kkna", - "depends": ["Biostrings", "BSgenome", "GenomicRanges", "IRanges", "seqLogo"] + "depends": ["BSgenome", "Biostrings", "GenomicRanges", "IRanges", "seqLogo"] }, "rGREAT": { "name": "rGREAT", "version": "2.6.0", "sha256": "0sszyfnnzzn5xhs39zgkzr7f3da820nxr6qaw68wknblgmyyddi8", - "depends": ["AnnotationDbi", "circlize", "digest", "doParallel", "DT", "foreach", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GetoptLong", "GlobalOptions", "GO_db", "IRanges", "org_Hs_eg_db", "progress", "RColorBrewer", "Rcpp", "RCurl", "rjson", "S4Vectors", "shiny", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["AnnotationDbi", "DT", "GO_db", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "GetoptLong", "GlobalOptions", "IRanges", "RColorBrewer", "RCurl", "Rcpp", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "circlize", "digest", "doParallel", "foreach", "org_Hs_eg_db", "progress", "rjson", "shiny"] }, "rGenomeTracks": { "name": "rGenomeTracks", "version": "1.10.0", "sha256": "0a34xdmpj1872vxhd9a2k1rbzgvsmhisyy2pknbz606924k13xnz", - "depends": ["imager", "reticulate", "rGenomeTracksData"] + "depends": ["imager", "rGenomeTracksData", "reticulate"] }, "rRDP": { "name": "rRDP", @@ -11419,13 +11461,13 @@ "name": "rScudo", "version": "1.20.0", "sha256": "0mhhv5p1z334qn92bql4rsd8p0xpnhd26kzahwi4wqkkb6yqbn8y", - "depends": ["Biobase", "BiocGenerics", "igraph", "S4Vectors", "stringr", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "S4Vectors", "SummarizedExperiment", "igraph", "stringr"] }, "rTRM": { "name": "rTRM", "version": "1.42.0", "sha256": "016vhij3rc6sbhi7caxxnpps4w0w2n28x4hqwdxkxk6r0f6kkvla", - "depends": ["AnnotationDbi", "DBI", "igraph", "RSQLite"] + "depends": ["AnnotationDbi", "DBI", "RSQLite", "igraph"] }, "rTRMui": { "name": "rTRMui", @@ -11437,13 +11479,13 @@ "name": "rWikiPathways", "version": "1.24.0", "sha256": "1m6djs70h58xs4323vp65j33i8mzql2sps9l04pgp28cs17yr4mc", - "depends": ["data_table", "dplyr", "httr", "lubridate", "purrr", "RCurl", "readr", "rjson", "stringr", "tidyr", "XML"] + "depends": ["RCurl", "XML", "data_table", "dplyr", "httr", "lubridate", "purrr", "readr", "rjson", "stringr", "tidyr"] }, "raer": { "name": "raer", "version": "1.2.0", "sha256": "0fxc1i3p1ha0yn6s5c334q2bv7mfwjd3yvlvss6whi16vi63kbwj", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "BSgenome", "cli", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rhtslib", "Rsamtools", "rtracklayer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BSgenome", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "Rhtslib", "Rsamtools", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cli", "rtracklayer"] }, "rain": { "name": "rain", @@ -11455,13 +11497,13 @@ "name": "ramr", "version": "1.12.0", "sha256": "096rxydr9qilg4lcczab1xlzv5ff2lq9r5l6bdzyhprm07mglc80", - "depends": ["BiocGenerics", "doParallel", "doRNG", "EnvStats", "ExtDist", "foreach", "GenomicRanges", "ggplot2", "IRanges", "matrixStats", "reshape2", "S4Vectors"] + "depends": ["BiocGenerics", "EnvStats", "ExtDist", "GenomicRanges", "IRanges", "S4Vectors", "doParallel", "doRNG", "foreach", "ggplot2", "matrixStats", "reshape2"] }, "ramwas": { "name": "ramwas", "version": "1.28.0", "sha256": "0azf24qvjy2dfizi0wp7lkrhjdm2xwwk6hmkg31ly501cjd4pn9s", - "depends": ["BiocGenerics", "biomaRt", "Biostrings", "digest", "filematrix", "GenomicAlignments", "glmnet", "KernSmooth", "Rsamtools"] + "depends": ["BiocGenerics", "Biostrings", "GenomicAlignments", "KernSmooth", "Rsamtools", "biomaRt", "digest", "filematrix", "glmnet"] }, "randPack": { "name": "randPack", @@ -11509,67 +11551,67 @@ "name": "receptLoss", "version": "1.16.0", "sha256": "1c110rpfbi6rgl97659qx5qyj6wp6sqzddpnjg3bir21nh6902fl", - "depends": ["dplyr", "ggplot2", "magrittr", "SummarizedExperiment", "tidyr"] + "depends": ["SummarizedExperiment", "dplyr", "ggplot2", "magrittr", "tidyr"] }, "reconsi": { "name": "reconsi", "version": "1.16.0", "sha256": "13xviw2qn8sk7ka6qskb39dsv9qz4vkfdydpzzvm14y6iy62zgzr", - "depends": ["ggplot2", "ks", "Matrix", "matrixStats", "phyloseq", "reshape2"] + "depends": ["Matrix", "ggplot2", "ks", "matrixStats", "phyloseq", "reshape2"] }, "recount": { "name": "recount", "version": "1.30.2", "sha256": "0fdnp0ilvxkzyzwblbchf6ns1v6fah32zyg3y68pz88ir5nwg49b", - "depends": ["BiocParallel", "derfinder", "downloader", "GenomeInfoDb", "GenomicRanges", "GEOquery", "IRanges", "RCurl", "rentrez", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocParallel", "GEOquery", "GenomeInfoDb", "GenomicRanges", "IRanges", "RCurl", "S4Vectors", "SummarizedExperiment", "derfinder", "downloader", "rentrez", "rtracklayer"] }, "recount3": { "name": "recount3", "version": "1.14.0", "sha256": "1dmc5s5mw95caq2pqpgik5z5nggy5mnas1dawssiyhr10wivnjd0", - "depends": ["BiocFileCache", "data_table", "GenomicRanges", "httr", "Matrix", "R_utils", "rtracklayer", "S4Vectors", "sessioninfo", "SummarizedExperiment"] + "depends": ["BiocFileCache", "GenomicRanges", "Matrix", "R_utils", "S4Vectors", "SummarizedExperiment", "data_table", "httr", "rtracklayer", "sessioninfo"] }, "recountmethylation": { "name": "recountmethylation", "version": "1.14.0", "sha256": "0cbp1cz6h1djwgrv2achgypmxiracrjm8y8sj1f9iqy6i1fgq8jl", - "depends": ["basilisk", "BiocFileCache", "DelayedMatrixStats", "HDF5Array", "minfi", "R_utils", "RCurl", "reticulate", "rhdf5", "S4Vectors"] + "depends": ["BiocFileCache", "DelayedMatrixStats", "HDF5Array", "RCurl", "R_utils", "S4Vectors", "basilisk", "minfi", "reticulate", "rhdf5"] }, "recoup": { "name": "recoup", "version": "1.32.0", "sha256": "07313l0b78x0m0vp8ipngzv069v7vjgr8q7vv4j9kbr33kql3bp6", - "depends": ["BiocGenerics", "biomaRt", "Biostrings", "circlize", "ComplexHeatmap", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "httr", "IRanges", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "stringr", "txdbmaker"] + "depends": ["BiocGenerics", "Biostrings", "ComplexHeatmap", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "Rsamtools", "S4Vectors", "biomaRt", "circlize", "ggplot2", "httr", "rtracklayer", "stringr", "txdbmaker"] }, "regionReport": { "name": "regionReport", "version": "1.38.0", "sha256": "1nxs0slhhnxpjg220irf0a6hsh1zp0xh54ffpvl25lzgy422xwpp", - "depends": ["BiocStyle", "DEFormats", "derfinder", "DESeq2", "GenomeInfoDb", "GenomicRanges", "knitr", "knitrBootstrap", "RefManageR", "rmarkdown", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocStyle", "DEFormats", "DESeq2", "GenomeInfoDb", "GenomicRanges", "RefManageR", "S4Vectors", "SummarizedExperiment", "derfinder", "knitr", "knitrBootstrap", "rmarkdown"] }, "regionalpcs": { "name": "regionalpcs", "version": "1.2.0", "sha256": "1hrmxb2ag0d823kn3ya07rwgfv931x2shqzdq3q310rw9jllcwgd", - "depends": ["dplyr", "GenomicRanges", "PCAtools", "tibble"] + "depends": ["GenomicRanges", "PCAtools", "dplyr", "tibble"] }, "regioneR": { "name": "regioneR", "version": "1.36.0", "sha256": "1ygdlqvhf165mqd247783pi1yzidqap8b913444vrs881n62xvrb", - "depends": ["Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "memoise", "rtracklayer", "S4Vectors"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "memoise", "rtracklayer"] }, "regioneReloaded": { "name": "regioneReloaded", "version": "1.6.0", "sha256": "1yi97sarqljayqm5lwci0z768qk0vzqiazpx8j6lvpsqhrsgmcry", - "depends": ["cluster", "ggplot2", "ggrepel", "RColorBrewer", "regioneR", "reshape2", "Rtsne", "scales", "umap"] + "depends": ["RColorBrewer", "Rtsne", "cluster", "ggplot2", "ggrepel", "regioneR", "reshape2", "scales", "umap"] }, "regsplice": { "name": "regsplice", "version": "1.30.0", "sha256": "0cmqigb2klpq7nqvhmvmyf9xzgjfvw22zpgpcjnlv24ga30sacak", - "depends": ["edgeR", "glmnet", "limma", "pbapply", "S4Vectors", "SummarizedExperiment"] + "depends": ["S4Vectors", "SummarizedExperiment", "edgeR", "glmnet", "limma", "pbapply"] }, "regutools": { "name": "regutools", @@ -11587,43 +11629,43 @@ "name": "rexposome", "version": "1.26.0", "sha256": "13ivwypcw58bmlrps16anhxf0dxk8v16wyadwz4wds4rd0ihjvcz", - "depends": ["Biobase", "circlize", "corrplot", "FactoMineR", "ggplot2", "ggrepel", "ggridges", "glmnet", "gplots", "gridExtra", "gtools", "Hmisc", "imputeLCMD", "lme4", "lsr", "mice", "pryr", "reshape2", "S4Vectors", "scales", "scatterplot3d", "stringr"] + "depends": ["Biobase", "FactoMineR", "Hmisc", "S4Vectors", "circlize", "corrplot", "ggplot2", "ggrepel", "ggridges", "glmnet", "gplots", "gridExtra", "gtools", "imputeLCMD", "lme4", "lsr", "mice", "pryr", "reshape2", "scales", "scatterplot3d", "stringr"] }, "rfPred": { "name": "rfPred", "version": "1.42.0", "sha256": "02clazsix7n4nnz1kn7hkk48fggxp2bqf97xbzngnljskvlhnakb", - "depends": ["data_table", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "data_table"] }, "rfaRm": { "name": "rfaRm", "version": "1.16.0", "sha256": "1c8kpcbwkz33cbc8xqfd5cqj1n979a9ijbj06nfgylkm71ma1682", - "depends": ["Biostrings", "data_table", "httr", "IRanges", "jsonlite", "magick", "rsvg", "rvest", "S4Vectors", "stringi", "xml2"] + "depends": ["Biostrings", "IRanges", "S4Vectors", "data_table", "httr", "jsonlite", "magick", "rsvg", "rvest", "stringi", "xml2"] }, "rgoslin": { "name": "rgoslin", "version": "1.8.0", "sha256": "0saxw5kppcw0hwjykgzx8873izbl509hq1ga8w9qg2c5zx5xahk9", - "depends": ["dplyr", "Rcpp"] + "depends": ["Rcpp", "dplyr"] }, "rgsepd": { "name": "rgsepd", "version": "1.36.0", "sha256": "18r2naxir299k0gcd9j3a5rvdma590m06v38j8wiligsgw5cmkfg", - "depends": ["AnnotationDbi", "biomaRt", "DESeq2", "GO_db", "goseq", "gplots", "org_Hs_eg_db", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "DESeq2", "GO_db", "SummarizedExperiment", "biomaRt", "goseq", "gplots", "org_Hs_eg_db"] }, "rhdf5": { "name": "rhdf5", "version": "2.48.0", "sha256": "086bnwzmlwq3z9a4kb1rnzb2wnchhi4gvzpijhladgd83nqyb0wn", - "depends": ["rhdf5filters", "Rhdf5lib"] + "depends": ["Rhdf5lib", "rhdf5filters"] }, "rhdf5client": { "name": "rhdf5client", "version": "1.26.0", "sha256": "17c8r361za3760lkik2b88c3m8zska33qam2iwbl5hw9yhkrl6ck", - "depends": ["data_table", "DelayedArray", "httr", "rjson"] + "depends": ["DelayedArray", "data_table", "httr", "rjson"] }, "rhdf5filters": { "name": "rhdf5filters", @@ -11635,31 +11677,31 @@ "name": "riboSeqR", "version": "1.38.0", "sha256": "0p0q28n8hlai80pxxns9pzzg552pbwlxlph8zjf78bwbjagrfbz5", - "depends": ["abind", "baySeq", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "seqLogo"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "abind", "baySeq", "seqLogo"] }, "ribor": { "name": "ribor", "version": "1.16.0", "sha256": "0kymbmm96a7ccl0dz46sk0lzgf3n55qvdkywkj91kh0ddrsji0vi", - "depends": ["dplyr", "ggplot2", "hash", "rhdf5", "rlang", "S4Vectors", "tidyr", "yaml"] + "depends": ["S4Vectors", "dplyr", "ggplot2", "hash", "rhdf5", "rlang", "tidyr", "yaml"] }, "ribosomeProfilingQC": { "name": "ribosomeProfilingQC", "version": "1.16.0", "sha256": "0bblk7ncxdrbgmgcjvif9zgd1ynlh4205vlmgr42jbg5p1i7p3in", - "depends": ["AnnotationDbi", "BiocGenerics", "Biostrings", "BSgenome", "cluster", "EDASeq", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggExtra", "ggfittext", "ggplot2", "ggrepel", "IRanges", "motifStack", "Rsamtools", "Rsubread", "rtracklayer", "RUVSeq", "S4Vectors", "scales", "txdbmaker", "XVector"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "Biostrings", "EDASeq", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "RUVSeq", "Rsamtools", "Rsubread", "S4Vectors", "XVector", "cluster", "ggExtra", "ggfittext", "ggplot2", "ggrepel", "motifStack", "rtracklayer", "scales", "txdbmaker"] }, "rifi": { "name": "rifi", "version": "1.8.0", "sha256": "0yajsqm27zy5imb719x8knsrn9rk85q98wc65xqmvj9bkqkjfvdl", - "depends": ["car", "cowplot", "doMC", "dplyr", "egg", "foreach", "ggplot2", "nls2", "nnet", "reshape2", "rlang", "rtracklayer", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble"] + "depends": ["S4Vectors", "SummarizedExperiment", "car", "cowplot", "doMC", "dplyr", "egg", "foreach", "ggplot2", "nls2", "nnet", "reshape2", "rlang", "rtracklayer", "scales", "stringr", "tibble"] }, "rifiComparative": { "name": "rifiComparative", "version": "1.4.0", "sha256": "0isgcbmk7c99xhlasaaa2gyjf9827zfdq1vyf4xc21lyhv9q5j51", - "depends": ["cowplot", "devtools", "doMC", "dplyr", "DTA", "egg", "foreach", "ggplot2", "ggrepel", "LSD", "nnet", "reshape2", "rlang", "rtracklayer", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tibble", "writexl"] + "depends": ["DTA", "LSD", "S4Vectors", "SummarizedExperiment", "cowplot", "devtools", "doMC", "dplyr", "egg", "foreach", "ggplot2", "ggrepel", "nnet", "reshape2", "rlang", "rtracklayer", "scales", "stringr", "tibble", "writexl"] }, "rmelting": { "name": "rmelting", @@ -11677,7 +11719,7 @@ "name": "rnaEditr", "version": "1.14.0", "sha256": "1jghirl1iz11wm4sq8qvw2fvgha7q6ili6bddgpdfcn07abbkcsm", - "depends": ["BiocGenerics", "bumphunter", "corrplot", "GenomeInfoDb", "GenomicRanges", "IRanges", "logistf", "plyr", "S4Vectors", "survival"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "bumphunter", "corrplot", "logistf", "plyr", "survival"] }, "rnaseqcomp": { "name": "rnaseqcomp", @@ -11689,13 +11731,13 @@ "name": "roar", "version": "1.40.0", "sha256": "06d1w5kknm2mb6v6glmyd97n1a33529kgqkkyfbk277ikn45hi9f", - "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "rtracklayer"] }, "roastgsa": { "name": "roastgsa", "version": "1.2.0", "sha256": "00rxmlx94y03mkz5jbwqx4px1cwv63nblhj2yxidy2k5374fk7fy", - "depends": ["Biobase", "ggplot2", "gplots", "limma", "RColorBrewer"] + "depends": ["Biobase", "RColorBrewer", "ggplot2", "gplots", "limma"] }, "rols": { "name": "rols", @@ -11707,31 +11749,31 @@ "name": "ropls", "version": "1.36.0", "sha256": "0cdkwzrbr6h1dfi3qdh629hi2jlm1hxgq4dvx4z3vc2r6w0c6m11", - "depends": ["Biobase", "ggplot2", "MultiAssayExperiment", "MultiDataSet", "plotly", "SummarizedExperiment"] + "depends": ["Biobase", "MultiAssayExperiment", "MultiDataSet", "SummarizedExperiment", "ggplot2", "plotly"] }, "rprimer": { "name": "rprimer", "version": "1.8.0", "sha256": "04maldspcfzszvbgvzq4fmaf62639kb2rs2dqm9r9miqqxqndkr3", - "depends": ["Biostrings", "bslib", "DT", "ggplot2", "IRanges", "mathjaxr", "patchwork", "reshape2", "S4Vectors", "shiny", "shinycssloaders", "shinyFeedback"] + "depends": ["Biostrings", "DT", "IRanges", "S4Vectors", "bslib", "ggplot2", "mathjaxr", "patchwork", "reshape2", "shiny", "shinyFeedback", "shinycssloaders"] }, "rpx": { "name": "rpx", "version": "2.12.0", "sha256": "1a3rh2f9wwgcgadgb5ryj8vs9kcyhqwz7wdnykv2pl3pgm8ba2zp", - "depends": ["BiocFileCache", "curl", "jsonlite", "RCurl", "xml2"] + "depends": ["BiocFileCache", "RCurl", "curl", "jsonlite", "xml2"] }, "rqubic": { "name": "rqubic", "version": "1.50.0", "sha256": "1hr0i7f8987x79ir34yg65bzkd7lij03rkfmw6dr289d8kjclap2", - "depends": ["biclust", "Biobase", "BiocGenerics"] + "depends": ["Biobase", "BiocGenerics", "biclust"] }, "rrvgo": { "name": "rrvgo", "version": "1.16.0", "sha256": "1339cxx5sizbdhhya1kxq9x31m2qvdl993abr4pn07hs3awya63p", - "depends": ["AnnotationDbi", "ggplot2", "ggrepel", "GO_db", "GOSemSim", "pheatmap", "shiny", "tm", "treemap", "umap", "wordcloud"] + "depends": ["AnnotationDbi", "GOSemSim", "GO_db", "ggplot2", "ggrepel", "pheatmap", "shiny", "tm", "treemap", "umap", "wordcloud"] }, "rsbml": { "name": "rsbml", @@ -11749,31 +11791,31 @@ "name": "rtracklayer", "version": "1.64.0", "sha256": "0h2cqr1jqqqxvkmqpngfl8ppm1p65vvlb1wgfwl9r4f99b8vz33g", - "depends": ["BiocGenerics", "BiocIO", "Biostrings", "curl", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "httr", "IRanges", "restfulr", "Rsamtools", "S4Vectors", "XML", "XVector", "zlibbioc"] + "depends": ["BiocGenerics", "BiocIO", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "XML", "XVector", "curl", "httr", "restfulr", "zlibbioc"] }, "runibic": { "name": "runibic", "version": "1.26.0", "sha256": "0q25b2dfgp82p156l37zzl5a842ah3hzq60f9gkcv4vqkns99z64", - "depends": ["biclust", "Rcpp", "SummarizedExperiment", "testthat"] + "depends": ["Rcpp", "SummarizedExperiment", "biclust", "testthat"] }, "sRACIPE": { "name": "sRACIPE", "version": "1.20.0", "sha256": "0kkfci9mifhb905c88cyfvwy6yacb1ar0ai6lcxhyx60bwnv6x7i", - "depends": ["BiocGenerics", "ggplot2", "gplots", "gridExtra", "htmlwidgets", "MASS", "RColorBrewer", "Rcpp", "reshape2", "S4Vectors", "SummarizedExperiment", "umap", "visNetwork"] + "depends": ["BiocGenerics", "MASS", "RColorBrewer", "Rcpp", "S4Vectors", "SummarizedExperiment", "ggplot2", "gplots", "gridExtra", "htmlwidgets", "reshape2", "umap", "visNetwork"] }, "sSNAPPY": { "name": "sSNAPPY", "version": "1.8.0", "sha256": "0ij3f7xax92jihzhf6axx7sq36jcnvyjfhgan1m1mcsaandb4d4k", - "depends": ["dplyr", "edgeR", "ggforce", "ggplot2", "ggraph", "graphite", "gtools", "igraph", "magrittr", "org_Hs_eg_db", "pheatmap", "reshape2", "rlang", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["SummarizedExperiment", "dplyr", "edgeR", "ggforce", "ggplot2", "ggraph", "graphite", "gtools", "igraph", "magrittr", "org_Hs_eg_db", "pheatmap", "reshape2", "rlang", "stringr", "tibble", "tidyr"] }, "sSeq": { "name": "sSeq", "version": "1.42.0", "sha256": "08wjz54qsgdwbf3rscb8mzqx2ffm62dm589zj4hflb1ayhgza2ai", - "depends": ["caTools", "RColorBrewer"] + "depends": ["RColorBrewer", "caTools"] }, "safe": { "name": "safe", @@ -11791,13 +11833,13 @@ "name": "sampleClassifier", "version": "1.28.0", "sha256": "12c8di5xw7q3a78z75labq3qzwsnk7s1xr5c75xsy8k2f04npn0z", - "depends": ["annotate", "e1071", "ggplot2", "MGFM", "MGFR"] + "depends": ["MGFM", "MGFR", "annotate", "e1071", "ggplot2"] }, "sangeranalyseR": { "name": "sangeranalyseR", "version": "1.14.0", "sha256": "1l5capnvhd78lzaiv44q9qiw9vdlnygmflmrqyv3ck3qk59hwsaw", - "depends": ["ape", "BiocStyle", "Biostrings", "data_table", "DECIPHER", "DT", "excelR", "ggdendro", "gridExtra", "knitr", "logger", "openxlsx", "plotly", "pwalign", "reshape2", "rmarkdown", "sangerseqR", "seqinr", "shiny", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "stringr", "zeallot"] + "depends": ["BiocStyle", "Biostrings", "DECIPHER", "DT", "ape", "data_table", "excelR", "ggdendro", "gridExtra", "knitr", "logger", "openxlsx", "plotly", "pwalign", "reshape2", "rmarkdown", "sangerseqR", "seqinr", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "stringr", "zeallot"] }, "sangerseqR": { "name": "sangerseqR", @@ -11809,73 +11851,79 @@ "name": "sarks", "version": "1.16.0", "sha256": "1ayfxfgk1zwmychdlhbq3can76swa127z5r587frs3c23zbm8qi2", - "depends": ["binom", "Biostrings", "cluster", "IRanges", "rJava"] + "depends": ["Biostrings", "IRanges", "binom", "cluster", "rJava"] }, "saseR": { "name": "saseR", "version": "1.0.0", "sha256": "1ibr75zm09h9cwzizljlv33s09y2jz2fasnblhmm59xdb8gwl7vg", - "depends": ["ASpli", "BiocGenerics", "BiocParallel", "data_table", "DESeq2", "DEXSeq", "dplyr", "edgeR", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "igraph", "IRanges", "knitr", "limma", "MASS", "MatrixGenerics", "pracma", "precrec", "PRROC", "rrcov", "S4Vectors", "SummarizedExperiment"] + "depends": ["ASpli", "BiocGenerics", "BiocParallel", "DESeq2", "DEXSeq", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "MASS", "MatrixGenerics", "PRROC", "S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "edgeR", "igraph", "knitr", "limma", "pracma", "precrec", "rrcov"] }, "satuRn": { "name": "satuRn", "version": "1.12.0", "sha256": "03mlb4j219w8760zm5hnryjwxns3qz9y3wl6zaqdfnl94bwyl9r8", - "depends": ["BiocParallel", "boot", "ggplot2", "limma", "locfdr", "Matrix", "pbapply", "SummarizedExperiment"] + "depends": ["BiocParallel", "Matrix", "SummarizedExperiment", "boot", "ggplot2", "limma", "locfdr", "pbapply"] }, "scAnnotatR": { "name": "scAnnotatR", "version": "1.10.0", "sha256": "1gzssp7im1d9pp2mbar27k854fcc3rqyza5d77flmhshq88xrskv", - "depends": ["AnnotationHub", "ape", "caret", "data_tree", "dplyr", "e1071", "ggplot2", "kernlab", "pROC", "ROCR", "Seurat", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["AnnotationHub", "ROCR", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "ape", "caret", "data_tree", "dplyr", "e1071", "ggplot2", "kernlab", "pROC"] }, "scBFA": { "name": "scBFA", "version": "1.18.0", "sha256": "0zq4xnvzlprhlv2n7d41ikms6cmwvm51sn3f61841ch6hdfai7my", - "depends": ["copula", "DESeq2", "ggplot2", "MASS", "Matrix", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "zinbwave"] + "depends": ["DESeq2", "MASS", "Matrix", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "copula", "ggplot2", "zinbwave"] }, "scBubbletree": { "name": "scBubbletree", "version": "1.6.0", "sha256": "0adzmw4bzs1a857bwwq63niwgn5wm3mdqxbqhily49h7yxnf3rv7", - "depends": ["ape", "future", "future_apply", "ggplot2", "ggtree", "patchwork", "proxy", "reshape2", "scales", "Seurat"] + "depends": ["Seurat", "ape", "future", "future_apply", "ggplot2", "ggtree", "patchwork", "proxy", "reshape2", "scales"] }, "scCB2": { "name": "scCB2", "version": "1.14.0", "sha256": "1iwcx1wra4f3lnqsmbs5m0agd6ffmpmdwn767n8q0qgvy8sdjaw0", - "depends": ["doParallel", "DropletUtils", "edgeR", "foreach", "iterators", "Matrix", "rhdf5", "Seurat", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DropletUtils", "Matrix", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "doParallel", "edgeR", "foreach", "iterators", "rhdf5"] + }, + "scClassify": { + "name": "scClassify", + "version": "1.16.0", + "sha256": "1ymrxm5xmhiaj5vzv2xy35pxn0jxjjjdzclx7f3qznbxyfkd35nm", + "depends": ["BiocParallel", "Cepo", "Matrix", "S4Vectors", "cluster", "diptest", "ggplot2", "ggraph", "hopach", "igraph", "limma", "mgcv", "minpack_lm", "mixtools", "proxy", "proxyC", "statmod"] }, "scDD": { "name": "scDD", "version": "1.28.0", "sha256": "106hawmyln6xj9m2npibb4lkd8qvz60lwjabhn3cpx3908x88ryb", - "depends": ["arm", "BiocParallel", "EBSeq", "fields", "ggplot2", "mclust", "outliers", "S4Vectors", "scran", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "EBSeq", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "arm", "fields", "ggplot2", "mclust", "outliers", "scran"] }, "scDDboost": { "name": "scDDboost", "version": "1.6.0", "sha256": "0q4vrrcnnhwb3r9jn13d1wsjn9mxai39pxaa9lf6zmg1v17aqmhg", - "depends": ["BH", "BiocParallel", "cluster", "EBSeq", "ggplot2", "mclust", "Oscope", "Rcpp", "RcppEigen", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BH", "BiocParallel", "EBSeq", "Oscope", "Rcpp", "RcppEigen", "SingleCellExperiment", "SummarizedExperiment", "cluster", "ggplot2", "mclust"] }, "scDataviz": { "name": "scDataviz", "version": "1.14.0", "sha256": "1njm8ym44ml51sbz001niclmkl4q78yid8ik76j9xnwldd9cb2c8", - "depends": ["corrplot", "flowCore", "ggplot2", "ggrepel", "MASS", "matrixStats", "RColorBrewer", "reshape2", "S4Vectors", "scales", "Seurat", "SingleCellExperiment", "umap"] + "depends": ["MASS", "RColorBrewer", "S4Vectors", "Seurat", "SingleCellExperiment", "corrplot", "flowCore", "ggplot2", "ggrepel", "matrixStats", "reshape2", "scales", "umap"] }, "scDblFinder": { "name": "scDblFinder", "version": "1.18.0", "sha256": "1np3arhjxxgif68i0wi0nqqbrwavy14dh9vy2g9mw4408k7789w0", - "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "bluster", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "igraph", "IRanges", "MASS", "Matrix", "Rsamtools", "rtracklayer", "S4Vectors", "scater", "scran", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "xgboost"] + "depends": ["BiocGenerics", "BiocNeighbors", "BiocParallel", "BiocSingular", "DelayedArray", "GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "Matrix", "Rsamtools", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "bluster", "igraph", "rtracklayer", "scater", "scran", "scuttle", "xgboost"] }, "scDesign3": { "name": "scDesign3", "version": "1.2.0", "sha256": "0jf8g5llkcashxsjsm39fivdqpyjx40gn362yzpwcfh81f4x95x1", - "depends": ["BiocParallel", "coop", "dplyr", "gamlss", "gamlss_dist", "ggplot2", "irlba", "Matrix", "matrixStats", "mclust", "mgcv", "mvtnorm", "pbmcapply", "rvinecopulib", "SingleCellExperiment", "sparseMVN", "SummarizedExperiment", "tibble", "umap", "viridis"] + "depends": ["BiocParallel", "Matrix", "SingleCellExperiment", "SummarizedExperiment", "coop", "dplyr", "gamlss", "gamlss_dist", "ggplot2", "irlba", "matrixStats", "mclust", "mgcv", "mvtnorm", "pbmcapply", "rvinecopulib", "sparseMVN", "tibble", "umap", "viridis"] }, "scFeatureFilter": { "name": "scFeatureFilter", @@ -11887,91 +11935,91 @@ "name": "scFeatures", "version": "1.4.0", "sha256": "178xpi6r1avbp4g9v5yd46jhnra6md47mljpn9y8a5991wh0rc4i", - "depends": ["ape", "AUCell", "BiocParallel", "cli", "DelayedArray", "DelayedMatrixStats", "dplyr", "DT", "EnsDb_Hsapiens_v79", "EnsDb_Mmusculus_v79", "ensembldb", "glue", "GSVA", "gtools", "MatrixGenerics", "msigdbr", "proxyC", "reshape2", "rmarkdown", "Seurat", "SingleCellSignalR", "spatstat_explore", "spatstat_geom", "tidyr"] + "depends": ["AUCell", "BiocParallel", "DT", "DelayedArray", "DelayedMatrixStats", "EnsDb_Hsapiens_v79", "EnsDb_Mmusculus_v79", "GSVA", "MatrixGenerics", "Seurat", "SingleCellSignalR", "ape", "cli", "dplyr", "ensembldb", "glue", "gtools", "msigdbr", "proxyC", "reshape2", "rmarkdown", "spatstat_explore", "spatstat_geom", "tidyr"] }, "scGPS": { "name": "scGPS", "version": "1.18.0", "sha256": "1l4rn2amrgih6fi3dshxdjgmvimv93qfan6asy77lgaf8vwa7rlh", - "depends": ["caret", "DESeq2", "dplyr", "dynamicTreeCut", "fastcluster", "ggplot2", "glmnet", "locfit", "Rcpp", "RcppArmadillo", "RcppParallel", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["DESeq2", "Rcpp", "RcppArmadillo", "RcppParallel", "SingleCellExperiment", "SummarizedExperiment", "caret", "dplyr", "dynamicTreeCut", "fastcluster", "ggplot2", "glmnet", "locfit"] }, "scHOT": { "name": "scHOT", "version": "1.16.0", "sha256": "07sk0yn5ji2avhmdwyzdl466pqncvij1zf0yicw5lpb62f1ac446", - "depends": ["BiocParallel", "ggforce", "ggplot2", "igraph", "IRanges", "Matrix", "reshape", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "IRanges", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ggforce", "ggplot2", "igraph", "reshape"] }, "scMET": { "name": "scMET", "version": "1.6.0", "sha256": "1v0x40720npv2c468mhydycrhff9bz2c8m35n3j4y7bja05qaazx", - "depends": ["assertthat", "BH", "BiocStyle", "coda", "cowplot", "data_table", "dplyr", "ggplot2", "logitnorm", "MASS", "Matrix", "matrixStats", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "S4Vectors", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment", "VGAM", "viridis"] + "depends": ["BH", "BiocStyle", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "S4Vectors", "SingleCellExperiment", "StanHeaders", "SummarizedExperiment", "VGAM", "assertthat", "coda", "cowplot", "data_table", "dplyr", "ggplot2", "logitnorm", "matrixStats", "rstan", "rstantools", "viridis"] }, "scMerge": { "name": "scMerge", "version": "1.20.0", "sha256": "0v344a2r7hw0x3b3192796sa922sc3jgi7z7pzbx6pcn4c5c9zw4", - 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"depends": ["BiocParallel", "Biostrings", "GenomicRanges", "snpStats", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BiocParallel", "Biostrings", "GenomicRanges", "SummarizedExperiment", "VariantAnnotation", "snpStats"] }, "scp": { "name": "scp", "version": "1.14.0", "sha256": "1b8hfvjpvni672qz6y53sy2wxbrn8anpanjd9qnixxisg94c66qj", - "depends": ["dplyr", "ggplot2", "ggrepel", "IHW", "matrixStats", "metapod", "MsCoreUtils", "MultiAssayExperiment", "nipals", "QFeatures", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["IHW", "MsCoreUtils", "MultiAssayExperiment", "QFeatures", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "ggrepel", "matrixStats", "metapod", "nipals"] }, "scran": { "name": "scran", "version": "1.32.0", "sha256": "0s1y2q4v596wxh8p5sr43mk9cnsc4kg36ld7vx71hbn3hwscqaa1", - "depends": ["beachmat", "BH", "BiocGenerics", "BiocParallel", "BiocSingular", "bluster", "DelayedArray", "DelayedMatrixStats", "dqrng", "edgeR", "igraph", "limma", "Matrix", "metapod", "Rcpp", "S4Vectors", "scuttle", "SingleCellExperiment", "statmod", "SummarizedExperiment"] + "depends": ["BH", "BiocGenerics", "BiocParallel", "BiocSingular", "DelayedArray", "DelayedMatrixStats", "Matrix", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "beachmat", "bluster", "dqrng", "edgeR", "igraph", "limma", "metapod", "scuttle", "statmod"] }, "screenCounter": { "name": "screenCounter", @@ -12097,49 +12145,49 @@ "name": "scruff", "version": "1.22.0", "sha256": "0gw8xj4agiz1j5lwp5zpa6m5k9wkkzrvcyzrrnqva1768v8123vb", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "Biostrings", "data_table", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "ggthemes", "parallelly", "plyr", "Rsamtools", "Rsubread", "rtracklayer", "S4Vectors", "scales", "ShortRead", "SingleCellExperiment", "stringdist", "SummarizedExperiment", "txdbmaker"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Rsamtools", "Rsubread", "S4Vectors", "ShortRead", "SingleCellExperiment", "SummarizedExperiment", "data_table", "ggbio", "ggplot2", "ggthemes", "parallelly", "plyr", "rtracklayer", "scales", "stringdist", "txdbmaker"] }, "scry": { "name": "scry", "version": "1.16.0", "sha256": "16489ff1nc798nfcmqvqaczm7hqffkhpad1dfgr7dxlahd8sbnw9", - "depends": ["BiocSingular", "DelayedArray", "glmpca", "Matrix", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocSingular", "DelayedArray", "Matrix", "SingleCellExperiment", "SummarizedExperiment", "glmpca"] }, "scuttle": { "name": "scuttle", "version": "1.14.0", "sha256": "1cja56k5y5vi1x0jdxaxvh13fc2lzh8g30gp294pz6p61prrf3ws", - "depends": ["beachmat", "BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GenomicRanges", "Matrix", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GenomicRanges", "Matrix", "Rcpp", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "beachmat"] }, "scviR": { "name": "scviR", "version": "1.4.0", "sha256": "0691v3kyhazmhzr2nqzc1inbc7i1kdjv4y94wl96fd20d48ypqhp", - "depends": ["basilisk", "BiocFileCache", "limma", "MatrixGenerics", "pheatmap", "reticulate", "S4Vectors", "scater", "shiny", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocFileCache", "MatrixGenerics", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "basilisk", "limma", "pheatmap", "reticulate", "scater", "shiny"] }, "sechm": { "name": "sechm", "version": "1.12.0", "sha256": "0ig46ikddqqd9sclbxrv1gffc6snz0h7pindfw06cdk2i4dsan30", - "depends": ["circlize", "ComplexHeatmap", "matrixStats", "randomcoloR", "S4Vectors", "seriation", "SummarizedExperiment"] + "depends": ["ComplexHeatmap", "S4Vectors", "SummarizedExperiment", "circlize", "matrixStats", "randomcoloR", "seriation"] }, "segmentSeq": { "name": "segmentSeq", "version": "2.38.0", "sha256": "114sv9k2zlgsg82z57wwnp74hmq8p22gy5dg8my91xb3rzv3h8xw", - "depends": ["abind", "baySeq", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "ShortRead", "abind", "baySeq"] }, "segmenter": { "name": "segmenter", "version": "1.10.0", "sha256": "0s4iphqgwdr0shg71gr273s20q9vrzhxq3nfqqv494z7raycf1qy", - "depends": ["bamsignals", "ChIPseeker", "chromhmmData", "ComplexHeatmap", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment"] + "depends": ["ChIPseeker", "ComplexHeatmap", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "bamsignals", "chromhmmData"] }, "selectKSigs": { "name": "selectKSigs", "version": "1.16.0", "sha256": "16cq4pg402a64vp0r1k9m91jqbdzij3la9gbzqqjc2vyr742yl14", - "depends": ["gtools", "HiLDA", "magrittr", "Rcpp"] + "depends": ["HiLDA", "Rcpp", "gtools", "magrittr"] }, "semisup": { "name": "semisup", @@ -12151,31 +12199,31 @@ "name": "seq.hotSPOT", "version": "1.4.0", "sha256": "0wyl4z54w1rk54c5sf3wvjg1sjpin0pj6j8j42g4a2zjkvvi5bva", - "depends": ["hash", "R_utils"] + "depends": ["R_utils", "hash"] }, "seq2pathway": { "name": "seq2pathway", "version": "1.36.0", "sha256": "0l1a53m4gjbgf6f53nndzdxldvi0j7xawd7m05wr23v64qd8a0ng", - "depends": ["biomaRt", "GenomicRanges", "GSA", "nnet", "seq2pathway_data", "WGCNA"] + "depends": ["GSA", "GenomicRanges", "WGCNA", "biomaRt", "nnet", "seq2pathway_data"] }, "seqArchR": { "name": "seqArchR", "version": "1.8.0", "sha256": "0q0ip73hvjq2j39mznd980fyvbwm9yb4ihk8yihv97i8h559ml9w", - "depends": ["BiocParallel", "Biostrings", "cli", "cluster", "cvTools", "fpc", "ggplot2", "ggseqlogo", "MASS", "Matrix", "matrixStats", "prettyunits", "reshape2", "reticulate"] + "depends": ["BiocParallel", "Biostrings", "MASS", "Matrix", "cli", "cluster", "cvTools", "fpc", "ggplot2", "ggseqlogo", "matrixStats", "prettyunits", "reshape2", "reticulate"] }, "seqArchRplus": { "name": "seqArchRplus", "version": "1.4.0", "sha256": "0wk87l3346v6fm77pywrwcfhwbvswkrxv79809c0wycn84qlqd0p", - "depends": ["BiocParallel", "Biostrings", "BSgenome", "ChIPseeker", "cli", "clusterProfiler", "cowplot", "factoextra", "GenomeInfoDb", "GenomicRanges", "ggimage", "ggplot2", "gridExtra", "heatmaps", "IRanges", "magick", "RColorBrewer", "S4Vectors", "scales", "seqArchR", "seqPattern"] + "depends": ["BSgenome", "BiocParallel", "Biostrings", "ChIPseeker", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "cli", "clusterProfiler", "cowplot", "factoextra", "ggimage", "ggplot2", "gridExtra", "heatmaps", "magick", "scales", "seqArchR", "seqPattern"] }, "seqCAT": { "name": "seqCAT", "version": "1.26.0", "sha256": "1b9y45src6yfz8fmiihp6p2s76gz1nva5swnf8fbar4mranfwi73", - "depends": ["dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "rlang", "rtracklayer", "S4Vectors", "scales", "SummarizedExperiment", "tidyr", "VariantAnnotation"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "dplyr", "ggplot2", "rlang", "rtracklayer", "scales", "tidyr"] }, "seqLogo": { "name": "seqLogo", @@ -12205,25 +12253,25 @@ "name": "seqsetvis", "version": "1.24.0", "sha256": "1aazar9k36hwlx9fq6iyd7f6g764nih9f0phl0sla7gizrmpwsms", - "depends": ["cowplot", "data_table", "eulerr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "ggplotify", "IRanges", "limma", "pbapply", "pbmcapply", "png", "RColorBrewer", "Rsamtools", "rtracklayer", "S4Vectors", "scales", "UpSetR"] + "depends": ["GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "UpSetR", "cowplot", "data_table", "eulerr", "ggplot2", "ggplotify", "limma", "pbapply", "pbmcapply", "png", "rtracklayer", "scales"] }, "sesame": { "name": "sesame", - "version": "1.22.1", - "sha256": "07c7g493fiv13hxmfki1s450rganmyiwvdjhz6aqrbi2b9w08w4n", - "depends": ["BiocFileCache", "BiocParallel", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "MASS", "preprocessCore", "readr", "reshape2", "S4Vectors", "sesameData", "stringr", "SummarizedExperiment", "tibble", "wheatmap"] + "version": "1.22.2", + "sha256": "1d2vjglpbhmr4fjp3zwipf0nwj5pms4l9q1xngyxrsbr26x7jp1d", + "depends": ["BiocFileCache", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "preprocessCore", "readr", "reshape2", "sesameData", "stringr", "tibble", "wheatmap"] }, "sevenC": { "name": "sevenC", "version": "1.24.0", "sha256": "0x1r6zbwl6shhzf2xc7lp06dvlhqhgh70i71fwn25lndwyhkw280", - "depends": ["BiocGenerics", "boot", "data_table", "GenomeInfoDb", "GenomicRanges", "InteractionSet", "IRanges", "purrr", "readr", "rtracklayer", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "InteractionSet", "S4Vectors", "boot", "data_table", "purrr", "readr", "rtracklayer"] }, "sevenbridges": { "name": "sevenbridges", "version": "1.34.0", "sha256": "0vy7vz87z371q2plhxkp5src6la6hj1w7bd4xkqbm3nmym2p32pb", - "depends": ["curl", "data_table", "docopt", "httr", "jsonlite", "objectProperties", "S4Vectors", "stringr", "uuid", "yaml"] + "depends": ["S4Vectors", "curl", "data_table", "docopt", "httr", "jsonlite", "objectProperties", "stringr", "uuid", "yaml"] }, "shiny_gosling": { "name": "shiny.gosling", @@ -12235,19 +12283,19 @@ "name": "shinyMethyl", "version": "1.40.0", "sha256": "15r9x1fqladjviyisbhr8zff0a6g9kvbvx72xcp3bfadp3wpygds", - "depends": ["Biobase", "BiocGenerics", "htmltools", "MatrixGenerics", "minfi", "RColorBrewer", "shiny"] + "depends": ["Biobase", "BiocGenerics", "MatrixGenerics", "RColorBrewer", "htmltools", "minfi", "shiny"] }, "shinyepico": { "name": "shinyepico", "version": "1.12.0", "sha256": "0k6h2n8dy66k1vl5mrag45z5knhgn9xbim5b0nbrzh9pwi687nc1", - "depends": ["data_table", "doParallel", "dplyr", "DT", "foreach", "GenomicRanges", "ggplot2", "gplots", "heatmaply", "limma", "minfi", "plotly", "reshape2", "rlang", "rmarkdown", "rtracklayer", "shiny", "shinycssloaders", "shinyjs", "shinythemes", "shinyWidgets", "statmod", "tidyr", "zip"] + "depends": ["DT", "GenomicRanges", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "gplots", "heatmaply", "limma", "minfi", "plotly", "reshape2", "rlang", "rmarkdown", "rtracklayer", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs", "shinythemes", "statmod", "tidyr", "zip"] }, "sigFeature": { "name": "sigFeature", "version": "1.22.0", "sha256": "0hgdzjlxxsxmrjrdlzabssdisn1rmi6h9nd37gid4dbr8xd1ibyh", - "depends": ["BiocParallel", "biocViews", "e1071", "Matrix", "nlme", "openxlsx", "pheatmap", "RColorBrewer", "SparseM", "SummarizedExperiment"] + "depends": ["BiocParallel", "Matrix", "RColorBrewer", "SparseM", "SummarizedExperiment", "biocViews", "e1071", "nlme", "openxlsx", "pheatmap"] }, "siggenes": { "name": "siggenes", @@ -12259,25 +12307,25 @@ "name": "sights", "version": "1.30.0", "sha256": "0kr52ng79wz6rh0rhk5kmjskn04xr89h14bdhryyzkhq80v0c2k8", - "depends": ["ggplot2", "lattice", "MASS", "qvalue", "reshape2"] + "depends": ["MASS", "ggplot2", "lattice", "qvalue", "reshape2"] }, "signatureSearch": { "name": "signatureSearch", "version": "1.18.0", "sha256": "1b32n67f5c804xxbpwxpykjhakixzf5zd1zbgwj976lvdb2adl34", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "clusterProfiler", "data_table", "DelayedArray", "DOSE", "dplyr", "ExperimentHub", "fastmatch", "fgsea", "ggplot2", "GSEABase", "HDF5Array", "magrittr", "Matrix", "org_Hs_eg_db", "qvalue", "Rcpp", "reactome_db", "readr", "reshape2", "rhdf5", "RSQLite", "scales", "SummarizedExperiment", "tibble", "visNetwork"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "DOSE", "DelayedArray", "ExperimentHub", "GSEABase", "HDF5Array", "Matrix", "RSQLite", "Rcpp", "SummarizedExperiment", "clusterProfiler", "data_table", "dplyr", "fastmatch", "fgsea", "ggplot2", "magrittr", "org_Hs_eg_db", "qvalue", "reactome_db", "readr", "reshape2", "rhdf5", "scales", "tibble", "visNetwork"] }, "signeR": { "name": "signeR", "version": "2.6.0", "sha256": "0jc9z48sgzjgxdidp9qhn4ccnx7jjlj0xnfrwajh0xq0ai1vnqb6", - "depends": ["ada", "BiocFileCache", "BiocGenerics", "Biostrings", "BSgenome", "bsplus", "class", "clue", "cowplot", "dplyr", "DT", "e1071", "future", "future_apply", "GenomeInfoDb", "GenomicRanges", "ggplot2", "ggpubr", "glmnet", "IRanges", "kknn", "listenv", "magrittr", "MASS", "maxstat", "nloptr", "NMF", "pheatmap", "PMCMRplus", "ppclust", "pROC", "proxy", "pvclust", "randomForest", "RColorBrewer", "Rcpp", "RcppArmadillo", "readr", "reshape2", "rtracklayer", "scales", "shiny", "shinycssloaders", "shinydashboard", "shinyWidgets", "survival", "survivalAnalysis", "survminer", "tibble", "tidyr", "VariantAnnotation", "VGAM"] + "depends": ["BSgenome", "BiocFileCache", "BiocGenerics", "Biostrings", "DT", "GenomeInfoDb", "GenomicRanges", "IRanges", "MASS", "NMF", "PMCMRplus", "RColorBrewer", "Rcpp", "RcppArmadillo", "VGAM", "VariantAnnotation", "ada", "bsplus", "class", "clue", "cowplot", "dplyr", "e1071", "future", "future_apply", "ggplot2", "ggpubr", "glmnet", "kknn", "listenv", "magrittr", "maxstat", "nloptr", "pROC", "pheatmap", "ppclust", "proxy", "pvclust", "randomForest", "readr", "reshape2", "rtracklayer", "scales", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "survival", "survivalAnalysis", "survminer", "tibble", "tidyr"] }, "signifinder": { "name": "signifinder", "version": "1.6.0", "sha256": "0r6acaqk7zaryy8ddpfischw08b6sml3cydrw8v9wys0rfv207pb", - "depends": ["AnnotationDbi", "BiocGenerics", "ComplexHeatmap", "consensusOV", "cowplot", "DGEobj_utils", "dplyr", "ensembldb", "ggplot2", "ggridges", "GSVA", "IRanges", "magrittr", "matrixStats", "maxstat", "openair", "org_Hs_eg_db", "patchwork", "RColorBrewer", "sparrow", "SpatialExperiment", "SummarizedExperiment", "survival", "survminer", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "viridis"] + "depends": ["AnnotationDbi", "BiocGenerics", "ComplexHeatmap", "DGEobj_utils", "GSVA", "IRanges", "RColorBrewer", "SpatialExperiment", "SummarizedExperiment", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "consensusOV", "cowplot", "dplyr", "ensembldb", "ggplot2", "ggridges", "magrittr", "matrixStats", "maxstat", "openair", "org_Hs_eg_db", "patchwork", "sparrow", "survival", "survminer", "viridis"] }, "sigsquared": { "name": "sigsquared", @@ -12289,7 +12337,7 @@ "name": "simPIC", "version": "1.0.0", "sha256": "0qspzkpdfpya2hkj1lry68cybcsscw9xj5ycpg87xg38n3jyqcbm", - "depends": ["actuar", "BiocGenerics", "checkmate", "fitdistrplus", "Matrix", "matrixStats", "rlang", "S4Vectors", "scales", "scuttle", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocGenerics", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "actuar", "checkmate", "fitdistrplus", "matrixStats", "rlang", "scales", "scuttle"] }, "similaRpeak": { "name": "similaRpeak", @@ -12301,55 +12349,55 @@ "name": "simona", "version": "1.2.0", "sha256": "04ynhnkb9qnniyvavfylg010pyry843362pjcw94kw9bwnklscy5", - "depends": ["circlize", "ComplexHeatmap", "GetoptLong", "GlobalOptions", "igraph", "matrixStats", "Polychrome", "Rcpp", "S4Vectors", "shiny", "xml2"] + "depends": ["ComplexHeatmap", "GetoptLong", "GlobalOptions", "Polychrome", "Rcpp", "S4Vectors", "circlize", "igraph", "matrixStats", "shiny", "xml2"] }, "simpleSeg": { "name": "simpleSeg", "version": "1.6.1", "sha256": "0rmd9kclh6x9gxqncw25563c4vh2xk206iia0qc058w9lbzqyp5f", - "depends": ["BiocParallel", "cytomapper", "EBImage", "S4Vectors", "spatstat_geom", "SummarizedExperiment", "terra"] + "depends": ["BiocParallel", "EBImage", "S4Vectors", "SummarizedExperiment", "cytomapper", "spatstat_geom", "terra"] }, "simplifyEnrichment": { "name": "simplifyEnrichment", "version": "1.14.0", "sha256": "1031rkl2gcgx4k1biz4bc38hfq7r6diqk48769jhii0r06ablrhi", - "depends": ["AnnotationDbi", "BiocGenerics", "circlize", "clue", "cluster", "colorspace", "ComplexHeatmap", "digest", "GetoptLong", "GlobalOptions", "GO_db", "GOSemSim", "Matrix", "org_Hs_eg_db", "proxyC", "slam", "tm"] + "depends": ["AnnotationDbi", "BiocGenerics", "ComplexHeatmap", "GOSemSim", "GO_db", "GetoptLong", "GlobalOptions", "Matrix", "circlize", "clue", "cluster", "colorspace", "digest", "org_Hs_eg_db", "proxyC", "slam", "tm"] }, "sincell": { "name": "sincell", "version": "1.36.0", "sha256": "1028mdjjxbnw5fzsdyjjgy7v6yhslhhm7053q3889yqamw0l82fg", - "depends": ["cluster", "entropy", "fastICA", "fields", "ggplot2", "igraph", "MASS", "proxy", "Rcpp", "reshape2", "Rtsne", "scatterplot3d", "statmod", "TSP"] + "depends": ["MASS", "Rcpp", "Rtsne", "TSP", "cluster", "entropy", "fastICA", "fields", "ggplot2", "igraph", "proxy", "reshape2", "scatterplot3d", "statmod"] }, "single": { "name": "single", "version": "1.7.0", "sha256": "0h7h9m4xr65nayr707jvjnbic1q4z0hsghw5i3pfpz2n6p9pb8s8", - "depends": ["BiocGenerics", "Biostrings", "dplyr", "GenomicAlignments", "IRanges", "reshape2", "rlang", "Rsamtools", "stringr", "tidyr"] + "depends": ["BiocGenerics", "Biostrings", "GenomicAlignments", "IRanges", "Rsamtools", "dplyr", "reshape2", "rlang", "stringr", "tidyr"] }, "singleCellTK": { "name": "singleCellTK", "version": "2.14.0", "sha256": "06qpdl1k5c94rsnbnb4vkml1sahvav3pkr71hfkqikyscbydnay4", - "depends": ["anndata", "AnnotationHub", "ape", "batchelor", "Biobase", "BiocParallel", "celda", "celldex", "circlize", "cluster", "colorspace", "colourpicker", "ComplexHeatmap", "cowplot", "data_table", "DelayedArray", "DelayedMatrixStats", "DESeq2", "dplyr", "DropletUtils", "DT", "eds", "enrichR", "ensembldb", "ExperimentHub", "fields", "ggplot2", "ggplotify", "ggrepel", "ggtree", "gridExtra", "GSEABase", "GSVA", "GSVAdata", "igraph", "KernSmooth", "limma", "magrittr", "MAST", "Matrix", "matrixStats", "metap", "msigdbr", "multtest", "plotly", "plyr", "R_utils", "reshape2", "reticulate", "rlang", "rmarkdown", "ROCR", "Rtsne", "S4Vectors", "scater", "scDblFinder", "scds", "scMerge", "scran", "scRNAseq", "scuttle", "Seurat", "shiny", "shinyalert", "shinycssloaders", "shinyjs", "SingleCellExperiment", "SingleR", "SoupX", "SummarizedExperiment", "sva", "TENxPBMCData", "tibble", "TrajectoryUtils", "TSCAN", "tximport", "VAM", "withr", "yaml", "zellkonverter", "zinbwave"] + "depends": ["AnnotationHub", "Biobase", "BiocParallel", "ComplexHeatmap", "DESeq2", "DT", "DelayedArray", "DelayedMatrixStats", "DropletUtils", "ExperimentHub", "GSEABase", "GSVA", "GSVAdata", "KernSmooth", "MAST", "Matrix", "ROCR", "R_utils", "Rtsne", "S4Vectors", "Seurat", "SingleCellExperiment", "SingleR", "SoupX", "SummarizedExperiment", "TENxPBMCData", "TSCAN", "TrajectoryUtils", "VAM", "anndata", "ape", "batchelor", "celda", "celldex", "circlize", "cluster", "colorspace", "colourpicker", "cowplot", "data_table", "dplyr", "eds", "enrichR", "ensembldb", "fields", "ggplot2", "ggplotify", "ggrepel", "ggtree", "gridExtra", "igraph", "limma", "magrittr", "matrixStats", "metap", "msigdbr", "multtest", "plotly", "plyr", "reshape2", "reticulate", "rlang", "rmarkdown", "scDblFinder", "scMerge", "scRNAseq", "scater", "scds", "scran", "scuttle", "shiny", "shinyalert", "shinycssloaders", "shinyjs", "sva", "tibble", "tximport", "withr", "yaml", "zellkonverter", "zinbwave"] }, "singscore": { "name": "singscore", "version": "1.24.0", "sha256": "12avzrc16mxz7v8jp4rxz5ia6008rjcja1h3hd0n60z644w9cng2", - "depends": ["Biobase", "BiocParallel", "edgeR", "ggplot2", "ggrepel", "GSEABase", "magrittr", "matrixStats", "plotly", "plyr", "RColorBrewer", "reshape", "reshape2", "S4Vectors", "SummarizedExperiment", "tidyr"] + "depends": ["Biobase", "BiocParallel", "GSEABase", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "edgeR", "ggplot2", "ggrepel", "magrittr", "matrixStats", "plotly", "plyr", "reshape", "reshape2", "tidyr"] }, "sitadela": { "name": "sitadela", "version": "1.12.0", "sha256": "1ynq19116z228cakznkpxd7msqxbvbgax2k6rk0wh9xksi6qzkpg", - "depends": ["Biobase", "BiocGenerics", "biomaRt", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "txdbmaker"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "Rsamtools", "S4Vectors", "biomaRt", "rtracklayer", "txdbmaker"] }, "sitePath": { "name": "sitePath", "version": "1.20.0", "sha256": "10g25has168cj7xjpn0q3da9rm7dxg6n2ysb8yc974gxqkabhzjh", - "depends": ["ape", "aplot", "ggplot2", "ggrepel", "ggtree", "gridExtra", "RColorBrewer", "Rcpp", "seqinr", "tidytree"] + "depends": ["RColorBrewer", "Rcpp", "ape", "aplot", "ggplot2", "ggrepel", "ggtree", "gridExtra", "seqinr", "tidytree"] }, "sizepower": { "name": "sizepower", @@ -12361,43 +12409,43 @@ "name": "sketchR", "version": "1.0.0", "sha256": "0jsv2rizfh72hrk9jrlhgl36cksa97858h7w57fkihq2hq155n67", - "depends": ["basilisk", "Biobase", "DelayedArray", "dplyr", "ggplot2", "reticulate", "rlang", "scales"] + "depends": ["Biobase", "DelayedArray", "basilisk", "dplyr", "ggplot2", "reticulate", "rlang", "scales"] }, "skewr": { "name": "skewr", "version": "1.36.0", "sha256": "1hh0519pqv6lq21plph7sy88918np12g7aw542sfblm81ma4p4qv", - "depends": ["IlluminaHumanMethylation450kmanifest", "methylumi", "minfi", "mixsmsn", "RColorBrewer", "S4Vectors", "wateRmelon"] + "depends": ["IlluminaHumanMethylation450kmanifest", "RColorBrewer", "S4Vectors", "methylumi", "minfi", "mixsmsn", "wateRmelon"] }, "slalom": { "name": "slalom", "version": "1.26.0", "sha256": "0km062qb7k7g18zz03nr6m7nigzpbxkasgirc4igslz4sfcldd9x", - "depends": ["BH", "ggplot2", "GSEABase", "Rcpp", "RcppArmadillo", "rsvd", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BH", "GSEABase", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "rsvd"] }, "slingshot": { "name": "slingshot", "version": "2.12.0", "sha256": "055dylajbn94khi0829qhxx0lbn1pvh30xw09gjn1jvxsgzj49nc", - "depends": ["igraph", "matrixStats", "princurve", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils", "igraph", "matrixStats", "princurve"] }, "smartid": { "name": "smartid", "version": "1.0.2", "sha256": "1bm8g8n3xifc2dg1d9vpw79vpwssa9q6ssvzyf77gp24zp2r734i", - "depends": ["dplyr", "ggplot2", "Matrix", "mclust", "mixtools", "sparseMatrixStats", "SummarizedExperiment", "tidyr"] + "depends": ["Matrix", "SummarizedExperiment", "dplyr", "ggplot2", "mclust", "mixtools", "sparseMatrixStats", "tidyr"] }, "smoothclust": { "name": "smoothclust", "version": "1.0.0", "sha256": "17mcfjxsgdvignrx576v97iwapmkfc4my8pvm6b2y1w7pibilx65", - "depends": ["sparseMatrixStats", "SpatialExperiment", "spdep", "SummarizedExperiment"] + "depends": ["SpatialExperiment", "SummarizedExperiment", "sparseMatrixStats", "spdep"] }, "snapcount": { "name": "snapcount", "version": "1.16.0", "sha256": "1hjd6xdwgz2qal6scpldwpdqlrbgap45bq2h599df6hgvrdym3l7", - "depends": ["assertthat", "data_table", "GenomicRanges", "httr", "IRanges", "jsonlite", "magrittr", "Matrix", "purrr", "R6", "rlang", "stringr", "SummarizedExperiment"] + "depends": ["GenomicRanges", "IRanges", "Matrix", "R6", "SummarizedExperiment", "assertthat", "data_table", "httr", "jsonlite", "magrittr", "purrr", "rlang", "stringr"] }, "snifter": { "name": "snifter", @@ -12421,67 +12469,67 @@ "name": "soGGi", "version": "1.36.0", "sha256": "0z995iyffzglc26pava4icxl315b077983lxvaldz5xkyhgvgpz7", - "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "chipseq", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "preprocessCore", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "chipseq", "ggplot2", "preprocessCore", "reshape2", "rtracklayer"] }, "spaSim": { "name": "spaSim", "version": "1.6.0", "sha256": "1lac621ss7qhfrabyn3nsmgiif4bcgwrgzs1xvbvf4lvwcy7ychm", - "depends": ["dplyr", "ggplot2", "RANN", "SpatialExperiment", "spatstat_geom", "spatstat_random", "SummarizedExperiment"] + "depends": ["RANN", "SpatialExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "spatstat_geom", "spatstat_random"] }, "sparrow": { "name": "sparrow", "version": "1.10.1", "sha256": "0vd18ws47zhx87bi35lmbh9wkp6s6d5nd9x77gd7fh24ni5z338s", - "depends": ["babelgene", "BiocGenerics", "BiocParallel", "BiocSet", "checkmate", "circlize", "ComplexHeatmap", "data_table", "DelayedMatrixStats", "edgeR", "ggplot2", "GSEABase", "irlba", "limma", "Matrix", "plotly", "viridis"] + "depends": ["BiocGenerics", "BiocParallel", "BiocSet", "ComplexHeatmap", "DelayedMatrixStats", "GSEABase", "Matrix", "babelgene", "checkmate", "circlize", "data_table", "edgeR", "ggplot2", "irlba", "limma", "plotly", "viridis"] }, "sparseMatrixStats": { "name": "sparseMatrixStats", "version": "1.16.0", "sha256": "04hk9r6sh83dyxm2j7jdcj0m4g74ln218j21rs71c2gg6mrkmlgf", - "depends": ["Matrix", "MatrixGenerics", "matrixStats", "Rcpp"] + "depends": ["Matrix", "MatrixGenerics", "Rcpp", "matrixStats"] }, "sparsenetgls": { "name": "sparsenetgls", "version": "1.22.0", "sha256": "1x8qzqsr2rzx6683lmzw5ia21853l7gj3m5jkx0r8azmjk4r6kqb", - "depends": ["glmnet", "huge", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "glmnet", "huge"] }, "spatialDE": { "name": "spatialDE", "version": "1.10.0", "sha256": "02npzs4vmjgc7bmv4rmmnz82slqcyrsq4y7wqapm30m7slhzm11g", - "depends": ["basilisk", "checkmate", "ggplot2", "ggrepel", "gridExtra", "Matrix", "reticulate", "scales", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["Matrix", "SpatialExperiment", "SummarizedExperiment", "basilisk", "checkmate", "ggplot2", "ggrepel", "gridExtra", "reticulate", "scales"] }, "spatialHeatmap": { "name": "spatialHeatmap", - "version": "2.10.0", - "sha256": "13f6q8gvwnq5saj6n90dgyhc8y3rl6m1vcc3z3zz08i469d948vq", - "depends": ["data_table", "dplyr", "edgeR", "genefilter", "ggplot2", "ggplotify", "gplots", "gridExtra", "grImport", "igraph", "Matrix", "reshape2", "rsvg", "S4Vectors", "scater", "scran", "scuttle", "shiny", "shinydashboard", "SingleCellExperiment", "spsComps", "SummarizedExperiment", "tibble", "xml2"] + "version": "2.10.2", + "sha256": "0arr3v3simkkq3wpf32jgm35s7mwbmpgn17g2y3glam37w8yc7gd", + "depends": ["Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "data_table", "dplyr", "edgeR", "genefilter", "ggplot2", "ggplotify", "gplots", "grImport", "gridExtra", "igraph", "reshape2", "rsvg", "scater", "scran", "scuttle", "shiny", "shinydashboard", "spsComps", "tibble", "xml2"] }, "spatzie": { "name": "spatzie", "version": "1.10.0", "sha256": "1jii3viq7ck1clkr59yafnh5a4pblskd77i1i3gxs7fpvl8ab7qb", - "depends": ["BiocGenerics", "BSgenome", "GenomeInfoDb", "GenomicFeatures", "GenomicInteractions", "GenomicRanges", "ggplot2", "IRanges", "MatrixGenerics", "matrixStats", "motifmatchr", "S4Vectors", "SummarizedExperiment", "TFBSTools"] + "depends": ["BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "GenomicInteractions", "GenomicRanges", "IRanges", "MatrixGenerics", "S4Vectors", "SummarizedExperiment", "TFBSTools", "ggplot2", "matrixStats", "motifmatchr"] }, "specL": { "name": "specL", "version": "1.38.0", "sha256": "0klg19h1ijwd9f7pary77zn52mp8ryzvhv6g3h5xg8yjv1kl9m7r", - "depends": ["DBI", "protViz", "RSQLite", "seqinr"] + "depends": ["DBI", "RSQLite", "protViz", "seqinr"] }, "speckle": { "name": "speckle", "version": "1.4.0", "sha256": "1m7fl9l20f65w5il3jhj930i71kb1bvsz0iqb7yi1nczjx1b6hcw", - "depends": ["edgeR", "ggplot2", "limma", "Seurat", "SingleCellExperiment"] + "depends": ["Seurat", "SingleCellExperiment", "edgeR", "ggplot2", "limma"] }, "spicyR": { "name": "spicyR", - "version": "1.16.1", - "sha256": "03bmjr4vbma5ynj773b364vb05vf06fyzvbq75qi7mczjyh4kckw", - "depends": ["BiocParallel", "ClassifyR", "cli", "concaveman", "data_table", "dplyr", "ggforce", "ggplot2", "lmerTest", "magrittr", "pheatmap", "rlang", "S4Vectors", "scam", "SingleCellExperiment", "SpatialExperiment", "spatstat_explore", "spatstat_geom", "SummarizedExperiment", "tibble", "tidyr"] + "version": "1.16.3", + "sha256": "0xy964xx99wklh44m41h3066hndxv04i1jh623612sidhj4viih3", + "depends": ["BiocParallel", "ClassifyR", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "cli", "concaveman", "data_table", "dplyr", "ggforce", "ggplot2", "lmerTest", "magrittr", "pheatmap", "rlang", "scam", "spatstat_explore", "spatstat_geom", "tibble", "tidyr"] }, "spikeLI": { "name": "spikeLI", @@ -12493,31 +12541,31 @@ "name": "spiky", "version": "1.10.0", "sha256": "1cwvdqa4zy17nk6d04kg6rrsd6rk4f5nrg58pf882jn44rjfl49i", - "depends": ["bamlss", "Biostrings", "BlandAltmanLeh", "BSgenome", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "IRanges", "Rsamtools", "S4Vectors", "scales"] + "depends": ["BSgenome", "Biostrings", "BlandAltmanLeh", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "bamlss", "ggplot2", "scales"] }, "spillR": { "name": "spillR", - "version": "1.0.0", - "sha256": "1pqb9n0rvjx8wdw4vjfmi9m2d5lf6xddygpf1grab3yhkrn9akw8", - "depends": ["CATALYST", "dplyr", "ggplot2", "S4Vectors", "spatstat_geom", "SummarizedExperiment", "tibble", "tidyr", "tidyselect"] + "version": "1.0.1", + "sha256": "18194i0zz2cz2wc69gpifk2s6h58acp57adlkp5ciwv68h2af5dd", + "depends": ["CATALYST", "S4Vectors", "SummarizedExperiment", "dplyr", "ggplot2", "spatstat_univar", "tibble", "tidyr", "tidyselect"] }, "spkTools": { "name": "spkTools", "version": "1.60.0", "sha256": "1q6vhhdfh5xwpkwfcbjlbv9s8rd5mzn98xqcns7ix5d3rcqk5ixk", - "depends": ["Biobase", "gtools", "RColorBrewer"] + "depends": ["Biobase", "RColorBrewer", "gtools"] }, "splatter": { "name": "splatter", "version": "1.28.0", "sha256": "1drifr04nd8x40z6v0ig60l2zcm289kmxlmdy8siczn90xzy8cm7", - "depends": ["BiocGenerics", "BiocParallel", "checkmate", "crayon", "edgeR", "fitdistrplus", "locfit", "matrixStats", "rlang", "S4Vectors", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "withr"] + "depends": ["BiocGenerics", "BiocParallel", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "checkmate", "crayon", "edgeR", "fitdistrplus", "locfit", "matrixStats", "rlang", "scuttle", "withr"] }, "splineTimeR": { "name": "splineTimeR", "version": "1.32.0", "sha256": "0y4sydqmwpj5jwalhbf1zs6mqk447c7f22a5qy9pj8sqblh042rn", - "depends": ["Biobase", "FIs", "GeneNet", "GSEABase", "gtools", "igraph", "limma", "longitudinal"] + "depends": ["Biobase", "FIs", "GSEABase", "GeneNet", "gtools", "igraph", "limma", "longitudinal"] }, "splots": { "name": "splots", @@ -12529,25 +12577,25 @@ "name": "spoon", "version": "1.0.0", "sha256": "1ygrb534nlsxckbc61y5s3rjc4cpmf265y5a48charjv9y3ahw19", - "depends": ["BiocParallel", "BRISC", "Matrix", "nnSVG", "scuttle", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["BRISC", "BiocParallel", "Matrix", "SpatialExperiment", "SummarizedExperiment", "nnSVG", "scuttle"] }, "spqn": { "name": "spqn", "version": "1.16.0", "sha256": "0477rs2wq9319zj1pm7j96inhd38sqs85wvj06r47g2k77blcz87", - "depends": ["BiocGenerics", "ggplot2", "ggridges", "matrixStats", "SummarizedExperiment"] + "depends": ["BiocGenerics", "SummarizedExperiment", "ggplot2", "ggridges", "matrixStats"] }, "srnadiff": { "name": "srnadiff", "version": "1.24.0", "sha256": "0gr754qb5gc0lh1r513yrfrys7q13a0kmbzmbx5m0p7wwp508mdg", - "depends": ["BiocManager", "BiocParallel", "BiocStyle", "DESeq2", "devtools", "edgeR", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "Rcpp", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocManager", "BiocParallel", "BiocStyle", "DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "Rcpp", "Rsamtools", "S4Vectors", "SummarizedExperiment", "devtools", "edgeR", "rtracklayer"] }, "ssPATHS": { "name": "ssPATHS", "version": "1.18.0", "sha256": "0h2hs6snnh9kzqna94ndp3gk4bkldsxrg67fy6gx7d15agjl9y2s", - "depends": ["dml", "MESS", "ROCR", "SummarizedExperiment"] + "depends": ["MESS", "ROCR", "SummarizedExperiment", "dml"] }, "sscu": { "name": "sscu", @@ -12571,13 +12619,13 @@ "name": "ssviz", "version": "1.38.0", "sha256": "0m5jh45v58f92m4ib7b1fy7gpixpvgm65gx2sw1qmx1qihp4hkrb", - "depends": ["Biostrings", "ggplot2", "RColorBrewer", "reshape", "Rsamtools"] + "depends": ["Biostrings", "RColorBrewer", "Rsamtools", "ggplot2", "reshape"] }, "stJoincount": { "name": "stJoincount", "version": "1.6.0", "sha256": "1i8bkygxxl3cq8zjpfslakib1knivyc4wfil1sa4s0jcj4iyhlhx", - "depends": ["dplyr", "ggplot2", "magrittr", "pheatmap", "raster", "Seurat", "sp", "SpatialExperiment", "spdep", "SummarizedExperiment"] + "depends": ["Seurat", "SpatialExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "magrittr", "pheatmap", "raster", "sp", "spdep"] }, "staRank": { "name": "staRank", @@ -12595,31 +12643,31 @@ "name": "standR", "version": "1.8.0", "sha256": "0lnggcppcgd5k07yx5ig7gjyj7bkwk7mvs9l785mlr1wgmqz4vm0", - "depends": ["Biobase", "BiocGenerics", "dplyr", "edgeR", "ggalluvial", "ggplot2", "limma", "mclustcomp", "patchwork", "readr", "rlang", "ruv", "RUVSeq", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["Biobase", "BiocGenerics", "RUVSeq", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "dplyr", "edgeR", "ggalluvial", "ggplot2", "limma", "mclustcomp", "patchwork", "readr", "rlang", "ruv", "tibble", "tidyr"] }, "statTarget": { "name": "statTarget", "version": "1.34.0", "sha256": "0p89j6isdyy7zlniqd42s7y50sjyd7a9fpg3hwi92ssvv77zdd4c", - "depends": ["impute", "pdist", "pls", "plyr", "randomForest", "ROC", "rrcov"] + "depends": ["ROC", "impute", "pdist", "pls", "plyr", "randomForest", "rrcov"] }, "stepNorm": { "name": "stepNorm", "version": "1.76.0", "sha256": "18v5hqcwnbzw8kwq9ahia36ikr3fd1cgwvx0rj32qbs66kr9phhz", - "depends": ["marray", "MASS"] + "depends": ["MASS", "marray"] }, "strandCheckR": { "name": "strandCheckR", "version": "1.22.0", "sha256": "05r9d87y158pbnakqcli94nbwfvl72bsl1wbmbjyhk3cp9r1si2d", - "depends": ["BiocGenerics", "dplyr", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "magrittr", "reshape2", "rmarkdown", "Rsamtools", "S4Vectors", "stringr", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "TxDb_Hsapiens_UCSC_hg38_knownGene", "dplyr", "ggplot2", "gridExtra", "magrittr", "reshape2", "rmarkdown", "stringr"] }, "struct": { "name": "struct", "version": "1.16.0", "sha256": "086fjmhmywi8ciycnz29fgkjwmxws2d130fvgwmx504gf7l841lk", - "depends": ["knitr", "ontologyIndex", "rols", "S4Vectors", "SummarizedExperiment"] + "depends": ["S4Vectors", "SummarizedExperiment", "knitr", "ontologyIndex", "rols"] }, "structToolbox": { "name": "structToolbox", @@ -12637,31 +12685,31 @@ "name": "supersigs", "version": "1.12.0", "sha256": "00rnd7h7xrbpr5jqz7l03pk6rlyqfcmkyrxpjwayz9gj2yc87lk3", - "depends": ["assertthat", "Biostrings", "caret", "dplyr", "rlang", "rsample", "SummarizedExperiment", "tidyr"] + "depends": ["Biostrings", "SummarizedExperiment", "assertthat", "caret", "dplyr", "rlang", "rsample", "tidyr"] }, "supraHex": { "name": "supraHex", "version": "1.42.0", "sha256": "10qfvwbz5cbxvxbdmbc29jfp6apza4z70p4b9nfwgs4y95c11p7l", - "depends": ["ape", "dplyr", "hexbin", "igraph", "magrittr", "MASS", "purrr", "readr", "stringr", "tibble", "tidyr"] + "depends": ["MASS", "ape", "dplyr", "hexbin", "igraph", "magrittr", "purrr", "readr", "stringr", "tibble", "tidyr"] }, "surfaltr": { "name": "surfaltr", "version": "1.10.0", "sha256": "1i7ssmnnv81x5nb63sbk07mkirb99bsn9kyy59n8ib03akygv2mz", - "depends": ["biomaRt", "Biostrings", "dplyr", "ggplot2", "httr", "msa", "protr", "readr", "seqinr", "stringr", "testthat", "xml2"] + "depends": ["Biostrings", "biomaRt", "dplyr", "ggplot2", "httr", "msa", "protr", "readr", "seqinr", "stringr", "testthat", "xml2"] }, "survcomp": { "name": "survcomp", "version": "1.54.0", "sha256": "090dl580cwicn3px1khkhcix25snig0k7phb7z3nzmrbxmp82ygc", - "depends": ["bootstrap", "ipred", "KernSmooth", "prodlim", "rmeta", "SuppDists", "survival", "survivalROC"] + "depends": ["KernSmooth", "SuppDists", "bootstrap", "ipred", "prodlim", "rmeta", "survival", "survivalROC"] }, "survtype": { "name": "survtype", "version": "1.20.0", "sha256": "0pyyzkxqaa8xbrap1d2ppd4g4i4zxr8frjw0mlq8hw9gf1n94k0l", - "depends": ["clustvarsel", "pheatmap", "SummarizedExperiment", "survival", "survminer"] + "depends": ["SummarizedExperiment", "clustvarsel", "pheatmap", "survival", "survminer"] }, "sva": { "name": "sva", @@ -12673,13 +12721,13 @@ "name": "svaNUMT", "version": "1.10.0", "sha256": "15159bxq26w80nc160rk5k48435h6snxmsmynfjiaq3kzv5143pd", - "depends": ["assertthat", "BiocGenerics", "Biostrings", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "pwalign", "rlang", "rtracklayer", "S4Vectors", "stringr", "StructuralVariantAnnotation", "VariantAnnotation"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "S4Vectors", "StructuralVariantAnnotation", "VariantAnnotation", "assertthat", "dplyr", "pwalign", "rlang", "rtracklayer", "stringr"] }, "svaRetro": { "name": "svaRetro", "version": "1.10.0", "sha256": "03scsdy5pypir0jqgj38y5hnj82sh21gip5xd8dbqjk9ryb75ays", - "depends": ["assertthat", "BiocGenerics", "Biostrings", "dplyr", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "rlang", "rtracklayer", "S4Vectors", "stringr", "StructuralVariantAnnotation", "VariantAnnotation"] + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "S4Vectors", "StructuralVariantAnnotation", "VariantAnnotation", "assertthat", "dplyr", "rlang", "rtracklayer", "stringr"] }, "swfdr": { "name": "swfdr", @@ -12697,7 +12745,7 @@ "name": "switchde", "version": "1.30.0", "sha256": "033xpkivywvk4rg1gqr0drrhwgp58nlgr3in65c0fxlwd1jd6kpj", - "depends": ["dplyr", "ggplot2", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2"] }, "synapsis": { "name": "synapsis", @@ -12709,79 +12757,79 @@ "name": "synapter", "version": "2.28.0", "sha256": "1imhap1ny0x687qh9s1q9m978hwhhkci0j8i3qfwrvn3ykijlsa7", - "depends": ["Biobase", "Biostrings", "cleaver", "lattice", "MSnbase", "multtest", "qvalue", "RColorBrewer", "readr", "rmarkdown"] + "depends": ["Biobase", "Biostrings", "MSnbase", "RColorBrewer", "cleaver", "lattice", "multtest", "qvalue", "readr", "rmarkdown"] }, "synergyfinder": { "name": "synergyfinder", "version": "3.12.0", "sha256": "02d9615k8fl9bb7hd6f5vz11k9aard8zs880siac2s23pwzivjwn", - "depends": ["dplyr", "drc", "furrr", "future", "ggforce", "ggplot2", "ggrepel", "gstat", "kriging", "lattice", "magrittr", "metR", "mice", "nleqslv", "pbapply", "plotly", "purrr", "reshape2", "sp", "SpatialExtremes", "stringr", "tidyr", "tidyverse", "vegan"] + "depends": ["SpatialExtremes", "dplyr", "drc", "furrr", "future", "ggforce", "ggplot2", "ggrepel", "gstat", "kriging", "lattice", "magrittr", "metR", "mice", "nleqslv", "pbapply", "plotly", "purrr", "reshape2", "sp", "stringr", "tidyr", "tidyverse", "vegan"] }, "synlet": { "name": "synlet", "version": "2.4.0", "sha256": "0nfqm2qfavn71k5dhz6x2958yplasnbvjc6mqzh4i237x03184g4", - "depends": ["data_table", "ggplot2", "magrittr", "patchwork", "RankProd", "RColorBrewer"] + "depends": ["RColorBrewer", "RankProd", "data_table", "ggplot2", "magrittr", "patchwork"] }, "syntenet": { "name": "syntenet", "version": "1.6.0", "sha256": "1220hbkmg10ly0i5m6wnqnsa6m2f2xgs85798y9mlcqwxrp5ih35", - "depends": ["BiocParallel", "Biostrings", "GenomicRanges", "ggnetwork", "ggplot2", "igraph", "intergraph", "networkD3", "pheatmap", "RColorBrewer", "Rcpp", "rlang", "rtracklayer", "testthat"] + "depends": ["BiocParallel", "Biostrings", "GenomicRanges", "RColorBrewer", "Rcpp", "ggnetwork", "ggplot2", "igraph", "intergraph", "networkD3", "pheatmap", "rlang", "rtracklayer", "testthat"] }, "systemPipeR": { "name": "systemPipeR", "version": "2.10.0", "sha256": "13xxcqy5hhy45zglv6gc86ndmisfkjq4dg55x2j1kw3jqha1brnx", - "depends": ["BiocGenerics", "Biostrings", "crayon", "GenomicRanges", "ggplot2", "htmlwidgets", "magrittr", "Rsamtools", "S4Vectors", "ShortRead", "stringr", "SummarizedExperiment", "yaml"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "crayon", "ggplot2", "htmlwidgets", "magrittr", "stringr", "yaml"] }, "systemPipeShiny": { "name": "systemPipeShiny", "version": "1.14.0", "sha256": "14wgamxg2jpj3xjlna9x5rd3kpndhxs20gh84acix3pa3ppr8xgf", - "depends": ["assertthat", "bsplus", "crayon", "dplyr", "drawer", "DT", "ggplot2", "glue", "htmltools", "magrittr", "openssl", "plotly", "R6", "rlang", "RSQLite", "rstudioapi", "shiny", "shinyAce", "shinydashboard", "shinydashboardPlus", "shinyFiles", "shinyjqui", "shinyjs", "shinytoastr", "shinyWidgets", "spsComps", "spsUtil", "stringr", "styler", "tibble", "vroom", "yaml"] + "depends": ["DT", "R6", "RSQLite", "assertthat", "bsplus", "crayon", "dplyr", "drawer", "ggplot2", "glue", "htmltools", "magrittr", "openssl", "plotly", "rlang", "rstudioapi", "shiny", "shinyAce", "shinyFiles", "shinyWidgets", "shinydashboard", "shinydashboardPlus", "shinyjqui", "shinyjs", "shinytoastr", "spsComps", "spsUtil", "stringr", "styler", "tibble", "vroom", "yaml"] }, "systemPipeTools": { "name": "systemPipeTools", "version": "1.12.0", "sha256": "08r0dglqpr638pbssr3l3xcly7mhj0jsq5rrzdnqh5sg4wz11gyj", - "depends": ["ape", "DESeq2", "dplyr", "DT", "GGally", "ggplot2", "ggrepel", "ggtree", "glmpca", "magrittr", "pheatmap", "plotly", "Rtsne", "SummarizedExperiment", "tibble"] + "depends": ["DESeq2", "DT", "GGally", "Rtsne", "SummarizedExperiment", "ape", "dplyr", "ggplot2", "ggrepel", "ggtree", "glmpca", "magrittr", "pheatmap", "plotly", "tibble"] }, "tLOH": { "name": "tLOH", "version": "1.12.0", "sha256": "0r8a0srff8y5ap2zz4kk6302gkb69bgylxggnz704zi3yzvyklv1", - "depends": ["bestNormalize", "data_table", "depmixS4", "dplyr", "GenomicRanges", "ggplot2", "MatrixGenerics", "naniar", "purrr", "scales", "stringr", "VariantAnnotation"] + "depends": ["GenomicRanges", "MatrixGenerics", "VariantAnnotation", "bestNormalize", "data_table", "depmixS4", "dplyr", "ggplot2", "naniar", "purrr", "scales", "stringr"] }, "tRNA": { "name": "tRNA", "version": "1.22.0", "sha256": "0dg4s5kxsdh2j8smqi8vm7yncy9kb79sj8xlvf4wgf3aljarms21", - "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "ggplot2", "IRanges", "Modstrings", "S4Vectors", "scales", "stringr", "Structstrings", "XVector"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "IRanges", "Modstrings", "S4Vectors", "Structstrings", "XVector", "ggplot2", "scales", "stringr"] }, "tRNAdbImport": { "name": "tRNAdbImport", "version": "1.22.0", "sha256": "0yvgxxf5d5mh91cmbba66krj6jz5gl1qkgjck9310k4mk7pjfww3", - "depends": ["Biostrings", "GenomicRanges", "httr2", "IRanges", "Modstrings", "S4Vectors", "stringr", "Structstrings", "tRNA", "xml2"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "Modstrings", "S4Vectors", "Structstrings", "httr2", "stringr", "tRNA", "xml2"] }, "tRNAscanImport": { "name": "tRNAscanImport", "version": "1.24.0", "sha256": "12wn5sdq1miimn31ismzs2w06q3l66l774dbfndw8bx3awhrf7g1", - "depends": ["BiocGenerics", "Biostrings", "BSgenome", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "stringr", "Structstrings", "tRNA", "XVector"] + "depends": ["BSgenome", "BiocGenerics", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "Structstrings", "XVector", "rtracklayer", "stringr", "tRNA"] }, "tRanslatome": { "name": "tRanslatome", "version": "1.42.0", "sha256": "0xnr7a7cm7lcvyipjj6p4347yqykpfghz37qxyam5ixplfwlh1cg", - "depends": ["anota", "Biobase", "DESeq2", "edgeR", "GOSemSim", "gplots", "Heatplus", "limma", "org_Hs_eg_db", "plotrix", "RankProd", "topGO"] + "depends": ["Biobase", "DESeq2", "GOSemSim", "Heatplus", "RankProd", "anota", "edgeR", "gplots", "limma", "org_Hs_eg_db", "plotrix", "topGO"] }, "tadar": { "name": "tadar", - "version": "1.2.0", - "sha256": "12jmrnaqf1hkdjw2qvxjkb2y2860ck9a5957h44nkhxf75lv35vb", - "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "ggplot2", "Gviz", "IRanges", "MatrixGenerics", "rlang", "Rsamtools", "S4Vectors", "VariantAnnotation"] + "version": "1.2.1", + "sha256": "19f9qzz2hg4j75v6xzma9va0wr3iq8la3dv0qj0aky81ncam4b8z", + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "Gviz", "IRanges", "MatrixGenerics", "Rsamtools", "S4Vectors", "VariantAnnotation", "ggplot2", "rlang"] }, "tanggle": { "name": "tanggle", @@ -12795,6 +12843,12 @@ "sha256": "1crqxj8wk66h2jvxnmw5rhdsdfhkd59d2pxw1lf05w7dkd495zfr", "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "matrixStats", "shiny"] }, + "tenXplore": { + "name": "tenXplore", + "version": "1.26.2", + "sha256": "088vs1pcq92qgismxz886nmciharsvdnj0h2pbs40n391icbp7if", + "depends": ["AnnotationDbi", "BiocFileCache", "SummarizedExperiment", "matrixStats", "ontoProc", "org_Mm_eg_db", "shiny"] + }, "ternarynet": { "name": "ternarynet", "version": "1.48.0", @@ -12805,55 +12859,55 @@ "name": "terraTCGAdata", "version": "1.8.0", "sha256": "18i933ndja1pa4iql96fvx2brjmcvvirlp048hjxvkapm0bhsm19", - "depends": ["AnVIL", "BiocFileCache", "dplyr", "GenomicRanges", "MultiAssayExperiment", "RaggedExperiment", "readr", "S4Vectors", "TCGAutils", "tidyr"] + "depends": ["AnVIL", "BiocFileCache", "GenomicRanges", "MultiAssayExperiment", "RaggedExperiment", "S4Vectors", "TCGAutils", "dplyr", "readr", "tidyr"] }, "tidyCoverage": { "name": "tidyCoverage", "version": "1.0.0", "sha256": "150q5qwifni2d2jvx1k3c0cq5n2k1s33yps8v5d6ksa3qs510p4s", - "depends": ["BiocIO", "BiocParallel", "cli", "dplyr", "fansi", "GenomeInfoDb", "GenomicRanges", "IRanges", "pillar", "purrr", "rlang", "rtracklayer", "S4Vectors", "SummarizedExperiment", "tidyr", "vctrs"] + "depends": ["BiocIO", "BiocParallel", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "cli", "dplyr", "fansi", "pillar", "purrr", "rlang", "rtracklayer", "tidyr", "vctrs"] }, "tidySingleCellExperiment": { "name": "tidySingleCellExperiment", "version": "1.14.0", "sha256": "1rvc0576ajxx7njyiyh2ql85an4dn9v8v4q7g8gfdgd9jg5v4hmz", - "depends": ["cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "Matrix", "pillar", "pkgconfig", "purrr", "rlang", "S4Vectors", "SingleCellExperiment", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] + "depends": ["Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "pillar", "pkgconfig", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] }, "tidySpatialExperiment": { "name": "tidySpatialExperiment", "version": "1.0.0", "sha256": "0a2bramm53dvl7qib18z7s8zrfjprkrg6zzj5q7z4jf5smj7szzf", - "depends": ["BiocGenerics", "cli", "dplyr", "fansi", "ggplot2", "lifecycle", "magrittr", "Matrix", "pillar", "pkgconfig", "purrr", "rlang", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "tidySingleCellExperiment", "ttservice", "vctrs"] + "depends": ["BiocGenerics", "Matrix", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "cli", "dplyr", "fansi", "ggplot2", "lifecycle", "magrittr", "pillar", "pkgconfig", "purrr", "rlang", "stringr", "tibble", "tidySingleCellExperiment", "tidyr", "tidyselect", "ttservice", "vctrs"] }, "tidySummarizedExperiment": { "name": "tidySummarizedExperiment", "version": "1.14.0", "sha256": "0bcvna28shr27pdzi1n2g6bldqrakkwn0wh7ld39wbn439awshr9", - "depends": ["cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "pillar", "pkgconfig", "purrr", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] + "depends": ["S4Vectors", "SummarizedExperiment", "cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "pillar", "pkgconfig", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] }, "tidybulk": { "name": "tidybulk", "version": "1.16.0", "sha256": "1ij4x2fqcpdkdl62kwjhk3w19m7vwq8m3bglhsxz7pkzy49cfifx", - "depends": ["crayon", "dplyr", "GenomicRanges", "lifecycle", "magrittr", "Matrix", "preprocessCore", "purrr", "readr", "rlang", "S4Vectors", "scales", "stringi", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "ttservice"] + "depends": ["GenomicRanges", "Matrix", "S4Vectors", "SummarizedExperiment", "crayon", "dplyr", "lifecycle", "magrittr", "preprocessCore", "purrr", "readr", "rlang", "scales", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "ttservice"] }, "tidyomics": { "name": "tidyomics", "version": "1.0.0", "sha256": "08d2bkaqya090y93wg8cj36bbqbiy62p9swiz9ci9z4055sv900y", - "depends": ["cli", "nullranges", "plyranges", "purrr", "rlang", "stringr", "tidybulk", "tidyseurat", "tidySingleCellExperiment", "tidySummarizedExperiment"] + "depends": ["cli", "nullranges", "plyranges", "purrr", "rlang", "stringr", "tidySingleCellExperiment", "tidySummarizedExperiment", "tidybulk", "tidyseurat"] }, "tigre": { "name": "tigre", "version": "1.58.0", "sha256": "1gdfiga7m4zdsr8vj8anlkj1jfdrlzhsik36jdgi4f92pyyllgwx", - "depends": ["annotate", "AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "gplots", "RSQLite"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "RSQLite", "annotate", "gplots"] }, "tilingArray": { "name": "tilingArray", "version": "1.82.0", "sha256": "1408275gvfilc2k8sfsja8bm5fdgnblf2sf5wdd3if51qi61clb0", - "depends": ["affy", "Biobase", "genefilter", "pixmap", "RColorBrewer", "strucchange", "vsn"] + "depends": ["Biobase", "RColorBrewer", "affy", "genefilter", "pixmap", "strucchange", "vsn"] }, "timeOmics": { "name": "timeOmics", @@ -12865,7 +12919,7 @@ "name": "timecourse", "version": "1.76.0", "sha256": "05q6vw76hhi4frpf4vivq1jxkh99xq44vw2p5gz4zgcinsc58yql", - "depends": ["Biobase", "limma", "marray", "MASS"] + "depends": ["Biobase", "MASS", "limma", "marray"] }, "timescape": { "name": "timescape", @@ -12883,19 +12937,19 @@ "name": "tomoda", "version": "1.14.0", "sha256": "0cx4153sknl0prpdm12y6n44kg10ib8b7qk3102pvgv9mz4xgrbv", - "depends": ["ggplot2", "ggrepel", "RColorBrewer", "reshape2", "Rtsne", "SummarizedExperiment", "umap"] + "depends": ["RColorBrewer", "Rtsne", "SummarizedExperiment", "ggplot2", "ggrepel", "reshape2", "umap"] }, "tomoseqr": { "name": "tomoseqr", "version": "1.8.0", "sha256": "14x665zaljr448gdb84d0y1hlqih7n9z2dy052y4ay22l10f8886", - "depends": ["animation", "BiocFileCache", "dplyr", "ggplot2", "plotly", "purrr", "readr", "shiny", "stringr", "tibble"] + "depends": ["BiocFileCache", "animation", "dplyr", "ggplot2", "plotly", "purrr", "readr", "shiny", "stringr", "tibble"] }, "topGO": { "name": "topGO", "version": "2.56.0", "sha256": "0ly4rai3na88dnfizsi60r6py0qmf0pw95b0hprfkvzpjyd72p75", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "GO_db", "graph", "lattice", "matrixStats", "SparseM"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "DBI", "GO_db", "SparseM", "graph", "lattice", "matrixStats"] }, "topconfects": { "name": "topconfects", @@ -12907,67 +12961,67 @@ "name": "topdownr", "version": "1.26.0", "sha256": "1axqyjlp6386shcw95mg0ljj12683ix03yk5bcxr2bqd36csfa6y", - "depends": ["Biobase", "BiocGenerics", "Biostrings", "ggplot2", "Matrix", "MSnbase", "mzR", "ProtGenerics", "PSMatch", "S4Vectors"] + "depends": ["Biobase", "BiocGenerics", "Biostrings", "MSnbase", "Matrix", "PSMatch", "ProtGenerics", "S4Vectors", "ggplot2", "mzR"] }, "tpSVG": { "name": "tpSVG", "version": "1.0.0", "sha256": "135w2w6j3cgfrkfkzmmy40ii10zp32r7xjc0pg07h2gm0hdz5yj0", - "depends": ["BiocParallel", "MatrixGenerics", "mgcv", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] + "depends": ["BiocParallel", "MatrixGenerics", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "mgcv"] }, "trackViewer": { "name": "trackViewer", "version": "1.40.0", "sha256": "01m0jwig3l6dfhd3w5aq4sx2krsipjg5jjxa78kalfrzrm6k05s4", - "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "grImport", "Gviz", "htmlwidgets", "igraph", "InteractionSet", "IRanges", "plotrix", "rhdf5", "Rsamtools", "rtracklayer", "S4Vectors", "scales", "strawr", "txdbmaker"] + "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "Gviz", "IRanges", "InteractionSet", "Rsamtools", "S4Vectors", "grImport", "htmlwidgets", "igraph", "plotrix", "rhdf5", "rtracklayer", "scales", "strawr", "txdbmaker"] }, "tracktables": { "name": "tracktables", "version": "1.38.0", "sha256": "1rfpb13sd2rqhxkywif58fm2l8ch664ga149y1nxwf409hbqb81w", - "depends": ["GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "stringr", "tractor_base", "XML", "XVector"] + "depends": ["GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "XML", "XVector", "stringr", "tractor_base"] }, "tradeSeq": { "name": "tradeSeq", "version": "1.18.0", "sha256": "1kgvvvwvj3dgb2wik3y8j44ynda94bi05vvmiwlayrypqprwi1c1", - "depends": ["Biobase", "BiocParallel", "edgeR", "ggplot2", "igraph", "magrittr", "MASS", "Matrix", "matrixStats", "mgcv", "pbapply", "princurve", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "slingshot", "SummarizedExperiment", "tibble", "TrajectoryUtils", "viridis"] + "depends": ["Biobase", "BiocParallel", "MASS", "Matrix", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "TrajectoryUtils", "edgeR", "ggplot2", "igraph", "magrittr", "matrixStats", "mgcv", "pbapply", "princurve", "slingshot", "tibble", "viridis"] }, "transcriptR": { "name": "transcriptR", "version": "1.32.0", "sha256": "1lx11dyr8q4yd57l7rj0788488amhiiahfml2m69554hk94cd46i", - "depends": ["BiocGenerics", "caret", "chipseq", "e1071", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "pROC", "reshape2", "Rsamtools", "rtracklayer", "S4Vectors"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "caret", "chipseq", "e1071", "ggplot2", "pROC", "reshape2", "rtracklayer"] }, "transcriptogramer": { "name": "transcriptogramer", "version": "1.26.0", "sha256": "0n44im93a72sihivlxn5x2k3s412b91ixqamc0wlk57vw0ppycm6", - "depends": ["biomaRt", "data_table", "doSNOW", "foreach", "ggplot2", "igraph", "limma", "progress", "RedeR", "snow", "tidyr", "topGO"] + "depends": ["RedeR", "biomaRt", "data_table", "doSNOW", "foreach", "ggplot2", "igraph", "limma", "progress", "snow", "tidyr", "topGO"] }, "transformGamPoi": { "name": "transformGamPoi", "version": "1.10.0", "sha256": "09z5d72zk6lnhjvfffpylgkk6w73wrlcasr8agy7ydy1b80cj36c", - "depends": ["DelayedArray", "glmGamPoi", "HDF5Array", "Matrix", "MatrixGenerics", "Rcpp", "SummarizedExperiment"] + "depends": ["DelayedArray", "HDF5Array", "Matrix", "MatrixGenerics", "Rcpp", "SummarizedExperiment", "glmGamPoi"] }, "transite": { "name": "transite", "version": "1.22.0", "sha256": "15r8q0j7475ccq592fiqvcxkggb8zkg6lq3zmz65jljfdggj6kn4", - "depends": ["BiocGenerics", "Biostrings", "dplyr", "GenomicRanges", "ggplot2", "gridExtra", "Rcpp", "scales", "TFMPvalue"] + "depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "Rcpp", "TFMPvalue", "dplyr", "ggplot2", "gridExtra", "scales"] }, "transmogR": { "name": "transmogR", "version": "1.0.0", "sha256": "1531h4i6jn25r451ndf7jjscfbzs1k7477v0cn0rrr5hay8i2z3s", - "depends": ["Biostrings", "BSgenome", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggplot2", "IRanges", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "ggplot2", "rlang", "scales"] }, "transomics2cytoscape": { "name": "transomics2cytoscape", "version": "1.14.0", "sha256": "1f7qdymlgqh4la1rhlk5s580ka8p4f8ravm19i02ndx50jlnq12q", - "depends": ["dplyr", "KEGGREST", "pbapply", "purrr", "RCy3", "tibble"] + "depends": ["KEGGREST", "RCy3", "dplyr", "pbapply", "purrr", "tibble"] }, "traseR": { "name": "traseR", @@ -12979,13 +13033,13 @@ "name": "traviz", "version": "1.10.0", "sha256": "1jjdfl8xvzlr31w74j12s5pdg5b1yylg1i30n804p9mqyx11g5sc", - "depends": ["Biobase", "ggplot2", "mgcv", "princurve", "RColorBrewer", "rgl", "SingleCellExperiment", "slingshot", "SummarizedExperiment", "viridis"] + "depends": ["Biobase", "RColorBrewer", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "mgcv", "princurve", "rgl", "slingshot", "viridis"] }, "treeclimbR": { "name": "treeclimbR", "version": "1.0.0", "sha256": "1ynrc06f1dh1vaa24j25naydvj4lvygcv89ssz5gv0xpmr0ydlc1", - "depends": ["ape", "diffcyt", "dirmult", "dplyr", "edgeR", "ggnewscale", "ggplot2", "ggtree", "rlang", "S4Vectors", "SummarizedExperiment", "tibble", "tidyr", "TreeSummarizedExperiment", "viridis"] + "depends": ["S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "ape", "diffcyt", "dirmult", "dplyr", "edgeR", "ggnewscale", "ggplot2", "ggtree", "rlang", "tibble", "tidyr", "viridis"] }, "treeio": { "name": "treeio", @@ -12997,13 +13051,13 @@ "name": "treekoR", "version": "1.12.0", "sha256": "02mzd9ay9fij2qr9dkrg72h7yw9jpjmqx4gz0hsjpb03akc1npqw", - "depends": ["ape", "data_table", "diffcyt", "dplyr", "edgeR", "ggiraph", "ggplot2", "ggtree", "hopach", "lme4", "multcomp", "patchwork", "SingleCellExperiment", "tidyr"] + "depends": ["SingleCellExperiment", "ape", "data_table", "diffcyt", "dplyr", "edgeR", "ggiraph", "ggplot2", "ggtree", "hopach", "lme4", "multcomp", "patchwork", "tidyr"] }, "tricycle": { "name": "tricycle", "version": "1.12.0", "sha256": "11928pcd8xzmll28m0ihi3rasc4w1i0fshn4bh9n2lyigkr5ayi4", - "depends": ["AnnotationDbi", "circular", "dplyr", "GenomicRanges", "ggnewscale", "ggplot2", "IRanges", "RColorBrewer", "S4Vectors", "scater", "scattermore", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["AnnotationDbi", "GenomicRanges", "IRanges", "RColorBrewer", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circular", "dplyr", "ggnewscale", "ggplot2", "scater", "scattermore"] }, "trigger": { "name": "trigger", @@ -13027,19 +13081,19 @@ "name": "tripr", "version": "1.10.0", "sha256": "0lh2qlqi6rxq4v5cw4qr2syyjig7iy6z3pc0d6gpr4lbhwcm50d5", - "depends": ["config", "data_table", "dplyr", "DT", "golem", "gridExtra", "plot3D", "plotly", "plyr", "RColorBrewer", "shiny", "shinyBS", "shinyFiles", "shinyjs", "stringdist", "stringr"] + "depends": ["DT", "RColorBrewer", "config", "data_table", "dplyr", "golem", "gridExtra", "plot3D", "plotly", "plyr", "shiny", "shinyBS", "shinyFiles", "shinyjs", "stringdist", "stringr"] }, "ttgsea": { "name": "ttgsea", "version": "1.12.0", "sha256": "1j09ircbzpvx661yrsnz7b6hxgsc0snm3q6gi72hcyjc9xgx46zs", - "depends": ["data_table", "DiagrammeR", "keras", "purrr", "stopwords", "text2vec", "textstem", "tm", "tokenizers"] + "depends": ["DiagrammeR", "data_table", "keras", "purrr", "stopwords", "text2vec", "textstem", "tm", "tokenizers"] }, "tweeDEseq": { "name": "tweeDEseq", "version": "1.50.0", "sha256": "0mmrp0x64k1cd0n7qqrpr191n57hciq75aw3gvfrplcfi75xb7q3", - "depends": ["cqn", "edgeR", "limma", "MASS", "Rcpp"] + "depends": ["MASS", "Rcpp", "cqn", "edgeR", "limma"] }, "twilight": { "name": "twilight", @@ -13051,25 +13105,25 @@ "name": "twoddpcr", "version": "1.28.0", "sha256": "13if809c4nxf5cprps9p9w6z1r3xxjq556315wbkyh0pw724nki0", - "depends": ["class", "ggplot2", "hexbin", "RColorBrewer", "S4Vectors", "scales", "shiny"] + "depends": ["RColorBrewer", "S4Vectors", "class", "ggplot2", "hexbin", "scales", "shiny"] }, "txcutr": { "name": "txcutr", "version": "1.10.0", "sha256": "165yfhmw8j91bx0x7kasxyiwdiy7yxzzjg4vlyic0bf2f3xvyn1g", - "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "Biostrings", "GenomicFeatures", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "txdbmaker"] + "depends": ["AnnotationDbi", "BiocGenerics", "BiocParallel", "Biostrings", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "rtracklayer", "txdbmaker"] }, "txdbmaker": { "name": "txdbmaker", - "version": "1.0.0", - "sha256": "099x6v4crp953jcgqipj0001kxg7gv5h0r4mmvh1cg7j69w0zd5m", - "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocIO", "biomaRt", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "httr", "IRanges", "rjson", "RSQLite", "rtracklayer", "S4Vectors", "UCSC_utils"] + "version": "1.0.1", + "sha256": "1nl7lr0x0kicd44gvwrdslcnnlmqaf57rgp1gb22yvz3lfzjziqi", + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "BiocIO", "DBI", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "RSQLite", "S4Vectors", "UCSC_utils", "biomaRt", "httr", "rjson", "rtracklayer"] }, "tximeta": { "name": "tximeta", "version": "1.22.1", "sha256": "0lmkxl7zlp6z4i32jyy914kiwacnz89jnd2kqma81mq81r389p06", - "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "Biostrings", "ensembldb", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "jsonlite", "Matrix", "S4Vectors", "SummarizedExperiment", "tibble", "txdbmaker", "tximport"] + "depends": ["AnnotationDbi", "AnnotationHub", "BiocFileCache", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "S4Vectors", "SummarizedExperiment", "ensembldb", "jsonlite", "tibble", "txdbmaker", "tximport"] }, "tximport": { "name": "tximport", @@ -13081,31 +13135,31 @@ "name": "uSORT", "version": "1.30.0", "sha256": "04k0763dykakv03gxvlwsp6qlg6lpzd5512p5rdq2v5dk19scvm1", - "depends": ["Biobase", "BiocGenerics", "cluster", "fpc", "gplots", "igraph", "Matrix", "monocle", "plyr", "RANN", "RSpectra", "VGAM"] + "depends": ["Biobase", "BiocGenerics", "Matrix", "RANN", "RSpectra", "VGAM", "cluster", "fpc", "gplots", "igraph", "monocle", "plyr"] }, "uncoverappLib": { "name": "uncoverappLib", "version": "1.14.0", "sha256": "17p2aqpg3q6yqplw2haazm1hhr6s0nwhghcvn3j9128n5pg2j58x", - "depends": ["BiocFileCache", "condformat", "DT", "EnsDb_Hsapiens_v75", "EnsDb_Hsapiens_v86", "GenomicRanges", "Gviz", "Homo_sapiens", "markdown", "openxlsx", "org_Hs_eg_db", "OrganismDbi", "processx", "rappdirs", "rlist", "Rsamtools", "S4Vectors", "shiny", "shinyBS", "shinycssloaders", "shinyjs", "shinyWidgets", "stringr", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["BiocFileCache", "DT", "EnsDb_Hsapiens_v75", "EnsDb_Hsapiens_v86", "GenomicRanges", "Gviz", "Homo_sapiens", "OrganismDbi", "Rsamtools", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "condformat", "markdown", "openxlsx", "org_Hs_eg_db", "processx", "rappdirs", "rlist", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "shinyjs", "stringr"] }, "universalmotif": { "name": "universalmotif", - "version": "1.22.0", - "sha256": "1kasmib3lp68pq5f9qzh38z7gpv8hik536iz16g8a73pc6bcbmzy", - "depends": ["BiocGenerics", "Biostrings", "ggplot2", "IRanges", "MASS", "MatrixGenerics", "Rcpp", "RcppThread", "rlang", "S4Vectors", "yaml"] + "version": "1.22.1", + "sha256": "0nb2xc0rw9k6nr7bgf4ip33g2cs5vnhy55ms6zkwsnd30hi69wyy", + "depends": ["BiocGenerics", "Biostrings", "IRanges", "MASS", "MatrixGenerics", "Rcpp", "RcppThread", "S4Vectors", "ggplot2", "rlang", "yaml"] }, "updateObject": { "name": "updateObject", "version": "1.8.0", "sha256": "151nma7yyhk8s67bqim6jn86p85zdq7hj0xvvpnsl78bacncca8c", - "depends": ["BiocGenerics", "digest", "S4Vectors"] + "depends": ["BiocGenerics", "S4Vectors", "digest"] }, "variancePartition": { "name": "variancePartition", "version": "1.34.0", "sha256": "00hrizpx05jfh7yrab6na10zkahm8ibrbxy4pa4dcldw65klqmn9", - "depends": ["aod", "Biobase", "BiocParallel", "corpcor", "fANCOVA", "ggplot2", "gplots", "iterators", "limma", "lme4", "lmerTest", "MASS", "Matrix", "matrixStats", "pbkrtest", "Rdpack", "remaCor", "reshape2", "RhpcBLASctl", "rlang", "scales"] + "depends": ["Biobase", "BiocParallel", "MASS", "Matrix", "Rdpack", "RhpcBLASctl", "aod", "corpcor", "fANCOVA", "ggplot2", "gplots", "iterators", "limma", "lme4", "lmerTest", "matrixStats", "pbkrtest", "remaCor", "reshape2", "rlang", "scales"] }, "vbmp": { "name": "vbmp", @@ -13115,75 +13169,75 @@ }, "velociraptor": { "name": "velociraptor", - "version": "1.14.0", - "sha256": "0sr796g3hak3vv014fvibi95fqayhjdp9qj1lyd84lc84rwhzli2", - "depends": ["basilisk", "BiocGenerics", "BiocParallel", "BiocSingular", "DelayedArray", "Matrix", "reticulate", "S4Vectors", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "zellkonverter"] + "version": "1.14.3", + "sha256": "0i8kzj79qszqaq6ynij006r80g2jacm4pmjkvv1h36mxp3a6z559", + "depends": ["BiocGenerics", "BiocParallel", "BiocSingular", "DelayedArray", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "basilisk", "reticulate", "scuttle", "zellkonverter"] }, "veloviz": { "name": "veloviz", "version": "1.10.0", "sha256": "0bni9ykffsa4zazycaki74xxwps40ngsrvq32bdr4anyhya2nk1v", - "depends": ["igraph", "Matrix", "mgcv", "Rcpp", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "igraph", "mgcv"] }, "vidger": { "name": "vidger", "version": "1.24.0", "sha256": "1ladsgxqmmff7rw6w3x8jyxba4mdk7bb4f4wgimwfgvyjmygsaqr", - "depends": ["Biobase", "DESeq2", "edgeR", "GGally", "ggplot2", "ggrepel", "knitr", "RColorBrewer", "rmarkdown", "scales", "SummarizedExperiment", "tidyr"] + "depends": ["Biobase", "DESeq2", "GGally", "RColorBrewer", "SummarizedExperiment", "edgeR", "ggplot2", "ggrepel", "knitr", "rmarkdown", "scales", "tidyr"] }, "viper": { "name": "viper", "version": "1.38.0", "sha256": "00cl6lbi56dbd8dilg0iczca87wr3572vq7i352mgfdinlw7fcyk", - "depends": ["Biobase", "e1071", "KernSmooth", "mixtools"] + "depends": ["Biobase", "KernSmooth", "e1071", "mixtools"] }, "vissE": { "name": "vissE", "version": "1.12.0", "sha256": "1bw74vjag4g90d2s29w5j51dd30xqp6k6x6vwb0ihrxfvadns5dx", - "depends": ["ggforce", "ggplot2", "ggraph", "ggrepel", "ggwordcloud", "GSEABase", "igraph", "msigdb", "plyr", "RColorBrewer", "reshape2", "scales", "scico", "textstem", "tidygraph", "tm"] + "depends": ["GSEABase", "RColorBrewer", "ggforce", "ggplot2", "ggraph", "ggrepel", "ggwordcloud", "igraph", "msigdb", "plyr", "reshape2", "scales", "scico", "textstem", "tidygraph", "tm"] }, "vsclust": { "name": "vsclust", "version": "1.6.0", "sha256": "0kb63am4aa6gmlpbczdbmxc7vwnmnnkd78ql6nizd9sfixdmiqm5", - "depends": ["limma", "matrixStats", "MultiAssayExperiment", "qvalue", "Rcpp", "shiny"] + "depends": ["MultiAssayExperiment", "Rcpp", "limma", "matrixStats", "qvalue", "shiny"] }, "vsn": { "name": "vsn", "version": "3.72.0", "sha256": "1r6cd92d4xlx4zdyy1sfaxicjf4q3arflmswpdkckkc4h9c6zf8m", - "depends": ["affy", "Biobase", "ggplot2", "lattice", "limma"] + "depends": ["Biobase", "affy", "ggplot2", "lattice", "limma"] }, "vtpnet": { "name": "vtpnet", "version": "0.44.0", "sha256": "1fi4yjh7nvrq9fzba771i32p6qhq3cl7c9sil1hpc9l4k9bxfdfp", - "depends": ["doParallel", "foreach", "GenomicRanges", "graph", "gwascat"] + "depends": ["GenomicRanges", "doParallel", "foreach", "graph", "gwascat"] }, "vulcan": { "name": "vulcan", "version": "1.26.0", "sha256": "1fimj4rbrw6wy1kl6is49v33y6c1s3n9nkanpqibkgk4g3cljxfa", - "depends": ["Biobase", "caTools", "ChIPpeakAnno", "csaw", "DESeq2", "DiffBind", "GenomicRanges", "gplots", "locfit", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "viper", "wordcloud", "zoo"] + "depends": ["Biobase", "ChIPpeakAnno", "DESeq2", "DiffBind", "GenomicRanges", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "caTools", "csaw", "gplots", "locfit", "viper", "wordcloud", "zoo"] }, "waddR": { "name": "waddR", "version": "1.18.0", "sha256": "160v6qqcx3fn657p7blq261nqclww2wic3gp0k855d3kx4i12i5l", - "depends": ["arm", "BiocFileCache", "BiocParallel", "eva", "Rcpp", "RcppArmadillo", "SingleCellExperiment"] + "depends": ["BiocFileCache", "BiocParallel", "Rcpp", "RcppArmadillo", "SingleCellExperiment", "arm", "eva"] }, "wateRmelon": { "name": "wateRmelon", "version": "2.10.0", "sha256": "19zlv9aglllsjq3jcnlw994bkanjdq0ib46k7wjsig04cx4apz1v", - "depends": ["Biobase", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "illuminaio", "limma", "lumi", "matrixStats", "methylumi", "ROC"] + "depends": ["Biobase", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "ROC", "illuminaio", "limma", "lumi", "matrixStats", "methylumi"] }, "wavClusteR": { "name": "wavClusteR", "version": "2.38.0", "sha256": "0yr4jfaxs253xg5q0kds8fm97kqacx67pw1c80yx2w79v7nqskgv", - "depends": ["BiocGenerics", "Biostrings", "foreach", "GenomicFeatures", "GenomicRanges", "ggplot2", "Hmisc", "IRanges", "mclust", "Rsamtools", "rtracklayer", "S4Vectors", "seqinr", "stringr"] + "depends": ["BiocGenerics", "Biostrings", "GenomicFeatures", "GenomicRanges", "Hmisc", "IRanges", "Rsamtools", "S4Vectors", "foreach", "ggplot2", "mclust", "rtracklayer", "seqinr", "stringr"] }, "weaver": { "name": "weaver", @@ -13195,13 +13249,13 @@ "name": "webbioc", "version": "1.76.0", "sha256": "1ws4w2kf514adk50sjadgasm7z1xvklcb8s243m12fvlg63dia9i", - "depends": ["affy", "annaffy", "Biobase", "BiocManager", "gcrma", "multtest", "qvalue", "vsn"] + "depends": ["Biobase", "BiocManager", "affy", "annaffy", "gcrma", "multtest", "qvalue", "vsn"] }, "weitrix": { "name": "weitrix", "version": "1.16.0", "sha256": "01jp94k2qlxbci1kidx4lnxkz0bf4vaj5p31c4brcmgrzv0a1pz4", - "depends": ["assertthat", "BiocGenerics", "BiocParallel", "Ckmeans_1d_dp", "DelayedArray", "DelayedMatrixStats", "dplyr", "ggplot2", "glm2", "limma", "purrr", "reshape2", "RhpcBLASctl", "rlang", "S4Vectors", "scales", "SummarizedExperiment", "topconfects"] + "depends": ["BiocGenerics", "BiocParallel", "Ckmeans_1d_dp", "DelayedArray", "DelayedMatrixStats", "RhpcBLASctl", "S4Vectors", "SummarizedExperiment", "assertthat", "dplyr", "ggplot2", "glm2", "limma", "purrr", "reshape2", "rlang", "scales", "topconfects"] }, "widgetTools": { "name": "widgetTools", @@ -13213,31 +13267,31 @@ "name": "wiggleplotr", "version": "1.28.0", "sha256": "1px7rgvaj6kks6fp7yqsqjwy4knlzgllzxsiimv8nikmbd57dmi0", - "depends": ["assertthat", "cowplot", "dplyr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "purrr", "rtracklayer", "S4Vectors"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "assertthat", "cowplot", "dplyr", "ggplot2", "purrr", "rtracklayer"] }, "wpm": { "name": "wpm", "version": "1.14.0", "sha256": "1623q58fjxnx1632fn5c5rhx0zpglbjpp7zqp15f2gch01ac0xdy", - "depends": ["Biobase", "cli", "config", "dplyr", "DT", "ggplot2", "golem", "logging", "RColorBrewer", "rlang", "shiny", "shinycustomloader", "shinydashboard", "shinyWidgets", "stringr", "SummarizedExperiment"] + "depends": ["Biobase", "DT", "RColorBrewer", "SummarizedExperiment", "cli", "config", "dplyr", "ggplot2", "golem", "logging", "rlang", "shiny", "shinyWidgets", "shinycustomloader", "shinydashboard", "stringr"] }, "wppi": { "name": "wppi", "version": "1.12.0", "sha256": "1mvr5bpsng87yl1bhd22h45830vw3sla1ysnr29px13if2q5ylmy", - "depends": ["dplyr", "igraph", "logger", "magrittr", "Matrix", "OmnipathR", "progress", "purrr", "RCurl", "rlang", "tibble", "tidyr"] + "depends": ["Matrix", "OmnipathR", "RCurl", "dplyr", "igraph", "logger", "magrittr", "progress", "purrr", "rlang", "tibble", "tidyr"] }, "xcms": { "name": "xcms", "version": "4.2.2", "sha256": "1zk9l4ll3047fj0rngvjka2hkg2by26n2h3xm1iyvfiw5068y74y", - "depends": ["Biobase", "BiocGenerics", "BiocParallel", "IRanges", "jsonlite", "lattice", "MassSpecWavelet", "MetaboCoreUtils", "MsCoreUtils", "MsExperiment", "MsFeatures", "MSnbase", "mzR", "progress", "ProtGenerics", "RColorBrewer", "S4Vectors", "Spectra", "SummarizedExperiment"] + "depends": ["Biobase", "BiocGenerics", "BiocParallel", "IRanges", "MSnbase", "MassSpecWavelet", "MetaboCoreUtils", "MsCoreUtils", "MsExperiment", "MsFeatures", "ProtGenerics", "RColorBrewer", "S4Vectors", "Spectra", "SummarizedExperiment", "jsonlite", "lattice", "mzR", "progress"] }, "xcore": { "name": "xcore", "version": "1.8.0", "sha256": "04156svl1cjbhy51d7fbgdilp832wfifg37yr9civ829iyi79fha", - "depends": ["DelayedArray", "edgeR", "foreach", "GenomicRanges", "glmnet", "IRanges", "iterators", "magrittr", "Matrix", "MultiAssayExperiment", "S4Vectors"] + "depends": ["DelayedArray", "GenomicRanges", "IRanges", "Matrix", "MultiAssayExperiment", "S4Vectors", "edgeR", "foreach", "glmnet", "iterators", "magrittr"] }, "xmapbridge": { "name": "xmapbridge", @@ -13249,37 +13303,37 @@ "name": "yamss", "version": "1.30.0", "sha256": "0l9wqijwlq1gwybj2fy6jwgq6ja1mvx8yfdv174g5mjflx8nmc06", - "depends": ["BiocGenerics", "data_table", "EBImage", "IRanges", "limma", "Matrix", "mzR", "S4Vectors", "SummarizedExperiment"] + "depends": ["BiocGenerics", "EBImage", "IRanges", "Matrix", "S4Vectors", "SummarizedExperiment", "data_table", "limma", "mzR"] }, "yarn": { "name": "yarn", "version": "1.30.0", "sha256": "1r0dj65i8xg1yb6x7ggb3s40hvzbh596k2g9bxblsbl18z867ydp", - "depends": ["Biobase", "biomaRt", "downloader", "edgeR", "gplots", "limma", "matrixStats", "preprocessCore", "quantro", "RColorBrewer", "readr"] + "depends": ["Biobase", "RColorBrewer", "biomaRt", "downloader", "edgeR", "gplots", "limma", "matrixStats", "preprocessCore", "quantro", "readr"] }, "zFPKM": { "name": "zFPKM", "version": "1.26.0", "sha256": "1pgmw41xdq9gd2shc6kawgxz9sw1ydlgs0p35k99k2v50f86r2wy", - "depends": ["checkmate", "dplyr", "ggplot2", "SummarizedExperiment", "tidyr"] + "depends": ["SummarizedExperiment", "checkmate", "dplyr", "ggplot2", "tidyr"] }, "zellkonverter": { "name": "zellkonverter", - "version": "1.14.0", - "sha256": "13qkj9adv5is4fas667kxzc2zgni3ayl5hbimakq8y4mw6qj04dn", - "depends": ["basilisk", "cli", "DelayedArray", "Matrix", "reticulate", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] + "version": "1.14.1", + "sha256": "1fyy3v1papg46cclk5fg8iqmg0671ccr82alvv41hk5d85ck04aq", + "depends": ["DelayedArray", "Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "basilisk", "cli", "reticulate"] }, "zenith": { "name": "zenith", "version": "1.6.0", "sha256": "14mj5flig4f0s3qgny26wj8l50d5f8bdp66gnh83wsqnln784x8m", - "depends": ["EnrichmentBrowser", "ggplot2", "GSEABase", "limma", "msigdbr", "progress", "Rdpack", "reshape2", "Rfast", "tidyr", "variancePartition"] + "depends": ["EnrichmentBrowser", "GSEABase", "Rdpack", "Rfast", "ggplot2", "limma", "msigdbr", "progress", "reshape2", "tidyr", "variancePartition"] }, "zinbwave": { "name": "zinbwave", "version": "1.26.0", "sha256": "07zlvzfs1c4gcj9hwgqbjhgbrffi301620chrf5lvzly4v7hafwi", - "depends": ["BiocParallel", "edgeR", "genefilter", "Matrix", "SingleCellExperiment", "softImpute", "SummarizedExperiment"] + "depends": ["BiocParallel", "Matrix", "SingleCellExperiment", "SummarizedExperiment", "edgeR", "genefilter", "softImpute"] }, "zlibbioc": { "name": "zlibbioc", @@ -13357,13 +13411,6 @@ "depends": ["DESeq2", "GenomeInfoDb", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment"], "broken": true }, - "BgeeCall": { - "name": "BgeeCall", - "version": "1.18.1", - "sha256": "1ipypkyfqx6mahiwl0gzdsi7z9j9cm5rgfw4ybgh6blfq8kg9qyk", - "depends": ["biomaRt", "Biostrings", "data_table", "dplyr", "GenomicFeatures", "jsonlite", "rhdf5", "rslurm", "rtracklayer", "sjmisc", "tximport"], - "broken": true - }, "BioMM": { "name": "BioMM", "version": "1.15.0", @@ -13469,13 +13516,6 @@ "depends": ["BiocGenerics", "Biostrings", "dplyr", "forcats", "generics", "glue", "Matrix", "progress", "purrr", "Rcpp", "reshape2", "rlang", "S4Vectors", "stringr", "tibble", "tidyr"], "broken": true }, - "Cepo": { - "name": "Cepo", - "version": "1.8.0", - "sha256": "0s1zra4msgbp37r5lp0zs9j2aq054rcmrmhwi3liwp4wkvjbshw8", - "depends": ["BiocParallel", "DelayedArray", "DelayedMatrixStats", "dplyr", "ggplot2", "GSEABase", "HDF5Array", "patchwork", "reshape2", "rlang", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"], - "broken": true - }, "ChIC": { "name": "ChIC", "version": "1.19.0", @@ -14085,13 +14125,6 @@ "depends": ["corpcor", "limma"], "broken": true }, - "SGCP": { - "name": "SGCP", - "version": "1.2.0", - "sha256": "1cc0brhw77b73nircb3n2ghbihdjmk7l11s8nmkvljydx6b52sja", - "depends": ["annotate", "caret", "DescTools", "dplyr", "expm", "genefilter", "ggplot2", "ggridges", "GO_db", "GOstats", "graph", "openxlsx", "org_Hs_eg_db", "plyr", "RColorBrewer", "reshape2", "Rgraphviz", "RSpectra", "SummarizedExperiment", "xtable"], - "broken": true - }, "SISPA": { "name": "SISPA", "version": "1.30.0", @@ -14113,13 +14146,6 @@ "depends": [], "broken": true }, - "SPONGE": { - "name": "SPONGE", - "version": "1.22.0", - "sha256": "1ayvigqj5j7s7031gpyhaz3m3z85w9j8j850pggshy9gixvy1mnp", - "depends": ["Biobase", "biomaRt", "caret", "ComplexHeatmap", "cvms", "data_table", "doRNG", "dplyr", "expm", "foreach", "ggplot2", "ggpubr", "ggridges", "glmnet", "gRbase", "igraph", "iterators", "logging", "MASS", "MetBrewer", "miRBaseConverter", "ppcor", "randomForest", "rlang", "stringr", "tidyr", "tidyverse", "tnet"], - "broken": true - }, "SQUADD": { "name": "SQUADD", "version": "1.52.0", @@ -14344,13 +14370,6 @@ "depends": ["Biobase", "BiocParallel", "cluster", "dplyr", "GenomicRanges", "gplots", "IRanges", "lazyeval", "magrittr", "matrixStats", "NMF", "rtracklayer", "S4Vectors", "tidyr"], "broken": true }, - "cliqueMS": { - "name": "cliqueMS", - "version": "1.16.0", - "sha256": "1829i6vqplqyvibb7x6ahb7xk0z2s8amivjldnvr17d7hpggmqma", - "depends": ["BH", "igraph", "matrixStats", "MSnbase", "Rcpp", "RcppArmadillo", "xcms"], - "broken": true - }, "clonotypeR": { "name": "clonotypeR", "version": "1.34.0", @@ -14673,13 +14692,6 @@ "depends": ["SummarizedExperiment"], "broken": true }, - "miRspongeR": { - "name": "miRspongeR", - "version": "2.4.0", - "sha256": "1mzh0cjm2sbcxw3wgfa6yg98ynl74x41g15vsf54n1m1ys5s7xk0", - "depends": ["clusterProfiler", "corpcor", "doParallel", "DOSE", "foreach", "igraph", "linkcomm", "MCL", "org_Hs_eg_db", "Rcpp", "ReactomePA", "SPONGE", "survival"], - "broken": true - }, "multiOmicsViz": { "name": "multiOmicsViz", "version": "1.24.0", @@ -14876,13 +14888,6 @@ "depends": ["ape", "caret", "data_tree", "dplyr", "e1071", "ggplot2", "kernlab", "pROC", "ROCR", "Seurat", "SingleCellExperiment", "SummarizedExperiment"], "broken": true }, - "scClassify": { - "name": "scClassify", - "version": "1.14.0", - "sha256": "1il45fr3fq520jg2hi1b729wg82vhr826x9bh6lli743sjl2rmbf", - "depends": ["BiocParallel", "Cepo", "cluster", "diptest", "ggplot2", "ggraph", "hopach", "igraph", "limma", "Matrix", "mgcv", "minpack_lm", "mixtools", "proxy", "proxyC", "S4Vectors", "statmod"], - "broken": true - }, "scMAGeCK": { "name": "scMAGeCK", "version": "1.9.1", @@ -14946,13 +14951,6 @@ "depends": ["affy", "affyio"], "broken": true }, - "tenXplore": { - "name": "tenXplore", - "version": "1.24.0", - "sha256": "1sk8xxvrmxkqlz7hq6w10hsjf1x8g06gbaas75hx4m0f1hz6pdwm", - "depends": ["AnnotationDbi", "matrixStats", "ontoProc", "org_Mm_eg_db", "restfulSE", "shiny", "SummarizedExperiment"], - "broken": true - }, "tofsims": { "name": "tofsims", "version": "1.22.0", diff --git a/pkgs/development/r-modules/cran-packages.json b/pkgs/development/r-modules/cran-packages.json index 61021575dbca..5026cbfc196a 100644 --- a/pkgs/development/r-modules/cran-packages.json +++ b/pkgs/development/r-modules/cran-packages.json @@ -9,8 +9,8 @@ }, "AATtools": { "name": "AATtools", - "version": "0.0.2", - "sha256": "10adwxyqnbjw2a0pxrp4qbs68fn2bdxwcbaqmvx5xfgrj4skl68z", + "version": "0.0.3", + "sha256": "0sn8sc25syvni45w99h76z0als91a9cc4jg3visp81dqw1z4mml9", "depends": ["doParallel", "dplyr", "foreach", "magrittr"] }, "ABACUS": { @@ -77,7 +77,7 @@ "name": "ACDm", "version": "1.0.4.3", "sha256": "0g89827az5mnllp6l71znbvwxzygb8nvnmsv6x052w2ajhd16v7v", - "depends": ["dplyr", "ggplot2", "plyr", "Rsolnp", "zoo"] + "depends": ["Rsolnp", "dplyr", "ggplot2", "plyr", "zoo"] }, "ACE_CoCo": { "name": "ACE.CoCo", @@ -113,7 +113,13 @@ "name": "ACNE", "version": "0.9.1", "sha256": "12i1b5bbdn4wz80p8v6xygap7pkgdvidxmsd927ks7qf1yvaq93k", - "depends": ["aroma_affymetrix", "aroma_core", "MASS", "matrixStats", "R_filesets", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["MASS", "R_filesets", "R_methodsS3", "R_oo", "R_utils", "aroma_affymetrix", "aroma_core", "matrixStats"] + }, + "ACSSpack": { + "name": "ACSSpack", + "version": "0.0.1.4", + "sha256": "18xj0svysm9qm6dyhx7ib2krwcfds8i3rrcd03ph3kz597vf41zi", + "depends": ["HDCI", "MASS", "Rcpp", "RcppArmadillo", "extraDistr"] }, "ACSWR": { "name": "ACSWR", @@ -131,7 +137,7 @@ "name": "ACV", "version": "1.0.2", "sha256": "078n1if2rkbdhivrzp3lsq35a8awrf5y3s7fi3f5l21a9dmrk4d1", - "depends": ["forecast", "Matrix"] + "depends": ["Matrix", "forecast"] }, "ACWR": { "name": "ACWR", @@ -155,7 +161,7 @@ "name": "ADDT", "version": "2.0", "sha256": "044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp", - "depends": ["coneproj", "Matrix", "nlme"] + "depends": ["Matrix", "coneproj", "nlme"] }, "ADER": { "name": "ADER", @@ -179,13 +185,13 @@ "name": "ADMM", "version": "0.3.3", "sha256": "04biinzr0x3jkwss00q6zxfnzk62dafc6386z5vfqs4ch0ifh60n", - "depends": ["doParallel", "foreach", "Matrix", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "doParallel", "foreach"] }, "ADMMsigma": { "name": "ADMMsigma", "version": "2.1", "sha256": "1943dza086s22pr0yz41wzn9cdg11x7fl9zr3w012865yj219m7l", - "depends": ["doParallel", "dplyr", "foreach", "ggplot2", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "doParallel", "dplyr", "foreach", "ggplot2"] }, "ADMUR": { "name": "ADMUR", @@ -239,7 +245,7 @@ "name": "AER", "version": "1.2-12", "sha256": "11pas7lglcw1h5649bgab13g8xlnx109pc2aqphwc3fdgvqv1ism", - "depends": ["car", "Formula", "lmtest", "sandwich", "survival", "zoo"] + "depends": ["Formula", "car", "lmtest", "sandwich", "survival", "zoo"] }, "AEenrich": { "name": "AEenrich", @@ -299,7 +305,7 @@ "name": "AHM", "version": "1.0.1", "sha256": "00r1rn7d64a18rckbxvla5yapqv00p9ajxv72fx7s6p80kfal89w", - "depends": ["devtools", "dplyr", "glmnet", "Matrix", "mixexp", "plgp", "quadprog", "tibble", "tidyr"] + "depends": ["Matrix", "devtools", "dplyr", "glmnet", "mixexp", "plgp", "quadprog", "tibble", "tidyr"] }, "AHMbook": { "name": "AHMbook", @@ -327,8 +333,8 @@ }, "AHPtools": { "name": "AHPtools", - "version": "0.2.1", - "sha256": "1bmk7mcg3ma0d4a3gy5s3zkkw49nfbg6rh5ji9qvi99rj6ksfcry", + "version": "0.3.0", + "sha256": "053lk31xsv4hipah0px5xpxyd0s798pq08qpcynygkf84hjja2x0", "depends": [] }, "AHSurv": { @@ -347,25 +353,25 @@ "name": "AICcmodavg", "version": "2.3-3", "sha256": "0ylzd6fz5p86fdb8yily2v8bn8xz5mm6w19ch6gpp48jzkqvama0", - "depends": ["lattice", "MASS", "Matrix", "nlme", "survival", "unmarked", "VGAM", "xtable"] + "depends": ["MASS", "Matrix", "VGAM", "lattice", "nlme", "survival", "unmarked", "xtable"] }, "AID": { "name": "AID", "version": "2.9", "sha256": "0s7020vh93rnyhcfsmsn1swffrbg1fx3pqq2bd043m4b90yrlzpc", - "depends": ["ggplot2", "MASS", "meta", "nortest", "psych", "stringr", "tseries"] + "depends": ["MASS", "ggplot2", "meta", "nortest", "psych", "stringr", "tseries"] }, "AIPW": { "name": "AIPW", "version": "0.6.3.2", "sha256": "1iqq665qigw9dmc62x2dz1nvrk8s65ph0a3k2p7mkznr9frshhi2", - "depends": ["future_apply", "ggplot2", "progressr", "R6", "Rsolnp", "SuperLearner"] + "depends": ["R6", "Rsolnp", "SuperLearner", "future_apply", "ggplot2", "progressr"] }, "AIUQ": { "name": "AIUQ", - "version": "0.5.2", - "sha256": "00abxp3sd5ri4rny38q0125i8bb71hv5riicd7m8n9hz9hgww12j", - "depends": ["fftwtools", "plot3D", "SuperGauss"] + "version": "0.5.3", + "sha256": "0bbqckp0s9f9ljp0b8z65pzfh3hhfp910ca7hsivwi9j7vr61jaz", + "depends": ["SuperGauss", "fftwtools", "plot3D"] }, "ALDqr": { "name": "ALDqr", @@ -449,7 +455,7 @@ "name": "AMPLE", "version": "1.0.2", "sha256": "019r60rcx3biyicmyc4i1806d31i2hp107ba2l0mgh08fx3lfwhj", - "depends": ["ggplot2", "markdown", "R6", "RColorBrewer", "scales", "shiny", "shinyjs", "shinyscreenshot"] + "depends": ["R6", "RColorBrewer", "ggplot2", "markdown", "scales", "shiny", "shinyjs", "shinyscreenshot"] }, "AMR": { "name": "AMR", @@ -461,25 +467,25 @@ "name": "ANN2", "version": "2.3.4", "sha256": "1izljhz3rkzq05dkvg9q3fdyj7q871j8lsky67d5r8ffpzm1lk3z", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "reshape2", "testthat", "viridisLite"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "reshape2", "testthat", "viridisLite"] }, "ANOFA": { "name": "ANOFA", "version": "0.1.3", "sha256": "1ywcn4sq626dc3bb7r3pwddw5064cli4kmx8a9qp2dnxv9i6igjv", - "depends": ["ggplot2", "Rdpack", "rrapply", "superb"] + "depends": ["Rdpack", "ggplot2", "rrapply", "superb"] }, "ANOM": { "name": "ANOM", "version": "0.5", "sha256": "14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz", - "depends": ["ggplot2", "MCPAN", "multcomp", "nparcomp", "SimComp"] + "depends": ["MCPAN", "SimComp", "ggplot2", "multcomp", "nparcomp"] }, "ANOPA": { "name": "ANOPA", "version": "0.1.3", "sha256": "1i6flm4rwl0d0wmw001pwq45jysxb2d2bld25r10gjk3xlfrbr7i", - "depends": ["ggplot2", "plyr", "Rdpack", "rrapply", "scales", "superb"] + "depends": ["Rdpack", "ggplot2", "plyr", "rrapply", "scales", "superb"] }, "ANOVAIREVA": { "name": "ANOVAIREVA", @@ -491,13 +497,13 @@ "name": "ANOVAShiny", "version": "0.1.0", "sha256": "1z8wi8c8j3rlchfk1vx101qz1r9j2jl5lfh72y5lqsisqxl2fyyz", - "depends": ["DescTools", "dplyr", "HH", "rhandsontable", "rmarkdown", "shiny"] + "depends": ["DescTools", "HH", "dplyr", "rhandsontable", "rmarkdown", "shiny"] }, "ANOVAShiny2": { "name": "ANOVAShiny2", "version": "0.1.0", "sha256": "0bnxfg5c37wi5g53jd0zqq31yx29zvlk2m2jh6jlwki8khpp9y00", - "depends": ["DescTools", "dplyr", "HH", "rhandsontable", "rmarkdown", "shiny"] + "depends": ["DescTools", "HH", "dplyr", "rhandsontable", "rmarkdown", "shiny"] }, "ANSM5": { "name": "ANSM5", @@ -519,8 +525,8 @@ }, "APCalign": { "name": "APCalign", - "version": "1.0.1", - "sha256": "0v1m3m6r85yip449pcbn7vk3c4zm0y3w4lf9rwqv3cis8gd9xfap", + "version": "1.0.2", + "sha256": "1zd50bhq0amrpk53r2hgfzawb2fqinck02vnfglnwgdbkddx6vn3", "depends": ["arrow", "crayon", "curl", "dplyr", "httr", "jsonlite", "purrr", "readr", "rlang", "stringdist", "stringi", "stringr"] }, "APCanalysis": { @@ -545,7 +551,7 @@ "name": "APIS", "version": "2.0.4", "sha256": "02s7cpzsp53wk3k4cm6l3hpkc3f191zhg22vwbf8va7dni3d24rq", - "depends": ["cowplot", "data_table", "doParallel", "dplyr", "DT", "foreach", "ggplot2", "gridExtra", "htmltools", "plotly", "rlang", "shiny", "shinyBS", "shinythemes"] + "depends": ["DT", "cowplot", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "htmltools", "plotly", "rlang", "shiny", "shinyBS", "shinythemes"] }, "APPEstimation": { "name": "APPEstimation", @@ -557,7 +563,7 @@ "name": "APackOfTheClones", "version": "1.2.0", "sha256": "1wirzf37n5xl0y3g9n9ic6vyaiyzmx9sip1qg4bilaqn7nazmq90", - "depends": ["dplyr", "ggforce", "ggplot2", "hash", "lifecycle", "magrittr", "Rcpp", "rlang", "Seurat", "SeuratObject"] + "depends": ["Rcpp", "Seurat", "SeuratObject", "dplyr", "ggforce", "ggplot2", "hash", "lifecycle", "magrittr", "rlang"] }, "APtools": { "name": "APtools", @@ -585,8 +591,8 @@ }, "AQuality": { "name": "AQuality", - "version": "1.0", - "sha256": "0zjv5wwdr4ivm1nx1yw27n1fxajxv9mdljd5jj95bv2wpvkn0pcz", + "version": "1.1", + "sha256": "17sd90va6wp6vyg1bjriyv0zkn1hqnrwkm2w92yc0n2kbdffq74l", "depends": [] }, "AR": { @@ -599,19 +605,13 @@ "name": "ARCensReg", "version": "3.0.1", "sha256": "0qrzxa93cj1ql4iw93ksk58ycfgmncry7q29axhydwh9hsh3lyms", - "depends": ["ggplot2", "gridExtra", "matrixcalc", "msm", "mvtnorm", "numDeriv", "qqplotr", "Rcpp", "RcppArmadillo", "Rdpack", "tmvtnorm"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "ggplot2", "gridExtra", "matrixcalc", "msm", "mvtnorm", "numDeriv", "qqplotr", "tmvtnorm"] }, "ARCokrig": { "name": "ARCokrig", "version": "0.1.2", "sha256": "0pk0y0gsw681py0vwizxvh1jqjnapzqfr0mbdpli1sray55xbjr2", - "depends": ["ggplot2", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppEigen"] - }, - "ARDECO": { - "name": "ARDECO", - "version": "1.0.1", - "sha256": "1m249r65kh18v57wlhg9fv26fla5sbxqfqm725f95677ck852jf2", - "depends": ["dplyr", "ghql", "httr", "jsonlite", "rjstat", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "ggplot2", "mvtnorm"] }, "ARDL": { "name": "ARDL", @@ -623,7 +623,7 @@ "name": "ARGOS", "version": "0.1.1", "sha256": "0qjngax72mz4zhqlb7s8zzl0n3524crp67vmz3mpy2s5hdl3kz83", - "depends": ["boot", "deSolve", "glmnet", "magrittr", "Matrix", "Metrics", "signal", "tidyr", "tidyverse"] + "depends": ["Matrix", "Metrics", "boot", "deSolve", "glmnet", "magrittr", "signal", "tidyr", "tidyverse"] }, "ARHT": { "name": "ARHT", @@ -641,7 +641,7 @@ "name": "ARIbrain", "version": "0.2", "sha256": "18c7yxkrnqh18gcfzvdc5wqig6ywdmjcy8rlz0fdj3b8fb84dfpr", - "depends": ["hommel", "plyr", "RNifti"] + "depends": ["RNifti", "hommel", "plyr"] }, "ARMALSTM": { "name": "ARMALSTM", @@ -649,12 +649,6 @@ "sha256": "0qb0ll79n7j2zcgb0ng5mqzlcil6rg5mfpyygk8rkvqf05l8fxkl", "depends": ["keras", "reticulate", "rugarch", "tensorflow", "tseries"] }, - "AROC": { - "name": "AROC", - "version": "1.0-4", - "sha256": "0wwv63mlh8pl5pzaih57l2qy70fz2wpfyxns1lyp95sxhq7ddwza", - "depends": ["Hmisc", "MASS", "Matrix", "moments", "nor1mix", "np", "spatstat_geom"] - }, "ARPALData": { "name": "ARPALData", "version": "1.5.2", @@ -695,7 +689,7 @@ "name": "ARpLMEC", "version": "2.4.1", "sha256": "1d6gvgbnj19dislzjlxn7i0iq7h56zz7hm9x5l865ji790b9smqw", - "depends": ["expm", "LaplacesDemon", "MASS", "mnormt", "numDeriv", "relliptical", "TruncatedNormal"] + "depends": ["LaplacesDemon", "MASS", "TruncatedNormal", "expm", "mnormt", "numDeriv", "relliptical"] }, "ASGS_foyer": { "name": "ASGS.foyer", @@ -707,13 +701,19 @@ "name": "ASMap", "version": "1.0-7", "sha256": "04byjdz3dzgf06bmmpvslihya23lanl8dmjbq22vvwlhi82f88im", - "depends": ["fields", "gtools", "lattice", "qtl", "RColorBrewer"] + "depends": ["RColorBrewer", "fields", "gtools", "lattice", "qtl"] + }, + "ASMbook": { + "name": "ASMbook", + "version": "1.0.2", + "sha256": "18nprjb54kr5yvpfnmji8p5a9ggc33h5wkgvni567rdsnq7jv0d7", + "depends": ["MASS", "TMB", "coda", "lattice"] }, "ASRgenomics": { "name": "ASRgenomics", "version": "1.1.4", "sha256": "1k6qyp5ac8q3z7ifbqv2kkryh27ii0zbfmlcjl6i3y7s1mfyigg8", - "depends": ["AGHmatrix", "cowplot", "crayon", "data_table", "ellipse", "factoextra", "ggplot2", "Matrix", "scattermore", "superheat"] + "depends": ["AGHmatrix", "Matrix", "cowplot", "crayon", "data_table", "ellipse", "factoextra", "ggplot2", "scattermore", "superheat"] }, "ASSA": { "name": "ASSA", @@ -725,7 +725,7 @@ "name": "ASSISTant", "version": "1.4.3", "sha256": "0apaj4lfkbg08xrw8mknf50s1vyd4j5mbwciwgblq7ydh3pyjxaj", - "depends": ["dplyr", "knitr", "magrittr", "mvtnorm", "R6"] + "depends": ["R6", "dplyr", "knitr", "magrittr", "mvtnorm"] }, "AST": { "name": "AST", @@ -737,19 +737,25 @@ "name": "ASV", "version": "1.1.4", "sha256": "15k6gls2bcwnvpkqyz6jnhzk96rcnjdnxv63kh7zzp2qbidh27hb", - "depends": ["freqdom", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "freqdom"] }, "ATAforecasting": { "name": "ATAforecasting", "version": "0.0.60", "sha256": "0q21dg4p9xw28r3q0ayf2bvwwyccilw93849x4c7k82xpyfnwvpb", - "depends": ["forecast", "Rcpp", "RcppArmadillo", "Rdpack", "seasonal", "stlplus", "stR", "timeSeries", "TSA", "tseries", "xts"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "TSA", "forecast", "seasonal", "stR", "stlplus", "timeSeries", "tseries", "xts"] }, "ATNr": { "name": "ATNr", "version": "1.1.0", "sha256": "1wlzw5565hprlphjp3jrgyhmgqdbrzwka4m1ac7rhxdgljdfh2j5", - "depends": ["deSolve", "R_rsp", "Rcpp", "RcppArmadillo"] + "depends": ["R_rsp", "Rcpp", "RcppArmadillo", "deSolve"] + }, + "ATQ": { + "name": "ATQ", + "version": "0.2.3", + "sha256": "1hj1phyr8mr7xfbaizmsfh5j36paa6xlyg83v4vryplikba617gm", + "depends": ["dplyr", "ggplot2", "gridExtra", "purrr", "rlang", "scales", "zoo"] }, "ATR": { "name": "ATR", @@ -779,7 +785,7 @@ "name": "AVGAS", "version": "0.1.0", "sha256": "0s0h6rpsni73a0j679g22ngpaazdfifxpi7mwpa7ac3p0kdzvji0", - "depends": ["dplyr", "ggplot2", "Matrix", "pracma", "selectiveInference", "VariableScreening"] + "depends": ["Matrix", "VariableScreening", "dplyr", "ggplot2", "pracma", "selectiveInference"] }, "AWR": { "name": "AWR", @@ -797,7 +803,7 @@ "name": "AZIAD", "version": "0.0.3", "sha256": "0nzd3y4kcb628f1h0xpslx2nva8pv6i3mmp9vm5c49xiq43d82cz", - "depends": ["corpcor", "doParallel", "EnvStats", "extraDistr", "foreach", "QRM"] + "depends": ["EnvStats", "QRM", "corpcor", "doParallel", "extraDistr", "foreach"] }, "AalenJohansen": { "name": "AalenJohansen", @@ -827,7 +833,7 @@ "name": "AcceptReject", "version": "0.1.2", "sha256": "137qlqkazh665d7wvxkhxfz2a5ss3hy4acbc6jzbk7vq4qpbcj0i", - "depends": ["assertthat", "cli", "ggplot2", "glue", "numDeriv", "purrr", "Rcpp", "RcppArmadillo", "rlang", "scales", "scattermore"] + "depends": ["Rcpp", "RcppArmadillo", "assertthat", "cli", "ggplot2", "glue", "numDeriv", "purrr", "rlang", "scales", "scattermore"] }, "AcceptanceSampling": { "name": "AcceptanceSampling", @@ -839,7 +845,7 @@ "name": "Achilles", "version": "1.7.2", "sha256": "1xkhplw7jpz7y86nac2z5vk2xs898kfv6apmk3rahjr0rmdijdqg", - "depends": ["data_table", "DatabaseConnector", "dplyr", "jsonlite", "lubridate", "ParallelLogger", "readr", "rlang", "SqlRender", "tseries"] + "depends": ["DatabaseConnector", "ParallelLogger", "SqlRender", "data_table", "dplyr", "jsonlite", "lubridate", "readr", "rlang", "tseries"] }, "AcousticNDLCodeR": { "name": "AcousticNDLCodeR", @@ -865,6 +871,12 @@ "sha256": "08r3gwjz4fkyy85dxqix0ffm5xyq45032qv3snnzxnlqxslxbqn1", "depends": ["accelerometry", "dplyr", "ineq", "survival", "tidyr"] }, + "ActiSleep": { + "name": "ActiSleep", + "version": "0.2.2", + "sha256": "0byms52rk9snsr6z400qidbvpnfxxn0idv1hr9k3whbadr3nxyxi", + "depends": ["DBI", "RSQLite", "accelerometry", "dplyr", "lazyeval", "lubridate", "stringr", "tibble"] + }, "ActiveDriver": { "name": "ActiveDriver", "version": "1.0.0", @@ -873,15 +885,15 @@ }, "ActivePathways": { "name": "ActivePathways", - "version": "2.0.3", - "sha256": "0mgvxpqaq0jncr1kzmwhqkv3pajx2fz6vwhv5arw7fgla6w09p9h", + "version": "2.0.5", + "sha256": "098p21g7rm3q03wifg0zb71ldg3dyqp3iwhqmg3ci9r73dl4agjh", "depends": ["data_table", "ggplot2"] }, "ActivityIndex": { "name": "ActivityIndex", "version": "0.3.7", "sha256": "1zj2b6x31a1kxl80rarmkrlm7ack4154mrkbqs3fpi48zpmjbgd5", - "depends": ["data_table", "matrixStats", "R_utils"] + "depends": ["R_utils", "data_table", "matrixStats"] }, "ActuarialM": { "name": "ActuarialM", @@ -895,6 +907,12 @@ "sha256": "0f0iclmnwdc8ixiiai4svk4x1g3pjy7dhm3cm58fv6ckx12d3d2l", "depends": ["fftwtools", "imager", "plotrix"] }, + "AdIsMF": { + "name": "AdIsMF", + "version": "0.1.0", + "sha256": "1ddwnn6jmj0sm1b9mxdaa88rngn4vfw59malqqg5whq0hnl4mhwx", + "depends": ["AICcmodavg", "ggplot2", "nls2"] + }, "AdMit": { "name": "AdMit", "version": "2.1.9", @@ -905,7 +923,7 @@ "name": "AdaSampling", "version": "1.3", "sha256": "1c8dh8lxyb076317n4qk2g3qv5j4mc1dszbh3k1p2b0nxiprqk5i", - "depends": ["caret", "class", "e1071", "MASS"] + "depends": ["MASS", "caret", "class", "e1071"] }, "AdapSamp": { "name": "AdapSamp", @@ -917,7 +935,7 @@ "name": "AdaptGauss", "version": "1.6", "sha256": "04w0v2fv9ixfz148d8f5vv7w5ypdywwf1qysk2ypc7a7md4vv9qz", - "depends": ["DataVisualizations", "plotly", "pracma", "Rcpp", "shiny"] + "depends": ["DataVisualizations", "Rcpp", "plotly", "pracma", "shiny"] }, "AdequacyModel": { "name": "AdequacyModel", @@ -935,7 +953,7 @@ "name": "AdhereRViz", "version": "0.2.1", "sha256": "1jc5mfdydw9s515zi7lsmns79919vrdhh6lvh9z2bq0lrn9g1yci", - "depends": ["AdhereR", "clipr", "colourpicker", "data_table", "DBI", "highlight", "knitr", "manipulate", "RMariaDB", "RSQLite", "shiny", "shinyjs", "shinyWidgets", "V8", "viridisLite"] + "depends": ["AdhereR", "DBI", "RMariaDB", "RSQLite", "V8", "clipr", "colourpicker", "data_table", "highlight", "knitr", "manipulate", "shiny", "shinyWidgets", "shinyjs", "viridisLite"] }, "AdvBinomApps": { "name": "AdvBinomApps", @@ -971,7 +989,7 @@ "name": "AggregateR", "version": "0.1.1", "sha256": "1s2q888bqx6ilisv5s4g8ryja97nz6cz4ycm4sw1i63l5wjrwljc", - "depends": ["data_table", "NCmisc", "tibble"] + "depends": ["NCmisc", "data_table", "tibble"] }, "AgreementInterval": { "name": "AgreementInterval", @@ -983,7 +1001,7 @@ "name": "AgroR", "version": "1.3.6", "sha256": "0gbdba18fzk3x32wk1ycbj2ci8y1dpdmcysnmdd2361mp5yhvn7h", - "depends": ["cowplot", "crayon", "drc", "dunn_test", "emmeans", "ggplot2", "ggrepel", "gridExtra", "gtools", "knitr", "lme4", "lmtest", "MASS", "multcomp", "multcompView", "nortest", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "cowplot", "crayon", "drc", "dunn_test", "emmeans", "ggplot2", "ggrepel", "gridExtra", "gtools", "knitr", "lme4", "lmtest", "multcomp", "multcompView", "nortest"] }, "AgroReg": { "name": "AgroReg", @@ -1007,7 +1025,7 @@ "name": "AirMonitor", "version": "0.4.0", "sha256": "1lxdnplv06g5j5lwiydgx3yimrpkm85i88cxq7yrpv2gcffalj4p", - "depends": ["dplyr", "dygraphs", "leaflet", "lubridate", "magrittr", "MazamaCoreUtils", "MazamaRollUtils", "MazamaTimeSeries", "readr", "rlang", "stringr", "tidyselect", "xts"] + "depends": ["MazamaCoreUtils", "MazamaRollUtils", "MazamaTimeSeries", "dplyr", "dygraphs", "leaflet", "lubridate", "magrittr", "readr", "rlang", "stringr", "tidyselect", "xts"] }, "Ake": { "name": "Ake", @@ -1043,13 +1061,13 @@ "name": "AlleleShift", "version": "1.1-2", "sha256": "1lv7ap40bc6l1wp68lbxyavl9dky1mz09zbdjg9kyf1b9ca5siqx", - "depends": ["adegenet", "BiodiversityR", "vegan"] + "depends": ["BiodiversityR", "adegenet", "vegan"] }, "AllelicSeries": { "name": "AllelicSeries", "version": "0.0.4.1", "sha256": "1i9p2hzi61mvl5gxcs7rlavcl70pvjscnqjlxms35n4ziq3hzrk0", - "depends": ["Rcpp", "RcppArmadillo", "RNOmni", "SKAT"] + "depends": ["RNOmni", "Rcpp", "RcppArmadillo", "SKAT"] }, "Allspice": { "name": "Allspice", @@ -1061,12 +1079,12 @@ "name": "AlphaPart", "version": "0.9.8", "sha256": "1ih76v3kgnladqq3nvlqrz5sqkg1j97m778kchz6k05cjxhj8l4q", - "depends": ["directlabels", "dplyr", "ggplot2", "magrittr", "pedigree", "Rcpp", "reshape", "tibble"] + "depends": ["Rcpp", "directlabels", "dplyr", "ggplot2", "magrittr", "pedigree", "reshape", "tibble"] }, "AlphaSimR": { "name": "AlphaSimR", - "version": "1.5.3", - "sha256": "1qv3bfn4xnpkiblzdig1zn3cli5g1h2binnsi4znxzd6z1406sq9", + "version": "1.6.0", + "sha256": "02cz2kppvw9ccx99r0i5afhqcprv1qsdbjq14r9v6b3pcpvsdvia", "depends": ["BH", "R6", "Rcpp", "RcppArmadillo", "Rdpack"] }, "AlteredPQR": { @@ -1079,7 +1097,7 @@ "name": "Amelia", "version": "1.8.2", "sha256": "0gpw6aki06ji6yszp7n9mfy8zbxvdwv1xwjlx11aj2x2ghj4mcjg", - "depends": ["foreign", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "foreign", "rlang"] }, "AmesHousing": { "name": "AmesHousing", @@ -1127,25 +1145,25 @@ "name": "AnaCoDa", "version": "0.1.4.4", "sha256": "1b03bxysvw9v4j3bzsmrjf5ci06v6s83ix89qxy73ba5akf2gb7h", - "depends": ["mvtnorm", "Rcpp", "VGAM"] + "depends": ["Rcpp", "VGAM", "mvtnorm"] }, "Anaconda": { "name": "Anaconda", "version": "0.1.5", "sha256": "02ars06pmg0f0biy022yz2xf0sdmww9ff9zcpl74gah3sickq9ci", - "depends": ["ape", "data_table", "DESeq2", "ggplot2", "ggrepel", "lookup", "pheatmap", "plyr", "rafalib", "RColorBrewer"] + "depends": ["DESeq2", "RColorBrewer", "ape", "data_table", "ggplot2", "ggrepel", "lookup", "pheatmap", "plyr", "rafalib"] }, "AnalysisLin": { "name": "AnalysisLin", "version": "0.1.2", "sha256": "1mf77l74lfjlr856w48spjnn7pvjf9zygy1xcaj3fmi335h77j2x", - "depends": ["caret", "DT", "ggplot2", "Hmisc", "htmltools", "magrittr", "plotly", "RANN"] + "depends": ["DT", "Hmisc", "RANN", "caret", "ggplot2", "htmltools", "magrittr", "plotly"] }, "AnanseSeurat": { "name": "AnanseSeurat", "version": "1.2.0", "sha256": "12r6bxh0cvh94nb91lzdj7sa7na1ljc5gdmdfx6dwilhpdafn0a3", - "depends": ["dplyr", "ggplot2", "ggpubr", "magrittr", "patchwork", "png", "purrr", "rlang", "Seurat", "stringr"] + "depends": ["Seurat", "dplyr", "ggplot2", "ggpubr", "magrittr", "patchwork", "png", "purrr", "rlang", "stringr"] }, "AncestryMapper": { "name": "AncestryMapper", @@ -1163,7 +1181,7 @@ "name": "Andromeda", "version": "0.6.6", "sha256": "0k7w9jk9aw6pays5lg1spzac5kpka0i9vc2v5sxn2r4shbxr9yf9", - "depends": ["cli", "DBI", "dbplyr", "dplyr", "hms", "pillar", "rlang", "RSQLite", "tidyselect", "zip"] + "depends": ["DBI", "RSQLite", "cli", "dbplyr", "dplyr", "hms", "pillar", "rlang", "tidyselect", "zip"] }, "AnglerCreelSurveySimulation": { "name": "AnglerCreelSurveySimulation", @@ -1181,7 +1199,7 @@ "name": "AnnoProbe", "version": "0.1.7", "sha256": "0715bpifj8r4ji0m89wk4x7vd3pwx8kqy9vs8m0ivmq7bb56nx0b", - "depends": ["Biobase", "curl", "DT", "ggplot2", "ggpubr", "httr", "pheatmap", "xml2"] + "depends": ["Biobase", "DT", "curl", "ggplot2", "ggpubr", "httr", "pheatmap", "xml2"] }, "AnnotationBustR": { "name": "AnnotationBustR", @@ -1193,31 +1211,31 @@ "name": "AnnuityRIR", "version": "1.0-0", "sha256": "0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9", - "depends": ["actuar", "EnvStats", "fitdistrplus", "mc2d", "tseries"] + "depends": ["EnvStats", "actuar", "fitdistrplus", "mc2d", "tseries"] }, "AntAngioCOOL": { "name": "AntAngioCOOL", "version": "1.2", "sha256": "1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2", - "depends": ["caret", "rJava", "rpart", "RWeka"] + "depends": ["RWeka", "caret", "rJava", "rpart"] }, "AntMAN": { "name": "AntMAN", "version": "1.1.0", "sha256": "118jhjjfnp23kbkir66rdvlzsvms316zwr2r5msrjrb3nd8lz5va", - "depends": ["bayesplot", "GGally", "mcclust", "mvtnorm", "Rcpp", "RcppArmadillo", "Rdpack", "salso"] + "depends": ["GGally", "Rcpp", "RcppArmadillo", "Rdpack", "bayesplot", "mcclust", "mvtnorm", "salso"] }, "AnthropMMD": { "name": "AnthropMMD", "version": "4.0.3", "sha256": "03mvlw54a9xz7ggjbfi9yddzq1wv4skjvbv3r4bdrldpbd6scm0b", - "depends": ["dplyr", "MASS", "plotrix", "rlang", "scatterplot3d", "shiny", "smacof"] + "depends": ["MASS", "dplyr", "plotrix", "rlang", "scatterplot3d", "shiny", "smacof"] }, "Anthropometry": { "name": "Anthropometry", "version": "1.19", "sha256": "0aj70wm37bd5i4gzajvs6lf3zg0bz3kkf4srrcslg6drqk6n5z5l", - "depends": ["archetypes", "biclust", "cluster", "ddalpha", "FNN", "ICGE", "nnls", "rgl", "shapes"] + "depends": ["FNN", "ICGE", "archetypes", "biclust", "cluster", "ddalpha", "nnls", "rgl", "shapes"] }, "AntibodyTiters": { "name": "AntibodyTiters", @@ -1235,13 +1253,13 @@ "name": "Aoptbdtvc", "version": "0.0.3", "sha256": "19prbak6ssmzqaa88mw0h0bdsj8s6hvcsgrmlgq4h6iyp959yj73", - "depends": ["lpSolve", "MASS"] + "depends": ["MASS", "lpSolve"] }, "AovBay": { "name": "AovBay", "version": "0.1.0", "sha256": "110y9wbqr0m9b6wr1c5mncrdjpg247308989bswkqnim2msvnzcf", - "depends": ["BayesFactor", "BH", "broom", "car", "dplyr", "DT", "highcharter", "htmltools", "moments", "nortest", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "reshape", "rstan", "rstantools", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "StanHeaders", "stringr", "tibble", "waiter"] + "depends": ["BH", "BayesFactor", "DT", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "broom", "car", "dplyr", "highcharter", "htmltools", "moments", "nortest", "purrr", "reshape", "rstan", "rstantools", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "stringr", "tibble", "waiter"] }, "ApacheLogProcessor": { "name": "ApacheLogProcessor", @@ -1251,21 +1269,21 @@ }, "Apoderoides": { "name": "Apoderoides", - "version": "2.0.0", - "sha256": "0rgba2855gnavq4c8ik6vq0fh4m9wqyp0wgxjw7rdw1jsvi7dyqs", - "depends": ["ape", "Rcpp", "RcppProgress"] + "version": "3.0.0", + "sha256": "1hlcps0zf9ymcrfac7jhrnqzd0qihxfw363qj8zmjj3q6aa3v2k9", + "depends": ["Rcpp", "RcppProgress", "ape"] }, "Apollonius": { "name": "Apollonius", "version": "1.0.1", "sha256": "13iz0j2kc3jzzn77jawrm0fg23mqkxh7h7dasfjibmykamvw45nb", - "depends": ["abind", "BH", "colorsGen", "gyro", "plotrix", "Polychrome", "Rcpp", "RcppCGAL", "RcppEigen"] + "depends": ["BH", "Polychrome", "Rcpp", "RcppCGAL", "RcppEigen", "abind", "colorsGen", "gyro", "plotrix"] }, "AppliedPredictiveModeling": { "name": "AppliedPredictiveModeling", "version": "1.1-7", "sha256": "1wi0sw5w1c51rmh9z98wdpk5rgzsylkkb6g019djiwxvj92l99hh", - "depends": ["CORElearn", "ellipse", "lattice", "MASS", "plyr", "reshape2"] + "depends": ["CORElearn", "MASS", "ellipse", "lattice", "plyr", "reshape2"] }, "AquaBEHER": { "name": "AquaBEHER", @@ -1283,7 +1301,7 @@ "name": "AquaticLifeHistory", "version": "1.0.5", "sha256": "0h6q0ajw2k2f1p0k8j6772p7i78a13amwxzj4ffrykqgwi3pr22v", - "depends": ["broom", "dplyr", "ggplot2", "magrittr", "MASS", "minpack_lm", "MuMIn", "plyr", "readr", "rlist", "tidyr"] + "depends": ["MASS", "MuMIn", "broom", "dplyr", "ggplot2", "magrittr", "minpack_lm", "plyr", "readr", "rlist", "tidyr"] }, "ArArRedux": { "name": "ArArRedux", @@ -1295,7 +1313,7 @@ "name": "ArCo", "version": "0.3-1", "sha256": "1afjdmcalx3m19jlvqs83fg5qlds59l5zzg3pzk13qk31r0hz7mk", - "depends": ["boot", "glmnet", "Matrix"] + "depends": ["Matrix", "boot", "glmnet"] }, "ArDec": { "name": "ArDec", @@ -1319,13 +1337,13 @@ "name": "AriGaMyANNSVR", "version": "0.1.0", "sha256": "1faqripvb6alfajz37zqm70p0c2f6yf9f2ca2bzrsizp0yh81719", - "depends": ["AllMetrics", "aTSA", "DescribeDF", "dplyr", "e1071", "fGarch", "FinTS", "forecast", "neuralnet", "psych", "tseries"] + "depends": ["AllMetrics", "DescribeDF", "FinTS", "aTSA", "dplyr", "e1071", "fGarch", "forecast", "neuralnet", "psych", "tseries"] }, "Arothron": { "name": "Arothron", "version": "2.0.5", "sha256": "0clz01096fdkhnh89np3knhdnk78p2faj9zkm5qhg56jzaji8wxi", - "depends": ["abind", "alphashape3d", "compositions", "doParallel", "foreach", "geometry", "Morpho", "rgl", "Rvcg", "stringr", "vegan"] + "depends": ["Morpho", "Rvcg", "abind", "alphashape3d", "compositions", "doParallel", "foreach", "geometry", "rgl", "stringr", "vegan"] }, "AsioHeaders": { "name": "AsioHeaders", @@ -1337,13 +1355,13 @@ "name": "AssetAllocation", "version": "1.1.1", "sha256": "0qd58478bwg20x7ivfasmhs87swl6wj98vzlp608y208madl8ss6", - "depends": ["curl", "NMOF", "PerformanceAnalytics", "quantmod", "riskParityPortfolio", "RiskPortfolios", "xts", "zoo"] + "depends": ["NMOF", "PerformanceAnalytics", "RiskPortfolios", "curl", "quantmod", "riskParityPortfolio", "xts", "zoo"] }, "AssetCorr": { "name": "AssetCorr", "version": "1.0.4", "sha256": "0r98li2lxhfap1hn6h0l78phpm9m1nlcqhwzpq0ahhw0b1rd4qkf", - "depends": ["boot", "ggplot2", "knitr", "mvQuad", "mvtnorm", "numDeriv", "qpdf", "Rdpack", "VineCopula"] + "depends": ["Rdpack", "VineCopula", "boot", "ggplot2", "knitr", "mvQuad", "mvtnorm", "numDeriv", "qpdf"] }, "AssetPricing": { "name": "AssetPricing", @@ -1359,8 +1377,8 @@ }, "AssocBin": { "name": "AssocBin", - "version": "0.1-0", - "sha256": "0d5jd96mipwgfnc1qys61hly8bk8l8a0xhi4x677zm2sd9gkp6ic", + "version": "1.0-0", + "sha256": "16pl18b2jd45ys2cc4h74k2llc5daw8b727nmby4qdrja3qnifbr", "depends": [] }, "AssocTests": { @@ -1409,7 +1427,7 @@ "name": "AtmChile", "version": "1.0.1", "sha256": "0r8js8racs93vxbq62b44qj9m1vsp24dv81bmsg0a3smpk67zd46", - "depends": ["data_table", "DT", "lubridate", "openair", "plotly", "shiny", "shinycssloaders"] + "depends": ["DT", "data_table", "lubridate", "openair", "plotly", "shiny", "shinycssloaders"] }, "AurieLSHGaussian": { "name": "AurieLSHGaussian", @@ -1439,7 +1457,7 @@ "name": "AutoPipe", "version": "0.1.6", "sha256": "0bzllh92fgsmz79lh6m2f10vsx5qng4l7bwbwkp2kzwnncy7cq63", - "depends": ["annotate", "cluster", "clusterProfiler", "ConsensusClusterPlus", "fgsea", "msigdbr", "org_Hs_eg_db", "pamr", "RColorBrewer", "Rtsne", "siggenes"] + "depends": ["ConsensusClusterPlus", "RColorBrewer", "Rtsne", "annotate", "cluster", "clusterProfiler", "fgsea", "msigdbr", "org_Hs_eg_db", "pamr", "siggenes"] }, "AutoPlots": { "name": "AutoPlots", @@ -1451,7 +1469,7 @@ "name": "AutoScore", "version": "1.0.0", "sha256": "14wn566xm308zir12rckwc5fagm2x1mrphy0a7iri0cbrffgnkz4", - "depends": ["car", "coxed", "dplyr", "ggplot2", "Hmisc", "knitr", "magrittr", "ordinal", "plotly", "pROC", "randomForest", "randomForestSRC", "rlang", "survAUC", "survival", "survminer", "tableone", "tidyr"] + "depends": ["Hmisc", "car", "coxed", "dplyr", "ggplot2", "knitr", "magrittr", "ordinal", "pROC", "plotly", "randomForest", "randomForestSRC", "rlang", "survAUC", "survival", "survminer", "tableone", "tidyr"] }, "AutoStepwiseGLM": { "name": "AutoStepwiseGLM", @@ -1463,19 +1481,19 @@ "name": "AutoTransQF", "version": "0.1.3", "sha256": "1kqdzz719r2bp37b6fn21njgbiyn7rrpms7jcjl8i0znwxkspd82", - "depends": ["matlab2r", "moments", "VGAM"] + "depends": ["VGAM", "matlab2r", "moments"] }, "AutoWeatherIndices": { "name": "AutoWeatherIndices", "version": "0.1.0", "sha256": "08f2c026vn5kmsdlf54sxakzjp2f43dkrs6mv9qwnjfrd2hchzzi", - "depends": ["gtools", "Hmisc"] + "depends": ["Hmisc", "gtools"] }, "Autoplotprotein": { "name": "Autoplotprotein", "version": "1.1", "sha256": "13mxqmhhdiq7mz4m6nx39dsq7x3bm8fsgskswx48vsq6x2k6byxa", - "depends": ["ade4", "plotrix", "plyr", "seqinr", "XML"] + "depends": ["XML", "ade4", "plotrix", "plyr", "seqinr"] }, "AutoregressionMDE": { "name": "AutoregressionMDE", @@ -1505,7 +1523,7 @@ "name": "AzureAuth", "version": "1.3.3", "sha256": "1arr7vbcj9ibrx826md487hcmlch46b2h3r03a14wxq6ssxj4x0z", - "depends": ["httr", "jose", "jsonlite", "openssl", "R6", "rappdirs"] + "depends": ["R6", "httr", "jose", "jsonlite", "openssl", "rappdirs"] }, "AzureCognitive": { "name": "AzureCognitive", @@ -1517,7 +1535,7 @@ "name": "AzureContainers", "version": "1.3.2", "sha256": "0lykvf4kk1q7b7ln4l8jlrxgqyvrg1cfnap4ak8zkhxmrgzqpc5f", - "depends": ["AzureGraph", "AzureRMR", "httr", "openssl", "processx", "R6"] + "depends": ["AzureGraph", "AzureRMR", "R6", "httr", "openssl", "processx"] }, "AzureCosmosR": { "name": "AzureCosmosR", @@ -1529,19 +1547,19 @@ "name": "AzureGraph", "version": "1.3.4", "sha256": "0x7ya1yxk0cga9cfbfkd332l2syswdqjamzr2xqvb6ybwc5lpcy2", - "depends": ["AzureAuth", "curl", "httr", "jsonlite", "openssl", "R6"] + "depends": ["AzureAuth", "R6", "curl", "httr", "jsonlite", "openssl"] }, "AzureKeyVault": { "name": "AzureKeyVault", "version": "1.0.5", "sha256": "15x0mkgn7pq2yk05l5vwvd744gxkz28nb5azc1yz502ayr1s6hnm", - "depends": ["AzureAuth", "AzureGraph", "AzureRMR", "httr", "jose", "jsonlite", "openssl", "R6"] + "depends": ["AzureAuth", "AzureGraph", "AzureRMR", "R6", "httr", "jose", "jsonlite", "openssl"] }, "AzureKusto": { "name": "AzureKusto", "version": "1.1.3", "sha256": "0n0bkaj9gsg2xcczpbg8nm62ipgh4s6a8lvnaiylh8q3w1z6aqfl", - "depends": ["AzureAuth", "AzureRMR", "DBI", "dplyr", "httr", "jsonlite", "openssl", "R6", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["AzureAuth", "AzureRMR", "DBI", "R6", "dplyr", "httr", "jsonlite", "openssl", "rlang", "tibble", "tidyr", "tidyselect"] }, "AzureQstor": { "name": "AzureQstor", @@ -1553,13 +1571,13 @@ "name": "AzureRMR", "version": "2.4.4", "sha256": "09mjc5ibk1g1azskqnrcgfb5bi88aw55g96cyas5vlwgi54xzs70", - "depends": ["AzureAuth", "AzureGraph", "httr", "jsonlite", "R6", "uuid"] + "depends": ["AzureAuth", "AzureGraph", "R6", "httr", "jsonlite", "uuid"] }, "AzureStor": { "name": "AzureStor", "version": "3.7.0", "sha256": "0jrc4m8p0hss07hna157z510rh84lhjmyqsa47wirpr0b5ba6kr3", - "depends": ["AzureRMR", "httr", "mime", "openssl", "R6", "vctrs", "xml2"] + "depends": ["AzureRMR", "R6", "httr", "mime", "openssl", "vctrs", "xml2"] }, "AzureTableStor": { "name": "AzureTableStor", @@ -1571,7 +1589,7 @@ "name": "AzureVM", "version": "2.2.2", "sha256": "0766a4y17qgq3vgb398n6zn8sdjrv65gpvrnr9b9g89zdsdy9fc4", - "depends": ["AzureRMR", "jsonlite", "R6"] + "depends": ["AzureRMR", "R6", "jsonlite"] }, "AzureVMmetadata": { "name": "AzureVMmetadata", @@ -1613,25 +1631,25 @@ "name": "BALLI", "version": "0.2.0", "sha256": "0qmjwpj56n07dvjwfknqvc02f0y5mlwh2yz4lrw7c4wqgrckcpgi", - "depends": ["edgeR", "limma", "MASS"] + "depends": ["MASS", "edgeR", "limma"] }, "BAMBI": { "name": "BAMBI", "version": "2.3.5", "sha256": "16pb04n30y8sl6m6qgrdxk7sck98233cravpbzw4fzl2j8h0mm3r", - "depends": ["bridgesampling", "coda", "future_apply", "gtools", "label_switching", "lattice", "loo", "mvtnorm", "numDeriv", "qrng", "RColorBrewer", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "bridgesampling", "coda", "future_apply", "gtools", "label_switching", "lattice", "loo", "mvtnorm", "numDeriv", "qrng", "scales"] }, "BAMMtools": { "name": "BAMMtools", "version": "2.1.11", "sha256": "0ymb1vwrzwg7gs4n3zjikg10ajk75r18j5rlgs25n4ab4fp6sibp", - "depends": ["ape", "gplots", "Rcpp"] + "depends": ["Rcpp", "ape", "gplots"] }, "BANAM": { "name": "BANAM", - "version": "0.2.0", - "sha256": "0k04d8ssfg078w52paj323bflzlbk5k0r17c4xl1xs2g6saa0iyn", - "depends": ["bain", "BFpack", "extraDistr", "Matrix", "matrixcalc", "mvtnorm", "psych", "rARPACK", "sna", "tmvtnorm"] + "version": "0.2.1", + "sha256": "0jiw42icj0zzxpf51fxjbgqzjlp5s90nd8pgav4nlq70h4y64g2n", + "depends": ["BFpack", "Matrix", "bain", "extraDistr", "matrixcalc", "mvtnorm", "psych", "rARPACK", "sna", "tmvtnorm"] }, "BANOVA": { "name": "BANOVA", @@ -1647,9 +1665,9 @@ }, "BART": { "name": "BART", - "version": "2.9.7", - "sha256": "15nm6ahi5kq2fd9zrksqq7ybmlzrw7hds5ws27zvlayyy2qxyq17", - "depends": ["nlme", "nnet", "Rcpp", "survival"] + "version": "2.9.9", + "sha256": "1jm17n2p6n0knbjzy3sqxaljbq9qfm7mn1swb6zpgw172hr7l22v", + "depends": ["Rcpp", "nlme", "survival"] }, "BAS": { "name": "BAS", @@ -1667,7 +1685,7 @@ "name": "BASiNET", "version": "0.0.5", "sha256": "09g2h38kz1g9kkjc69si5d6z6fkayys9hinjs3p6dn7sx7zn2bx1", - "depends": ["Biostrings", "igraph", "randomForest", "rJava", "rmcfs", "RWeka"] + "depends": ["Biostrings", "RWeka", "igraph", "rJava", "randomForest", "rmcfs"] }, "BASiNETEntropy": { "name": "BASiNETEntropy", @@ -1679,7 +1697,13 @@ "name": "BAT", "version": "2.9.6", "sha256": "04wsr8sz70z7z6cqhmc4npqvh6ay9r1x5ghkp2ick58s0f6sagbf", - "depends": ["ape", "geometry", "hypervolume", "MASS", "nls2", "phytools", "terra", "vegan"] + "depends": ["MASS", "ape", "geometry", "hypervolume", "nls2", "phytools", "terra", "vegan"] + }, + "BATSS": { + "name": "BATSS", + "version": "0.7.14", + "sha256": "1252hxqdplbk12m6ri9fh4p4zy8q561n8ix6m2qy404idggklnxc", + "depends": ["R_utils", "abind", "cli", "plyr", "rlang"] }, "BAYSTAR": { "name": "BAYSTAR", @@ -1703,7 +1727,7 @@ "name": "BBEST", "version": "0.1-8", "sha256": "0j3ykxsmxima75h40mhqm32l2ffc27pk11rfzjyvv1cm6q2q3gbh", - "depends": ["aws", "DEoptim", "ggplot2", "reshape2", "shiny"] + "depends": ["DEoptim", "aws", "ggplot2", "reshape2", "shiny"] }, "BBI": { "name": "BBI", @@ -1715,7 +1739,7 @@ "name": "BBSSL", "version": "0.1.0", "sha256": "0vb3afbx8p3frliy92sf2wlmx32rasxj39i8d023m2dvsblbh50x", - "depends": ["glmnet", "greybox", "Matrix", "mvnfast", "rmutil", "statmod", "svMisc", "truncnorm"] + "depends": ["Matrix", "glmnet", "greybox", "mvnfast", "rmutil", "statmod", "svMisc", "truncnorm"] }, "BBmisc": { "name": "BBmisc", @@ -1727,7 +1751,7 @@ "name": "BCA1SG", "version": "0.1.0", "sha256": "14jvi5gn19f72szcnyhfpdld00cc7gyih5qrm4bpzvp553f1svvk", - "depends": ["logOfGamma", "Matrix"] + "depends": ["Matrix", "logOfGamma"] }, "BCBCSF": { "name": "BCBCSF", @@ -1743,15 +1767,15 @@ }, "BCClong": { "name": "BCClong", - "version": "1.0.2", - "sha256": "06i77iz6i79dbwnjic7x7dgysbh4x22ixhzlpkmpb47yx7c2qmvf", - "depends": ["abind", "cluster", "coda", "ggplot2", "label_switching", "LaplacesDemon", "lme4", "MASS", "mclust", "MCMCpack", "mixAK", "mvtnorm", "nnet", "Rcpp", "RcppArmadillo", "Rmpfr", "truncdist"] + "version": "1.0.3", + "sha256": "1ighfc6zsgclvpfan0vdi0k896y4lnwkvm9g3fj1zmmzf2pym3mj", + "depends": ["LaplacesDemon", "MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "Rmpfr", "abind", "cluster", "coda", "ggplot2", "gridExtra", "label_switching", "lme4", "mclust", "mixAK", "mvtnorm", "nnet", "truncdist"] }, "BCDAG": { "name": "BCDAG", "version": "1.1.1", "sha256": "1w6b72vcv9gdwxm5ynpy9jrw2qpbfi4qn8272qdbv4jz1p3k605n", - "depends": ["graph", "gRbase", "lattice", "mvtnorm", "Rgraphviz"] + "depends": ["Rgraphviz", "gRbase", "graph", "lattice", "mvtnorm"] }, "BCDating": { "name": "BCDating", @@ -1763,13 +1787,13 @@ "name": "BCEA", "version": "2.4.6", "sha256": "0qmnwh3j0mksgvnfnbkym7fpcngdnf1j83lqfilp5gn46akdqyvn", - "depends": ["cli", "dplyr", "ggplot2", "gridExtra", "MASS", "Matrix", "MCMCvis", "purrr", "Rdpack", "reshape2", "rlang", "rstan", "scales"] + "depends": ["MASS", "MCMCvis", "Matrix", "Rdpack", "cli", "dplyr", "ggplot2", "gridExtra", "purrr", "reshape2", "rlang", "rstan", "scales"] }, "BCEE": { "name": "BCEE", "version": "1.3.2", "sha256": "181khl93rsrqjm8cmn14a6bb7s47dp3xc31gm9rk088ixfjadq7h", - "depends": ["BMA", "boot", "leaps", "Rcpp", "RcppArmadillo"] + "depends": ["BMA", "Rcpp", "RcppArmadillo", "boot", "leaps"] }, "BCHM": { "name": "BCHM", @@ -1787,13 +1811,13 @@ "name": "BCSub", "version": "0.5", "sha256": "0c8dlxsx23qfyygmajg2amj78ax01kb3808d9hvy7g3hkgp2i2fp", - "depends": ["MASS", "mcclust", "nFactors", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "mcclust", "nFactors"] }, "BCT": { "name": "BCT", "version": "1.2", "sha256": "0fs6wh59njgj7ybnkf5ki4g8phmzrchvml0f8jyhhxdarkj5vr5d", - "depends": ["igraph", "Rcpp", "stringr"] + "depends": ["Rcpp", "igraph", "stringr"] }, "BCgee": { "name": "BCgee", @@ -1805,7 +1829,7 @@ "name": "BClustLonG", "version": "0.1.3", "sha256": "1p6fm60vhs9l3b120h2l7nz4rf4ckhka7124kzwjd7znax2a336g", - "depends": ["lme4", "MASS", "mcclust", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "lme4", "mcclust"] }, "BDAlgo": { "name": "BDAlgo", @@ -1829,7 +1853,7 @@ "name": "BDWreg", "version": "1.3.0", "sha256": "0di2ll2sjj6js9fg3gx20kmjjzkqwhwq9g319jfwzzwxbclqs5ky", - "depends": ["coda", "doParallel", "DWreg", "foreach", "MASS"] + "depends": ["DWreg", "MASS", "coda", "doParallel", "foreach"] }, "BDgraph": { "name": "BDgraph", @@ -1847,19 +1871,25 @@ "name": "BEACH", "version": "1.3.1", "sha256": "0biq6c74k8vb8ykafzf3blyi08rp65x1vaw3bfpwdc1ihc9wrgjr", - "depends": ["devtools", "DT", "haven", "plyr", "rJava", "rtf", "sas7bdat", "shiny", "WriteXLS", "xtable"] + "depends": ["DT", "WriteXLS", "devtools", "haven", "plyr", "rJava", "rtf", "sas7bdat", "shiny", "xtable"] + }, + "BEAMR": { + "name": "BEAMR", + "version": "1.1.0", + "sha256": "0187ka2lgkkqbvkrss4sgfnihicvkyi9zp6dk79cfxjvl3jyh2xm", + "depends": ["MASS", "dplyr", "ggmosaic", "ggplot2", "ggpubr", "logistf", "magrittr", "purrr", "rlist", "stringr", "survival", "survminer"] }, "BED": { "name": "BED", "version": "1.5.2", "sha256": "0js227vn6mvn7zk2q0vw9w9cp2ayjzqja6mrmpw9wnx82fp0amcg", - "depends": ["dplyr", "DT", "miniUI", "neo2R", "readr", "rstudioapi", "shiny", "stringr", "visNetwork"] + "depends": ["DT", "dplyr", "miniUI", "neo2R", "readr", "rstudioapi", "shiny", "stringr", "visNetwork"] }, "BEDASSLE": { "name": "BEDASSLE", "version": "1.6.1", "sha256": "1zjgcfpsvghxz62qsg4s1w6gwpd804s8hfnwy5hifg6sy4phw9d7", - "depends": ["emdbook", "MASS", "matrixcalc"] + "depends": ["MASS", "emdbook", "matrixcalc"] }, "BEDMatrix": { "name": "BEDMatrix", @@ -1871,7 +1901,7 @@ "name": "BEKKs", "version": "1.4.4", "sha256": "1ai475d1ya8j8kl4w6qdpdmsarz74p1799fc9hl0if2r3gv211vn", - "depends": ["future", "future_apply", "GAS", "ggfortify", "ggplot2", "gridExtra", "ks", "lubridate", "mathjaxr", "moments", "numDeriv", "pbapply", "Rcpp", "RcppArmadillo", "reshape2", "xts"] + "depends": ["GAS", "Rcpp", "RcppArmadillo", "future", "future_apply", "ggfortify", "ggplot2", "gridExtra", "ks", "lubridate", "mathjaxr", "moments", "numDeriv", "pbapply", "reshape2", "xts"] }, "BEND": { "name": "BEND", @@ -1901,7 +1931,7 @@ "name": "BETS", "version": "0.4.9", "sha256": "0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm", - "depends": ["DBI", "digest", "dplyr", "DT", "dygraphs", "forecast", "foreign", "ggplot2", "grnn", "htmltools", "httr", "lubridate", "miniUI", "plotly", "rjson", "rmarkdown", "RMySQL", "rstudioapi", "rvest", "seasonal", "shiny", "sqldf", "stringr", "urca", "webshot", "xml2", "zoo"] + "depends": ["DBI", "DT", "RMySQL", "digest", "dplyr", "dygraphs", "forecast", "foreign", "ggplot2", "grnn", "htmltools", "httr", "lubridate", "miniUI", "plotly", "rjson", "rmarkdown", "rstudioapi", "rvest", "seasonal", "shiny", "sqldf", "stringr", "urca", "webshot", "xml2", "zoo"] }, "BElikelihood": { "name": "BElikelihood", @@ -1911,15 +1941,15 @@ }, "BFF": { "name": "BFF", - "version": "3.0.1", - "sha256": "1sya6ww8jwi56zb3i2rjhk1qd52n5s9sqlzndyk812zyxj6h5zim", - "depends": ["BSDA", "ggplot2", "gsl", "hypergeo", "Matrix"] + "version": "4.2.1", + "sha256": "1s4f9mjhx24hxm2aan25kmb5akpxl25ggic3mkwmh1d0npbgip6a", + "depends": ["Matrix", "ggplot2", "gsl", "rlang"] }, "BFI": { "name": "BFI", - "version": "1.1.4", - "sha256": "10xy9acjvq1c21wsb3lfhpza56zcb4ifb4i4330i02phxxc8a9fa", - "depends": ["devtools"] + "version": "2.0.1", + "sha256": "0szx9cjzhlxk6n83i6rm48db2lkj4zdsaqrgzipr71bwwjfk08nr", + "depends": [] }, "BFS": { "name": "BFS", @@ -1929,15 +1959,15 @@ }, "BFpack": { "name": "BFpack", - "version": "1.2.3", - "sha256": "1bji697998qkb56gid8jd6bp9gqwxkls73d8vk55z838r60irlla", - "depends": ["bain", "Bergm", "ergm", "extraDistr", "lme4", "MASS", "mvtnorm", "pracma", "QRM", "sandwich"] + "version": "1.3.0", + "sha256": "1ddcqcd8wzc1mc8d27kwv1xand8f4asvdirjbgncl5vs4akr924m", + "depends": ["Bergm", "MASS", "QRM", "bain", "ergm", "extraDistr", "lme4", "mvtnorm", "pracma", "sandwich"] }, "BGData": { "name": "BGData", "version": "2.4.1", "sha256": "1bx63spfmsn9hz3qxhkvipfvyqcdy4afqzcada3bgly265kdg10h", - "depends": ["BEDMatrix", "bigmemory", "bit", "crochet", "ff", "LinkedMatrix", "symDMatrix", "synchronicity"] + "depends": ["BEDMatrix", "LinkedMatrix", "bigmemory", "bit", "crochet", "ff", "symDMatrix", "synchronicity"] }, "BGFD": { "name": "BGFD", @@ -1953,9 +1983,9 @@ }, "BGGM": { "name": "BGGM", - "version": "2.1.1", - "sha256": "1k83x9x48vls5ahvl4fm3salss4vf27z23iiylkj7fcrf4br6q27", - "depends": ["BFpack", "GGally", "ggplot2", "ggridges", "MASS", "mvnfast", "network", "Rcpp", "RcppArmadillo", "RcppDist", "RcppProgress", "Rdpack", "reshape", "sna"] + "version": "2.1.3", + "sha256": "15yqbifnxlpwk25ki1yxfylkyb061375cxwq7dbid2381lvnslih", + "depends": ["BFpack", "GGally", "MASS", "Rcpp", "RcppArmadillo", "RcppDist", "RcppProgress", "Rdpack", "ggplot2", "ggridges", "mvnfast", "network", "reshape", "sna"] }, "BGLR": { "name": "BGLR", @@ -1971,15 +2001,15 @@ }, "BGVAR": { "name": "BGVAR", - "version": "2.5.5", - "sha256": "10cj8lx63jdzmvw674zj4vawvf3mwvyjxjpqicy9ajm6r6gbccj8", - "depends": ["abind", "bayesm", "coda", "GIGrvg", "knitr", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppProgress", "readxl", "stochvol", "xts", "zoo"] + "version": "2.5.7", + "sha256": "1djccjwknghq33kzdyisfk0gxcqd54fmwad59kadgp39fah9hz9k", + "depends": ["GIGrvg", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppProgress", "abind", "bayesm", "coda", "knitr", "readxl", "stochvol", "xts", "zoo"] }, "BGmisc": { "name": "BGmisc", - "version": "1.3.1", - "sha256": "01ka6rc5wivv4m44igfv9fm42pc1f8c6gxxwvabaz1p5hs725yx8", - "depends": ["data_table", "igraph", "kinship2", "Matrix", "stringr"] + "version": "1.3.2", + "sha256": "12m6c0b0nqgxiiy9vynygx186vb1v5i6s8gfjijsqn7wzpzfj6ig", + "depends": ["Matrix", "data_table", "igraph", "kinship2", "stringr"] }, "BH": { "name": "BH", @@ -2003,7 +2033,7 @@ "name": "BHMSMAfMRI", "version": "2.2", "sha256": "0xn4ss422mkshx5kcznaym04i5z5a9vw9hvcb10r38vq031wys8q", - "depends": ["oro_nifti", "Rcpp", "RcppArmadillo", "wavethresh"] + "depends": ["Rcpp", "RcppArmadillo", "oro_nifti", "wavethresh"] }, "BHSBVAR": { "name": "BHSBVAR", @@ -2027,25 +2057,25 @@ "name": "BIEN", "version": "1.2.6", "sha256": "17zrj5ckxaz4mdbgywxi8kf51ssbf2md1d2azf30dh96kzc2ayps", - "depends": ["ape", "DBI", "doParallel", "fasterize", "foreach", "raster", "RPostgreSQL", "sf", "terra"] + "depends": ["DBI", "RPostgreSQL", "ape", "doParallel", "fasterize", "foreach", "raster", "sf", "terra"] }, "BIFIEsurvey": { "name": "BIFIEsurvey", "version": "3.6-6", "sha256": "0g0v7sahh7kg84yi0gj7q21i2wld76vs8c0vzynyna3jal5a2ij7", - "depends": ["miceadds", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "miceadds"] }, "BIGDAWG": { "name": "BIGDAWG", "version": "3.0.3", "sha256": "1zbikvhyaksbddv2kz8nqkidjy4qsfp6a8wwyxjy5a0wcnqnwsxf", - "depends": ["haplo_stats", "httr", "XML"] + "depends": ["XML", "haplo_stats", "httr"] }, "BIGL": { "name": "BIGL", - "version": "1.9.1", - "sha256": "0cc67fg6b5vjjvq485bw374h1d0l7klcgprwpb472srsbdx6l4y2", - "depends": ["data_table", "ggplot2", "lifecycle", "MASS", "minpack_lm", "nleqslv", "numDeriv", "plotly", "progress", "robustbase", "scales"] + "version": "1.9.3", + "sha256": "17skfw03f6ycfkqinisd9mrslwj19g5mm99s4ma65kln3xlx692j", + "depends": ["MASS", "data_table", "ggplot2", "htmlwidgets", "lifecycle", "magrittr", "minpack_lm", "nleqslv", "numDeriv", "plotly", "progress", "robustbase", "scales"] }, "BINCOR": { "name": "BINCOR", @@ -2057,7 +2087,7 @@ "name": "BINtools", "version": "0.2.0", "sha256": "0x97h0b2krdgrd0x266fidj77an3dq8mf9lnbas9112p4mhkmk58", - "depends": ["BH", "combinat", "dplyr", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "stringi", "tibble"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "combinat", "dplyr", "mvtnorm", "rstan", "rstantools", "stringi", "tibble"] }, "BIOMASS": { "name": "BIOMASS", @@ -2079,21 +2109,21 @@ }, "BKTR": { "name": "BKTR", - "version": "0.1.1", - "sha256": "07qq6jxrwyvid6j54vzvf7a28ryk478kscn3z7dk9ic2y9c5ljj0", - "depends": ["data_table", "ggmap", "ggplot2", "R6", "R6P", "torch"] + "version": "0.2.0", + "sha256": "17nibqn0bwbzdrxqyq10m7ll958cp5v431zda3ja16az2mss38cy", + "depends": ["R6", "R6P", "data_table", "ggmap", "ggplot2", "torch"] }, "BLA": { "name": "BLA", "version": "1.0.1", "sha256": "06nfsn67vgmkm0rrbs2q56gswx4hj7swysaq6vizx6zsl0xp7rvr", - "depends": ["data_table", "MASS", "mvtnorm", "numDeriv"] + "depends": ["MASS", "data_table", "mvtnorm", "numDeriv"] }, "BLCOP": { "name": "BLCOP", "version": "0.3.3", "sha256": "08y9vmx3cknjvk6ngfwxlfnc03cqpj97i1ijrs1cw5sahjc0vmhc", - "depends": ["fBasics", "fMultivar", "fPortfolio", "knitr", "MASS", "quadprog", "rmarkdown", "RUnit", "timeSeries"] + "depends": ["MASS", "RUnit", "fBasics", "fMultivar", "fPortfolio", "knitr", "quadprog", "rmarkdown", "timeSeries"] }, "BLModel": { "name": "BLModel", @@ -2111,7 +2141,7 @@ "name": "BLPestimatoR", "version": "0.3.4", "sha256": "07q5ifsvw1ccxys6y01ldh2n9v7chyv88rda1jbznb3nnwka2wh0", - "depends": ["Formula", "Matrix", "mvQuad", "numDeriv", "randtoolbox", "Rcpp", "RcppArmadillo"] + "depends": ["Formula", "Matrix", "Rcpp", "RcppArmadillo", "mvQuad", "numDeriv", "randtoolbox"] }, "BLR": { "name": "BLR", @@ -2165,7 +2195,7 @@ "name": "BMRMM", "version": "1.0.1", "sha256": "1hkk1wwxl4hn9nj43akx6d01pivg3cmkbdngip5f7g2qxd483111", - "depends": ["fields", "logOfGamma", "MCMCpack", "multicool", "pracma"] + "depends": ["MCMCpack", "fields", "logOfGamma", "multicool", "pracma"] }, "BMS": { "name": "BMS", @@ -2183,7 +2213,7 @@ "name": "BMTAR", "version": "0.1.1", "sha256": "0c70vkgv2sdci33yrk2n297k105wnlxj1qchskdparkiipf47xsh", - "depends": ["Brobdingnag", "doParallel", "expm", "ggplot2", "ks", "MASS", "MCMCpack", "mvtnorm"] + "depends": ["Brobdingnag", "MASS", "MCMCpack", "doParallel", "expm", "ggplot2", "ks", "mvtnorm"] }, "BMconcor": { "name": "BMconcor", @@ -2195,7 +2225,7 @@ "name": "BMisc", "version": "1.4.6", "sha256": "1j1qxa5hgc9zdmk1y4xa87jcxi8m75hms88ishfvbqg8n2k9ah1h", - "depends": ["data_table", "dplyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "dplyr"] }, "BNPTSclust": { "name": "BNPTSclust", @@ -2213,19 +2243,19 @@ "name": "BNPmix", "version": "1.0.2", "sha256": "114gn80b7yyl6hi5cdnc0rp2hzy7pp8z6q4is1h29yxlqa6acbq4", - "depends": ["coda", "ggplot2", "ggpubr", "Rcpp", "RcppArmadillo", "RcppDist"] + "depends": ["Rcpp", "RcppArmadillo", "RcppDist", "coda", "ggplot2", "ggpubr"] }, "BNSL": { "name": "BNSL", "version": "0.1.4", "sha256": "0nrlx55364kgvkdpyaimgjxwnzmmdl1gmvyv3wkm8n2jyki92xxp", - "depends": ["bnlearn", "igraph", "Rcpp"] + "depends": ["Rcpp", "bnlearn", "igraph"] }, "BNSP": { "name": "BNSP", "version": "2.2.3", "sha256": "01rrqvgz9655psm7xcysf50y94lkzl2q3davgjzymg73kzbv3s41", - "depends": ["coda", "corrplot", "cubature", "Formula", "ggplot2", "gridExtra", "label_switching", "mgcv", "plot3D", "plyr", "threejs"] + "depends": ["Formula", "coda", "corrplot", "cubature", "ggplot2", "gridExtra", "label_switching", "mgcv", "plot3D", "plyr", "threejs"] }, "BNrich": { "name": "BNrich", @@ -2255,7 +2285,7 @@ "name": "BOSSreg", "version": "0.2.0", "sha256": "0ln4nx0jlvz5kqk9qkcl8a2cyhsdcqqfs5112qcaabjiwjnvla7w", - "depends": ["glmnet", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "glmnet"] }, "BPM": { "name": "BPM", @@ -2267,7 +2297,7 @@ "name": "BPrinStratTTE", "version": "0.0.7", "sha256": "1iqy36am0isiyjjgrf2jr1ywxxl0n33da637r7j3c3n3zc6yyqyg", - "depends": ["BH", "dplyr", "furrr", "magrittr", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "stringr", "tibble"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "furrr", "magrittr", "purrr", "rstan", "rstantools", "stringr", "tibble"] }, "BRACE": { "name": "BRACE", @@ -2283,9 +2313,9 @@ }, "BRBVS": { "name": "BRBVS", - "version": "0.1.1", - "sha256": "0ibbnfgna80xdb7lzmc0jvlkgw4xrgva1s4bnm0cq93412r2lnay", - "depends": ["copent", "ggplot2", "GJRM", "mvtnorm"] + "version": "0.2.1", + "sha256": "0vhwwsdbslr6craaflvllvba7s1b1jzhjqpmmh70f7k0qi61x5qc", + "depends": ["GJRM", "copent", "ggplot2", "mvtnorm"] }, "BRDT": { "name": "BRDT", @@ -2309,13 +2339,13 @@ "name": "BRINDA", "version": "0.1.5", "sha256": "0jxw3jxxp5k3q80pyiwlg4s5z5vbaplvf5bqb092hppgvkk2q2r5", - "depends": ["berryFunctions", "data_table", "dplyr", "Hmisc", "rlang"] + "depends": ["Hmisc", "berryFunctions", "data_table", "dplyr", "rlang"] }, "BRISC": { "name": "BRISC", "version": "1.0.5", "sha256": "06ppm03clgnsqj6r9qq6fmz609sbigz35iw1qp1lijc4yvwlpr49", - "depends": ["matrixStats", "pbapply", "RANN", "rdist"] + "depends": ["RANN", "matrixStats", "pbapply", "rdist"] }, "BRL": { "name": "BRL", @@ -2329,6 +2359,12 @@ "sha256": "0vkx0lbamfkmpcpd7kp85jqzf2fivp898yw0dvkgan8kkfqclra5", "depends": ["dplyr", "fBasics", "formattable", "goftest", "gsheet", "highcharter", "httr", "httr2", "lubridate", "magrittr", "nortest", "rlang", "rvest", "stringr", "tibble", "tidyr", "timeDate", "tseries", "xml2", "xts"] }, + "BRcal": { + "name": "BRcal", + "version": "0.0.4", + "sha256": "0i24bgmj3px40j86yqp9rdx1s2xjbxckfbr8qsclbkzh6xl73ra0", + "depends": ["fields", "ggplot2", "nloptr"] + }, "BRugs": { "name": "BRugs", "version": "0.9-2.1", @@ -2345,13 +2381,13 @@ "name": "BSGW", "version": "0.9.4", "sha256": "05gr0p9fmj5560s083iss8j4gyh5rk0kdi3qhq5dzr9mfzy0n12q", - "depends": ["doParallel", "foreach", "MfUSampler", "survival"] + "depends": ["MfUSampler", "doParallel", "foreach", "survival"] }, "BSL": { "name": "BSL", "version": "3.2.5", "sha256": "12fksih33a4r6dd8flv7s1hidazhfqcbyvvnppp25rn6jb7p6344", - "depends": ["coda", "copula", "doRNG", "foreach", "ggplot2", "glasso", "gridExtra", "MASS", "mvtnorm", "Rcpp", "RcppArmadillo", "Rdpack", "stringr", "whitening"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rdpack", "coda", "copula", "doRNG", "foreach", "ggplot2", "glasso", "gridExtra", "mvtnorm", "stringr", "whitening"] }, "BSPADATA": { "name": "BSPADATA", @@ -2363,25 +2399,25 @@ "name": "BSPBSS", "version": "1.0.5", "sha256": "0ax92x657f8jm731wc1qry19mbi4d3xxcxh5zd07w3705va4k82y", - "depends": ["BayesGPfit", "ggplot2", "glmnet", "gplots", "gridExtra", "gtools", "ica", "movMF", "neurobase", "oro_nifti", "Rcpp", "RcppArmadillo", "rstiefel", "svd"] + "depends": ["BayesGPfit", "Rcpp", "RcppArmadillo", "ggplot2", "glmnet", "gplots", "gridExtra", "gtools", "ica", "movMF", "neurobase", "oro_nifti", "rstiefel", "svd"] }, "BSS": { "name": "BSS", "version": "0.1.0", "sha256": "1lxmrdmr6c0niqz61kc9ybzszprn66jyinfy4dr9r6i161gvs4qg", - "depends": ["hypergeo", "MASS", "phangorn"] + "depends": ["MASS", "hypergeo", "phangorn"] }, "BSSasymp": { "name": "BSSasymp", "version": "1.2-3", "sha256": "1nqj8w8ilyhladjzhjp1rhi3ff7ik1m76pdhgs16ph7pzdw36w6i", - "depends": ["fICA", "JADE"] + "depends": ["JADE", "fICA"] }, "BSSoverSpace": { "name": "BSSoverSpace", "version": "0.1.0", "sha256": "117av0y5bw44z6293fvbxmf1xqhar7c4lf5z09xrs78dn1xdsnbs", - "depends": ["expm", "rSPDE", "SpatialBSS"] + "depends": ["SpatialBSS", "expm", "rSPDE"] }, "BSSprep": { "name": "BSSprep", @@ -2399,7 +2435,7 @@ "name": "BSagri", "version": "0.1-10", "sha256": "096l2ilr4x2fbjxchkksxkbiyaf7wwdmzn4xyjx001w873x9dgf6", - "depends": ["boot", "gamlss", "MCPAN", "mratios", "multcomp", "mvtnorm"] + "depends": ["MCPAN", "boot", "gamlss", "mratios", "multcomp", "mvtnorm"] }, "BT": { "name": "BT", @@ -2411,7 +2447,7 @@ "name": "BTLLasso", "version": "0.1-13", "sha256": "19r45qm1iq3sjb6r5ficgv8q9zwpbilxwrf6rxvqdl333xcnnjy4", - "depends": ["Matrix", "psychotools", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "psychotools", "stringr"] }, "BTM": { "name": "BTM", @@ -2423,7 +2459,7 @@ "name": "BTSPAS", "version": "2024.5.9", "sha256": "0gc0ik2257zk6bjhwc78z53jg9a34s32wbwdqk25a6m5wvjp2qlj", - "depends": ["actuar", "coda", "data_table", "ggforce", "ggplot2", "gridExtra", "plyr", "R2jags", "reshape2", "scales"] + "depends": ["R2jags", "actuar", "coda", "data_table", "ggforce", "ggplot2", "gridExtra", "plyr", "reshape2", "scales"] }, "BTSR": { "name": "BTSR", @@ -2435,13 +2471,13 @@ "name": "BTYD", "version": "2.4.3", "sha256": "1szkpcmagpig32vbs7klx71avjlmbd0cn123ljpc3i02b55lma7z", - "depends": ["dplyr", "hypergeo", "Matrix", "optimx"] + "depends": ["Matrix", "dplyr", "hypergeo", "optimx"] }, "BTYDplus": { "name": "BTYDplus", "version": "1.2.0", "sha256": "1shai7kij20g3isd6l29i696pkzymr0qq2i9gzfsxmvdb4g4pcm2", - "depends": ["bayesm", "BTYD", "coda", "data_table", "mvtnorm", "Rcpp"] + "depends": ["BTYD", "Rcpp", "bayesm", "coda", "data_table", "mvtnorm"] }, "BTdecayLasso": { "name": "BTdecayLasso", @@ -2451,8 +2487,8 @@ }, "BTtest": { "name": "BTtest", - "version": "0.10.1", - "sha256": "0qx8brb6196jny10vh2licwv9c5w8mcs1ajx377xpyn6p9fryc46", + "version": "0.10.2", + "sha256": "1p32i8fynjh3dkp1jk92v8wa3x9hw4hr9rjvsj6gz7cp79596fb3", "depends": ["Rcpp", "RcppArmadillo"] }, "BUCSS": { @@ -2477,7 +2513,7 @@ "name": "BVSNLP", "version": "1.1.9", "sha256": "1k2sr9wq0q7lq2hmgp75hzxy6v688lw5npwvpma88975yqi6ghiw", - "depends": ["doParallel", "foreach", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical", "doParallel", "foreach"] }, "BWGS": { "name": "BWGS", @@ -2489,7 +2525,7 @@ "name": "BWStest", "version": "0.2.3", "sha256": "1chlszmshda84000jj4q5j2swflj512vfj3h97361aphzhkwri2b", - "depends": ["memoise", "Rcpp"] + "depends": ["Rcpp", "memoise"] }, "BaM": { "name": "BaM", @@ -2497,6 +2533,12 @@ "sha256": "1mfbz8hp6cd170d5y6iva2dbd31rlg6z2dgnfvjp9myqa4cjy40y", "depends": ["MASS", "mice"] }, + "BaSTA": { + "name": "BaSTA", + "version": "2.0.0", + "sha256": "1db4qyg6dmcq2mzmf55n3lxxqk4i7jfz9s32560754h9n0y1l92p", + "depends": ["snowfall"] + }, "BaSkePro": { "name": "BaSkePro", "version": "1.1.1", @@ -2561,37 +2603,37 @@ "name": "BasketballAnalyzeR", "version": "0.5.0", "sha256": "1bad287llg89smqg43lgz2hdkjg3l39mh4k82avgb52xwqp5gjxc", - "depends": ["circlize", "corrplot", "dendextend", "directlabels", "dplyr", "GGally", "ggnetwork", "ggplot2", "ggplotify", "ggrepel", "gridExtra", "hexbin", "magrittr", "MASS", "network", "operators", "PBSmapping", "plyr", "readr", "rlang", "scales", "sna", "sp", "statnet_common", "stringr", "tidyr"] + "depends": ["GGally", "MASS", "PBSmapping", "circlize", "corrplot", "dendextend", "directlabels", "dplyr", "ggnetwork", "ggplot2", "ggplotify", "ggrepel", "gridExtra", "hexbin", "magrittr", "network", "operators", "plyr", "readr", "rlang", "scales", "sna", "sp", "statnet_common", "stringr", "tidyr"] }, "BatchExperiments": { "name": "BatchExperiments", "version": "1.4.3", "sha256": "0g3vr2g4v968rwzja1nngji58960p2r494km8wia7x5w3y69p063", - "depends": ["backports", "BatchJobs", "BBmisc", "checkmate", "data_table", "DBI", "RSQLite"] + "depends": ["BBmisc", "BatchJobs", "DBI", "RSQLite", "backports", "checkmate", "data_table"] }, "BatchGetSymbols": { "name": "BatchGetSymbols", "version": "2.6.4", "sha256": "1sv4p0f8l79wy3q6jwsi3iy7zljc33z9mnyf8ijb23l64w7fvy9i", - "depends": ["cli", "crayon", "curl", "dplyr", "furrr", "future", "lifecycle", "lubridate", "purrr", "quantmod", "rvest", "scales", "stringr", "tibble", "tidyr", "XML", "zoo"] + "depends": ["XML", "cli", "crayon", "curl", "dplyr", "furrr", "future", "lifecycle", "lubridate", "purrr", "quantmod", "rvest", "scales", "stringr", "tibble", "tidyr", "zoo"] }, "BatchJobs": { "name": "BatchJobs", "version": "1.9", "sha256": "0xsw25j2ks9bqgz189qdcyj8hzz93snknlik83nj04s6vy0w7aax", - "depends": ["backports", "BBmisc", "brew", "checkmate", "data_table", "DBI", "digest", "RSQLite", "sendmailR", "stringi"] + "depends": ["BBmisc", "DBI", "RSQLite", "backports", "brew", "checkmate", "data_table", "digest", "sendmailR", "stringi"] }, "BayLum": { "name": "BayLum", "version": "0.3.2", "sha256": "1vkykrwjmm810m29i2l3yps8snysc8s2qqfbgprr4a0a1qyj4nrg", - "depends": ["cli", "coda", "hexbin", "KernSmooth", "Luminescence", "rjags", "runjags", "yaml"] + "depends": ["KernSmooth", "Luminescence", "cli", "coda", "hexbin", "rjags", "runjags", "yaml"] }, "Bayenet": { "name": "Bayenet", "version": "0.2", "sha256": "0h0b6m3lpwjax5vwbmqmfqx55hx3sgbb87jby2lwn3d2v138bpks", - "depends": ["gsl", "hbmem", "MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "SuppDists", "VGAM"] + "depends": ["MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "SuppDists", "VGAM", "gsl", "hbmem"] }, "BayesARIMAX": { "name": "BayesARIMAX", @@ -2603,7 +2645,7 @@ "name": "BayesBEKK", "version": "0.1.1", "sha256": "1vlljv7xdfvbrbxqdi91xrz1aga04aa1pb23kvnmahm2s261map1", - "depends": ["coda", "MTS", "mvtnorm"] + "depends": ["MTS", "coda", "mvtnorm"] }, "BayesBP": { "name": "BayesBP", @@ -2621,7 +2663,7 @@ "name": "BayesCACE", "version": "1.2.3", "sha256": "12vw401d692x2692sykhngi5fk8l6z5724lym97zz9z2wyj29zyk", - "depends": ["coda", "forestplot", "lme4", "metafor", "Rdpack", "rjags"] + "depends": ["Rdpack", "coda", "forestplot", "lme4", "metafor", "rjags"] }, "BayesCR": { "name": "BayesCR", @@ -2639,7 +2681,7 @@ "name": "BayesCVI", "version": "1.0.0", "sha256": "1vm3nkgq7nc3d8zpxhb6p62yf4bhk2xdqkivdw94ml0npd4xsppb", - "depends": ["e1071", "ggplot2", "mclust", "UniversalCVI"] + "depends": ["UniversalCVI", "e1071", "ggplot2", "mclust"] }, "BayesCombo": { "name": "BayesCombo", @@ -2651,7 +2693,7 @@ "name": "BayesComm", "version": "0.1-2", "sha256": "1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk", - "depends": ["abind", "coda", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "coda", "mvtnorm"] }, "BayesDA": { "name": "BayesDA", @@ -2669,7 +2711,7 @@ "name": "BayesDLMfMRI", "version": "0.0.3", "sha256": "06806wckw629gl6p8jbxpg8lh6wsy8nhs2017qcfc3wwxb6dd3jc", - "depends": ["abind", "mathjaxr", "neurobase", "oro_nifti", "pbapply", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "abind", "mathjaxr", "neurobase", "oro_nifti", "pbapply"] }, "BayesDesign": { "name": "BayesDesign", @@ -2681,18 +2723,18 @@ "name": "BayesDissolution", "version": "0.2.1", "sha256": "1x3jn4mdp7csxm6h8rk33h9hlflhkjssqnfzcl3hbkwv4pb97ifl", - "depends": ["coda", "geoR", "MCMCpack", "mnormt", "pscl", "shiny"] + "depends": ["MCMCpack", "coda", "geoR", "mnormt", "pscl", "shiny"] }, "BayesESS": { "name": "BayesESS", "version": "0.1.19", "sha256": "023r5pxqa2ll3vyfmchdlcg6ay0qixphz24078g1immqp43mlrxm", - "depends": ["dfcrm", "LaplacesDemon", "MASS", "MatrixModels", "MCMCpack", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["LaplacesDemon", "MASS", "MCMCpack", "MatrixModels", "Rcpp", "RcppArmadillo", "RcppEigen", "dfcrm"] }, "BayesFBHborrow": { "name": "BayesFBHborrow", - "version": "1.0.1", - "sha256": "1mkz9viwjf9syfgb5dnzknc96qypsjdkwijky4ybyankzg8nwwrs", + "version": "2.0.1", + "sha256": "1s291ins320iqfbrqixxaxvizc8ili27xqp0syy21cjc8y6yl2nn", "depends": ["checkmate", "dplyr", "ggplot2", "invgamma", "magrittr", "mvtnorm", "survival"] }, "BayesFM": { @@ -2705,7 +2747,7 @@ "name": "BayesFactor", "version": "0.9.12-4.7", "sha256": "0z9p9vdcmcdwqmixaiqnhli2b06whbap6y4pqx4a5gcdgxlj09zr", - "depends": ["coda", "hypergeo", "Matrix", "MatrixModels", "mvtnorm", "pbapply", "Rcpp", "RcppEigen", "stringr"] + "depends": ["Matrix", "MatrixModels", "Rcpp", "RcppEigen", "coda", "hypergeo", "mvtnorm", "pbapply", "stringr"] }, "BayesFluxR": { "name": "BayesFluxR", @@ -2717,7 +2759,7 @@ "name": "BayesGOF", "version": "5.2", "sha256": "17wm0228xq3db431abyi9jr0q1q86nnajsn7hmy4dwzgvrlz5s0i", - "depends": ["Bolstad2", "nleqslv", "orthopolynom", "VGAM"] + "depends": ["Bolstad2", "VGAM", "nleqslv", "orthopolynom"] }, "BayesGPfit": { "name": "BayesGPfit", @@ -2735,25 +2777,25 @@ "name": "BayesGmed", "version": "0.0.3", "sha256": "1bfrvrpf0qiwy720hjrmp007z7xd7ylpl68v9gr2g0i4mjz3szdi", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "BayesGrowth": { "name": "BayesGrowth", "version": "1.0.0", "sha256": "0snjl40x8h8v8y6wm8lby4h4wm78qgbaq2jx45s96lz9cmfhdz2c", - "depends": ["AquaticLifeHistory", "bayesplot", "BH", "dplyr", "ggplot2", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tibble", "tidybayes"] + "depends": ["AquaticLifeHistory", "BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "dplyr", "ggplot2", "loo", "rstan", "rstantools", "tibble", "tidybayes"] }, "BayesLCA": { "name": "BayesLCA", "version": "1.9", "sha256": "11ji5s1njip57zkr4bxwp3agx1ddv7yagm5prn9ckcbasan4rbx1", - "depends": ["coda", "e1071", "fields", "MCMCpack", "nlme"] + "depends": ["MCMCpack", "coda", "e1071", "fields", "nlme"] }, "BayesLN": { "name": "BayesLN", "version": "0.2.10", "sha256": "0p8g0h4zqz5njr7lkkv2hhq9qas9lvrxamg8xb9hkqrxfxd0d3nn", - "depends": ["coda", "data_table", "GeneralizedHyperbolic", "gsl", "lme4", "MASS", "Matrix", "optimx", "Rcpp", "RcppEigen"] + "depends": ["GeneralizedHyperbolic", "MASS", "Matrix", "Rcpp", "RcppEigen", "coda", "data_table", "gsl", "lme4", "optimx"] }, "BayesLogit": { "name": "BayesLogit", @@ -2765,19 +2807,19 @@ "name": "BayesMFSurv", "version": "0.1.0", "sha256": "1yxxzwjh1fgfh7qkzf9dfm3x0vbgb0v4p6bf6b5w14kvm06rzhkg", - "depends": ["coda", "FastGP", "MCMCpack", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["FastGP", "MCMCpack", "Rcpp", "RcppArmadillo", "coda", "mvtnorm"] }, "BayesMallows": { "name": "BayesMallows", - "version": "2.2.1", - "sha256": "0i922b8qapm1k4wvy3f6xbf138ihgyv8l2ixsbfl73z3mrm6nyr4", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "Rdpack", "relations", "rlang", "sets", "testthat"] + "version": "2.2.2", + "sha256": "1jgv654k0qkspardlma2z7a854zw7zxk4fflc027wf7mlvs29b4h", + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "ggplot2", "relations", "rlang", "sets", "testthat"] }, "BayesMassBal": { "name": "BayesMassBal", "version": "1.1.0", "sha256": "1cgcx8kvn0bmn8kmq8ri3k98yx085d2qndislbwhn833ws6vkl88", - "depends": ["coda", "HDInterval", "LaplacesDemon", "Matrix", "pracma", "Rdpack", "tmvtnorm"] + "depends": ["HDInterval", "LaplacesDemon", "Matrix", "Rdpack", "coda", "pracma", "tmvtnorm"] }, "BayesMixSurv": { "name": "BayesMixSurv", @@ -2789,37 +2831,37 @@ "name": "BayesMortalityPlus", "version": "0.2.4", "sha256": "15g87wpaj7rsm8dnz7w57vw9bpkj0aj5f6hi8v7m8kamki8m7chm", - "depends": ["dplyr", "ggplot2", "magrittr", "MASS", "mvtnorm", "progress", "scales", "tidyr"] + "depends": ["MASS", "dplyr", "ggplot2", "magrittr", "mvtnorm", "progress", "scales", "tidyr"] }, "BayesMultMeta": { "name": "BayesMultMeta", "version": "0.1.1", "sha256": "09x41r5lhr2dq56b05f0aj8v4s7084d4z90qjqwdkv8zgk664ki0", - "depends": ["assertthat", "Rdpack"] + "depends": ["Rdpack", "assertthat"] }, "BayesMultiMode": { "name": "BayesMultiMode", "version": "0.7.1", "sha256": "0ij1igdnbk3wy01mdimk9k5ajxmx2plla0ykvsmijzz5mcmqyrii", - "depends": ["assertthat", "bayesplot", "dplyr", "ggplot2", "ggpubr", "gtools", "magrittr", "MCMCglmm", "mvtnorm", "posterior", "Rdpack", "sn", "stringr", "tidyr"] + "depends": ["MCMCglmm", "Rdpack", "assertthat", "bayesplot", "dplyr", "ggplot2", "ggpubr", "gtools", "magrittr", "mvtnorm", "posterior", "sn", "stringr", "tidyr"] }, "BayesNSGP": { "name": "BayesNSGP", "version": "0.1.2", "sha256": "0va4gvyfwfdk3yvhdyxc49qlmzxfblwlmwqh79b93zkv8239kkk1", - "depends": ["FNN", "Matrix", "nimble", "StatMatch"] + "depends": ["FNN", "Matrix", "StatMatch", "nimble"] }, "BayesNetBP": { "name": "BayesNetBP", "version": "1.6.1", "sha256": "1c6a82qlcrpbb2c4zp3gk24wcgw6x62lm8hm6n2l1r307dxm2rpb", - "depends": ["bnlearn", "doBy", "fields", "graph", "igraph", "RColorBrewer"] + "depends": ["RColorBrewer", "bnlearn", "doBy", "fields", "graph", "igraph"] }, "BayesOrdDesign": { "name": "BayesOrdDesign", "version": "0.1.2", "sha256": "1417zd1n5sip999n6q6bgs85c0000ksl73a4p94y0lmdn27i8pmj", - "depends": ["coda", "ggplot2", "gsDesign", "madness", "ordinal", "R2jags", "rjags", "rjmcmc", "schoolmath", "superdiag"] + "depends": ["R2jags", "coda", "ggplot2", "gsDesign", "madness", "ordinal", "rjags", "rjmcmc", "schoolmath", "superdiag"] }, "BayesPPD": { "name": "BayesPPD", @@ -2831,7 +2873,7 @@ "name": "BayesPPDSurv", "version": "1.0.3", "sha256": "1n954qsld509hf47hz7m0998lb1pc8mj0r8i67v0qx9qvr39jmm2", - "depends": ["dplyr", "Rcpp", "RcppArmadillo", "RcppDist", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppDist", "dplyr", "tidyr"] }, "BayesPieceHazSelect": { "name": "BayesPieceHazSelect", @@ -2843,7 +2885,7 @@ "name": "BayesPostEst", "version": "0.3.2", "sha256": "0r05by4w80j6hb22v3ibj686ixxbj7lkxq499fciz5lqs4lxzf3h", - "depends": ["brms", "carData", "caTools", "coda", "dplyr", "ggplot2", "ggridges", "HDInterval", "MCMCpack", "R2jags", "R2WinBUGS", "reshape2", "rjags", "rlang", "ROCR", "rstanarm", "runjags", "texreg", "tidyr"] + "depends": ["HDInterval", "MCMCpack", "R2WinBUGS", "R2jags", "ROCR", "brms", "caTools", "carData", "coda", "dplyr", "ggplot2", "ggridges", "reshape2", "rjags", "rlang", "rstanarm", "runjags", "texreg", "tidyr"] }, "BayesProject": { "name": "BayesProject", @@ -2855,7 +2897,7 @@ "name": "BayesRGMM", "version": "2.2", "sha256": "0yvjl5kzmh2c7c00jk38cs5g6g0yhrc86p5jn8zf10349md3dpcv", - "depends": ["abind", "batchmeans", "MASS", "msm", "mvtnorm", "plyr", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "reshape"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "abind", "batchmeans", "msm", "mvtnorm", "plyr", "reshape"] }, "BayesRS": { "name": "BayesRS", @@ -2885,13 +2927,13 @@ "name": "BayesS5", "version": "1.41", "sha256": "0vs6s50h4gpxda9lbxfgn76k9kp81l62a6bv22r7ixsjlnd4baql", - "depends": ["abind", "Matrix", "snowfall", "splines2"] + "depends": ["Matrix", "abind", "snowfall", "splines2"] }, "BayesSUR": { "name": "BayesSUR", - "version": "2.2-0", - "sha256": "1v5m4m1dqvn1scg27ll4bfq656zxx26jbvgk47p83vlll9k6msn3", - "depends": ["igraph", "Matrix", "Rcpp", "RcppArmadillo", "tikzDevice", "xml2"] + "version": "2.2-1", + "sha256": "0zm1591y4iwz006p6a6vjv1q0vl8jdzr5v1cfqixqvi8wd3rs1s4", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "igraph", "tikzDevice", "xml2"] }, "BayesSampling": { "name": "BayesSampling", @@ -2903,7 +2945,7 @@ "name": "BayesSenMC", "version": "0.1.5", "sha256": "16949bcakx4a77md1rm6364mzsjxr7gpmz2rxnslhz2szx4cnnaj", - "depends": ["BH", "dplyr", "ggplot2", "lme4", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "ggplot2", "lme4", "rstan", "rstantools"] }, "BayesSurvival": { "name": "BayesSurvival", @@ -2915,13 +2957,13 @@ "name": "BayesSurvive", "version": "0.0.2", "sha256": "1m7acw40hvjpgjzyz8fpqzvkz1dadq829klba0343g8h0hmfcd65", - "depends": ["GGally", "ggplot2", "mvtnorm", "Rcpp", "RcppArmadillo", "riskRegression", "survival"] + "depends": ["GGally", "Rcpp", "RcppArmadillo", "ggplot2", "mvtnorm", "riskRegression", "survival"] }, "BayesTools": { "name": "BayesTools", "version": "0.2.17", "sha256": "1vwc64s1a10d2haw7bi5896hhipbb1y7aks4mzjpfrp4zavbzlpn", - "depends": ["bridgesampling", "coda", "extraDistr", "ggplot2", "mvtnorm", "Rdpack", "rlang"] + "depends": ["Rdpack", "bridgesampling", "coda", "extraDistr", "ggplot2", "mvtnorm", "rlang"] }, "BayesTree": { "name": "BayesTree", @@ -2963,13 +3005,13 @@ "name": "BayesfMRI", "version": "0.3.11", "sha256": "19yn8d3jbh1fpxdmqvz3yflnml4fdxb966w44yqha4wjhzfp6hym", - "depends": ["ciftiTools", "excursions", "fMRItools", "foreach", "MASS", "Matrix", "matrixStats", "Rcpp", "RcppEigen", "sp"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "ciftiTools", "excursions", "fMRItools", "foreach", "matrixStats", "sp"] }, "BayesianFactorZoo": { "name": "BayesianFactorZoo", "version": "0.0.0.2", "sha256": "1w06hizaj4vxrhxv4jgr0s5ak1w0rr3j2zcdz7cf0mnrbg600dfd", - "depends": ["coda", "ggplot2", "MASS", "Matrix", "matrixcalc", "MCMCpack", "mvtnorm", "nse", "Rdpack", "reshape2", "timeSeries"] + "depends": ["MASS", "MCMCpack", "Matrix", "Rdpack", "coda", "ggplot2", "matrixcalc", "mvtnorm", "nse", "reshape2", "timeSeries"] }, "BayesianGLasso": { "name": "BayesianGLasso", @@ -2981,31 +3023,31 @@ "name": "BayesianLaterality", "version": "0.1.2", "sha256": "1dy00xgz9cc65aj39nf76crhfxfyackpcniwadrh38mk8zpbka42", - "depends": ["dplyr", "purrr", "Rdpack", "rlang", "tidyr", "tmvtnorm"] + "depends": ["Rdpack", "dplyr", "purrr", "rlang", "tidyr", "tmvtnorm"] }, "BayesianMCPMod": { "name": "BayesianMCPMod", "version": "1.0.1", "sha256": "1767rjyd5vl73lqknpxkgcv38rhxdm837zr7c3d5d6f9rdh8rgyw", - "depends": ["checkmate", "DoseFinding", "ggplot2", "nloptr", "RBesT"] + "depends": ["DoseFinding", "RBesT", "checkmate", "ggplot2", "nloptr"] }, "BayesianMediationA": { "name": "BayesianMediationA", "version": "1.0.1", "sha256": "1ygc0xhk7mk7pkqn0v9n23j1m75rr1r2ar30r386c1av3jh7krnw", - "depends": ["car", "gplots", "lattice", "R2jags", "survival"] + "depends": ["R2jags", "car", "gplots", "lattice", "survival"] }, "BayesianNetwork": { "name": "BayesianNetwork", - "version": "0.3", - "sha256": "0nyv2maqssayd79fs0zhpblscd7nsvw7k4fmqzpfz2xgivnx2i5p", - "depends": ["bnlearn", "heatmaply", "lattice", "networkD3", "plotly", "rintrojs", "shiny", "shinyAce", "shinydashboard", "shinyWidgets"] + "version": "0.3.2", + "sha256": "1j0mgjib2v60sfjic8kli69lcbdkakp0fcgx2dhh7p1rq4xx88j1", + "depends": ["bnlearn", "heatmaply", "lattice", "networkD3", "plotly", "rintrojs", "shiny", "shinyAce", "shinyWidgets", "shinydashboard"] }, "BayesianPlatformDesignTimeTrend": { "name": "BayesianPlatformDesignTimeTrend", "version": "1.2.3", "sha256": "1v06airw3zzkvb5qmn0abyhkdp51wjmax101ljj9ibx01nj01zdv", - "depends": ["BH", "BiocManager", "boot", "doParallel", "foreach", "ggplot2", "ggpubr", "iterators", "laGP", "lhs", "matrixStats", "RColorBrewer", "Rcpp", "RcppEigen", "RcppParallel", "reshape", "rstan", "rstantools", "StanHeaders", "stringr"] + "depends": ["BH", "BiocManager", "RColorBrewer", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "boot", "doParallel", "foreach", "ggplot2", "ggpubr", "iterators", "laGP", "lhs", "matrixStats", "reshape", "rstan", "rstantools", "stringr"] }, "BayesianPower": { "name": "BayesianPower", @@ -3023,7 +3065,7 @@ "name": "BayesianTools", "version": "0.1.8", "sha256": "1ldx75g4ws2yrnq4xyj3j83xjhakhgbhn174lwqzviqynvbbshzm", - "depends": ["bridgesampling", "coda", "DHARMa", "ellipse", "emulator", "gap", "IDPmisc", "MASS", "Matrix", "msm", "mvtnorm", "numDeriv", "Rcpp", "tmvtnorm"] + "depends": ["DHARMa", "IDPmisc", "MASS", "Matrix", "Rcpp", "bridgesampling", "coda", "ellipse", "emulator", "gap", "msm", "mvtnorm", "numDeriv", "tmvtnorm"] }, "Bayesiangammareg": { "name": "Bayesiangammareg", @@ -3041,7 +3083,7 @@ "name": "Bayesrel", "version": "0.7.7", "sha256": "0c6vpkljhisdznxw1g204gyfvpy2zs8yqymdbp35zxddygfdchgd", - "depends": ["coda", "LaplacesDemon", "lavaan", "MASS", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["LaplacesDemon", "MASS", "Rcpp", "RcppArmadillo", "Rdpack", "coda", "lavaan"] }, "BcDiag": { "name": "BcDiag", @@ -3053,19 +3095,19 @@ "name": "Bchron", "version": "4.7.6", "sha256": "1s8bx9a5rpcrw0msnjf565crz3d2fykvy5fj1chbqxzjh7qm865w", - "depends": ["checkmate", "coda", "dplyr", "ggforce", "ggplot2", "ggridges", "magrittr", "MASS", "mclust", "purrr", "scales", "stringr"] + "depends": ["MASS", "checkmate", "coda", "dplyr", "ggforce", "ggplot2", "ggridges", "magrittr", "mclust", "purrr", "scales", "stringr"] }, "BeQut": { "name": "BeQut", "version": "0.1.0", "sha256": "065hjpz4162j2ykcwnri25j4mkqf7yl5bf9ja3xn7yvszif0pjh9", - "depends": ["jagsUI", "lqmm", "MASS", "survival"] + "depends": ["MASS", "jagsUI", "lqmm", "survival"] }, "BeSS": { "name": "BeSS", "version": "2.0.4", "sha256": "1y45lqw6b0qzzg9j3cs18fvzd4q7l6njhjkzpcrik2lgwkzamc8a", - "depends": ["glmnet", "Matrix", "Rcpp", "RcppEigen", "survival"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "glmnet", "survival"] }, "BeastJar": { "name": "BeastJar", @@ -3075,21 +3117,21 @@ }, "BeeBDC": { "name": "BeeBDC", - "version": "1.1.1", - "sha256": "05c215m8zd6wcyjgvpkdmzghb2sp8677mj4shnjzqknbvmgqm9hh", - "depends": ["circlize", "CoordinateCleaner", "cowplot", "dplyr", "forcats", "ggplot2", "ggspatial", "here", "igraph", "lubridate", "mgsub", "openxlsx", "paletteer", "readr", "rnaturalearth", "sf", "stringr", "tidyselect"] + "version": "1.2.0", + "sha256": "1x2inx2rvlskzpjgivw0wndihsbbbw85nm0avg2csfk8388qwx9c", + "depends": ["CoordinateCleaner", "circlize", "cowplot", "dplyr", "forcats", "ggplot2", "ggspatial", "here", "igraph", "lubridate", "mgsub", "openxlsx", "paletteer", "readr", "rnaturalearth", "sf", "stringr", "tidyselect"] }, "BeeGUTS": { "name": "BeeGUTS", "version": "1.1.3", "sha256": "1880bsgwal06i7q3la1f8alrhj43mnsim6n8inrnaqcbqgi69v3n", - "depends": ["BH", "cowplot", "data_table", "dplyr", "ggplot2", "gridExtra", "magrittr", "odeGUTS", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cowplot", "data_table", "dplyr", "ggplot2", "gridExtra", "magrittr", "odeGUTS", "rstan", "rstantools", "tidyr"] }, "Benchmarking": { "name": "Benchmarking", "version": "0.32", "sha256": "0fv0i4cpsisk5wa6hgvp75r170ir1zyr2wqbkzfz3qhr43z0jayx", - "depends": ["lpSolveAPI", "quadprog", "Rcpp", "ucminf"] + "depends": ["Rcpp", "lpSolveAPI", "quadprog", "ucminf"] }, "BenfordTests": { "name": "BenfordTests", @@ -3101,25 +3143,25 @@ "name": "Bergm", "version": "5.0.7", "sha256": "13wdkbjnqj3dk8fpk8vblkf4z79j87gdszjdzwysq9i10l6yl6ir", - "depends": ["coda", "ergm", "Matrix", "matrixcalc", "MCMCpack", "mvtnorm", "network", "Rglpk", "statnet_common"] + "depends": ["MCMCpack", "Matrix", "Rglpk", "coda", "ergm", "matrixcalc", "mvtnorm", "network", "statnet_common"] }, "Bernadette": { "name": "Bernadette", "version": "1.1.5", "sha256": "08q0jarv737p4mis7kql1ny9hrm86w49kdn47r94id4895l052ck", - "depends": ["BH", "ggplot2", "gridExtra", "magrittr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "scales", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "gridExtra", "magrittr", "rstan", "rstantools", "scales"] }, "Bessel": { "name": "Bessel", - "version": "0.6-0", - "sha256": "0iwm08nhlivi4zwcqdi296a1l4n4lfanfxhaysh9vcsyk1kpiacf", + "version": "0.6-1", + "sha256": "0n2k33n4r1hx20qr2hh5i6a2rcyikd6iwihhknzz8nvx8f2ms9yh", "depends": ["Rmpfr"] }, "Bestie": { "name": "Bestie", "version": "0.1.5", "sha256": "1j3xnwq9faim8cjb6cz54mix7ly8dzxa5qsdglcgl2gfbvzbb9s1", - "depends": ["BiDAG", "mvtnorm", "Rcpp"] + "depends": ["BiDAG", "Rcpp", "mvtnorm"] }, "BetaBit": { "name": "BetaBit", @@ -3173,7 +3215,7 @@ "name": "BiDAG", "version": "2.1.4", "sha256": "0gncxn558mdasr63jvqyavd6nhg6762rk0g0a2b7hfvcivjb6bd5", - "depends": ["coda", "graph", "Matrix", "pcalg", "RBGL", "Rcpp", "Rgraphviz"] + "depends": ["Matrix", "RBGL", "Rcpp", "Rgraphviz", "coda", "graph", "pcalg"] }, "BiDimRegression": { "name": "BiDimRegression", @@ -3191,7 +3233,7 @@ "name": "BiSEp", "version": "2.3", "sha256": "1xg2m8rvxwpj47nb20kyd5hpa1lshg58bi0alf1v476yhcwqgrhx", - "depends": ["AnnotationDbi", "GO_db", "GOSemSim", "mclust", "org_Hs_eg_db"] + "depends": ["AnnotationDbi", "GOSemSim", "GO_db", "mclust", "org_Hs_eg_db"] }, "BiTrinA": { "name": "BiTrinA", @@ -3203,7 +3245,7 @@ "name": "BiasCorrector", "version": "0.2.2", "sha256": "0a6iiy4iw8w8s4kbjf6r0gji6izf1zdb99r8vfbvgzzwg2pxx4h4", - "depends": ["data_table", "DT", "magrittr", "rBiasCorrection", "shiny", "shinydashboard", "shinyjs"] + "depends": ["DT", "data_table", "magrittr", "rBiasCorrection", "shiny", "shinydashboard", "shinyjs"] }, "BiasedUrn": { "name": "BiasedUrn", @@ -3221,7 +3263,7 @@ "name": "BifactorIndicesCalculator", "version": "0.2.2", "sha256": "1vnwksw0j4lc2knlcmm5748pf4d7r44sn34s1mrv9p50hlnkk85p", - "depends": ["lavaan", "mirt", "mnormt", "MplusAutomation", "tidyr"] + "depends": ["MplusAutomation", "lavaan", "mirt", "mnormt", "tidyr"] }, "BigQuic": { "name": "BigQuic", @@ -3233,7 +3275,7 @@ "name": "BigVAR", "version": "1.1.2", "sha256": "1f67gk54gzdlil79gqqws0i6j0rvjqk4k0bhdb9adcvcsdxfkwwy", - "depends": ["abind", "lattice", "MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "zoo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "abind", "lattice", "zoo"] }, "BimodalIndex": { "name": "BimodalIndex", @@ -3251,25 +3293,25 @@ "name": "BinMat", "version": "0.1.5", "sha256": "1brgv0zmprvwx6x670mmxxlk50nh4ds63bip48mlh0p1qv8pm9db", - "depends": ["ggpubr", "MASS", "pvclust", "tibble"] + "depends": ["MASS", "ggpubr", "pvclust", "tibble"] }, "BinNonNor": { "name": "BinNonNor", "version": "1.5.3", "sha256": "0ijjv2w4bx0i3mks7s4vii21hc9iq69p3jld1qg68a6115njsm24", - "depends": ["BB", "corpcor", "Matrix", "mvtnorm"] + "depends": ["BB", "Matrix", "corpcor", "mvtnorm"] }, "BinNor": { "name": "BinNor", "version": "2.3.3", "sha256": "07r7nf4ygilp470z93x9dc5zddc96m2dkw6d2s4an8fbr4pljc1y", - "depends": ["corpcor", "Matrix", "mvtnorm", "psych"] + "depends": ["Matrix", "corpcor", "mvtnorm", "psych"] }, "BinOrdNonNor": { "name": "BinOrdNonNor", "version": "1.5.2", "sha256": "17981jfjjgsfzjwbv9cjgqdha846rf03nfd8kgj4wiljgz855mz9", - "depends": ["BB", "corpcor", "GenOrd", "Matrix", "mvtnorm", "OrdNor"] + "depends": ["BB", "GenOrd", "Matrix", "OrdNor", "corpcor", "mvtnorm"] }, "BinSegBstrap": { "name": "BinSegBstrap", @@ -3287,7 +3329,7 @@ "name": "BinaryDosage", "version": "1.0.0", "sha256": "10nf11c57j0ls4znm137w831s7zmihg7bybrfg666hx7c9amspjw", - "depends": ["digest", "prodlim", "Rcpp"] + "depends": ["Rcpp", "digest", "prodlim"] }, "BinaryEMVS": { "name": "BinaryEMVS", @@ -3299,7 +3341,7 @@ "name": "BinaryEPPM", "version": "3.0", "sha256": "1sjwh423vap4gd44mkpdhsmp90y9rzr3zkzzakbfczawxz3mbcrp", - "depends": ["expm", "Formula", "lmtest", "numDeriv"] + "depends": ["Formula", "expm", "lmtest", "numDeriv"] }, "BinarybalancedCut": { "name": "BinarybalancedCut", @@ -3311,7 +3353,7 @@ "name": "BioCircos", "version": "0.3.4", "sha256": "1gl57r47p5z1wzs94xzc26j2r8z5hpqr4163b01x6jwzvbrlfwhz", - "depends": ["htmlwidgets", "jsonlite", "plyr", "RColorBrewer"] + "depends": ["RColorBrewer", "htmlwidgets", "jsonlite", "plyr"] }, "BioCro": { "name": "BioCro", @@ -3323,25 +3365,25 @@ "name": "BioInsight", "version": "0.3.1", "sha256": "129w9643l01y316hm0qcsmxzh5lsdmq6xmiz4rhmdh0dcnw2s93n", - "depends": ["edgeR", "knitr", "limma", "RColorBrewer", "wordcloud"] + "depends": ["RColorBrewer", "edgeR", "knitr", "limma", "wordcloud"] }, "BioM2": { "name": "BioM2", - "version": "1.0.7", - "sha256": "1nr8vb5vw5r91vp700c2p4bqx99gp9xb9ch00fwad8rhv0h1yy4x", - "depends": ["caret", "CMplot", "ggforce", "ggnetwork", "ggplot2", "ggpubr", "ggsci", "ggstatsplot", "ggthemes", "htmlwidgets", "igraph", "jiebaR", "mlr3", "mlr3verse", "ROCR", "uwot", "viridis", "webshot", "WGCNA", "wordcloud2"] + "version": "1.0.9", + "sha256": "1x2d0y6jbwvdb8ixpi918g4apcmf018rk18s0h81qzbfp61l9yl3", + "depends": ["CMplot", "ROCR", "WGCNA", "caret", "ggforce", "ggnetwork", "ggplot2", "ggpubr", "ggsci", "ggstatsplot", "ggthemes", "htmlwidgets", "igraph", "jiebaR", "mlr3", "mlr3verse", "uwot", "viridis", "webshot", "wordcloud2"] }, "BioMark": { "name": "BioMark", "version": "0.4.5", "sha256": "1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m", - "depends": ["glmnet", "MASS", "pls", "st"] + "depends": ["MASS", "glmnet", "pls", "st"] }, "BioPET": { "name": "BioPET", "version": "0.2.2", "sha256": "0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n", - "depends": ["ggplot2", "gridExtra", "pROC", "VGAM"] + "depends": ["VGAM", "ggplot2", "gridExtra", "pROC"] }, "BioPETsurv": { "name": "BioPETsurv", @@ -3353,7 +3395,7 @@ "name": "BioPred", "version": "1.0.1", "sha256": "04v38zsg5n5pzg817pkz2jg8sgg1ckd909ckrapbdncyh3wsawan", - "depends": ["car", "ggplot2", "mgcv", "onewaytests", "pROC", "PropCIs", "survival", "survminer", "xgboost"] + "depends": ["PropCIs", "car", "ggplot2", "mgcv", "onewaytests", "pROC", "survival", "survminer", "xgboost"] }, "BioProbability": { "name": "BioProbability", @@ -3373,6 +3415,12 @@ "sha256": "0w8ly4pk0zv6rnmbzfq3i8sd4h4gjsxlnhj5nlyfr72687jjx5cm", "depends": ["ggplot2"] }, + "BioTIMEr": { + "name": "BioTIMEr", + "version": "0.2.3", + "sha256": "027kx7244j575wn3yxhsmhbg2yaf1w611jvjnzaxivpns56rvg33", + "depends": ["checkmate", "dggridR", "dplyr", "ggplot2", "tidyr", "vegan"] + }, "BioVenn": { "name": "BioVenn", "version": "1.1.3", @@ -3395,13 +3443,13 @@ "name": "BiodiversityR", "version": "2.16-1", "sha256": "059kj0cnb3fpqngww6560mqg6c4dsh5w6484v23wnmng064rf1fi", - "depends": ["ggplot2", "Rcmdr", "vegan"] + "depends": ["Rcmdr", "ggplot2", "vegan"] }, "Bioi": { "name": "Bioi", "version": "0.2.10", "sha256": "1ay8889490nfhxhh72fvk9z4h58xknm2b145xhbx2wbzj65zf9ib", - "depends": ["assertthat", "dplyr", "igraph", "Rcpp"] + "depends": ["Rcpp", "assertthat", "dplyr", "igraph"] }, "Biostatistics": { "name": "Biostatistics", @@ -3413,7 +3461,7 @@ "name": "BiostatsUHNplus", "version": "0.0.10", "sha256": "0wrppamh4m47zczci3csqfijf2hyz4lb5ks2z8h2ybn8lcnbjxgp", - "depends": ["afex", "coda", "cowplot", "dplyr", "forcats", "ggh4x", "ggplot2", "lifecycle", "MCMCglmm", "modeest", "openxlsx", "plyr", "purrr", "reportRmd", "rlang", "rstatix", "stringi", "stringr", "tibble"] + "depends": ["MCMCglmm", "afex", "coda", "cowplot", "dplyr", "forcats", "ggh4x", "ggplot2", "lifecycle", "modeest", "openxlsx", "plyr", "purrr", "reportRmd", "rlang", "rstatix", "stringi", "stringr", "tibble"] }, "BipartiteModularityMaximization": { "name": "BipartiteModularityMaximization", @@ -3443,7 +3491,7 @@ "name": "BivRec", "version": "1.2.1", "sha256": "0qqjp9m360db3vz15zpbpqbm8v112n9mchcvsc3iiv60ayfimbg4", - "depends": ["dplyr", "MASS", "Rcpp", "stringr", "survival"] + "depends": ["MASS", "Rcpp", "dplyr", "stringr", "survival"] }, "BivRegBLS": { "name": "BivRegBLS", @@ -3477,27 +3525,27 @@ }, "Blendstat": { "name": "Blendstat", - "version": "1.0.4", - "sha256": "0nh5nq8g009vbb4mmjcrhg46yi77dk1gza4si21m58b26qf5riy5", - "depends": ["lattice", "MASS"] + "version": "1.0.5", + "sha256": "1nz5gwsjlvk6lajiyf0j2max6q5ifsj1arsbn1l4x6z8m7psm9wp", + "depends": ["MASS", "lattice"] }, "BlockCov": { "name": "BlockCov", "version": "0.1.1", "sha256": "1ilqd8kvhlq0nc1n4y7g0aiwran3kyqs8i143j6dv2wy3myn5x0l", - "depends": ["BBmisc", "dplyr", "magrittr", "Matrix", "Rdpack", "rlang", "tibble"] + "depends": ["BBmisc", "Matrix", "Rdpack", "dplyr", "magrittr", "rlang", "tibble"] }, "BlockMissingData": { "name": "BlockMissingData", "version": "0.1.0", "sha256": "12jgf58k3dgbyb7x4skcdc10m8pvyx8kzqq6fi4wn5x1g5595nxy", - "depends": ["doParallel", "foreach", "glmnet", "glmnetcr", "MASS", "Matrix", "pryr"] + "depends": ["MASS", "Matrix", "doParallel", "foreach", "glmnet", "glmnetcr", "pryr"] }, "BlockmodelingGUI": { "name": "BlockmodelingGUI", "version": "1.8.4", "sha256": "09sbxwzvnnzjv5gy0zyd1lvm1z44ywqvanj99i15l0lp66l54572", - "depends": ["blockmodeling", "DT", "htmlwidgets", "igraph", "intergraph", "network", "shiny", "shinybusy", "shinyjs", "shinythemes", "visNetwork"] + "depends": ["DT", "blockmodeling", "htmlwidgets", "igraph", "intergraph", "network", "shiny", "shinybusy", "shinyjs", "shinythemes", "visNetwork"] }, "BlythStillCasellaCI": { "name": "BlythStillCasellaCI", @@ -3509,7 +3557,7 @@ "name": "BoSSA", "version": "3.7", "sha256": "0qhcar3grp6l6islbjc27jqvgh37kkdi0nql6plsqwilldv3kis6", - "depends": ["ape", "jsonlite", "phangorn", "plotrix", "RSQLite"] + "depends": ["RSQLite", "ape", "jsonlite", "phangorn", "plotrix"] }, "BoardGames": { "name": "BoardGames", @@ -3569,7 +3617,7 @@ "name": "BoolNet", "version": "2.1.9", "sha256": "19xnmz5dq8lvk1va8zi931xkawkwfcfjf4vh0dsg5n8zhy4p321f", - "depends": ["igraph", "XML"] + "depends": ["XML", "igraph"] }, "Boom": { "name": "Boom", @@ -3587,7 +3635,7 @@ "name": "BoostMLR", "version": "1.0.3", "sha256": "0gk8jf04qda1qsc6987d8nfa453v9cqkjsvvrrg68yx3fd96m8aj", - "depends": ["nlme", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "nlme"] }, "BootMRMR": { "name": "BootMRMR", @@ -3611,13 +3659,13 @@ "name": "BootstrapQTL", "version": "1.0.5", "sha256": "04lyr9x6lz4q5y70p92ffdil2i9f1fsykw5wh6wsv0qcqypdmawy", - "depends": ["data_table", "foreach", "MatrixEQTL"] + "depends": ["MatrixEQTL", "data_table", "foreach"] }, "Boptbd": { "name": "Boptbd", "version": "1.0.5", "sha256": "1p786avc37yq5g01zh6sqx7b1rvbxrh6gbxsad4bdvr12cjdsss6", - "depends": ["igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "igraph"] }, "Boruta": { "name": "Boruta", @@ -3647,7 +3695,7 @@ "name": "BoutrosLab.plotting.general", "version": "7.1.0", "sha256": "1rmd050sla0d3m2q4cadw84v7p9v05v0ifcbzind771sibr3vcji", - "depends": ["cluster", "e1071", "gridExtra", "gtable", "hexbin", "lattice", "latticeExtra", "MASS"] + "depends": ["MASS", "cluster", "e1071", "gridExtra", "gtable", "hexbin", "lattice", "latticeExtra"] }, "BradleyTerry2": { "name": "BradleyTerry2", @@ -3659,13 +3707,13 @@ "name": "BrailleR", "version": "1.0.2", "sha256": "1gh4n9zl7yczmhy85xmsx1mh9qmc99xvhmm5cdnjcb644i2n214k", - "depends": ["devtools", "dplyr", "extrafont", "ggplot2", "gridGraphics", "gridSVG", "hunspell", "knitr", "mathjaxr", "moments", "quarto", "Rdpack", "rmarkdown", "roloc", "rolocISCCNBS", "tidyr", "whisker", "XML", "xtable"] + "depends": ["Rdpack", "XML", "devtools", "dplyr", "extrafont", "ggplot2", "gridGraphics", "gridSVG", "hunspell", "knitr", "mathjaxr", "moments", "quarto", "rmarkdown", "roloc", "rolocISCCNBS", "tidyr", "whisker", "xtable"] }, "BrainCon": { "name": "BrainCon", "version": "0.3.0", "sha256": "137pagkjb4xzk3skmsf5vlp8q0k79zl9xjz8wwda1mdrknkdnbj6", - "depends": ["glmnet", "MASS"] + "depends": ["MASS", "glmnet"] }, "BranchGLM": { "name": "BranchGLM", @@ -3679,6 +3727,12 @@ "sha256": "15znbxpv0kcl8qqihl9f5irvcsyanfhszcz0xq6r7g8gsay4s760", "depends": [] }, + "BrazilCrime": { + "name": "BrazilCrime", + "version": "0.2", + "sha256": "17p8fgv7pqdx19fpgjax95bl90918w34qxfnhw6xy2wsmp28y6fn", + "depends": ["dplyr", "geobr", "janitor", "openxlsx", "tidyr"] + }, "BrazilMet": { "name": "BrazilMet", "version": "0.2.0", @@ -3701,13 +3755,13 @@ "name": "BrokenAdaptiveRidge", "version": "1.0.0", "sha256": "0f46wwyfcqslk25cbm63pbnp8bwamqhr4g4wdlrqn666yiwn1sc2", - "depends": ["bit64", "Cyclops", "futile_logger"] + "depends": ["Cyclops", "bit64", "futile_logger"] }, "BrownDog": { "name": "BrownDog", "version": "0.2.1", "sha256": "0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938", - "depends": ["httpuv", "jsonlite", "RCurl"] + "depends": ["RCurl", "httpuv", "jsonlite"] }, "Brq": { "name": "Brq", @@ -3725,7 +3779,7 @@ "name": "Buddle", "version": "2.0.1", "sha256": "0hi516cbl93z00jpdgyp3j5hz0xf594vn65p6ahpffwzh1l8s1cf", - "depends": ["plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "plyr"] }, "BuildSys": { "name": "BuildSys", @@ -3753,9 +3807,9 @@ }, "BuyseTest": { "name": "BuyseTest", - "version": "3.0.2", - "sha256": "04na2yiykcnbscg5ibrkynjhp0ywdlc11fpz2p68bzz928bp9zyx", - "depends": ["data_table", "doSNOW", "foreach", "ggplot2", "lava", "prodlim", "Rcpp", "RcppArmadillo", "riskRegression", "rlang", "scales"] + "version": "3.0.4", + "sha256": "17nf1wy5dyxigr7w2bfj34kx94y7qdh60ra2j6f4kkpy7q0awl3y", + "depends": ["Rcpp", "RcppArmadillo", "data_table", "doSNOW", "foreach", "ggplot2", "lava", "prodlim", "riskRegression", "rlang", "scales"] }, "Bvalue": { "name": "Bvalue", @@ -3779,7 +3833,7 @@ "name": "C443", "version": "3.4.0", "sha256": "021i36gmayvc1qqxjy59b2m7z299yaj0wxcaqhb0j2kbaj439p8w", - "depends": ["cluster", "doParallel", "foreach", "ggplot2", "gridExtra", "igraph", "MASS", "partykit", "plyr", "randomForest", "ranger", "RColorBrewer", "rpart"] + "depends": ["MASS", "RColorBrewer", "cluster", "doParallel", "foreach", "ggplot2", "gridExtra", "igraph", "partykit", "plyr", "randomForest", "ranger", "rpart"] }, "C50": { "name": "C50", @@ -3797,7 +3851,7 @@ "name": "CACIMAR", "version": "1.0.0", "sha256": "0fdi2ls0j10fky3jygqx93h8m1957cdbn1vxdi69bq08xf2c5n5h", - "depends": ["dplyr", "pbapply", "pheatmap", "psych", "reshape2", "ROCR", "Seurat", "viridisLite"] + "depends": ["ROCR", "Seurat", "dplyr", "pbapply", "pheatmap", "psych", "reshape2", "viridisLite"] }, "CADFtest": { "name": "CADFtest", @@ -3821,7 +3875,7 @@ "name": "CALANGO", "version": "1.0.16", "sha256": "1rs992i6xmisx180yyc6z7qlig9a4kj7r3vr5ysf6kcgycj72nj1", - "depends": ["ape", "assertthat", "BiocManager", "dendextend", "DT", "ggplot2", "heatmaply", "htmltools", "htmlwidgets", "knitr", "nlme", "pbmcapply", "pkgdown", "plotly", "rmarkdown", "taxize"] + "depends": ["BiocManager", "DT", "ape", "assertthat", "dendextend", "ggplot2", "heatmaply", "htmltools", "htmlwidgets", "knitr", "nlme", "pbmcapply", "pkgdown", "plotly", "rmarkdown", "taxize"] }, "CALF": { "name": "CALF", @@ -3845,25 +3899,25 @@ "name": "CAMML", "version": "1.0.0", "sha256": "0h2wfbafgcci1rrdq6qc634nf0d1h47ccajziifg1fhk7m8s56i7", - "depends": ["AnnotationDbi", "BiocManager", "edgeR", "MASS", "Matrix", "org_Dr_eg_db", "org_Hs_eg_db", "org_Mm_eg_db", "Seurat", "SeuratObject", "VAM"] + "depends": ["AnnotationDbi", "BiocManager", "MASS", "Matrix", "Seurat", "SeuratObject", "VAM", "edgeR", "org_Dr_eg_db", "org_Hs_eg_db", "org_Mm_eg_db"] }, "CANSIM2R": { "name": "CANSIM2R", "version": "1.14.1", "sha256": "1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc", - "depends": ["downloader", "Hmisc", "reshape2"] + "depends": ["Hmisc", "downloader", "reshape2"] }, "CARBayes": { "name": "CARBayes", "version": "6.1.1", "sha256": "10dqplygp74mphf0mwv4c6d6c1lbi3k41djqrv2yglq799lkm7mi", - "depends": ["CARBayesdata", "coda", "dplyr", "GGally", "glmnet", "igraph", "mapview", "MASS", "MCMCpack", "RColorBrewer", "Rcpp", "sf", "spam", "spdep", "truncnorm"] + "depends": ["CARBayesdata", "GGally", "MASS", "MCMCpack", "RColorBrewer", "Rcpp", "coda", "dplyr", "glmnet", "igraph", "mapview", "sf", "spam", "spdep", "truncnorm"] }, "CARBayesST": { "name": "CARBayesST", "version": "4.0", "sha256": "0wrxpx4zrlndyp74iwrr6bny2l31a333a6nmk3dzi7j3skaj7zf5", - "depends": ["CARBayesdata", "coda", "dplyr", "GGally", "ggplot2", "gridExtra", "gtools", "leaflet", "MASS", "matrixStats", "MCMCpack", "Rcpp", "sf", "spam", "spdep", "truncdist", "truncnorm"] + "depends": ["CARBayesdata", "GGally", "MASS", "MCMCpack", "Rcpp", "coda", "dplyr", "ggplot2", "gridExtra", "gtools", "leaflet", "matrixStats", "sf", "spam", "spdep", "truncdist", "truncnorm"] }, "CARBayesdata": { "name": "CARBayesdata", @@ -3875,31 +3929,25 @@ "name": "CARM", "version": "1.1.0", "sha256": "068rpz7bjc767yw4vcrf63ckyvdk2f1kskmfcc7955qf9ki5c49c", - "depends": ["arrangements", "dplyr", "MASS"] + "depends": ["MASS", "arrangements", "dplyr"] }, "CARME": { "name": "CARME", "version": "0.1.1", "sha256": "0nam14g052swb44sw07as4agk0z47f7mc1kqlj0z9m1ywsbisnpl", - "depends": ["BH", "expm", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "expm", "rstan", "rstantools"] }, "CARMS": { "name": "CARMS", "version": "1.0.1", "sha256": "0w7xhvwvn5vsc0w9fn3mh750lfqh5183ads1ihv7ypdhdywb5c0p", - "depends": ["diagram", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "diagram"] }, "CARRoT": { "name": "CARRoT", "version": "3.0.2", "sha256": "1himmzsshhr2f5hljr60p7w3wq5ybdsb0f9kiga56hpppg352l3f", - "depends": ["doParallel", "foreach", "nnet", "Rdpack"] - }, - "CARlasso": { - "name": "CARlasso", - "version": "0.1.2", - "sha256": "05r5n5bh0fpwfigr6czh9pg29zyrw73idfvs9qm8vr3dvcmvc42r", - "depends": ["coda", "ggplot2", "ggraph", "igraph", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["Rdpack", "doParallel", "foreach", "nnet"] }, "CASCORE": { "name": "CASCORE", @@ -3917,13 +3965,13 @@ "name": "CASMI", "version": "1.2.2", "sha256": "1xj2d2p75hf6ypz57vbkrlcmf1gk52pv1fadyv9d40lzy8rc3667", - "depends": ["entropy", "EntropyEstimation"] + "depends": ["EntropyEstimation", "entropy"] }, "CAST": { "name": "CAST", "version": "1.0.2", "sha256": "1ga9j2c17gp14hgjd5wa8liak1m0qnhp27hl0r1iqk3gkxq3z5c9", - "depends": ["caret", "data_table", "FNN", "forcats", "ggplot2", "plyr", "sf", "sp", "terra", "twosamples", "zoo"] + "depends": ["FNN", "caret", "data_table", "forcats", "ggplot2", "plyr", "sf", "sp", "terra", "twosamples", "zoo"] }, "CATT": { "name": "CATT", @@ -3941,7 +3989,7 @@ "name": "CAinterprTools", "version": "1.1.0", "sha256": "07rvi91ysqyfwagmip0cnqjahv1n8slicd5hznqf5v3l841xh7p7", - "depends": ["ca", "classInt", "cluster", "FactoMineR", "ggplot2", "ggrepel", "Hmisc", "RcmdrMisc", "reshape2"] + "depends": ["FactoMineR", "Hmisc", "RcmdrMisc", "ca", "classInt", "cluster", "ggplot2", "ggrepel", "reshape2"] }, "CAvariants": { "name": "CAvariants", @@ -3953,7 +4001,7 @@ "name": "CB2", "version": "1.3.4", "sha256": "0431bd956hmkrhs9x845vjwbzzwzd7n9nfx9y95mv6qv84zd4wv2", - "depends": ["dplyr", "ggplot2", "glue", "magrittr", "metap", "pheatmap", "R_utils", "Rcpp", "RcppArmadillo", "readr", "stringr", "tibble", "tidyr"] + "depends": ["R_utils", "Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "glue", "magrittr", "metap", "pheatmap", "readr", "stringr", "tibble", "tidyr"] }, "CBCgrps": { "name": "CBCgrps", @@ -3961,11 +4009,17 @@ "sha256": "0z34vcdq5lp1l15l3a67lpvfla0g0qsb5ijbc9h575h7fpf28jqf", "depends": ["nortest"] }, + "CBPE": { + "name": "CBPE", + "version": "0.1.0", + "sha256": "1l6vs2dq0ckspy9ksdwkds5jyr7a14c34bd9lpx1hnfw3savhhcp", + "depends": [] + }, "CBPS": { "name": "CBPS", "version": "0.23", "sha256": "0bdkx7phi58200jgijqmv5d7v2kiksj07sxx2sjmkd1dcjdy13zd", - "depends": ["glmnet", "MASS", "MatchIt", "nnet", "numDeriv"] + "depends": ["MASS", "MatchIt", "glmnet", "nnet", "numDeriv"] }, "CBSr": { "name": "CBSr", @@ -4013,7 +4067,7 @@ "name": "CCMMR", "version": "0.2", "sha256": "0y1lfjicyw0gs2r5nrqhkzyzkdbs6brdrzgc98k5fam79nj7kcbv", - "depends": ["r2r", "RANN", "Rcpp", "RcppEigen"] + "depends": ["RANN", "Rcpp", "RcppEigen", "r2r"] }, "CCP": { "name": "CCP", @@ -4025,19 +4079,19 @@ "name": "CCTpack", "version": "1.5.2", "sha256": "1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig", - "depends": ["MASS", "mvtnorm", "polycor", "psych", "R2jags", "rjags"] + "depends": ["MASS", "R2jags", "mvtnorm", "polycor", "psych", "rjags"] }, "CCWeights": { "name": "CCWeights", "version": "0.1.6", "sha256": "0in3pl1n48jal6f7kiyw60by11vbga8vr45x0wywghd7dz60ppfv", - "depends": ["bs4Dash", "dplyr", "DT", "fresh", "magrittr", "plotly", "readr", "readxl", "rmarkdown", "shiny"] + "depends": ["DT", "bs4Dash", "dplyr", "fresh", "magrittr", "plotly", "readr", "readxl", "rmarkdown", "shiny"] }, "CDCPLACES": { "name": "CDCPLACES", - "version": "1.1.5", - "sha256": "0q785ryilzqab730vg1ba2q738xxrasyzdq3ckc69dsxjp0cpn3s", - "depends": ["curl", "dplyr", "httr", "httr2", "jsonlite", "sf", "tidyr", "tigris", "usa"] + "version": "1.1.6", + "sha256": "0dhdh5k9wy62285mz2g02rl38r5nzpdhrbsa3l05z30ca459rh08", + "depends": ["curl", "dplyr", "httr", "httr2", "sf", "tidyr", "tigris", "usa", "yyjsonr", "zctaCrosswalk"] }, "CDFt": { "name": "CDFt", @@ -4049,19 +4103,19 @@ "name": "CDGHMM", "version": "0.1.0", "sha256": "18gf8p5h006h125dfygghxbkdbg26p77k632l2plhrpcgd3iszbw", - "depends": ["cluster", "MASS", "mvtnorm", "ramify"] + "depends": ["MASS", "cluster", "mvtnorm", "ramify"] }, "CDM": { "name": "CDM", "version": "8.2-6", "sha256": "1lcq3i5rlyqkc12c26kj0x4fm2gh1jsisp6kbf59y3hjdkiqajhl", - "depends": ["mvtnorm", "polycor", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm", "polycor"] }, "CDMConnector": { "name": "CDMConnector", - "version": "1.4.0", - "sha256": "1b129mm7qpfl57bf2spcr6wkq3ha2mxmacx17lnaln47a0n2nm5y", - "depends": ["checkmate", "cli", "DBI", "dbplyr", "dplyr", "fs", "generics", "glue", "jsonlite", "lifecycle", "omopgenerics", "purrr", "readr", "rlang", "stringi", "stringr", "tidyr", "tidyselect", "waldo", "withr"] + "version": "1.5.0", + "sha256": "1ma5hjldcnsw6h007s1yyzv5iix8z8vz5yfxx5g3z74kwlpa4jjy", + "depends": ["DBI", "checkmate", "cli", "dbplyr", "dplyr", "fs", "generics", "glue", "jsonlite", "lifecycle", "omopgenerics", "purrr", "readr", "rlang", "stringi", "stringr", "tidyr", "tidyselect", "waldo", "withr"] }, "CDSE": { "name": "CDSE", @@ -4085,13 +4139,13 @@ "name": "CDVineCopulaConditional", "version": "0.1.1", "sha256": "1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k", - "depends": ["combinat", "VineCopula"] + "depends": ["VineCopula", "combinat"] }, "CDatanet": { "name": "CDatanet", "version": "2.2.0", "sha256": "1qzfxz72zpxi48djqhypqlmajk6rx91m0i997vsr0zry0dp2zrzb", - "depends": ["ddpcr", "doParallel", "doRNG", "foreach", "Formula", "formula_tools", "Matrix", "matrixcalc", "Rcpp", "RcppArmadillo", "RcppDist", "RcppEigen", "RcppNumerical", "RcppProgress"] + "depends": ["Formula", "Matrix", "Rcpp", "RcppArmadillo", "RcppDist", "RcppEigen", "RcppNumerical", "RcppProgress", "ddpcr", "doParallel", "doRNG", "foreach", "formula_tools", "matrixcalc"] }, "CEC": { "name": "CEC", @@ -4109,13 +4163,13 @@ "name": "CEEMDANML", "version": "0.1.0", "sha256": "0hc5sx1zvxj3j5psgcgzhw6l9zrvbbsnpw6qr7ww82bjjr3wbi3c", - "depends": ["aTSA", "caret", "e1071", "earth", "fGarch", "FinTS", "forecast", "LSTS", "neuralnet", "pso", "Rlibeemd", "tseries"] + "depends": ["FinTS", "LSTS", "Rlibeemd", "aTSA", "caret", "e1071", "earth", "fGarch", "forecast", "neuralnet", "pso", "tseries"] }, "CEGO": { "name": "CEGO", "version": "2.4.3", "sha256": "0pr3mkygnwcaslf0z8np7vhf7y70l9xqbx61bp98my5gq8gfzcxg", - "depends": ["anticlust", "DEoptim", "fastmatch", "MASS", "Matrix", "ParamHelpers", "quadprog"] + "depends": ["DEoptim", "MASS", "Matrix", "ParamHelpers", "anticlust", "fastmatch", "quadprog"] }, "CEOdata": { "name": "CEOdata", @@ -4127,7 +4181,7 @@ "name": "CERFIT", "version": "0.1.0", "sha256": "1mhyn5iyvnqqx881jfvacyxaldvn5q9h1jpsfy14sgkdjf75274s", - "depends": ["CBPS", "glmnet", "partykit", "randomForest", "Rcpp", "RcppArmadillo", "twang"] + "depends": ["CBPS", "Rcpp", "RcppArmadillo", "glmnet", "partykit", "randomForest", "twang"] }, "CEoptim": { "name": "CEoptim", @@ -4145,7 +4199,7 @@ "name": "CFC", "version": "1.2.0", "sha256": "16abn3ydixb819qyyrs351d8v6qaaaz1gif0yfd8gdh7xnr2qzpy", - "depends": ["abind", "doParallel", "foreach", "Rcpp", "RcppArmadillo", "RcppProgress", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "abind", "doParallel", "foreach", "survival"] }, "CFF": { "name": "CFF", @@ -4155,9 +4209,9 @@ }, "CFO": { "name": "CFO", - "version": "1.2.1", - "sha256": "17qjjcyhfn2n9fkbc4dciscr35dnnvv15csh7yw738kzfvybvrvp", - "depends": ["dplyr", "ggplot2", "Iso", "survival"] + "version": "1.3.1", + "sha256": "0zm55sdj8z1lq5aar891pxrvww6dk42sz21i5ij2gk0gis820773", + "depends": ["Iso", "dplyr", "ggplot2", "pbapply", "survival"] }, "CFilt": { "name": "CFilt", @@ -4193,7 +4247,7 @@ "name": "CGNM", "version": "0.9.0", "sha256": "1m2cqwb8q2lirf09d5pmqjan4r1w8m9pkg2wzyr8jp7sg1dqaaw7", - "depends": ["ggplot2", "MASS", "shiny"] + "depends": ["MASS", "ggplot2", "shiny"] }, "CGP": { "name": "CGP", @@ -4263,9 +4317,9 @@ }, "CICA": { "name": "CICA", - "version": "1.0.2", - "sha256": "1z584rdmr5m8sqvymb12fv7i7gc6b9kj3ddl38j2qvjf668zw1dc", - "depends": ["htmltools", "ica", "magrittr", "mclust", "multiway", "neurobase", "oro_nifti", "plotly", "RNifti", "servr"] + "version": "1.1.1", + "sha256": "0kl6hg2vn8w6imvrimwscj2qpgjg3fbvcjv06ax17ilci87zahx6", + "depends": ["RNifti", "Rfast", "htmltools", "ica", "magrittr", "mclust", "multiway", "neurobase", "oro_nifti", "plotly", "servr"] }, "CICI": { "name": "CICI", @@ -4289,7 +4343,7 @@ "name": "CIMTx", "version": "1.2.0", "sha256": "1jx99vh620zqwp7p4bjcxa3n0kg6w6q88kklv9f9x44894mrd56a", - "depends": ["arm", "BART", "cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "Matching", "metR", "mgcv", "nnet", "stringr", "SuperLearner", "tidyr", "tmle", "twang", "WeightIt"] + "depends": ["BART", "Matching", "SuperLearner", "WeightIt", "arm", "cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "metR", "mgcv", "nnet", "stringr", "tidyr", "tmle", "twang"] }, "CINE": { "name": "CINE", @@ -4307,7 +4361,7 @@ "name": "CINNA", "version": "1.2.2", "sha256": "18dyv8llqjjc679l815ahhsq552n5vkcfj9vkv47y9v3zx1g52yl", - "depends": ["centiserve", "circlize", "corrplot", "dendextend", "factoextra", "FactoMineR", "GGally", "ggplot2", "igraph", "intergraph", "network", "pheatmap", "plyr", "Rtsne", "sna", "viridis"] + "depends": ["FactoMineR", "GGally", "Rtsne", "centiserve", "circlize", "corrplot", "dendextend", "factoextra", "ggplot2", "igraph", "intergraph", "network", "pheatmap", "plyr", "sna", "viridis"] }, "CINmetrics": { "name": "CINmetrics", @@ -4325,13 +4379,13 @@ "name": "CIS.DGLM", "version": "0.1.0", "sha256": "0c7jxfb8gaklf6p83152wb2nszm2p806p3n523xajf4ha368d3kq", - "depends": ["dglm", "dplyr", "ggplot2", "RColorBrewer"] + "depends": ["RColorBrewer", "dglm", "dplyr", "ggplot2"] }, "CITAN": { "name": "CITAN", "version": "2022.1.1", "sha256": "09m9f6s9y7ygbixcymg93vsrqz5jsjp968cjhxnj1v73hzalk168", - "depends": ["agop", "DBI", "RSQLite", "stringi"] + "depends": ["DBI", "RSQLite", "agop", "stringi"] }, "CITMIC": { "name": "CITMIC", @@ -4343,7 +4397,7 @@ "name": "CIfinder", "version": "2.0.0", "sha256": "1kgcf82ixv2pic31msxzzaapnas88skk033pifa0sip8pya1by4q", - "depends": ["boot", "kableExtra", "ratesci", "Rdpack"] + "depends": ["Rdpack", "boot", "kableExtra", "ratesci"] }, "CIplot": { "name": "CIplot", @@ -4373,18 +4427,18 @@ "name": "CKLRT", "version": "0.2.3", "sha256": "1d8sg3ncns3fpjaghz1h1z9nfrl31v09xijrzzsias8xjrpi191b", - "depends": ["MASS", "mgcv", "nlme", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Rcpp", "RcppEigen", "mgcv", "nlme"] }, "CKMRpop": { "name": "CKMRpop", "version": "0.1.3", "sha256": "0d4sai2h2cfzh4hbg8yh7wqb459j948j3s0m218d3gcippm22jpb", - "depends": ["dplyr", "ggforce", "ggplot2", "ggraph", "igraph", "magrittr", "purrr", "Rcpp", "readr", "stringr", "tibble", "tidygraph", "tidyr", "vroom"] + "depends": ["Rcpp", "dplyr", "ggforce", "ggplot2", "ggraph", "igraph", "magrittr", "purrr", "readr", "stringr", "tibble", "tidygraph", "tidyr", "vroom"] }, "CLA": { "name": "CLA", - "version": "0.96-2", - "sha256": "0cfa7zm13bin8hx8ki20kaz8fvkwdaiyl0pjghhld8vr5d3289kq", + "version": "0.96-3", + "sha256": "1jrk6zr5x5kypa4zgwdhbnihxgi9bl34xmgqg7rlpsl2v53013mi", "depends": [] }, "CLAST": { @@ -4397,7 +4451,7 @@ "name": "CLME", "version": "2.0-12", "sha256": "161maq22r8wbd6c2dc8b47mh6991vc4iqmjr8g6yqb5gcwca8zhg", - "depends": ["isotone", "lme4", "MASS", "nlme", "openxlsx", "prettyR", "shiny", "stringr"] + "depends": ["MASS", "isotone", "lme4", "nlme", "openxlsx", "prettyR", "shiny", "stringr"] }, "CLONETv2": { "name": "CLONETv2", @@ -4415,13 +4469,13 @@ "name": "CLUSTShiny", "version": "0.1.0", "sha256": "19mh5g1ylvlab4xjxw7girxk9zkpxxczhbfijf11b592hbw0qxqk", - "depends": ["cluster", "dplyr", "klaR", "MASS", "psycho", "rmarkdown", "shiny"] + "depends": ["MASS", "cluster", "dplyr", "klaR", "psycho", "rmarkdown", "shiny"] }, "CLVTools": { "name": "CLVTools", - "version": "0.10.0", - "sha256": "0l6jp6h2c0gcav3mnw9rz1wba7va2261pjjw5r3hqjjg8jrhfp0r", - "depends": ["data_table", "Formula", "ggplot2", "lubridate", "MASS", "Matrix", "optimx", "Rcpp", "RcppArmadillo", "RcppGSL", "testthat"] + "version": "0.11.0", + "sha256": "102r2p8y9pr03gj3s7pn0chy56300gxffmnadm0qfklwl0mlv63g", + "depends": ["Formula", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppGSL", "data_table", "digest", "ggplot2", "lubridate", "numDeriv", "optimx", "testthat"] }, "CLimd": { "name": "CLimd", @@ -4447,11 +4501,17 @@ "sha256": "1n0kf6mby71zccymdl75yw8rafkl9y7kn9j2pipqf15zvbqdl33j", "depends": ["MASS"] }, + "CMGFM": { + "name": "CMGFM", + "version": "1.1", + "sha256": "0km485aajgwb0jyp7fvgz82dw22la659js4d4hg2zbkn562pz4m3", + "depends": ["GFM", "MASS", "Rcpp", "RcppArmadillo", "irlba"] + }, "CMHNPA": { "name": "CMHNPA", "version": "1.1.1", "sha256": "08pjnc2l2ip8x9hbgsp74alrk520an5kq0lxwqh33smfw1frw4ql", - "depends": ["car", "MASS"] + "depends": ["MASS", "car"] }, "CMLS": { "name": "CMLS", @@ -4469,7 +4529,7 @@ "name": "CMShiny", "version": "0.1.0", "sha256": "0ciis3930yhn4dmazsg2yp7wi9hdfj5slr032x8qfllxis7m4k0w", - "depends": ["caret", "e1071", "epitools", "Matrix", "rmarkdown", "shiny", "shinyMatrix"] + "depends": ["Matrix", "caret", "e1071", "epitools", "rmarkdown", "shiny", "shinyMatrix"] }, "CMapViz": { "name": "CMapViz", @@ -4505,7 +4565,7 @@ "name": "CNLTtsa", "version": "0.1-2", "sha256": "1vy0jjg6s8yvsvkx4pin183y5bnikm5cmjcpa9znz9dj1w6hwr5r", - "depends": ["adlift", "CNLTreg", "fields", "nlt"] + "depends": ["CNLTreg", "adlift", "fields", "nlt"] }, "CNPS": { "name": "CNPS", @@ -4517,13 +4577,13 @@ "name": "CNVRG", "version": "1.0.0", "sha256": "0xr2c5yc9g8hqw5dy5k2y0pm54sdrrbafsc3cpafpwaf803vdrbk", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tibble", "vegan"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools", "tibble", "vegan"] }, "CNVScope": { "name": "CNVScope", "version": "3.7.2", "sha256": "03jkivg9jr2dpkf739cba3dsjf56gwvcpq3nqhp42kmmgn50rpiq", - "depends": ["biomaRt", "data_table", "doParallel", "dplyr", "foreach", "GenomicInteractions", "ggplot2", "Hmisc", "jointseg", "magrittr", "Matrix", "matrixStats", "OpenImageR", "plyr", "RCurl", "reshape2", "rtracklayer", "shiny", "stringr", "tidyr"] + "depends": ["GenomicInteractions", "Hmisc", "Matrix", "OpenImageR", "RCurl", "biomaRt", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "jointseg", "magrittr", "matrixStats", "plyr", "reshape2", "rtracklayer", "shiny", "stringr", "tidyr"] }, "CNprep": { "name": "CNprep", @@ -4535,7 +4595,7 @@ "name": "COAP", "version": "1.2", "sha256": "1772aiy9ywvgb1k9qn41l00qhsmhxkx53mdl16ggcwq0c3gdm8ly", - "depends": ["irlba", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "irlba"] }, "COCONUT": { "name": "COCONUT", @@ -4553,7 +4613,7 @@ "name": "COLP", "version": "1.0.0", "sha256": "0259s058rn7fyprma5frx7sdjv4qk9hxijpi9xh7qyz5jzzsi660", - "depends": ["combinat", "MASS"] + "depends": ["MASS", "combinat"] }, "COMBAT": { "name": "COMBAT", @@ -4563,21 +4623,27 @@ }, "COMBO": { "name": "COMBO", - "version": "1.0.0", - "sha256": "12k5lchxdxql3q7si05404f8dc26xjxqf95mq5jykgp9chgl6i5w", - "depends": ["dplyr", "Matrix", "rjags", "SAMBA", "tidyr", "turboEM"] + "version": "1.1.0", + "sha256": "0073cwbggmqgm13nmg8b6lq3gb5qid73nhh0jb0ldmabwn1bw3hk", + "depends": ["Matrix", "SAMBA", "dplyr", "rjags", "tidyr", "turboEM"] }, "COMIX": { "name": "COMIX", "version": "1.0.0", "sha256": "0dhc3zb8jkfq8b9vj8m2a9jbd9fc7xxvhz16l8xhz9v5iffgk6hh", - "depends": ["coda", "dplyr", "ggplot2", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical", "rlang", "stringr", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical", "coda", "dplyr", "ggplot2", "rlang", "stringr", "tidyr"] + }, + "COMMA": { + "name": "COMMA", + "version": "1.0.0", + "sha256": "1yaac6kgx3912l8iac4ybhm9drs7hy5x4wxiyc4w35clkg6r76vc", + "depends": ["Matrix", "turboEM"] }, "COMPoissonReg": { "name": "COMPoissonReg", "version": "0.8.1", "sha256": "0a03v9b3mv214y2ky94z8y363x6b97a68kvypvan56m0mg0zzq3d", - "depends": ["numDeriv", "Rcpp"] + "depends": ["Rcpp", "numDeriv"] }, "CONCUR": { "name": "CONCUR", @@ -4619,13 +4685,13 @@ "name": "COVID19", "version": "3.0.3", "sha256": "0idvqsqdsjm2dn7iipr0mh0xlgxfwavajxbz08wigngcaic192iy", - "depends": ["data_table", "R_utils"] + "depends": ["R_utils", "data_table"] }, "COVIDIBGE": { "name": "COVIDIBGE", "version": "0.2.2", "sha256": "1clbqpaz9awkhsglwbv84j277hh92141sla67dlzrs6j5iv4zkcs", - "depends": ["dplyr", "httr", "magrittr", "projmgr", "RCurl", "readr", "readxl", "survey", "tibble", "timeDate"] + "depends": ["RCurl", "dplyr", "httr", "magrittr", "projmgr", "readr", "readxl", "survey", "tibble", "timeDate"] }, "CP": { "name": "CP", @@ -4637,19 +4703,25 @@ "name": "CPAT", "version": "0.1.0", "sha256": "0zygncwww3cazwmx06bhzq0g41xcqfpw307azdhygc8jmcy6qj71", - "depends": ["purrr", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "purrr"] }, "CPBayes": { "name": "CPBayes", "version": "1.1.0", "sha256": "1kw0r8spqm0s7cb3w5gplw67mhfmcbbf3ligngbary77ghkzirnb", - "depends": ["forestplot", "MASS", "mvtnorm", "purrr"] + "depends": ["MASS", "forestplot", "mvtnorm", "purrr"] }, "CPC": { "name": "CPC", "version": "2.6.0", "sha256": "0n1vsn7b1rllbsad2bshhi0c6pz7zqz6bmcc176qh50hm4hgp99r", - "depends": ["cluster", "dbscan", "Rfast"] + "depends": ["Rfast", "cluster", "dbscan"] + }, + "CPCAT": { + "name": "CPCAT", + "version": "1.0.0", + "sha256": "0vi98pxpmrrkz15rn1b4kcs7x1fbkili10qw2p4ins7lrjvqjvdp", + "depends": [] }, "CPE": { "name": "CPE", @@ -4681,6 +4753,12 @@ "sha256": "1kdf43pnavjbmxkvrj78fiwl0ykln9x9ck8pcivhj9q5rsfbhbh4", "depends": ["ineq", "kappalab", "mc2d"] }, + "CPoptim": { + "name": "CPoptim", + "version": "0.1.0", + "sha256": "1i0rlv7k6mhh71hya5nc2xbk7061jghgcnlgdwiqb3zag709pf8c", + "depends": [] + }, "CPsurv": { "name": "CPsurv", "version": "1.0.0", @@ -4691,7 +4769,7 @@ "name": "CR2", "version": "0.2.1", "sha256": "1j9wkpfr6bk07sj1swcjih12qz0cin811k69ihizsi4190m5f49k", - "depends": ["broom", "dplyr", "generics", "lme4", "magrittr", "Matrix", "nlme", "performance", "tibble"] + "depends": ["Matrix", "broom", "dplyr", "generics", "lme4", "magrittr", "nlme", "performance", "tibble"] }, "CRABS": { "name": "CRABS", @@ -4703,13 +4781,13 @@ "name": "CRANsearcher", "version": "1.0.0", "sha256": "09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl", - "depends": ["curl", "dplyr", "DT", "lubridate", "miniUI", "shiny", "shinyjs", "stringr"] + "depends": ["DT", "curl", "dplyr", "lubridate", "miniUI", "shiny", "shinyjs", "stringr"] }, "CRE": { "name": "CRE", "version": "0.2.6", "sha256": "19clbz7x4sf8jxj0s77ym9k1k5hgd64myvvn5f3m6pxpnx7hskhl", - "depends": ["arules", "bartCause", "data_table", "gbm", "ggplot2", "glmnet", "logger", "magrittr", "MASS", "randomForest", "RRF", "stabs", "stringr", "SuperLearner", "xgboost", "xtable"] + "depends": ["MASS", "RRF", "SuperLearner", "arules", "bartCause", "data_table", "gbm", "ggplot2", "glmnet", "logger", "magrittr", "randomForest", "stabs", "stringr", "xgboost", "xtable"] }, "CREAM": { "name": "CREAM", @@ -4739,13 +4817,13 @@ "name": "CRMetrics", "version": "0.3.0", "sha256": "1abrbkhhn5s3h4dam2pgmvqpqw0bpqzhj0521p7v48gsyfg224bw", - "depends": ["cowplot", "dplyr", "ggbeeswarm", "ggplot2", "ggpmisc", "ggpubr", "ggrepel", "magrittr", "Matrix", "R6", "scales", "sccore", "sparseMatrixStats", "tibble", "tidyr"] + "depends": ["Matrix", "R6", "cowplot", "dplyr", "ggbeeswarm", "ggplot2", "ggpmisc", "ggpubr", "ggrepel", "magrittr", "scales", "sccore", "sparseMatrixStats", "tibble", "tidyr"] }, "CRTConjoint": { "name": "CRTConjoint", "version": "0.1.0", "sha256": "1lp3rxjd8pilin6kvl49vm11bjd6dzhalmwf99j3jsiiavxc6baq", - "depends": ["doSNOW", "foreach", "Rcpp", "snow"] + "depends": ["Rcpp", "doSNOW", "foreach", "snow"] }, "CRTSize": { "name": "CRTSize", @@ -4757,13 +4835,13 @@ "name": "CRTgeeDR", "version": "2.0.1", "sha256": "0sqsgs8qbc6gvzr3l2r8y83nbhz12q3jf2cjlb2xgif15r7sbnxx", - "depends": ["ggplot2", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "ggplot2"] }, "CRTspat": { "name": "CRTspat", - "version": "1.2.0", - "sha256": "1qhb4kzdq588hvd05dz9np4zhdbbp77d6ihjkkn1x1niz61n5bmp", - "depends": ["dplyr", "geepack", "ggplot2", "jagsUI", "lme4", "magrittr", "MASS", "Matrix", "OOR", "sf", "spatstat_geom", "spatstat_random", "tidyr", "TSP"] + "version": "1.3.0", + "sha256": "0n60i8fx28mfgmzb33jz7nngrdhx8sj5lv3jl49h0xd80x7d9csb", + "depends": ["MASS", "Matrix", "OOR", "TSP", "dplyr", "geepack", "ggplot2", "jagsUI", "lme4", "magrittr", "sf", "spatstat_geom", "spatstat_random", "tidyr"] }, "CRWRM": { "name": "CRWRM", @@ -4797,27 +4875,27 @@ }, "CSHShydRology": { "name": "CSHShydRology", - "version": "1.4.0", - "sha256": "06hdqdzvfpfn4r6x1d2m24lz2w5sj20fr7d791zqzd16mp767qcc", - "depends": ["circular", "dplyr", "fields", "ggplot2", "ggspatial", "httr", "Kendall", "lubridate", "magrittr", "OpenStreetMap", "plotrix", "raster", "rnaturalearth", "sf", "stringr", "tidyhydat", "timeDate", "whitebox"] + "version": "1.4.2", + "sha256": "0f90k32ngfkb7cp9s79h50qmxxxggkkm8a72diz9981wz6n3zjaa", + "depends": ["Kendall", "circular", "dplyr", "fields", "ggplot2", "ggspatial", "httr", "lubridate", "magrittr", "plotrix", "raster", "sf", "stringr", "tidyhydat", "timeDate", "whitebox"] }, "CSIndicators": { "name": "CSIndicators", "version": "1.1.1", "sha256": "062v23vm2yz0dr2s0d6p7iwccdkgywn8k9gfp4jc8kr56ff3hvvr", - "depends": ["ClimProjDiags", "CSTools", "lmom", "lmomco", "multiApply", "s2dv", "SPEI", "zoo"] + "depends": ["CSTools", "ClimProjDiags", "SPEI", "lmom", "lmomco", "multiApply", "s2dv", "zoo"] }, "CSMES": { "name": "CSMES", "version": "1.0.1", "sha256": "1p8wsl9h1f44a7kkj660h1k1v26pp6q1h13rw9l6pikniwdks84c", - "depends": ["caTools", "data_table", "mco", "ROCR", "rpart", "zoo"] + "depends": ["ROCR", "caTools", "data_table", "mco", "rpart", "zoo"] }, "CSTools": { "name": "CSTools", "version": "5.2.0", "sha256": "0yyzc76x45pf3r84jdpxj2zplibf6zb1q3gb8jv5ncpcw3s9i3c9", - "depends": ["abind", "ClimProjDiags", "data_table", "easyNCDF", "easyVerification", "ggplot2", "lubridate", "maps", "multiApply", "ncdf4", "plyr", "qmap", "rainfarmr", "RColorBrewer", "reshape2", "s2dv", "scales", "startR", "verification"] + "depends": ["ClimProjDiags", "RColorBrewer", "abind", "data_table", "easyNCDF", "easyVerification", "ggplot2", "lubridate", "maps", "multiApply", "ncdf4", "plyr", "qmap", "rainfarmr", "reshape2", "s2dv", "scales", "startR", "verification"] }, "CSclone": { "name": "CSclone", @@ -4839,8 +4917,8 @@ }, "CTD": { "name": "CTD", - "version": "1.2", - "sha256": "1zigym3cy5p3wgw2b2rji72qgy4fmpcscc9281x5m5qndsl5gyy5", + "version": "1.3", + "sha256": "0wvz1b7dyypamaxr1zp836sxj2a9xi8yp8lnbbsjp8djpzvcv7gm", "depends": ["igraph"] }, "CTM": { @@ -4895,7 +4973,7 @@ "name": "CUFF", "version": "1.9", "sha256": "1fhxqnymcam845h8jlwp4al68rm9ajllmpnmarbh48c0vhcziaj8", - "depends": ["clipr", "dplyr", "DT", "haven", "lmerTest", "nlme", "openxlsx", "xtable"] + "depends": ["DT", "clipr", "dplyr", "haven", "lmerTest", "nlme", "openxlsx", "xtable"] }, "CUMP": { "name": "CUMP", @@ -4925,7 +5003,7 @@ "name": "CVST", "version": "0.2-3", "sha256": "0bgk0d6w3dyhb5s30idnp6jpb3m8wf3b79wqlg127wwm0cird8pg", - "depends": ["kernlab", "Matrix"] + "depends": ["Matrix", "kernlab"] }, "CVThresh": { "name": "CVThresh", @@ -4935,9 +5013,9 @@ }, "CVXR": { "name": "CVXR", - "version": "1.0-13", - "sha256": "0nl7hc7scc6grn7c3mbnn0r65pd2yd27gvs0d2xh8ban19smr2c1", - "depends": ["bit64", "ECOSolveR", "gmp", "Matrix", "osqp", "R6", "Rcpp", "RcppEigen", "Rmpfr", "scs"] + "version": "1.0-14", + "sha256": "1nvwym5fwkyqkw8dpar571kr5695w7yrih6w9vnhswikp717q0jd", + "depends": ["ECOSolveR", "Matrix", "R6", "Rcpp", "RcppEigen", "Rmpfr", "bit64", "clarabel", "gmp", "osqp", "scs"] }, "CVglasso": { "name": "CVglasso", @@ -4953,9 +5031,9 @@ }, "CWT": { "name": "CWT", - "version": "0.1.1", - "sha256": "1afa94694fyqm947ncp96sxf7wyn095a66hyw8xharb30jf1b6q7", - "depends": ["data_table", "Rcpp", "RcppArmadillo"] + "version": "0.2.1", + "sha256": "0xwvzbz81j5mqkzhb0qc1srm5k9ygnl81nbq5xp9rc4yfa4yw2wq", + "depends": ["Rcpp", "RcppArmadillo", "data_table"] }, "CaDENCE": { "name": "CaDENCE", @@ -4965,9 +5043,9 @@ }, "CaPO4Sim": { "name": "CaPO4Sim", - "version": "0.2.0", - "sha256": "0s4mqlas41ll656hj1imzqydgwgw002d469z01fjdcs4d6daljw6", - "depends": ["DT", "htmltools", "magrittr", "plotly", "purrr", "rintrojs", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjqui", "shinyjs", "shinyWidgets", "visNetwork"] + "version": "0.2.1", + "sha256": "1dnaskasjzhsvnxqfgww2nwy8ccciilgn1kd7jjj3mx9ksc2wnhr", + "depends": ["DT", "magrittr", "plotly", "purrr", "rintrojs", "shiny", "shinyWidgets", "shinycssloaders", "shinyjqui", "shinyjs", "visNetwork"] }, "Cairo": { "name": "Cairo", @@ -4985,7 +5063,7 @@ "name": "CalcThemAll.PRM", "version": "1.1.1", "sha256": "1jm2b4sy1vhzsr2hhl219h65yzx30n7pl0h3w1v3fmfd0hamd1s8", - "depends": ["dplyr", "DT", "lubridate", "magrittr", "MASS", "plotly", "VGAM", "zoo"] + "depends": ["DT", "MASS", "VGAM", "dplyr", "lubridate", "magrittr", "plotly", "zoo"] }, "Calculator_LR_FNs": { "name": "Calculator.LR.FNs", @@ -5007,15 +5085,15 @@ }, "CalibrationCurves": { "name": "CalibrationCurves", - "version": "2.0.1", - "sha256": "0clpmvkh77sjg7f66fgsc3crrimqslw1b8ymv6bq66yc5yp6kqfh", - "depends": ["bookdown", "ggplot2", "Hmisc", "rms", "survival"] + "version": "2.0.3", + "sha256": "102kpgjfasyyrfpxrv1mzrl40fhh6blml6lbiha4s6p0fav7dj8n", + "depends": ["Hmisc", "bookdown", "ggplot2", "rms", "rstudioapi", "survival"] }, "CamelUp": { "name": "CamelUp", "version": "2.0.3", "sha256": "1d3ywb4bxnn149api6lqry8q9lasng79hzka9ndr5cv38pkbvva9", - "depends": ["data_table", "dplyr", "ggplot2", "magrittr", "Rcpp", "shiny"] + "depends": ["Rcpp", "data_table", "dplyr", "ggplot2", "magrittr", "shiny"] }, "CancerEvolutionVisualization": { "name": "CancerEvolutionVisualization", @@ -5033,7 +5111,7 @@ "name": "Canek", "version": "0.2.5", "sha256": "1irzdhqgzn6kz79f80ri1iv8zlg8ik95bqcllj14ycma1c1mwzsy", - "depends": ["bluster", "FNN", "fpc", "igraph", "irlba", "matrixStats", "numbers"] + "depends": ["FNN", "bluster", "fpc", "igraph", "irlba", "matrixStats", "numbers"] }, "Canopy": { "name": "Canopy", @@ -5057,7 +5135,7 @@ "name": "Cascade", "version": "2.1", "sha256": "1hfbv9129rnrjqspjd8wnhw0qrp1m142bixlwddzr6j2sg7r8s20", - "depends": ["abind", "animation", "cluster", "igraph", "lars", "lattice", "limma", "magic", "nnls", "survival", "tnet", "VGAM"] + "depends": ["VGAM", "abind", "animation", "cluster", "igraph", "lars", "lattice", "limma", "magic", "nnls", "survival", "tnet"] }, "CascadeData": { "name": "CascadeData", @@ -5069,7 +5147,7 @@ "name": "CaseBasedReasoning", "version": "0.3", "sha256": "0ayckjq53lmdm429bvb4fjsbyy7cp3jgds30swmzq9qf75bnaa55", - "depends": ["cowplot", "dplyr", "ggplot2", "pryr", "purrr", "R6", "ranger", "Rcpp", "RcppArmadillo", "RcppParallel", "rms", "survival", "tidyr"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "RcppParallel", "cowplot", "dplyr", "ggplot2", "pryr", "purrr", "ranger", "rms", "survival", "tidyr"] }, "CaseCohortCoxSurvival": { "name": "CaseCohortCoxSurvival", @@ -5093,7 +5171,7 @@ "name": "CatEncoders", "version": "0.1.1", "sha256": "1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl", - "depends": ["data_table", "Matrix"] + "depends": ["Matrix", "data_table"] }, "CatPredi": { "name": "CatPredi", @@ -5123,7 +5201,7 @@ "name": "CausCor", "version": "0.1.3", "sha256": "0hqzzy6wmxws90q4p7d2k0781zmkqq344l352zj9lcqh23ci4p8i", - "depends": ["cowplot", "dplyr", "ggplot2", "magrittr", "WriteXLS"] + "depends": ["WriteXLS", "cowplot", "dplyr", "ggplot2", "magrittr"] }, "CausalGAM": { "name": "CausalGAM", @@ -5133,27 +5211,27 @@ }, "CausalGPS": { "name": "CausalGPS", - "version": "0.4.2", - "sha256": "146nszscdlm59ba7j90bbhj689x2hba7w2ywr2kpd5x5bhw8jagp", - "depends": ["cowplot", "data_table", "Ecume", "gam", "ggplot2", "gnm", "KernSmooth", "locpol", "logger", "MASS", "polycor", "Rcpp", "rlang", "SuperLearner", "wCorr", "xgboost"] + "version": "0.5.0", + "sha256": "0hb010hsqn3ahsp3kqmn4r1qa3y3znz7kc7j8pv9zdx2cpyrnmi4", + "depends": ["Ecume", "KernSmooth", "MASS", "Rcpp", "SuperLearner", "cowplot", "data_table", "gam", "ggplot2", "gnm", "locpol", "logger", "polycor", "rlang", "wCorr", "xgboost"] }, "CausalImpact": { "name": "CausalImpact", "version": "1.3.0", "sha256": "0h3sh35962vdph72svfdvk6b1gl7wnj2kfkkpcjldbiszlfxp7wx", - "depends": ["assertthat", "Boom", "bsts", "ggplot2", "zoo"] + "depends": ["Boom", "assertthat", "bsts", "ggplot2", "zoo"] }, "CausalMBSTS": { "name": "CausalMBSTS", "version": "0.1.1", "sha256": "1mjw2zyddkci6vkbyz3d94l5z1aj3rc2w6lag5igbfv4q0n5qcrp", - "depends": ["CholWishart", "forecast", "KFAS", "MASS", "Matrix", "MixMatrix"] + "depends": ["CholWishart", "KFAS", "MASS", "Matrix", "MixMatrix", "forecast"] }, "CausalMetaR": { "name": "CausalMetaR", "version": "0.1.2", "sha256": "03y973ph52qxh9kyiybrvgrk5b1kd6i1lynkmmmv40vbnx59fs7y", - "depends": ["glmnet", "metafor", "nnet", "progress", "SuperLearner"] + "depends": ["SuperLearner", "glmnet", "metafor", "nnet", "progress"] }, "CausalModels": { "name": "CausalModels", @@ -5165,7 +5243,7 @@ "name": "CausalQueries", "version": "1.1.1", "sha256": "0bivanhgimfnw1dn16ggyj6yjjq1j3jv05xwixqcg96zdnw5va4z", - "depends": ["BH", "dagitty", "dirmult", "dplyr", "ggdag", "ggplot2", "knitr", "latex2exp", "lifecycle", "Rcpp", "RcppArmadillo", "RcppEigen", "rlang", "rstan", "rstantools", "StanHeaders", "stringr"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "RcppEigen", "StanHeaders", "dagitty", "dirmult", "dplyr", "ggdag", "ggplot2", "knitr", "latex2exp", "lifecycle", "rlang", "rstan", "rstantools", "stringr"] }, "CautiousLearning": { "name": "CautiousLearning", @@ -5177,7 +5255,7 @@ "name": "CePa", "version": "0.8.0", "sha256": "1wjm6nyjaz3z0g2dxk1k82va86qxx2xsgx02y9ipyzf1ldxclm1s", - "depends": ["graph", "igraph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph", "igraph"] }, "CeRNASeek": { "name": "CeRNASeek", @@ -5189,19 +5267,19 @@ "name": "CenBAR", "version": "0.1.1", "sha256": "1k8ycm2rzwadr5bg6m0ay81c5v4wjg04yigch6a1w7g75gw01q50", - "depends": ["cvTools", "foreach", "glmnet", "MASS", "mvtnorm", "survival"] + "depends": ["MASS", "cvTools", "foreach", "glmnet", "mvtnorm", "survival"] }, "CensMFM": { "name": "CensMFM", "version": "3.1", "sha256": "00z425r6ijs8zgmw0srcia9v90m57y2aq8zrlspgc5qf8kzxq1iv", - "depends": ["ggplot2", "gridExtra", "MomTrunc", "mvtnorm", "tlrmvnmvt"] + "depends": ["MomTrunc", "ggplot2", "gridExtra", "mvtnorm", "tlrmvnmvt"] }, "CensSpatial": { "name": "CensSpatial", "version": "3.6", "sha256": "10jgr9zvdvm8fgh0llfsxjkd5f565i1qh00zrqxz55is7p4r3h35", - "depends": ["geoR", "lattice", "moments", "msm", "mvtnorm", "numDeriv", "optimx", "psych", "raster", "Rcpp", "tlrmvnmvt", "tmvtnorm"] + "depends": ["Rcpp", "geoR", "lattice", "moments", "msm", "mvtnorm", "numDeriv", "optimx", "psych", "raster", "tlrmvnmvt", "tmvtnorm"] }, "Census2016": { "name": "Census2016", @@ -5211,8 +5289,8 @@ }, "CerioliOutlierDetection": { "name": "CerioliOutlierDetection", - "version": "1.1.13", - "sha256": "1m1mj5cf0sfdfci05ayc86wfx3cj12dfn98pi7cqxcf5nbn3h3n5", + "version": "1.1.15", + "sha256": "1ngwq99q5xi3n06df36dhbgdpjdldfzsi70vhplwlha9cihd71k2", "depends": ["robustbase"] }, "Certara_NLME8": { @@ -5225,13 +5303,19 @@ "name": "Certara.R", "version": "1.1.0", "sha256": "07k7dj37zywkfbrx85gnl6cvc0a0n1xyvmac0lg74nzqb6qb3i1z", - "depends": ["batchtools", "data_table", "dplyr", "DT", "ggplot2", "htmltools", "jsonlite", "magrittr", "plotly", "remotes", "reshape", "rlang", "shiny", "shinyjqui", "shinyjs", "shinymaterial", "shinyWidgets", "sortable", "ssh", "xml2"] + "depends": ["DT", "batchtools", "data_table", "dplyr", "ggplot2", "htmltools", "jsonlite", "magrittr", "plotly", "remotes", "reshape", "rlang", "shiny", "shinyWidgets", "shinyjqui", "shinyjs", "shinymaterial", "sortable", "ssh", "xml2"] }, "ChainLadder": { "name": "ChainLadder", - "version": "0.2.18", - "sha256": "0q0ycwswi1hxcv1apq40kzb91sgzbwb84nynd84750r449hbwrif", - "depends": ["actuar", "cplm", "ggplot2", "lattice", "MASS", "Matrix", "statmod", "systemfit", "tweedie"] + "version": "0.2.19", + "sha256": "0i5mif26m4kdii7rx7dvsk98d53qyrzdd2x7x9idqsrs7cl5srm9", + "depends": ["MASS", "Matrix", "actuar", "cplm", "ggplot2", "lattice", "statmod", "systemfit", "tweedie"] + }, + "ChangePointTaylor": { + "name": "ChangePointTaylor", + "version": "0.3", + "sha256": "17gyiwvg41zc31kmhv55037dm416vwlkrmrwswilbqksqq1fzk06", + "depends": ["Rcpp", "dplyr", "magrittr", "purrr", "rlang", "tidyr"] }, "ChangepointTesting": { "name": "ChangepointTesting", @@ -5261,7 +5345,7 @@ "name": "ChaosGame", "version": "1.4", "sha256": "06d2jm8b3l242yqgbfsr1cclph0l8xdxqfq7xvbghsavzk3lf367", - "depends": ["colorRamps", "ggplot2", "gridExtra", "plot3D", "RColorBrewer", "rgl"] + "depends": ["RColorBrewer", "colorRamps", "ggplot2", "gridExtra", "plot3D", "rgl"] }, "CheckDigit": { "name": "CheckDigit", @@ -5351,19 +5435,19 @@ "name": "CircSpaceTime", "version": "0.9.0", "sha256": "0dplgm5x4c1xxnv6062n643mn5zh0najw3f41pv2qafc1lil4wx8", - "depends": ["circular", "coda", "ggplot2", "Rcpp", "RcppArmadillo", "RInside"] + "depends": ["RInside", "Rcpp", "RcppArmadillo", "circular", "coda", "ggplot2"] }, "CircStats": { "name": "CircStats", "version": "0.2-6", "sha256": "07bg4zrs2iqh0pmi44pybi8hlvnxwcaa5zpg85rmf55kflxxkzlf", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "CirceR": { "name": "CirceR", "version": "1.3.3", "sha256": "19pkj9qg6sfyxqvlwssfyr91024arbg74pl332g19917538n346q", - "depends": ["rJava", "RJSONIO"] + "depends": ["RJSONIO", "rJava"] }, "CirclesIntersections": { "name": "CirclesIntersections", @@ -5409,8 +5493,8 @@ }, "ClassComparison": { "name": "ClassComparison", - "version": "3.1.8", - "sha256": "0fd5s4697pvj295fzvvn5mislf42wfzrcvks17v98388rph586gl", + "version": "3.3.2", + "sha256": "0lyc437cmf5yv6ikfcvqdi21z8f2pa60z0czf0cig1w1n65x3lw1", "depends": ["Biobase", "oompaBase"] }, "ClassDiscovery": { @@ -5447,7 +5531,7 @@ "name": "ClickHouseHTTP", "version": "0.3.3", "sha256": "0k8rl7vf4dd2jp8xk03v007mrmjz5w4lbgagmsylv73lm35485zh", - "depends": ["arrow", "data_table", "DBI", "httr", "jsonlite"] + "depends": ["DBI", "arrow", "data_table", "httr", "jsonlite"] }, "CliftLRD": { "name": "CliftLRD", @@ -5465,24 +5549,24 @@ "name": "ClimInd", "version": "0.1-3", "sha256": "0n5kd001nkpks16c3msvn2qvzyrjawa2rqwh8zph2qr5hgpwcpg7", - "depends": ["chron", "SPEI", "weathermetrics"] + "depends": ["SPEI", "chron", "weathermetrics"] }, "ClimMobTools": { "name": "ClimMobTools", "version": "1.2", "sha256": "1kx1hkyn96bhw237hvzrkr1hc8nf02p90lz9gg0rzcjx0zhks4s7", - "depends": ["httr", "jsonlite", "lpSolve", "Matrix", "RSpectra"] + "depends": ["Matrix", "RSpectra", "httr", "jsonlite", "lpSolve"] }, "ClimProjDiags": { "name": "ClimProjDiags", "version": "0.3.3", "sha256": "039rnjpsbq90x6h9snz9iy37bwhapcmw9v98ngh82bsh19h8hwb1", - "depends": ["multiApply", "PCICt"] + "depends": ["PCICt", "multiApply"] }, "ClinSigMeasures": { "name": "ClinSigMeasures", - "version": "1.1", - "sha256": "0dm2shknf83d6wmmjqly1493g30qm68sizj2n5jcc8gwi3xfcs9z", + "version": "1.2", + "sha256": "0vyn1j4qfxgh65jrq7wmm8nfw78vqllmrsdbzspl7hgf5zh477k1", "depends": [] }, "ClinicalTrialSummary": { @@ -5501,7 +5585,7 @@ "name": "CliquePercolation", "version": "0.4.0", "sha256": "17m8pj8wg2ngzip1ag3jm5fqi083ilrsi0rvpcg5jmqflwlka8h3", - "depends": ["colorspace", "igraph", "lessR", "magrittr", "Matrix", "ohenery", "pbapply", "Polychrome", "qgraph"] + "depends": ["Matrix", "Polychrome", "colorspace", "igraph", "lessR", "magrittr", "ohenery", "pbapply", "qgraph"] }, "CloneSeeker": { "name": "CloneSeeker", @@ -5513,7 +5597,7 @@ "name": "CluMP", "version": "0.8.1", "sha256": "1vpxl2rcknqx32b94b48iirkh7r7cdri9mcljrw29gsbvhrfc46k", - "depends": ["amap", "data_table", "dplyr", "ggplot2", "MASS", "NbClust", "rlang", "tableone"] + "depends": ["MASS", "NbClust", "amap", "data_table", "dplyr", "ggplot2", "rlang", "tableone"] }, "ClueR": { "name": "ClueR", @@ -5523,27 +5607,27 @@ }, "ClusBoot": { "name": "ClusBoot", - "version": "1.2.1", - "sha256": "03xch4s8xlvl17vbpm3jk0a6faa57hq0amyg91d9kjr4d6bb4km1", + "version": "1.2.2", + "sha256": "08b3mw4r20z6d6d7w0rmzsz3f11icpzmca5fv7p1mk1m0l1nckfw", "depends": [] }, "ClusPred": { "name": "ClusPred", "version": "1.1.0", "sha256": "12pm5vkfxpaincv9ajid0p07l0mjc2kfqqfg0ls2pcxmmkh8wwb4", - "depends": ["ald", "ALDqr", "quantreg", "Rcpp", "RcppArmadillo", "VGAM"] + "depends": ["ALDqr", "Rcpp", "RcppArmadillo", "VGAM", "ald", "quantreg"] }, "ClusROC": { "name": "ClusROC", "version": "1.0.2", "sha256": "055ppcnzwkapnyf9xvld4bvkccwf494gqcb2qq0vnsa8n6bz5k46", - "depends": ["doParallel", "ellipse", "foreach", "ggplot2", "ggpubr", "iterators", "nlme", "numDeriv", "Rcpp", "RcppArmadillo", "rgl"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "ellipse", "foreach", "ggplot2", "ggpubr", "iterators", "nlme", "numDeriv", "rgl"] }, "ClusTCR2": { "name": "ClusTCR2", "version": "1.7.3.01", "sha256": "1l54x7b9pkkmrdhry41qikyhhnsr2s669jdqmviskjljk9wyyyqi", - "depends": ["DescTools", "ggplot2", "ggseqlogo", "network", "plyr", "RColorBrewer", "scales", "sna", "stringr", "VLF"] + "depends": ["DescTools", "RColorBrewer", "VLF", "ggplot2", "ggseqlogo", "network", "plyr", "scales", "sna", "stringr"] }, "ClusTorus": { "name": "ClusTorus", @@ -5555,19 +5639,19 @@ "name": "ClusVis", "version": "1.2.0", "sha256": "06yckdl3gxjia1gjjqpc29lvy4f7qf47fncslng9ggjnks6il145", - "depends": ["MASS", "mgcv", "mvtnorm", "Rcpp", "RcppArmadillo", "Rmixmod", "VarSelLCM"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rmixmod", "VarSelLCM", "mgcv", "mvtnorm"] }, "ClussCluster": { "name": "ClussCluster", "version": "0.1.0", "sha256": "1436849m2mnm8j7lf653zv8lcvvg2ch8kkks4bvr39kx21wxy8ss", - "depends": ["ggplot2", "reshape2", "rlang", "scales", "VennDiagram"] + "depends": ["VennDiagram", "ggplot2", "reshape2", "rlang", "scales"] }, "ClustAssess": { "name": "ClustAssess", "version": "0.3.0", "sha256": "0b8p5dpb843rv8q1hsc74zhxyn9wjgdxwpwrbq2yx4jmy8v65gzq", - "depends": ["doParallel", "dplyr", "fastcluster", "foreach", "ggplot2", "igraph", "irlba", "magrittr", "Matrix", "progress", "Rcpp", "reshape2", "rlang", "stringr", "uwot"] + "depends": ["Matrix", "Rcpp", "doParallel", "dplyr", "fastcluster", "foreach", "ggplot2", "igraph", "irlba", "magrittr", "progress", "reshape2", "rlang", "stringr", "uwot"] }, "ClustBlock": { "name": "ClustBlock", @@ -5597,13 +5681,13 @@ "name": "ClustVarLV", "version": "2.1.1", "sha256": "0maylgf6czlll5zn3xj68acmllxi4x2r4ri6bdx8vl9apzax1rgy", - "depends": ["doParallel", "foreach", "iterators", "plyr", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "doParallel", "foreach", "iterators", "plyr"] }, "Cluster_OBeu": { "name": "Cluster.OBeu", "version": "1.2.3", "sha256": "10i7mnaq968my1c5hi8bdsj05m64wlmrf4n4m118is5h1q7zss8r", - "depends": ["car", "cluster", "clValid", "data_tree", "dendextend", "jsonlite", "mclust", "RCurl", "reshape", "reshape2", "stringr"] + "depends": ["RCurl", "car", "clValid", "cluster", "data_tree", "dendextend", "jsonlite", "mclust", "reshape", "reshape2", "stringr"] }, "ClusterBootstrap": { "name": "ClusterBootstrap", @@ -5613,9 +5697,9 @@ }, "ClusterR": { "name": "ClusterR", - "version": "1.3.2", - "sha256": "1bs1sl3yy90zx4ni0lhvdivzfas6i4v9203m59njvk5df9x82ffp", - "depends": ["ggplot2", "gmp", "lifecycle", "Rcpp", "RcppArmadillo"] + "version": "1.3.3", + "sha256": "0vmj0q6sjh8adr22mhm6hyfnzsw09dk1qn75rz5i3mmhrd7y7mr6", + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gmp", "lifecycle"] }, "ClusterRankTest": { "name": "ClusterRankTest", @@ -5627,13 +5711,13 @@ "name": "ClusterStability", "version": "1.0.4", "sha256": "1y88dv7n2cxm5w9pbg36dvx55nzvsnq4vbmx401147xr5p03yk9w", - "depends": ["cluster", "copula", "Rcpp", "WeightedCluster"] + "depends": ["Rcpp", "WeightedCluster", "cluster", "copula"] }, "ClusterVAR": { "name": "ClusterVAR", - "version": "0.0.6", - "sha256": "03iwwy8ijz4rxsainlriy6g5mkn4wl7hwgk9mm0cwfxvai3r1n28", - "depends": ["doParallel", "fastDummies", "foreach", "iterators", "MASS", "mvtnorm", "parabar", "scales"] + "version": "0.0.7", + "sha256": "1596imfnk0kfygw3p7pcn3wkcppkq15rqvm1sdn3kfykwcb794jr", + "depends": ["MASS", "doParallel", "fastDummies", "foreach", "iterators", "mvtnorm", "parabar", "scales"] }, "ClusteredMutations": { "name": "ClusteredMutations", @@ -5645,7 +5729,7 @@ "name": "Clustering", "version": "1.7.10", "sha256": "051x3140xr8g0grlmsff4m8gfc613hrfgldy0a7nm0f9w90ragsx", - "depends": ["amap", "apcluster", "cluster", "ClusterR", "data_table", "dplyr", "foreach", "future", "ggplot2", "gmp", "pracma", "pvclust", "shiny", "sqldf", "toOrdinal", "xtable"] + "depends": ["ClusterR", "amap", "apcluster", "cluster", "data_table", "dplyr", "foreach", "future", "ggplot2", "gmp", "pracma", "pvclust", "shiny", "sqldf", "toOrdinal", "xtable"] }, "CoClust": { "name": "CoClust", @@ -5681,19 +5765,19 @@ "name": "CoMiRe", "version": "0.8", "sha256": "0wq1li1snn4c01vw1zqv6s9sqjrmiw04pkkmx2zdy5wg6bzfz363", - "depends": ["ggplot2", "gtools", "KernSmooth", "mvtnorm", "Rcpp", "RcppArmadillo", "rlang", "splines2", "truncnorm"] + "depends": ["KernSmooth", "Rcpp", "RcppArmadillo", "ggplot2", "gtools", "mvtnorm", "rlang", "splines2", "truncnorm"] }, "CoNI": { "name": "CoNI", "version": "0.1.0", "sha256": "19nyn4gh4bnrvbbh2df8459015fkb2bgwwmq17vqq7r2j4gkgxzh", - "depends": ["cocor", "data_table", "doParallel", "dplyr", "forcats", "foreach", "genefilter", "ggplot2", "ggrepel", "gplots", "gridExtra", "Hmisc", "igraph", "plyr", "ppcor", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Hmisc", "cocor", "data_table", "doParallel", "dplyr", "forcats", "foreach", "genefilter", "ggplot2", "ggrepel", "gplots", "gridExtra", "igraph", "plyr", "ppcor", "rlang", "tibble", "tidyr", "tidyselect"] }, "CoOL": { "name": "CoOL", "version": "1.1.2", "sha256": "18z7s8bvnym4xj0hh5m6bwm86ddmsgivqv4g5zbd9m87l7khl9pn", - "depends": ["ClustGeo", "data_table", "ggplot2", "mltools", "plyr", "pROC", "Rcpp", "RcppArmadillo", "wesanderson"] + "depends": ["ClustGeo", "Rcpp", "RcppArmadillo", "data_table", "ggplot2", "mltools", "pROC", "plyr", "wesanderson"] }, "CoRpower": { "name": "CoRpower", @@ -5705,13 +5789,13 @@ "name": "CoSMoS", "version": "2.1.0", "sha256": "149mybfxaqssawp8fqhjiv3xljzflc02y4pfvavz7rklfplidqkb", - "depends": ["animation", "cowplot", "data_table", "directlabels", "ggplot2", "ggquiver", "mAr", "Matrix", "matrixcalc", "MBA", "mvtnorm", "nloptr", "plot3D", "pracma"] + "depends": ["MBA", "Matrix", "animation", "cowplot", "data_table", "directlabels", "ggplot2", "ggquiver", "mAr", "matrixcalc", "mvtnorm", "nloptr", "plot3D", "pracma"] }, "CoTiMA": { "name": "CoTiMA", "version": "0.8.0", "sha256": "15kc15jax3z4bfwq0mf7dahwv68nq4njj5a0gwzbr1ww4rrwg1r1", - "depends": ["abind", "crayon", "ctsem", "doParallel", "foreach", "lavaan", "MASS", "MBESS", "OpenMx", "openxlsx", "psych", "rootSolve", "RPushbullet", "scholar", "stringi", "zcurve"] + "depends": ["MASS", "MBESS", "OpenMx", "RPushbullet", "abind", "crayon", "ctsem", "doParallel", "foreach", "lavaan", "openxlsx", "psych", "rootSolve", "scholar", "stringi", "zcurve"] }, "CoastlineFD": { "name": "CoastlineFD", @@ -5729,13 +5813,13 @@ "name": "CodeDepends", "version": "0.6.6", "sha256": "0msq5ksjqp2pjzl6f1vizw53gdf5lz520bpdr5dbjwz5mc1mp0bz", - "depends": ["codetools", "graph", "XML"] + "depends": ["XML", "codetools", "graph"] }, "CodelistGenerator": { "name": "CodelistGenerator", - "version": "3.0", - "sha256": "1fg9xbznd5zmn35rfg52899yx0di7hqx6sznvd8a9gnc2xrp4723", - "depends": ["checkmate", "cli", "DBI", "dplyr", "glue", "lifecycle", "lubridate", "magrittr", "omopgenerics", "PatientProfiles", "purrr", "RJSONIO", "rlang", "stringr", "tidyr", "tidyselect", "vctrs", "visOmopResults"] + "version": "3.1.0", + "sha256": "045jkffcyawk72w7x1gxh6i0y8aigj59g2cn6qflr0x8jpxwg4x9", + "depends": ["DBI", "PatientProfiles", "RJSONIO", "checkmate", "cli", "dplyr", "glue", "lifecycle", "lubridate", "magrittr", "omopgenerics", "purrr", "rlang", "stringr", "tidyr", "tidyselect", "vctrs", "visOmopResults"] }, "CohensdpLibrary": { "name": "CohensdpLibrary", @@ -5747,25 +5831,25 @@ "name": "CohortAlgebra", "version": "0.3.0", "sha256": "05sn073sfmngjbq2g198nckxw2zwk2jj69xf3pddlrka05v3a1b9", - "depends": ["checkmate", "DatabaseConnector", "dplyr", "lifecycle", "rlang", "SqlRender"] + "depends": ["DatabaseConnector", "SqlRender", "checkmate", "dplyr", "lifecycle", "rlang"] }, "CohortCharacteristics": { "name": "CohortCharacteristics", - "version": "0.2.1", - "sha256": "1hyd0pl3aq7ww3szr7p0zb4cnvk9x1a6kpg04qdv9x72wkl6mscq", - "depends": ["CDMConnector", "checkmate", "cli", "DiagrammeR", "dplyr", "ggpubr", "magrittr", "omopgenerics", "PatientProfiles", "rlang", "snakecase", "stringr", "tidyr", "visOmopResults"] + "version": "0.2.2", + "sha256": "11cg3shf62njzpqh6wahgpg2c1ymqf4xkn6ip6ymab7dvq2w12wh", + "depends": ["CDMConnector", "PatientProfiles", "checkmate", "cli", "dplyr", "magrittr", "omopgenerics", "rlang", "snakecase", "stringr", "tidyr", "visOmopResults"] }, "CohortConstructor": { "name": "CohortConstructor", - "version": "0.2.1", - "sha256": "0wa02j80zy4sq7p7hyx97yvfbgfgb1zr0qa9vlhv6xy7m0wggqlz", - "depends": ["CDMConnector", "checkmate", "cli", "dbplyr", "dplyr", "glue", "magrittr", "omopgenerics", "PatientProfiles", "purrr", "rlang", "tidyr"] + "version": "0.2.2", + "sha256": "0wpfawsvdbllbr7vm83agyzcw64fjn4pwl1hzqm966iim118ch7n", + "depends": ["CDMConnector", "PatientProfiles", "checkmate", "cli", "dbplyr", "dplyr", "glue", "magrittr", "omopgenerics", "purrr", "rlang", "tidyr"] }, "CohortExplorer": { "name": "CohortExplorer", "version": "0.1.0", "sha256": "1jskxg72g7n5n3zg2kmkhykcrbf30q0h919273n6lm6nw0pzn44d", - "depends": ["checkmate", "DatabaseConnector", "dplyr", "lifecycle", "ParallelLogger", "rlang"] + "depends": ["DatabaseConnector", "ParallelLogger", "checkmate", "dplyr", "lifecycle", "rlang"] }, "CohortPlat": { "name": "CohortPlat", @@ -5775,21 +5859,21 @@ }, "CohortSurvival": { "name": "CohortSurvival", - "version": "0.5.1", - "sha256": "03pca2isc7gq9nkkghwqcjf35fn23iacdxsx04v3yacapl8975cn", - "depends": ["broom", "CDMConnector", "checkmate", "cli", "DBI", "dbplyr", "dplyr", "lubridate", "magrittr", "omopgenerics", "PatientProfiles", "rlang", "scales", "stringr", "survival", "tibble", "tidyr", "visOmopResults"] + "version": "0.5.2", + "sha256": "02p0n7nhwa50z3w3q20nx2pp6sdkbyqwmk7ix7s2cc8i7qxxhlfl", + "depends": ["CDMConnector", "DBI", "PatientProfiles", "broom", "checkmate", "cli", "dbplyr", "dplyr", "lubridate", "magrittr", "omopgenerics", "purrr", "rlang", "scales", "stringr", "survival", "tibble", "tidyr", "visOmopResults"] }, "CohortSymmetry": { "name": "CohortSymmetry", - "version": "0.1.0", - "sha256": "1vbk701yz7wcfv906a12h26m2hq787x91lz2c8qn62vxlb794q1h", - "depends": ["CDMConnector", "dplyr", "ggplot2", "magrittr", "omock", "omopgenerics", "PatientProfiles", "rlang", "stringr", "tibble", "tidyr", "visOmopResults"] + "version": "0.1.2", + "sha256": "13qv4fa673lnq3jyp97bbrcax0sw0lk2w2xxy8vyb8jnf5ajlydr", + "depends": ["CDMConnector", "CodelistGenerator", "DrugUtilisation", "PatientProfiles", "dplyr", "duckdb", "flextable", "ggplot2", "gt", "here", "magrittr", "omock", "omopgenerics", "rlang", "stringr", "tibble", "tidyr", "visOmopResults"] }, "Coinprofile": { "name": "Coinprofile", "version": "0.1.9", "sha256": "1bcip62gm34cx5m8a1mx9px2rhgvdmsgnn6q9q40k8p5hw4cx9g0", - "depends": ["coin", "exactRankTests", "ggplot2", "plyr", "Rdpack", "zoo"] + "depends": ["Rdpack", "coin", "exactRankTests", "ggplot2", "plyr", "zoo"] }, "CollapseLevels": { "name": "CollapseLevels", @@ -5801,7 +5885,7 @@ "name": "CollocInfer", "version": "1.0.4", "sha256": "1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj", - "depends": ["deSolve", "fda", "MASS", "Matrix", "spam"] + "depends": ["MASS", "Matrix", "deSolve", "fda", "spam"] }, "ColorNameR": { "name": "ColorNameR", @@ -5813,7 +5897,7 @@ "name": "Colossus", "version": "1.1.1", "sha256": "01mra2ai88p10qwmsc1ph4kpgyvd4f3crk2gl5w782qggfgfabv8", - "depends": ["callr", "data_table", "processx", "Rcpp", "RcppEigen", "rlang", "stringr", "testthat"] + "depends": ["Rcpp", "RcppEigen", "callr", "data_table", "processx", "rlang", "stringr", "testthat"] }, "ComICS": { "name": "ComICS", @@ -5839,17 +5923,23 @@ "sha256": "0kj96i2ahq7ax1nx66jac8bbdiiyviwnzr4cr4gn0b8y580rdcwi", "depends": [] }, + "CommEcol": { + "name": "CommEcol", + "version": "1.8.1", + "sha256": "11pzb6m4ywkdrpckqahq1fddhgb9z6148vhaawyawyi7n3p7sggp", + "depends": ["adespatial", "ape", "betapart", "gmp", "picante", "rncl", "vegan"] + }, "CommKern": { "name": "CommKern", "version": "1.0.1", "sha256": "1nr1mfc8nigwp8y6f4hiw7irbmyicdk5vjvlcndcywd1lzmlwi4b", - "depends": ["ggnewscale", "ggplot2", "gridExtra", "Matrix", "RColorBrewer", "reshape2"] + "depends": ["Matrix", "RColorBrewer", "ggnewscale", "ggplot2", "gridExtra", "reshape2"] }, "CommonDataModel": { "name": "CommonDataModel", "version": "0.2.0", "sha256": "1yxksxv9dma2f6l3asg165f6hn9f6w4ws04xfprnb100sm0zq1z0", - "depends": ["DatabaseConnector", "DBI", "dplyr", "readr", "rJava", "rmarkdown", "SqlRender", "stringr"] + "depends": ["DBI", "DatabaseConnector", "SqlRender", "dplyr", "rJava", "readr", "rmarkdown", "stringr"] }, "CommonJavaJars": { "name": "CommonJavaJars", @@ -5867,7 +5957,7 @@ "name": "Comp2ROC", "version": "1.1.4", "sha256": "06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d", - "depends": ["boot", "ROCR"] + "depends": ["ROCR", "boot"] }, "CompAREdesign": { "name": "CompAREdesign", @@ -5879,12 +5969,12 @@ "name": "CompDist", "version": "1.0", "sha256": "02c18ksk6clv674yh79bzg3mh9hymzhal51j6g0rnvqd5ra8g66c", - "depends": ["actuar", "fExtremes", "numDeriv", "PearsonDS", "rmutil", "VGAM"] + "depends": ["PearsonDS", "VGAM", "actuar", "fExtremes", "numDeriv", "rmutil"] }, "CompExpDes": { "name": "CompExpDes", - "version": "1.0.0", - "sha256": "17ib9ln5rwy0jmadciqiynfqxyx57hfjyvp46pr9alix3sgh140q", + "version": "1.0.1", + "sha256": "1nx2ndv42vxaxv3g2cfd7n0xsdb0kdcaa2b43rf2yazyc8a5hdw1", "depends": [] }, "CompGR": { @@ -5897,7 +5987,7 @@ "name": "CompMix", "version": "0.1.0", "sha256": "1b7vmkyqh8m2p72wr469anwqwghiw6m9f1p8q3mr6l1pgx7nqhsn", - "depends": ["bkmr", "devtools", "gglasso", "glmnet", "gWQS", "hierNet", "higlasso", "Matrix", "mvtnorm", "pROC", "qgcomp", "randomForest", "SuperLearner"] + "depends": ["Matrix", "SuperLearner", "bkmr", "devtools", "gWQS", "gglasso", "glmnet", "hierNet", "higlasso", "mvtnorm", "pROC", "qgcomp", "randomForest"] }, "CompModels": { "name": "CompModels", @@ -5927,7 +6017,7 @@ "name": "CompareCausalNetworks", "version": "0.2.6.2", "sha256": "0r8gdr834jqqwiq9h4yz19gcg92rbdd4fr3fwi083vfjml82f0v0", - "depends": ["data_table", "expm", "Matrix"] + "depends": ["Matrix", "data_table", "expm"] }, "CompareMultipleModels": { "name": "CompareMultipleModels", @@ -5945,13 +6035,13 @@ "name": "ComparisonSurv", "version": "1.1.1", "sha256": "0lidakxb1ab6bpb7sf2arjl1xpym1lzxbh63g0x4c2dm7h0kzkwi", - "depends": ["muhaz", "survival", "survRM2", "TSHRC"] + "depends": ["TSHRC", "muhaz", "survRM2", "survival"] }, "Compind": { "name": "Compind", "version": "3.1", "sha256": "0k45gazca94dscqhy05p68k755al4gd1gilz5svq5h6cv5fijhxk", - "depends": ["Benchmarking", "boot", "FactoMineR", "GPArotation", "GWmodel", "Hmisc", "lpSolve", "MASS", "nonparaeff", "np", "psych", "Rcompadre", "smaa", "sp", "spdep"] + "depends": ["Benchmarking", "FactoMineR", "GPArotation", "GWmodel", "Hmisc", "MASS", "Rcompadre", "boot", "lpSolve", "nonparaeff", "np", "psych", "smaa", "sp", "spdep"] }, "ComplexUpset": { "name": "ComplexUpset", @@ -5963,19 +6053,19 @@ "name": "CompositeReliability", "version": "1.0.3", "sha256": "04qpwqrz1x1hdjfin77fb4kywv9sspzdq7kn4f7jxaaz3ykhrhkc", - "depends": ["dplyr", "ggplot2", "lme4", "magrittr", "plyr", "psych", "reshape2", "Rsolnp", "tidyr"] + "depends": ["Rsolnp", "dplyr", "ggplot2", "lme4", "magrittr", "plyr", "psych", "reshape2", "tidyr"] }, "Compositional": { "name": "Compositional", - "version": "6.8", - "sha256": "066fn6qndxgz6lp15wznjq1jhbiq917iiidkx5py3ixdk3gbbg7c", - "depends": ["cluster", "Directional", "doParallel", "emplik", "energy", "FlexDir", "foreach", "glmnet", "MASS", "Matrix", "mda", "mixture", "mvhtests", "nnet", "pchc", "quadprog", "regda", "Rfast", "Rfast2", "Rnanoflann", "sn"] + "version": "6.9", + "sha256": "09xv3r9g5bkn2ra11zswvly1x9bj7xq1z39fd2kl0w3vxg9mjih1", + "depends": ["MASS", "Matrix", "Rfast", "Rfast2", "Rnanoflann", "cluster", "doParallel", "emplik", "energy", "foreach", "glmnet", "mda", "minpack_lm", "mixture", "mvhtests", "nnet", "quadprog", "quantreg", "regda", "sn"] }, "CompositionalML": { "name": "CompositionalML", "version": "1.0", "sha256": "1gnr8iqgwx461gm0ff1gvi6j8rw19a1lhz560hcq7sgymzp66l5r", - "depends": ["Boruta", "Compositional", "doParallel", "e1071", "foreach", "ranger", "Rfast", "Rfast2"] + "depends": ["Boruta", "Compositional", "Rfast", "Rfast2", "doParallel", "e1071", "foreach", "ranger"] }, "CompoundEvents": { "name": "CompoundEvents", @@ -6011,7 +6101,7 @@ "name": "ConconiAnaerobicThresholdTest", "version": "1.0.0", "sha256": "0lx1pz40l4qc755lxxvrvkjv6297q61m5vqdix8pw9j4h0wzyxll", - "depends": ["dplyr", "ggplot2", "SiZer", "trackeR"] + "depends": ["SiZer", "dplyr", "ggplot2", "trackeR"] }, "ConcordanceTest": { "name": "ConcordanceTest", @@ -6023,13 +6113,13 @@ "name": "CondCopulas", "version": "0.1.3", "sha256": "0yfph755iwdmkf453jkcf71i25z1v604swh7ggbbdv2awsb4isd9", - "depends": ["data_tree", "glmnet", "nnet", "ordinalNet", "pbapply", "statmod", "tree", "VineCopula", "wdm"] + "depends": ["VineCopula", "data_tree", "glmnet", "nnet", "ordinalNet", "pbapply", "statmod", "tree", "wdm"] }, "CondIndTests": { "name": "CondIndTests", "version": "0.1.5", "sha256": "0km4z8wnj5msg1pmphk2fccbw1cidsxv174817lwcyii9nf5iwsm", - "depends": ["caTools", "kernlab", "lawstat", "MASS", "mgcv", "mize", "pracma", "quantregForest", "randomForest", "RPtests"] + "depends": ["MASS", "RPtests", "caTools", "kernlab", "lawstat", "mgcv", "mize", "pracma", "quantregForest", "randomForest"] }, "CondMVT": { "name": "CondMVT", @@ -6053,7 +6143,7 @@ "name": "ConfZIC", "version": "1.0.1", "sha256": "0x9933zirfdkg2ljm3kk1nalk9ri0rrqi11q07dkyh78p4w9lmsp", - "depends": ["cmna", "ltsa", "MuMIn", "mvtnorm", "psych", "tidytable"] + "depends": ["MuMIn", "cmna", "ltsa", "mvtnorm", "psych", "tidytable"] }, "ConfidenceEllipse": { "name": "ConfidenceEllipse", @@ -6065,13 +6155,13 @@ "name": "ConfigParser", "version": "1.0.0", "sha256": "0jjh6gz5qcqhirzkmg7a4lnf8n3mjly15x2mvbvdpjkk7iv3w9m3", - "depends": ["ini", "R6"] + "depends": ["R6", "ini"] }, "ConformalSmallest": { "name": "ConformalSmallest", "version": "1.0", "sha256": "0r74hbz0dmz69zsw2vdl858vj27p6f2xcpv1l1il4r52cmshg1h8", - "depends": ["glmnet", "MASS", "mvtnorm", "quantregForest"] + "depends": ["MASS", "glmnet", "mvtnorm", "quantregForest"] }, "ConfusionTableR": { "name": "ConfusionTableR", @@ -6101,7 +6191,7 @@ "name": "ConnectednessApproach", "version": "1.0.3", "sha256": "1vbnj2r4x8pfzdagky33xz9kpb23d7vz5ddgms8fp15zjilsz2nw", - "depends": ["car", "frequencyConnectedness", "glmnet", "igraph", "L1pack", "MASS", "moments", "PerformanceAnalytics", "progress", "quantreg", "riskParityPortfolio", "rmgarch", "rugarch", "urca", "xts", "zoo"] + "depends": ["L1pack", "MASS", "PerformanceAnalytics", "car", "frequencyConnectedness", "glmnet", "igraph", "moments", "progress", "quantreg", "riskParityPortfolio", "rmgarch", "rugarch", "urca", "xts", "zoo"] }, "ConsRank": { "name": "ConsRank", @@ -6119,14 +6209,20 @@ "name": "ConsReg", "version": "0.1.0", "sha256": "0ck188ahzprzvqdh2q05bcg9b68dw3xiqqb1xirbm4rp5chyr419", - "depends": ["adaptMCMC", "data_table", "DEoptim", "dfoptim", "FME", "forecast", "GA", "GenSA", "ggplot2", "MCMCpack", "Metrics", "nloptr", "Rcpp", "rlang", "Rsolnp"] + "depends": ["DEoptim", "FME", "GA", "GenSA", "MCMCpack", "Metrics", "Rcpp", "Rsolnp", "adaptMCMC", "data_table", "dfoptim", "forecast", "ggplot2", "nloptr", "rlang"] }, "ConsensusClustering": { "name": "ConsensusClustering", - "version": "1.2.0", - "sha256": "1la9pp8jk5mcn1y80h3wfxw30pnys6p573iv7r3b8lgf233cnjar", + "version": "1.5.0", + "sha256": "0l9xc39zbxqiq5z9n8qxgwq19hx5n72vq1vyz98dy79p7wrl10nv", "depends": ["assertthat", "cluster", "dplyr", "igraph", "mvtnorm"] }, + "ConsensusOPLS": { + "name": "ConsensusOPLS", + "version": "1.0.0", + "sha256": "1fv0a3hjqylrbqsfv7gfn33ni7cc8351shianwsp1caqjza85yr2", + "depends": ["reshape2"] + }, "ContRespPP": { "name": "ContRespPP", "version": "0.4.2", @@ -6161,7 +6257,7 @@ "name": "ConvertPar", "version": "0.1", "sha256": "1czw97ya73dinad0n664045s9918a21kv97bpkal40kg029vnw59", - "depends": ["mirt", "neuralnet", "RWeka"] + "depends": ["RWeka", "mirt", "neuralnet"] }, "Convolutioner": { "name": "Convolutioner", @@ -6173,7 +6269,7 @@ "name": "CooRTweet", "version": "2.0.2", "sha256": "0gziybfp640p2gskbz80kx9ikmg3mpk0m937iq44k1906lrvp9p2", - "depends": ["data_table", "igraph", "lubridate", "RcppSimdJson", "stringi", "tidytable"] + "depends": ["RcppSimdJson", "data_table", "igraph", "lubridate", "stringi", "tidytable"] }, "CooccurrenceAffinity": { "name": "CooccurrenceAffinity", @@ -6203,12 +6299,12 @@ "name": "CopSens", "version": "0.1.0", "sha256": "0ljp2c25zmyiv88mdari08z9845y9niyg90a8vlq75im5w825w8a", - "depends": ["CVXR", "dplyr", "ggplot2", "MASS", "pcaMethods", "tidyr", "tidyverse"] + "depends": ["CVXR", "MASS", "dplyr", "ggplot2", "pcaMethods", "tidyr", "tidyverse"] }, "CopernicusDEM": { "name": "CopernicusDEM", - "version": "1.0.3", - "sha256": "073glifdcrg11ffnz1gim36800jn0saqdamqlda81q4a4lla7il5", + "version": "1.0.4", + "sha256": "00rpdfspyd94jr2ahw7dc661wdgxnxzcxgg40yn48c1v6hxjhfhp", "depends": ["doParallel", "foreach", "glue", "sf"] }, "CopernicusMarine": { @@ -6239,7 +6335,7 @@ "name": "CopulaCenR", "version": "1.2.3", "sha256": "1z1a9hrb5v784j46yc2dsbizbis8pb5zdbc4cky8yws7swiax5m1", - "depends": ["boot", "caret", "copBasic", "copula", "corpcor", "flexsurv", "foreach", "icenReg", "magrittr", "plotly", "pracma", "survival", "VineCopula"] + "depends": ["VineCopula", "boot", "caret", "copBasic", "copula", "corpcor", "flexsurv", "foreach", "icenReg", "magrittr", "plotly", "pracma", "survival"] }, "CopulaGAMM": { "name": "CopulaGAMM", @@ -6251,7 +6347,7 @@ "name": "CopulaInference", "version": "0.5.0", "sha256": "10r2ni62fh6zl0im1n7apjf6kx2fprifn71rnaf7dh7xypdkqyw1", - "depends": ["doParallel", "foreach", "Matrix", "rvinecopulib"] + "depends": ["Matrix", "doParallel", "foreach", "rvinecopulib"] }, "CopulaREMADA": { "name": "CopulaREMADA", @@ -6269,31 +6365,31 @@ "name": "CorMID", "version": "0.1.9", "sha256": "08dr6c3pvich7arbq0ak9s356s29ynw4v6s1mz5bw9kddrrlswlq", - "depends": ["plyr", "Rdisop"] + "depends": ["Rdisop", "plyr"] }, "Corbi": { "name": "Corbi", "version": "0.6-2", "sha256": "13lbh6fcfrpgz459mjdnfkd8kys2350s8j0vv9ps18092264gh42", - "depends": ["CRF", "igraph", "MASS", "Matrix"] + "depends": ["CRF", "MASS", "Matrix", "igraph"] }, "CoreMicrobiomeR": { "name": "CoreMicrobiomeR", "version": "0.1.0", "sha256": "18zqs14j014qsmqqgn2yyf1djvr92spj46aq474jh6f8sdqvbqqz", - "depends": ["edgeR", "fastmatch", "ggplot2", "ggrepel", "plotly", "reshape2", "SRS", "vegan"] + "depends": ["SRS", "edgeR", "fastmatch", "ggplot2", "ggrepel", "plotly", "reshape2", "vegan"] }, "CornerstoneR": { "name": "CornerstoneR", "version": "2.0.2", "sha256": "04dvryhcyi7f6bmm4067cn5vmy7kdqi3bys7ln8nnsc0kkdjxhi5", - "depends": ["checkmate", "data_table", "minpack_lm", "ranger", "SpatialTools", "vcd"] + "depends": ["SpatialTools", "checkmate", "data_table", "minpack_lm", "ranger", "vcd"] }, "CoronaNetR": { "name": "CoronaNetR", "version": "0.3.0", "sha256": "1qqlkcbwmr9g8rnsgb7dd1npd09sva11y6fy1g7l4wdvmpw07ymh", - "depends": ["httr", "R_utils", "readr"] + "depends": ["R_utils", "httr", "readr"] }, "CorrBin": { "name": "CorrBin", @@ -6329,13 +6425,13 @@ "name": "Correlplot", "version": "1.1.0", "sha256": "1kpan2ifpqhw6nzkx1ww6k5xwr624jysz6l6i9xg35np4xfcgrwz", - "depends": ["calibrate", "corrplot", "ggplot2", "lsei", "MASS", "xtable"] + "depends": ["MASS", "calibrate", "corrplot", "ggplot2", "lsei", "xtable"] }, "Counterfactual": { "name": "Counterfactual", "version": "1.2", "sha256": "1spryxvnkdz728rl4nb7zlqhynnh0b4m7lnhq4i1n13gfsz1m5j4", - "depends": ["doParallel", "doRNG", "foreach", "Hmisc", "quantreg", "survival"] + "depends": ["Hmisc", "doParallel", "doRNG", "foreach", "quantreg", "survival"] }, "Counternull": { "name": "Counternull", @@ -6347,13 +6443,13 @@ "name": "Countr", "version": "3.5.8", "sha256": "1bv19ni79f94lrn4656hsxi6nnhrn136mx5y757a4r39avsgbl06", - "depends": ["boot", "car", "dplyr", "flexsurv", "Formula", "lattice", "lmtest", "MASS", "Matrix", "numDeriv", "optimx", "RColorBrewer", "Rcpp", "RcppArmadillo", "Rdpack", "standardize", "VGAM", "xtable"] + "depends": ["Formula", "MASS", "Matrix", "RColorBrewer", "Rcpp", "RcppArmadillo", "Rdpack", "VGAM", "boot", "car", "dplyr", "flexsurv", "lattice", "lmtest", "numDeriv", "optimx", "standardize", "xtable"] }, "CountsEPPM": { "name": "CountsEPPM", "version": "3.1", "sha256": "19lb8m36s3ilvh9jia4b291a8wmfwvh2sb8jbpwxg7ksvj5bvcz6", - "depends": ["expm", "Formula", "lmtest", "numDeriv"] + "depends": ["Formula", "expm", "lmtest", "numDeriv"] }, "CovCombR": { "name": "CovCombR", @@ -6363,27 +6459,27 @@ }, "CovRegRF": { "name": "CovRegRF", - "version": "2.0.0", - "sha256": "17wr2k6ws1l8lf4gfq59l7c2p95181sk5r2acay21pnh7q39x8wd", - "depends": ["data_table", "data_tree", "DiagrammeR"] + "version": "2.0.1", + "sha256": "0pzcdbwj1an8fls04g7znhbfaybqdp4rsjgnsvrh8rcmphnh48c9", + "depends": ["DiagrammeR", "data_table", "data_tree"] }, "CovSel": { "name": "CovSel", "version": "1.2.1", "sha256": "02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk", - "depends": ["dr", "MASS", "np"] + "depends": ["MASS", "dr", "np"] }, "CovTools": { "name": "CovTools", "version": "0.5.4", "sha256": "1bkqg3kzy2ahjqldcf6x55wkrmb4s6y72y9cj0jwb1fph0a1p3sm", - "depends": ["doParallel", "expm", "foreach", "geigen", "Matrix", "mvtnorm", "pracma", "Rcpp", "RcppArmadillo", "Rdpack", "shapes", "SHT"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "SHT", "doParallel", "expm", "foreach", "geigen", "mvtnorm", "pracma", "shapes"] }, "CovidMutations": { "name": "CovidMutations", "version": "0.1.3", "sha256": "03bl9frjfj8i7ydgi245113yzyg8rkgqxasicmqcjdd68zbz00kn", - "depends": ["cowplot", "dplyr", "ggplot2", "ggpubr", "seqinr", "stringr", "VennDiagram"] + "depends": ["VennDiagram", "cowplot", "dplyr", "ggplot2", "ggpubr", "seqinr", "stringr"] }, "CoxAIPW": { "name": "CoxAIPW", @@ -6419,7 +6515,7 @@ "name": "Coxmos", "version": "1.0.2", "sha256": "052af5hx820wmvflvz4pv3jlmmwap9d0lzx9k7v1ps6cidarz0wm", - "depends": ["caret", "cowplot", "furrr", "future", "ggplot2", "ggpubr", "ggrepel", "glmnet", "MASS", "mixOmics", "progress", "purrr", "Rdpack", "scattermore", "survcomp", "survival", "survminer", "svglite", "tidyr"] + "depends": ["MASS", "Rdpack", "caret", "cowplot", "furrr", "future", "ggplot2", "ggpubr", "ggrepel", "glmnet", "mixOmics", "progress", "purrr", "scattermore", "survcomp", "survival", "survminer", "svglite", "tidyr"] }, "CpGFilter": { "name": "CpGFilter", @@ -6429,8 +6525,8 @@ }, "CpGassoc": { "name": "CpGassoc", - "version": "2.60", - "sha256": "1zx18x8pxjl2ajnj7a7lb8383m75ysg17f4mzz0vkgl5mnf617ny", + "version": "2.70", + "sha256": "0y3jwy4kpqw6r4w93bm1c7yjxpv5jyhpmgbbkagb7qjvbsg935qx", "depends": ["nlme"] }, "CpmERCCutoff": { @@ -6443,7 +6539,7 @@ "name": "CptNonPar", "version": "0.2.1", "sha256": "1mpjxy5wivadbska51g30594rqgdx3g0m4jr90lnnri2yb8a78kw", - "depends": ["doParallel", "foreach", "iterators", "parallelly", "Rcpp", "Rfast"] + "depends": ["Rcpp", "Rfast", "doParallel", "foreach", "iterators", "parallelly"] }, "CreditRisk": { "name": "CreditRisk", @@ -6461,18 +6557,18 @@ "name": "CropScapeR", "version": "1.1.5", "sha256": "0dhziq4fybb987jv10g0wd4n765c4d87h86g96qg8wg6cx11vi6m", - "depends": ["data_table", "dplyr", "httr", "magrittr", "raster", "RJSONIO", "sf"] + "depends": ["RJSONIO", "data_table", "dplyr", "httr", "magrittr", "raster", "sf"] }, "CropWaterBalance": { "name": "CropWaterBalance", "version": "0.2.0", "sha256": "0hfy1y26v2cy1pi014zxrmp91ypnlb4jk1sa4zb0mhlmlxjmdijh", - "depends": ["lubridate", "PowerSDI"] + "depends": ["PowerSDI", "lubridate"] }, "CrossCarry": { "name": "CrossCarry", - "version": "0.1.0", - "sha256": "1iglwsx5b29zjl7ikngyb3kf0kfacqxlg01p6vn84dblwgh2gmak", + "version": "0.2.0", + "sha256": "0l65mxajhzdxwwx31mlfx38fsgkwd9iziyn8a6cca9pjhkf7qldg", "depends": ["dplyr", "gee", "geepack", "ggplot2"] }, "CrossClustering": { @@ -6497,7 +6593,7 @@ "name": "Crossover", "version": "0.1-22", "sha256": "05fsl22h2q6l0g9hscs4f0w4d3skd9anr570ddmnqicxzdfpap5r", - "depends": ["CommonJavaJars", "crossdes", "digest", "ggplot2", "JavaGD", "MASS", "Matrix", "multcomp", "Rcpp", "RcppArmadillo", "rJava", "xtable"] + "depends": ["CommonJavaJars", "JavaGD", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "crossdes", "digest", "ggplot2", "multcomp", "rJava", "xtable"] }, "Crosstabs_Loglinear": { "name": "Crosstabs.Loglinear", @@ -6507,39 +6603,39 @@ }, "CruzPlot": { "name": "CruzPlot", - "version": "1.4.8", - "sha256": "19dza13mdd67g7710bzzg1bi32nhgr3c5vcyh98igw3q8hfk7ac8", - "depends": ["dplyr", "DT", "geosphere", "mapdata", "maps", "marmap", "shiny", "shinydashboard", "shinyjs", "stringr", "swfscDAS"] + "version": "1.4.9", + "sha256": "1x9cm4773xps2q1z8vpgb8fkdrrfcrvrz6qk2m734zz9c1v39733", + "depends": ["DT", "dplyr", "geosphere", "mapdata", "maps", "marmap", "shiny", "shinydashboard", "shinyjs", "stringr", "swfscDAS"] }, "CryptRndTest": { "name": "CryptRndTest", "version": "1.2.7", "sha256": "0skk0mgnkfknlbdidfh2jca1wa8rzgd29ypwpa8kdh83l9jhdi5g", - "depends": ["gmp", "kSamples", "LambertW", "Rmpfr", "sfsmisc", "tseries"] + "depends": ["LambertW", "Rmpfr", "gmp", "kSamples", "sfsmisc", "tseries"] }, "CsChange": { "name": "CsChange", "version": "0.1.7", "sha256": "1qggfi7g34iw0737azn4l9cn0chsiq4wa18v8i5znlaimzmifylr", - "depends": ["boot", "Hmisc", "rms", "survival"] + "depends": ["Hmisc", "boot", "rms", "survival"] }, "Cubist": { "name": "Cubist", - "version": "0.4.2.1", - "sha256": "0mwis0qjjj7wz4lxb8a0168l4az4523ybhxc0jygx8qrj3azwyph", + "version": "0.4.4", + "sha256": "140m4if4g4v74dwhzdp4bgdgy4zzcyplxqd311gfg7dn0kqzzmai", "depends": ["lattice", "reshape2"] }, "CureAuxSP": { "name": "CureAuxSP", "version": "0.0.1", "sha256": "1aay2hhciq6f79dz5cnqsfrvw6hlfidw4gvy7hyrnbqqlnqjwyr2", - "depends": ["lars", "MASS", "mvtnorm", "survival", "TCGAbiolinks"] + "depends": ["MASS", "TCGAbiolinks", "lars", "mvtnorm", "survival"] }, "CureDepCens": { "name": "CureDepCens", "version": "0.1.0", "sha256": "1i11yvh19zvv220d3jhnidjxq494wc3jg5054zq1pr09sxh2jnqn", - "depends": ["dlm", "Formula", "matrixStats", "rootSolve", "survival"] + "depends": ["Formula", "dlm", "matrixStats", "rootSolve", "survival"] }, "CurricularAnalytics": { "name": "CurricularAnalytics", @@ -6573,27 +6669,27 @@ }, "CvmortalityMult": { "name": "CvmortalityMult", - "version": "1.0.2", - "sha256": "0m11pzmhw7g25x4dmjakc5i66x5vvn086j6vj3r0bvyxiyyvi3gj", - "depends": ["forecast", "gnm", "sf", "StMoMo", "tmap"] + "version": "1.0.3", + "sha256": "04ad10sgmhy4n3c76l46sn5j1k62yfh4ipldln1kfkygl3zis1xf", + "depends": ["StMoMo", "forecast", "gnm", "sf", "tmap"] }, "Cyclops": { "name": "Cyclops", "version": "3.4.1", "sha256": "1zz6jgzsjswzafya43fabqcgfhwn65sk8lx023hhn33vw844sv5p", - "depends": ["Andromeda", "bit64", "dplyr", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "survival"] + "depends": ["Andromeda", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "bit64", "dplyr", "rlang", "survival"] }, "CytOpT": { "name": "CytOpT", "version": "0.9.4", "sha256": "008qm2kzclp0sy4ys7y0dsc894qrn7mazz9216w97rs2sn7kcrzx", - "depends": ["ggplot2", "MetBrewer", "patchwork", "reshape2", "reticulate", "testthat"] + "depends": ["MetBrewer", "ggplot2", "patchwork", "reshape2", "reticulate", "testthat"] }, "CytoSimplex": { "name": "CytoSimplex", "version": "0.1.1", "sha256": "0zknsizsh860hyij5zxpm3izfsiwnp7mshrrnk4fmxsjv9fcxahr", - "depends": ["ggplot2", "Matrix", "plot3D", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "plot3D", "rlang"] }, "CytobankAPI": { "name": "CytobankAPI", @@ -6605,25 +6701,25 @@ "name": "D2MCS", "version": "1.0.1", "sha256": "0rjfjnh8gcbm83cwqk1yjrjv6jsrarr53c629bkg9zw7s5sm35nz", - "depends": ["caret", "devtools", "dplyr", "FSelector", "ggplot2", "ggrepel", "gridExtra", "infotheo", "mccr", "mltools", "ModelMetrics", "questionr", "R6", "recipes", "tictoc", "varhandle"] + "depends": ["FSelector", "ModelMetrics", "R6", "caret", "devtools", "dplyr", "ggplot2", "ggrepel", "gridExtra", "infotheo", "mccr", "mltools", "questionr", "recipes", "tictoc", "varhandle"] }, "D3GB": { "name": "D3GB", "version": "2.0", "sha256": "0g86nyfrhqbnlvls2l5ppi2zlij2wpg6zq83qrllzzrh28qx0rjk", - "depends": ["base64enc", "DBI", "RSQLite"] + "depends": ["DBI", "RSQLite", "base64enc"] }, "D3mirt": { "name": "D3mirt", - "version": "1.1.0", - "sha256": "1a7c2q1rm8yhdsszh4lg6nca8sfyyvba3v4gchdjll7660grpyr7", + "version": "2.0.4", + "sha256": "0mdiirc0k8hlqyj9fq62bpgin6nk2jl604qdrcfh2ympwkm54iz6", "depends": ["mirt", "rgl"] }, "D3partitionR": { "name": "D3partitionR", "version": "0.5.0", "sha256": "10067rdgbpjzgw2wiq75kdd0gd7bl41hp16sxc0k2p72ybqfpw03", - "depends": ["data_table", "functional", "htmlwidgets", "magrittr", "RColorBrewer", "titanic"] + "depends": ["RColorBrewer", "data_table", "functional", "htmlwidgets", "magrittr", "titanic"] }, "D4TAlink_light": { "name": "D4TAlink.light", @@ -6635,13 +6731,13 @@ "name": "DA", "version": "1.2.0", "sha256": "0bcx6lh93yl1cawrbrkqx7dypypvfnf27nlxf9vkz16n1hy50xnl", - "depends": ["adegenet", "kernlab", "klaR", "lfda", "MASS", "plotly", "rARPACK"] + "depends": ["MASS", "adegenet", "kernlab", "klaR", "lfda", "plotly", "rARPACK"] }, "DAAG": { "name": "DAAG", "version": "1.25.6", "sha256": "0vm4r1ds2xxxf4vml6mrb5alnkr72a08nby88h3qk7xalny28xkf", - "depends": ["lattice", "latticeExtra", "Rdpack"] + "depends": ["Rdpack", "lattice", "latticeExtra"] }, "DAAGbio": { "name": "DAAGbio", @@ -6665,13 +6761,13 @@ "name": "DAISIE", "version": "4.4.1", "sha256": "0f1ym3k49m2wdilsg7vwsb7m4ccdg87pnaksmbqv9smcxn5v8rn2", - "depends": ["BH", "DDD", "deSolve", "doParallel", "foreach", "magrittr", "Matrix", "pracma", "Rcpp", "RcppEigen", "subplex", "tensor", "testit"] + "depends": ["BH", "DDD", "Matrix", "Rcpp", "RcppEigen", "deSolve", "doParallel", "foreach", "magrittr", "pracma", "subplex", "tensor", "testit"] }, "DAISIEprep": { "name": "DAISIEprep", "version": "0.4.0", "sha256": "0ch3mc725lip67fpbk405rv3bai44w13vvjlspv8y6jzmb5jg6bp", - "depends": ["ape", "castor", "DAISIE", "ggplot2", "ggtree", "phylobase", "rlang", "scales", "tibble"] + "depends": ["DAISIE", "ape", "castor", "ggplot2", "ggtree", "phylobase", "rlang", "scales", "tibble"] }, "DAKS": { "name": "DAKS", @@ -6695,7 +6791,7 @@ "name": "DALSM", "version": "0.9.1", "sha256": "00v3h9np8nfhiyiz6r4bs5gzqqw3qfx275ab1byvjsr42zx11qpr", - "depends": ["cubicBsplines", "MASS", "plyr"] + "depends": ["MASS", "cubicBsplines", "plyr"] }, "DALY": { "name": "DALY", @@ -6707,7 +6803,7 @@ "name": "DAMOCLES", "version": "2.3", "sha256": "0pk9gq82qa18fl7zp74d47bgy8lhj9rkvfq23w8844nz9kn58s1f", - "depends": ["ape", "caper", "DDD", "deSolve", "expm", "Hmisc", "Matrix", "matrixStats", "picante"] + "depends": ["DDD", "Hmisc", "Matrix", "ape", "caper", "deSolve", "expm", "matrixStats", "picante"] }, "DATAstudio": { "name": "DATAstudio", @@ -6731,7 +6827,7 @@ "name": "DBHC", "version": "0.0.3", "sha256": "0r9c2vjnrahi3kbg7gz3z9k1i8vdqc44rc6nq7xk1j2xs1s6wsxp", - "depends": ["ggplot2", "reshape2", "seqHMM", "TraMineR"] + "depends": ["TraMineR", "ggplot2", "reshape2", "seqHMM"] }, "DBI": { "name": "DBI", @@ -6743,7 +6839,7 @@ "name": "DBItest", "version": "1.8.1", "sha256": "0vj7989s9qip3mxjzffrm7prh0xxpp467y9m4ls7dz7m3b7inpxl", - "depends": ["blob", "callr", "DBI", "desc", "hms", "lubridate", "magrittr", "nanoarrow", "palmerpenguins", "rlang", "testthat", "withr"] + "depends": ["DBI", "blob", "callr", "desc", "hms", "lubridate", "magrittr", "nanoarrow", "palmerpenguins", "rlang", "testthat", "withr"] }, "DBModelSelect": { "name": "DBModelSelect", @@ -6761,19 +6857,19 @@ "name": "DBR", "version": "1.4.1", "sha256": "1gs9d1qmv4mcmryzzvmwbz6ycinhnxnkiv56l31mbqy50qjn9bi4", - "depends": ["coda", "MfUSampler"] + "depends": ["MfUSampler", "coda"] }, "DBTC": { "name": "DBTC", "version": "0.1.0", "sha256": "1w4sm78nvzmc7hjdpjxsj4qncwnymdqni5jkllircglsjimps75y", - "depends": ["dada2", "ggplot2", "pbapply", "plyr", "ShortRead", "taxonomizr"] + "depends": ["ShortRead", "dada2", "ggplot2", "pbapply", "plyr", "taxonomizr"] }, "DBTCShiny": { "name": "DBTCShiny", "version": "0.1.2", "sha256": "0rk9f4wbpmibydbmq17bjfgdznpl67xfd5f1srkpnai459c5ni6y", - "depends": ["DBTC", "DT", "ggplot2", "leaflet", "leaflet_extras", "magrittr", "shiny", "shinycssloaders", "shinydashboard", "shinyFiles", "shinyjs", "shinyWidgets"] + "depends": ["DBTC", "DT", "ggplot2", "leaflet", "leaflet_extras", "magrittr", "shiny", "shinyFiles", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs"] }, "DBfit": { "name": "DBfit", @@ -6785,7 +6881,7 @@ "name": "DBpower", "version": "0.1.0", "sha256": "04wwhzlc9g6il478ax5yvh74bbb6hs29jyslkiz3k1hi25hlpkrn", - "depends": ["combinat", "dplyr", "GBJ", "kit", "magrittr", "mvtnorm"] + "depends": ["GBJ", "combinat", "dplyr", "kit", "magrittr", "mvtnorm"] }, "DCCA": { "name": "DCCA", @@ -6797,7 +6893,7 @@ "name": "DCEM", "version": "2.0.5", "sha256": "04z0lya1dbkdzjbgn8g6p16969kc6s4zrk87wy0i42h2hx0yx1zv", - "depends": ["MASS", "matrixcalc", "mvtnorm", "Rcpp"] + "depends": ["MASS", "Rcpp", "matrixcalc", "mvtnorm"] }, "DCEmgmt": { "name": "DCEmgmt", @@ -6809,7 +6905,7 @@ "name": "DCEtool", "version": "1.1.0", "sha256": "18x0fk71is77cc5ldm890asqrm1dz45m14z2ic9df89fm0wpwrvg", - "depends": ["adjustedcranlogs", "dfidx", "DT", "ggplot2", "htmltools", "idefix", "knitr", "magrittr", "MASS", "mlogit", "mvtnorm", "readxl", "remotes", "rlist", "shiny", "shinyBS", "shinycssloaders", "shinyWidgets", "survival", "tidyr", "writexl"] + "depends": ["DT", "MASS", "adjustedcranlogs", "dfidx", "ggplot2", "htmltools", "idefix", "knitr", "magrittr", "mlogit", "mvtnorm", "readxl", "remotes", "rlist", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "survival", "tidyr", "writexl"] }, "DCG": { "name": "DCG", @@ -6827,7 +6923,7 @@ "name": "DCLEAR", "version": "1.0.13", "sha256": "0f8q0avzl3jpjly1jsg02lz8h38208j25nfdf1v79qcp4ia7m3pp", - "depends": ["ape", "BiocGenerics", "BiocParallel", "dplyr", "igraph", "Matrix", "matrixStats", "phangorn", "purrr", "rBayesianOptimization", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tensorflow", "tidyr"] + "depends": ["BiocGenerics", "BiocParallel", "Matrix", "Rcpp", "RcppArmadillo", "ape", "dplyr", "igraph", "matrixStats", "phangorn", "purrr", "rBayesianOptimization", "rlang", "stringr", "tensorflow", "tidyr"] }, "DCODE": { "name": "DCODE", @@ -6839,19 +6935,19 @@ "name": "DCPO", "version": "0.5.3", "sha256": "1h14xnii6kv6sc7pfxalif3bj0mifnxg46x4lwbixx9vzxxz96sq", - "depends": ["beepr", "BH", "dplyr", "forcats", "janitor", "purrr", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "beepr", "dplyr", "forcats", "janitor", "purrr", "rstan", "rstantools", "tibble", "tidyr"] }, "DCSmooth": { "name": "DCSmooth", "version": "1.1.2", "sha256": "19pkj8z9wm4g8kxz1j3jw2n0bwldsyakipxvqpwnmlg2g5j8f5b1", - "depends": ["doParallel", "foreach", "fracdiff", "plotly", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "fracdiff", "plotly"] }, "DCchoice": { "name": "DCchoice", "version": "0.2.0", "sha256": "0mkssdybfychg0jpx7542sdbhxv275lz82qhnag5r8qn0zsj7mx9", - "depends": ["Formula", "interval", "MASS"] + "depends": ["Formula", "MASS", "interval"] }, "DChaos": { "name": "DChaos", @@ -6863,7 +6959,7 @@ "name": "DCluster", "version": "0.2-10", "sha256": "01m41vaw26nlsisbwp627hmfxs823wcnzrmchxnp3rx4n40j82di", - "depends": ["boot", "MASS", "spdep"] + "depends": ["MASS", "boot", "spdep"] }, "DClusterm": { "name": "DClusterm", @@ -6875,7 +6971,7 @@ "name": "DDD", "version": "5.2.2", "sha256": "178b4j67vvn3g22s45gx9aqch24fij34yywbpvign2dkhzahnqkn", - "depends": ["ape", "BH", "DEoptim", "deSolve", "expm", "Matrix", "phytools", "Rcpp", "RcppEigen", "SparseM", "subplex"] + "depends": ["BH", "DEoptim", "Matrix", "Rcpp", "RcppEigen", "SparseM", "ape", "deSolve", "expm", "phytools", "subplex"] }, "DDHFm": { "name": "DDHFm", @@ -6893,7 +6989,7 @@ "name": "DDL", "version": "1.0.2", "sha256": "1scgg90njn8ahxdzbz1dyhr508hlipgaawk2pll0hk093abnqrlc", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "DDM": { "name": "DDM", @@ -6911,13 +7007,13 @@ "name": "DDPNA", "version": "0.3.3", "sha256": "10asskc757c2xmp2xc4v6gzp43jj4db93xjdq8hqqfvr0vyvmffy", - "depends": ["ggalt", "ggplot2", "Hmisc", "igraph", "MEGENA", "plyr", "scales", "VennDiagram"] + "depends": ["Hmisc", "MEGENA", "VennDiagram", "ggalt", "ggplot2", "igraph", "plyr", "scales"] }, "DDRTree": { "name": "DDRTree", "version": "0.1.5", "sha256": "16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk", - "depends": ["BH", "irlba", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "irlba"] }, "DDoutlier": { "name": "DDoutlier", @@ -6939,8 +7035,8 @@ }, "DEET": { "name": "DEET", - "version": "1.0.11", - "sha256": "1jb7mp84h6s26abn3ra0pjqra5ha1m4j4yvfvdi074wvd2zzkns5", + "version": "1.0.12", + "sha256": "19y9s2v65z7g36akpyr0ljzch4csq9la0cafkh5xb4d18xpr2h0h", "depends": ["ActivePathways", "downloader", "dplyr", "ggplot2", "ggrepel", "glmnet", "pbapply"] }, "DEEVD": { @@ -6975,8 +7071,8 @@ }, "DEPONS2R": { "name": "DEPONS2R", - "version": "1.2.2", - "sha256": "0izcmi194pd96gafma5hnnqgavwm51q7l9wnmbpl9siyxb7xfij6", + "version": "1.2.3", + "sha256": "1l09nl6dvm0h005m7wpic95d710qv0v7q4ac67cr5zsr2l0prj1z", "depends": ["jsonlite", "raster", "sf", "sp", "terra", "xml2"] }, "DES": { @@ -7029,8 +7125,8 @@ }, "DGEAR": { "name": "DGEAR", - "version": "0.1.3", - "sha256": "0pnfaamrqban478vxcr4cjklxqxh9kmxzd724jwq8a1xfgscs8pw", + "version": "0.1.4", + "sha256": "0knai1098ayp2z1s2x4zkk5npmakw30qk8qdp4hsmvwh21rijnzw", "depends": ["DescTools"] }, "DGEobj": { @@ -7043,7 +7139,7 @@ "name": "DGEobj.utils", "version": "1.0.6", "sha256": "01pbyz62vayism9bk6scx97yxwfmsss2af39grq46rilrcgrck3k", - "depends": ["assertthat", "DGEobj", "dplyr", "stringr"] + "depends": ["DGEobj", "assertthat", "dplyr", "stringr"] }, "DGLMExtPois": { "name": "DGLMExtPois", @@ -7055,19 +7151,19 @@ "name": "DGM", "version": "1.7.4", "sha256": "1f59spd4bwx4d1gbjaizjxccaslw1fvf8pxa9nrxi07j6kq9mg0h", - "depends": ["coin", "data_table", "ggplot2", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "coin", "data_table", "ggplot2", "reshape2"] }, "DGP4LCF": { "name": "DGP4LCF", "version": "1.0.0", "sha256": "1v8wh52wcxs4adp1h9xplj5vych867scjrw32pqdczmiawi3q9d5", - "depends": ["coda", "combinat", "corrplot", "factor_switching", "GPFDA", "mvtnorm", "pheatmap", "Rcpp", "RcppArmadillo"] + "depends": ["GPFDA", "Rcpp", "RcppArmadillo", "coda", "combinat", "corrplot", "factor_switching", "mvtnorm", "pheatmap"] }, "DHARMa": { "name": "DHARMa", "version": "0.4.6", "sha256": "0wsb59w6z8mwag2wfiqs8237sk5rf2w7z7araxa6pzslsdf3vz9j", - "depends": ["ape", "gap", "lme4", "lmtest", "Matrix", "qgam"] + "depends": ["Matrix", "ape", "gap", "lme4", "lmtest", "qgam"] }, "DHBins": { "name": "DHBins", @@ -7087,23 +7183,29 @@ "sha256": "1wrgx5b9w476g8s3jmccc027xdqbmcmnlhwf02g6j213rgy87p73", "depends": ["matlabr"] }, + "DIDHAD": { + "name": "DIDHAD", + "version": "1.0.1", + "sha256": "1cmzsa1yn19gw5mc5lyrsnf1ghil7a3mgh2a1ana6rfzb5bpq4fq", + "depends": ["MASS", "YatchewTest", "dplyr", "ggplot2", "haven", "nprobust", "plm", "rlang", "rnames"] + }, "DIDmultiplegt": { "name": "DIDmultiplegt", - "version": "0.1.4", - "sha256": "07rky436q6bq9ag6ix5r4k7i4ahbifx89c2dv9isag634kva6pvm", - "depends": ["assertthat", "dplyr", "fixest", "plotrix", "sampling", "stringr", "wooldridge"] + "version": "2.0.0", + "sha256": "14fa7zmhyz815z6h1ycvhcvq072g09jfjkcpyllxim4dl5430hdc", + "depends": ["DIDHAD", "DIDmultiplegtDYN", "dplyr", "fixest", "magrittr", "plotrix", "sampling", "stringr"] }, "DIDmultiplegtDYN": { "name": "DIDmultiplegtDYN", - "version": "1.0.11", - "sha256": "0i19i65hacrpfr8zn644a0viparig4np07fs91f7xs6gh7z1yv4c", + "version": "1.0.15", + "sha256": "050cjc66ydidqc633kyw5l7s7jlcpjj8nyaqkcwkgcxx349rag5m", "depends": ["car", "cowplot", "data_table", "dplyr", "ggplot2", "haven", "lmtest", "magrittr", "matlib", "plm", "rlang", "rnames", "sandwich", "xlsx"] }, "DIFM": { "name": "DIFM", "version": "1.0", "sha256": "126yn0kj6znpigxg7hsmpn67149mgl1nzv6zp772cwd8pdwpyklw", - "depends": ["gridExtra", "LaplacesDemon", "Matrix", "Rcpp", "RcppArmadillo", "sp", "spdep"] + "depends": ["LaplacesDemon", "Matrix", "Rcpp", "RcppArmadillo", "gridExtra", "sp", "spdep"] }, "DIFboost": { "name": "DIFboost", @@ -7121,7 +7223,7 @@ "name": "DIFplus", "version": "1.1", "sha256": "1k03lr437gx5y762z3h40hz9kcl4m8xgrndxvbyvsgmn2h6pbwsd", - "depends": ["plyr", "TestDataImputation"] + "depends": ["TestDataImputation", "plyr"] }, "DIFshiny": { "name": "DIFshiny", @@ -7133,7 +7235,7 @@ "name": "DIFtree", "version": "3.1.6", "sha256": "1ps3nb1a5dgxs187bcjsys4fpi0z4z6d84qlxg8rf1rvcfgg21r5", - "depends": ["gridBase", "penalized", "plotrix", "VGAM"] + "depends": ["VGAM", "gridBase", "penalized", "plotrix"] }, "DIGSS": { "name": "DIGSS", @@ -7169,13 +7271,13 @@ "name": "DIZtools", "version": "1.0.1", "sha256": "0i42k7h82x9g0mha8ppk17h3srgfjgwb9ysnib80pkjnp59kmpa5", - "depends": ["cleaR", "config", "data_table", "logger", "magrittr", "parsedate", "R_utils"] + "depends": ["R_utils", "cleaR", "config", "data_table", "logger", "magrittr", "parsedate"] }, "DIZutils": { "name": "DIZutils", "version": "0.1.2", "sha256": "1kra2b1qbbs6yf5aqlianszqbybni4iqzks0gxg5hdmdzphzb0hb", - "depends": ["data_table", "DBI", "DIZtools", "Hmisc", "psych", "RJDBC", "RJSONIO", "RPostgres", "xml2"] + "depends": ["DBI", "DIZtools", "Hmisc", "RJDBC", "RJSONIO", "RPostgres", "data_table", "psych", "xml2"] }, "DIconvex": { "name": "DIconvex", @@ -7193,19 +7295,19 @@ "name": "DImodelsMulti", "version": "1.1.1", "sha256": "1av5kfvshy05xqipp4qa5fhj4yd55wfpznx91l2fgdklxbnjr0v4", - "depends": ["DImodels", "dplyr", "knitr", "Matrix", "nlme", "plyr", "reshape2"] + "depends": ["DImodels", "Matrix", "dplyr", "knitr", "nlme", "plyr", "reshape2"] }, "DImodelsVis": { "name": "DImodelsVis", "version": "1.0.1", "sha256": "1j224j3xj1scf1smy2zk0dwv3calkx3jzpn989w9hjck96x657n5", - "depends": ["cli", "DImodels", "dplyr", "forcats", "ggfortify", "ggplot2", "ggtext", "glue", "insight", "metR", "PieGlyph", "plotwidgets", "rlang", "scales", "tidyr"] + "depends": ["DImodels", "PieGlyph", "cli", "dplyr", "forcats", "ggfortify", "ggplot2", "ggtext", "glue", "insight", "metR", "plotwidgets", "rlang", "scales", "tidyr"] }, "DIscBIO": { "name": "DIscBIO", "version": "1.2.2", "sha256": "0zr1lpfqn8q3xhh27aa59j5xq70fxhzkwqaqfi34zfsiqzb7cy6a", - "depends": ["AnnotationDbi", "cluster", "fpc", "ggplot2", "httr", "igraph", "impute", "mclust", "NetIndices", "org_Hs_eg_db", "png", "RColorBrewer", "rpart", "rpart_plot", "RWeka", "SingleCellExperiment", "statmod", "TSCAN", "tsne", "vegan", "withr"] + "depends": ["AnnotationDbi", "NetIndices", "RColorBrewer", "RWeka", "SingleCellExperiment", "TSCAN", "cluster", "fpc", "ggplot2", "httr", "igraph", "impute", "mclust", "org_Hs_eg_db", "png", "rpart", "rpart_plot", "statmod", "tsne", "vegan", "withr"] }, "DJL": { "name": "DJL", @@ -7229,13 +7331,13 @@ "name": "DLL", "version": "1.0.0", "sha256": "00xj6r1i4qhv0lq9ky88pw26nkc3ywhl23j9rsh2z5jn4dqpwpcg", - "depends": ["glmnet", "locpol", "MASS", "SAM"] + "depends": ["MASS", "SAM", "glmnet", "locpol"] }, "DLMtool": { "name": "DLMtool", "version": "6.0.6", "sha256": "1lhskk4022vzvmwki08jkwpz3scirbdr0imkpzb9dqfhvmsdyafx", - "depends": ["dplyr", "ggplot2", "MSEtool", "Rcpp", "RcppEigen", "TMB"] + "depends": ["MSEtool", "Rcpp", "RcppEigen", "TMB", "dplyr", "ggplot2"] }, "DLPCA": { "name": "DLPCA", @@ -7243,12 +7345,6 @@ "sha256": "1fjpkn32rx8m18k6pr2cf180wqr01f9kviqibwsghnkrhbzcgpiy", "depends": [] }, - "DMCfun": { - "name": "DMCfun", - "version": "3.5.4", - "sha256": "0kw0hzg5hwj76yz02ws62dmji7ggjm5isnh4blfhw55fsn7b6aic", - "depends": ["BH", "DEoptim", "dplyr", "pbapply", "Rcpp", "tidyr"] - }, "DMMF": { "name": "DMMF", "version": "0.5.2.0", @@ -7283,13 +7379,13 @@ "name": "DMwR2", "version": "0.0.2", "sha256": "1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9", - "depends": ["class", "DBI", "dplyr", "quantmod", "readr", "rpart", "xts", "zoo"] + "depends": ["DBI", "class", "dplyr", "quantmod", "readr", "rpart", "xts", "zoo"] }, "DNAmixturesLite": { "name": "DNAmixturesLite", "version": "0.0-1", "sha256": "14f373an89ra7v2q3mlc4s7svriydzs7jp8zp3arsbg4ali1g037", - "depends": ["gRaven", "gRbase", "Matrix", "numDeriv", "Rsolnp"] + "depends": ["Matrix", "Rsolnp", "gRaven", "gRbase", "numDeriv"] }, "DNAmotif": { "name": "DNAmotif", @@ -7307,7 +7403,7 @@ "name": "DNAtools", "version": "0.2-4", "sha256": "1xcpp5jw5xq6a6ccq8jsd4d7ailv3iv8k7b1bbz531vhy9im2dzs", - "depends": ["multicool", "Rcpp", "RcppParallel", "RcppProgress", "Rsolnp"] + "depends": ["Rcpp", "RcppParallel", "RcppProgress", "Rsolnp", "multicool"] }, "DNH4": { "name": "DNH4", @@ -7319,13 +7415,13 @@ "name": "DNLC", "version": "1.0.0", "sha256": "05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00", - "depends": ["caTools", "fdrtool", "GOstats", "igraph", "locfdr", "mvtnorm", "spdep"] + "depends": ["GOstats", "caTools", "fdrtool", "igraph", "locfdr", "mvtnorm", "spdep"] }, "DNMF": { "name": "DNMF", "version": "1.4.2", "sha256": "10zzbi0jywlnq4hxqb0dh7xrn8gj75asd4yc1mcl2dbjpi68sn56", - "depends": ["doParallel", "foreach", "gplots", "Matrix"] + "depends": ["Matrix", "doParallel", "foreach", "gplots"] }, "DNetFinder": { "name": "DNetFinder", @@ -7391,13 +7487,13 @@ "name": "DPBBM", "version": "0.2.5", "sha256": "1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2", - "depends": ["CEoptim", "gplots", "tmvtnorm", "VGAM"] + "depends": ["CEoptim", "VGAM", "gplots", "tmvtnorm"] }, "DPP": { "name": "DPP", "version": "0.1.2", "sha256": "1qalcm4gwh03qpy07d0p323ccq8xmk04v6z30g7wg6ic613bqg7m", - "depends": ["coda", "Rcpp"] + "depends": ["Rcpp", "coda"] }, "DPQ": { "name": "DPQ", @@ -7409,55 +7505,55 @@ "name": "DPQmpfr", "version": "0.3-2", "sha256": "0inj9i876bx2d9pvbazl0q1x2anc4raknay4y9iqkqskm72pwkvp", - "depends": ["DPQ", "gmp", "Rmpfr", "sfsmisc"] + "depends": ["DPQ", "Rmpfr", "gmp", "sfsmisc"] }, "DPTM": { "name": "DPTM", - "version": "1.3.8", - "sha256": "01zc74g7pyh9xbb11gisrszzdhxx1902970ka30ivzcwvi81243s", - "depends": ["BayesianTools", "coda", "MASS", "parabar", "purrr", "Rcpp", "RcppEigen"] + "version": "1.5.0", + "sha256": "1qjk6q4kx7mlzmp15gz468ky6jia3pf16jxyzjhf857z4yi5szl6", + "depends": ["BayesianTools", "MASS", "Rcpp", "RcppEigen", "coda", "parabar", "purrr"] }, "DPpack": { "name": "DPpack", "version": "0.1.0", "sha256": "1kip6n4pxpk5byjdn5m6l8s5l49dvkh78wn6n85dri0c2snkvs17", - "depends": ["dplyr", "e1071", "ggplot2", "MASS", "nloptr", "R6", "Rdpack", "rmutil"] + "depends": ["MASS", "R6", "Rdpack", "dplyr", "e1071", "ggplot2", "nloptr", "rmutil"] }, "DPtree": { "name": "DPtree", "version": "1.0.1", "sha256": "0d7zf695lwkx4gv50f08cbi3p3mjjay0qgrbmvybf9m15i4zmyd7", - "depends": ["MASS", "MCMCpack", "plyr", "Rdpack"] + "depends": ["MASS", "MCMCpack", "Rdpack", "plyr"] }, "DQAgui": { "name": "DQAgui", "version": "0.2.4", "sha256": "05qik0zm7ghrn75msrkfi20lxdk9bqjvwwf765ajpfaph5wmmxk5", - "depends": ["data_table", "daterangepicker", "DIZtools", "DIZutils", "DQAstats", "DT", "jsonlite", "knitr", "lubridate", "magrittr", "parsedate", "shiny", "shinyalert", "shinydashboard", "shinyFiles", "shinyjs", "shinyWidgets", "waiter"] + "depends": ["DIZtools", "DIZutils", "DQAstats", "DT", "data_table", "daterangepicker", "jsonlite", "knitr", "lubridate", "magrittr", "parsedate", "shiny", "shinyFiles", "shinyWidgets", "shinyalert", "shinydashboard", "shinyjs", "waiter"] }, "DQAstats": { "name": "DQAstats", "version": "0.3.5", "sha256": "0slp3kq2g4djdfxqx40afxcycyncmdxw757pyrm8anfnpxx4rdvz", - "depends": ["data_table", "DIZtools", "DIZutils", "future", "future_apply", "jsonlite", "kableExtra", "knitr", "magrittr", "parsedate", "quarto", "tinytex"] + "depends": ["DIZtools", "DIZutils", "data_table", "future", "future_apply", "jsonlite", "kableExtra", "knitr", "magrittr", "parsedate", "quarto", "tinytex"] }, "DR_SC": { "name": "DR.SC", "version": "3.4", "sha256": "076halm823dlrj95hqq3ibdb645vd2w68mixi36wdnh7ngr7ih1f", - "depends": ["CompQuadForm", "cowplot", "ggplot2", "GiRaF", "irlba", "MASS", "Matrix", "mclust", "purrr", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "Seurat", "spatstat_geom"] + "depends": ["CompQuadForm", "GiRaF", "MASS", "Matrix", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "Seurat", "cowplot", "ggplot2", "irlba", "mclust", "purrr", "spatstat_geom"] }, "DRAYL": { "name": "DRAYL", "version": "1.0", "sha256": "0cf5pyx6nwh8srdylpnmymv3dr67fm6qqpwd1hvj1wmyfc8fznpp", - "depends": ["cubature", "pracma", "RConics", "rmutil"] + "depends": ["RConics", "cubature", "pracma", "rmutil"] }, "DRDID": { "name": "DRDID", - "version": "1.0.6", - "sha256": "1grhnk0b6v5c31497mfr9b4n2fn3flkw40r3lznhxgn2psphpjz7", - "depends": ["BMisc", "trust"] + "version": "1.0.7", + "sha256": "0a4hp5ngwjgdfphphdpp09g08wrfx130wdqngaza468kv8zp7prf", + "depends": ["BMisc", "Rcpp", "trust"] }, "DRDRtest": { "name": "DRDRtest", @@ -7487,7 +7583,7 @@ "name": "DRR", "version": "0.0.4", "sha256": "1y70si1gig4l7jx5jiqsqliyywfsvimkx53x3zh1lc3yj2j6bqwk", - "depends": ["CVST", "kernlab", "Matrix"] + "depends": ["CVST", "Matrix", "kernlab"] }, "DRaWR": { "name": "DRaWR", @@ -7499,7 +7595,7 @@ "name": "DRomics", "version": "2.5-2", "sha256": "0nzxrsgid7w63ybya389nqn8bqkbp29fiz2g6v3nhk5l2hr001p6", - "depends": ["DESeq2", "ggfortify", "ggplot2", "limma", "rlang", "SummarizedExperiment"] + "depends": ["DESeq2", "SummarizedExperiment", "ggfortify", "ggplot2", "limma", "rlang"] }, "DRquality": { "name": "DRquality", @@ -7511,25 +7607,25 @@ "name": "DRviaSPCN", "version": "0.1.4", "sha256": "1m111n2ycr5z3dy3mhkyxfw0fq74lny0kajk91d0klcpixfv7y2g", - "depends": ["ChemmineR", "clusterProfiler", "GSVA", "igraph", "pheatmap", "sp"] + "depends": ["ChemmineR", "GSVA", "clusterProfiler", "igraph", "pheatmap", "sp"] }, "DSAIDE": { "name": "DSAIDE", "version": "0.9.6", "sha256": "01yljprcwkq0n7w9yr1xlkajyzyd0n8kmxkj80wcldp5mvqjmyxd", - "depends": ["adaptivetau", "deSolve", "dplyr", "ggplot2", "gridExtra", "lhs", "nloptr", "plotly", "rlang", "shiny", "XML"] + "depends": ["XML", "adaptivetau", "deSolve", "dplyr", "ggplot2", "gridExtra", "lhs", "nloptr", "plotly", "rlang", "shiny"] }, "DSAIRM": { "name": "DSAIRM", "version": "0.9.6", "sha256": "0zp5dcfdzrywp252d1dcyvaxn8lygqs7hzxk0v9yzgahrbxnlvw9", - "depends": ["adaptivetau", "boot", "deSolve", "dplyr", "ggplot2", "gridExtra", "lhs", "nloptr", "plotly", "rlang", "shiny", "XML"] + "depends": ["XML", "adaptivetau", "boot", "deSolve", "dplyr", "ggplot2", "gridExtra", "lhs", "nloptr", "plotly", "rlang", "shiny"] }, "DSAM": { "name": "DSAM", "version": "1.0.2", "sha256": "1bm7wicpq372xnwlib18434cid90vy575zc4f4xgsy2vsm8f87ym", - "depends": ["caret", "kohonen", "Matrix", "pROC", "xgboost"] + "depends": ["Matrix", "caret", "kohonen", "pROC", "xgboost"] }, "DSBayes": { "name": "DSBayes", @@ -7541,7 +7637,7 @@ "name": "DSI", "version": "1.6.0", "sha256": "0i8035zw2a8d8l9qm4zcm73102k89sifma3pdk3q6mdm1iqgxjxg", - "depends": ["progress", "R6"] + "depends": ["R6", "progress"] }, "DSL": { "name": "DSL", @@ -7557,9 +7653,9 @@ }, "DSMolgenisArmadillo": { "name": "DSMolgenisArmadillo", - "version": "2.0.5", - "sha256": "0bz0gkymd49sswwkj9hq9b6d0dcny74r70fsbpr2s189j5kx98ns", - "depends": ["base64enc", "DSI", "httr", "MolgenisAuth", "stringr", "urltools"] + "version": "2.0.9", + "sha256": "0myhpkblj8dl1csqd91wk7xr4zvnk400ygqbwbajayjn6l7dvqmd", + "depends": ["DSI", "MolgenisAuth", "base64enc", "dplyr", "httr", "jsonlite", "stringr", "urltools"] }, "DSOpal": { "name": "DSOpal", @@ -7577,13 +7673,13 @@ "name": "DSSP", "version": "0.1.1", "sha256": "1z4sfqlgqwhxhm8aryv5c3vlzamn9nx2c49dyi1axq4qpy7dg3pr", - "depends": ["mcmcse", "posterior", "Rcpp", "RcppArmadillo", "rust", "sp"] + "depends": ["Rcpp", "RcppArmadillo", "mcmcse", "posterior", "rust", "sp"] }, "DSWE": { "name": "DSWE", "version": "1.8.2", "sha256": "0xbhbiiq0mhqspxlgzlnrq2zm3gnb8n4rj285rdgq4cbpmfrly6l", - "depends": ["dplyr", "e1071", "FNN", "gss", "KernSmooth", "matrixStats", "mixtools", "Rcpp", "RcppArmadillo", "xgboost"] + "depends": ["FNN", "KernSmooth", "Rcpp", "RcppArmadillo", "dplyr", "e1071", "gss", "matrixStats", "mixtools", "xgboost"] }, "DSjobtracker": { "name": "DSjobtracker", @@ -7607,7 +7703,7 @@ "name": "DTAT", "version": "0.3-7", "sha256": "0rh09bdygqwzdlx0girs2ir5dy3jd3r2m4xia46njxvh3jld5vsg", - "depends": ["data_table", "dplyr", "Hmisc", "jsonlite", "km_ci", "pomp", "r2d3", "shiny", "survival"] + "depends": ["Hmisc", "data_table", "dplyr", "jsonlite", "km_ci", "pomp", "r2d3", "shiny", "survival"] }, "DTAXG": { "name": "DTAXG", @@ -7625,7 +7721,7 @@ "name": "DTComPair", "version": "1.2.4", "sha256": "1p1s0fslylykhmvwc962jcifkbb77ah0lxah596akvxlyrqkjpqk", - "depends": ["ellipse", "gee", "PropCIs"] + "depends": ["PropCIs", "ellipse", "gee"] }, "DTDA": { "name": "DTDA", @@ -7637,7 +7733,7 @@ "name": "DTDA.cif", "version": "1.0.2", "sha256": "12vkhqxdhir06s35kr76dwns9m02wyicz3mv4r56fqglsfyw77xr", - "depends": ["doParallel", "foreach", "Rcpp"] + "depends": ["Rcpp", "doParallel", "foreach"] }, "DTDA_ni": { "name": "DTDA.ni", @@ -7661,13 +7757,13 @@ "name": "DTRlearn2", "version": "1.1", "sha256": "0l756zb1wkpa1z5zjkc8jndmh2630gckxxfqslabzjmgsjf7fjgm", - "depends": ["foreach", "glmnet", "kernlab", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "foreach", "glmnet", "kernlab"] }, "DTRreg": { "name": "DTRreg", "version": "2.2", "sha256": "1irgkrar8m0xy97y19j48s8ab9y4cjzbbnhk3mhqbbs2qgam92cw", - "depends": ["nnet", "R6"] + "depends": ["R6", "nnet"] }, "DTSEA": { "name": "DTSEA", @@ -7679,7 +7775,7 @@ "name": "DTSg", "version": "1.1.3", "sha256": "0gln3zliljhs7rmqbyi7nbrzknc4g7psk9rwnd5xh020fa2k2cm1", - "depends": ["checkmate", "data_table", "R6"] + "depends": ["R6", "checkmate", "data_table"] }, "DTWBI": { "name": "DTWBI", @@ -7691,7 +7787,7 @@ "name": "DTWUMI", "version": "1.0", "sha256": "0pybgbfs2yp2ljbs0kra5z70x3llkiwdngp6cadgs3j9rar4vq4q", - "depends": ["dtw", "DTWBI", "e1071", "entropy", "lsa", "rlist"] + "depends": ["DTWBI", "dtw", "e1071", "entropy", "lsa", "rlist"] }, "DTwrappers": { "name": "DTwrappers", @@ -7703,13 +7799,13 @@ "name": "DTwrappers2", "version": "0.0.3", "sha256": "06dz7i5hddqwj307fmkp93v7c4r0nvbi3bi9j4hqx77z7bdy2m8j", - "depends": ["data_table", "DTwrappers"] + "depends": ["DTwrappers", "data_table"] }, "DVHmetrics": { "name": "DVHmetrics", "version": "0.4.2", "sha256": "0dxbjqiqhzjrv867qhxmqavzklq0j3qjv4qwdacyrq8faz82vhv7", - "depends": ["DT", "ggplot2", "KernSmooth", "reshape2", "shiny"] + "depends": ["DT", "KernSmooth", "ggplot2", "reshape2", "shiny"] }, "DWDLargeR": { "name": "DWDLargeR", @@ -7721,13 +7817,13 @@ "name": "DWLS", "version": "0.1.0", "sha256": "02fd5q91shwjzc6bxqv4m8al7q1vl0mah6niymij37p69wlixy42", - "depends": ["dplyr", "e1071", "MAST", "quadprog", "reshape", "ROCR", "Seurat", "SummarizedExperiment", "varhandle"] + "depends": ["MAST", "ROCR", "Seurat", "SummarizedExperiment", "dplyr", "e1071", "quadprog", "reshape", "varhandle"] }, "DWLasso": { "name": "DWLasso", "version": "1.1", "sha256": "1i8j8wjfvg69ldr8ahz1zv3m2wgxd701iph94ad22zs9qwqfg16z", - "depends": ["glmnet", "hglasso", "Matrix"] + "depends": ["Matrix", "glmnet", "hglasso"] }, "DWreg": { "name": "DWreg", @@ -7745,7 +7841,7 @@ "name": "DYNATE", "version": "0.1", "sha256": "172lm5k0hz774a0d2s1hs86q7q50s6n4i4ba8jddy3l5a1gqkpd4", - "depends": ["data_table", "dplyr", "Matrix", "reshape2", "tibble", "tidyverse"] + "depends": ["Matrix", "data_table", "dplyr", "reshape2", "tibble", "tidyverse"] }, "DamiaNN": { "name": "DamiaNN", @@ -7793,7 +7889,7 @@ "name": "DataClean", "version": "1.0", "sha256": "0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5", - "depends": ["xlsx", "XML"] + "depends": ["XML", "xlsx"] }, "DataCombine": { "name": "DataCombine", @@ -7817,7 +7913,7 @@ "name": "DataFakeR", "version": "0.1.3", "sha256": "1a25qp627n76qi4xzj62ipiy3qs2qvajcy9inzibwymryizlr0ia", - "depends": ["dplyr", "glue", "magrittr", "purrr", "R6", "tibble", "tidygraph", "yaml"] + "depends": ["R6", "dplyr", "glue", "magrittr", "purrr", "tibble", "tidygraph", "yaml"] }, "DataGraph": { "name": "DataGraph", @@ -7833,9 +7929,9 @@ }, "DataMetProcess": { "name": "DataMetProcess", - "version": "1.0.1", - "sha256": "1dfi96l3cj1pmj747pznrp5glpibkngzwwcs8y3ihk8p1vqjj7sp", - "depends": ["dplyr", "lubridate", "rlang", "tidyr"] + "version": "1.0.2", + "sha256": "1hkp0gldpqrfjnw6cwvrmgs034kdk7igy170640zkwhcsvd6hr4a", + "depends": ["dplyr", "lubridate", "rlang", "shiny", "tidyr"] }, "DataPackageR": { "name": "DataPackageR", @@ -7853,13 +7949,13 @@ "name": "DataSpaceR", "version": "0.7.6", "sha256": "1asrslqmk4sjj99x8pb01yfrw57p64zc6klrk2ghz4g44fr9d0pq", - "depends": ["assertthat", "curl", "data_table", "digest", "httr", "jsonlite", "R6", "Rlabkey"] + "depends": ["R6", "Rlabkey", "assertthat", "curl", "data_table", "digest", "httr", "jsonlite"] }, "DataVisualizations": { "name": "DataVisualizations", "version": "1.3.2", "sha256": "0y8mwgnh3cjapb97a0i4f16nrdhmkd80f6j7z0ivykgfka7jlbqr", - "depends": ["ggplot2", "pracma", "Rcpp", "RcppArmadillo", "reshape2", "sp"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "pracma", "reshape2", "sp"] }, "DataViz": { "name": "DataViz", @@ -7871,7 +7967,7 @@ "name": "DatabaseConnector", "version": "6.3.2", "sha256": "1wl78a2jlyqdbdkq1bhw2ymv6d0dn6d38vym80khhclial76rnzp", - "depends": ["bit64", "checkmate", "DBI", "dbplyr", "digest", "readr", "rJava", "rlang", "SqlRender", "stringr", "urltools"] + "depends": ["DBI", "SqlRender", "bit64", "checkmate", "dbplyr", "digest", "rJava", "readr", "rlang", "stringr", "urltools"] }, "DatabaseConnectorJars": { "name": "DatabaseConnectorJars", @@ -7881,9 +7977,9 @@ }, "DatabionicSwarm": { "name": "DatabionicSwarm", - "version": "1.2.1", - "sha256": "1qdm4na1s4wc8s7j9vp8g8l9lmhqlpzyafkjmm9jzl7wqlgz5ibr", - "depends": ["deldir", "GeneralizedUmatrix", "Rcpp", "RcppArmadillo", "RcppParallel"] + "version": "2.0.0", + "sha256": "1z5amn9b5pgnp58chlqcmz82sdvkmv1682vfy965kh53187gfn20", + "depends": ["ABCanalysis", "GeneralizedUmatrix", "Rcpp", "RcppArmadillo", "RcppParallel", "deldir", "ggplot2"] }, "DatastreamDSWS2R": { "name": "DatastreamDSWS2R", @@ -7913,13 +8009,13 @@ "name": "DeBoinR", "version": "1.0", "sha256": "0brwk24q2wgmn38y1w1rish8dfdbv10xdzmm2k1drdwgsn72hxis", - "depends": ["dplyr", "ggplot2", "gridExtra", "KernSmooth", "pracma"] + "depends": ["KernSmooth", "dplyr", "ggplot2", "gridExtra", "pracma"] }, "DeCAFS": { "name": "DeCAFS", "version": "3.3.3", "sha256": "0dj32rck6ssyv82d8b75qgsqw319q02iqd3xxazy6251wcjn321i", - "depends": ["ggplot2", "Rcpp", "robustbase"] + "depends": ["Rcpp", "ggplot2", "robustbase"] }, "DeRezende_Ferreira": { "name": "DeRezende.Ferreira", @@ -7931,7 +8027,7 @@ "name": "DebiasInfer", "version": "0.2", "sha256": "02r1pc5s1vwnvz6cxb2gkc3x4x9vw8nb2zw1z8hyyxp5n8n8d2mf", - "depends": ["caret", "CVXR"] + "depends": ["CVXR", "caret"] }, "DeclareDesign": { "name": "DeclareDesign", @@ -7943,19 +8039,19 @@ "name": "DecomposeR", "version": "1.0.6", "sha256": "0f5bagmn0s15qhw0c7fiv96r2ih365fak1rz3pxfnaqmm20l2j8i", - "depends": ["colorRamps", "dplyr", "hexbin", "StratigrapheR", "tictoc", "usethis"] + "depends": ["StratigrapheR", "colorRamps", "dplyr", "hexbin", "tictoc", "usethis"] }, "DecorateR": { "name": "DecorateR", "version": "0.1.2", "sha256": "1za2qvdq96f75rmnm421xmq8s01ny4666ghv14i72iy3s4ml2hq9", - "depends": ["rJava", "RWeka", "RWekajars"] + "depends": ["RWeka", "RWekajars", "rJava"] }, "Deducer": { "name": "Deducer", "version": "0.7-9", "sha256": "14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6", - "depends": ["car", "e1071", "effects", "foreign", "ggplot2", "JGR", "MASS", "multcomp", "plyr", "rJava", "scales"] + "depends": ["JGR", "MASS", "car", "e1071", "effects", "foreign", "ggplot2", "multcomp", "plyr", "rJava", "scales"] }, "DeductiveR": { "name": "DeductiveR", @@ -7963,10 +8059,16 @@ "sha256": "0bx1ad2gw0pf03z0im31mzaa26jxwws6fkbcj319kd8b4s4wp92y", "depends": ["dplyr", "ggplot2", "moments", "reshape2"] }, + "DeepLearningCausal": { + "name": "DeepLearningCausal", + "version": "0.0.104", + "sha256": "02n0prw6g0sslxwr3p5msbcqr2bny702pbf22vs6f0f9xc5gqkd6", + "depends": ["Hmisc", "ROCR", "SuperLearner", "caret", "class", "e1071", "gam", "gbm", "glmnet", "neuralnet", "randomForest", "weights", "xgboost"] + }, "Delaporte": { "name": "Delaporte", - "version": "8.4.0", - "sha256": "1jqz2qxig35rhmwvazmsl3a081dylfq2jfz3bjpj61y4c55mnwar", + "version": "8.4.1", + "sha256": "1gv0js21x5sh54vjkvyh41ph1ixk1nw7ajm111fwz95prd9wx04v", "depends": [] }, "DelayedEffect_Design": { @@ -7997,7 +8099,7 @@ "name": "DemoKin", "version": "1.0.3", "sha256": "0ph60ifffg29a88f9qxkx6zvcv8rxl1q5wd39j5zz2fqm3ggz47v", - "depends": ["data_table", "dplyr", "igraph", "lifecycle", "magrittr", "MASS", "Matrix", "matrixcalc", "progress", "purrr", "tidyr"] + "depends": ["MASS", "Matrix", "data_table", "dplyr", "igraph", "lifecycle", "magrittr", "matrixcalc", "progress", "purrr", "tidyr"] }, "DemografixeR": { "name": "DemografixeR", @@ -8033,7 +8135,7 @@ "name": "DepCens", "version": "0.2.3", "sha256": "0sz7bj6pqwj6appyymajav0q5g1hrpaa8m75rx4drfjdp0lv7ihq", - "depends": ["dlm", "Formula", "matrixStats", "rootSolve", "survival"] + "depends": ["Formula", "dlm", "matrixStats", "rootSolve", "survival"] }, "DepLogo": { "name": "DepLogo", @@ -8045,7 +8147,7 @@ "name": "DepthProc", "version": "2.1.5", "sha256": "0i7fks5hglf3xj8cj3sghjf0xcldhiqwf0jlpyk2a3mj9gaszc76", - "depends": ["colorspace", "geometry", "ggplot2", "lattice", "MASS", "np", "Rcpp", "RcppArmadillo", "rrcov", "sm", "zoo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "colorspace", "geometry", "ggplot2", "lattice", "np", "rrcov", "sm", "zoo"] }, "Deriv": { "name": "Deriv", @@ -8055,21 +8157,21 @@ }, "DescTools": { "name": "DescTools", - "version": "0.99.54", - "sha256": "16qbm1l1281yj1cg6fp8xgd8xdshpz9a09f0b9cyimsjbm01c2j7", - "depends": ["boot", "cli", "data_table", "Exact", "expm", "gld", "httr", "MASS", "mvtnorm", "Rcpp", "readxl", "rstudioapi", "withr"] + "version": "0.99.55", + "sha256": "07dgif06kl2p2qzcg827y05al1k1qy21a5gkz24jbd6xds161mg5", + "depends": ["Exact", "MASS", "Rcpp", "boot", "cli", "data_table", "expm", "gld", "httr", "mvtnorm", "readxl", "rstudioapi", "withr"] }, "DescToolsAddIns": { "name": "DescToolsAddIns", - "version": "1.10", - "sha256": "0wgcfrxf2vygr7rylkbfzlgldg6llg4k4bzwrq8c73miwac158js", + "version": "1.11", + "sha256": "160xd95njj1pk11grdrs2mzx1h98q8fin46yg8jiyi16rlyvxm4l", "depends": ["DescTools", "foreign", "manipulate", "rstudioapi", "writexl"] }, "DescrTab2": { "name": "DescrTab2", "version": "2.1.16", "sha256": "07921k8h50wycj0sijy8428p3c8ach90swgzz0s06b6z1yl2mnyg", - "depends": ["cli", "DescTools", "dplyr", "exact2x2", "flextable", "forcats", "haven", "Hmisc", "kableExtra", "knitr", "magrittr", "nlme", "officer", "rlang", "rmarkdown", "scales", "stringr", "tibble"] + "depends": ["DescTools", "Hmisc", "cli", "dplyr", "exact2x2", "flextable", "forcats", "haven", "kableExtra", "knitr", "magrittr", "nlme", "officer", "rlang", "rmarkdown", "scales", "stringr", "tibble"] }, "DescribeDF": { "name": "DescribeDF", @@ -8093,7 +8195,7 @@ "name": "DescriptiveStats.OBeu", "version": "1.3.2", "sha256": "0f2inlfkwl2q9ll5lh0ynpsbf6zci149s5nj0s0x0g98z72z8mly", - "depends": ["dplyr", "jsonlite", "magrittr", "RCurl", "reshape"] + "depends": ["RCurl", "dplyr", "jsonlite", "magrittr", "reshape"] }, "DescriptiveWH": { "name": "DescriptiveWH", @@ -8129,13 +8231,13 @@ "name": "DetMCD", "version": "0.0.5", "sha256": "034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5", - "depends": ["pcaPP", "Rcpp", "RcppEigen", "robustbase"] + "depends": ["Rcpp", "RcppEigen", "pcaPP", "robustbase"] }, "DetR": { "name": "DetR", "version": "0.0.5", "sha256": "1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9", - "depends": ["MASS", "pcaPP", "Rcpp", "RcppEigen", "robustbase"] + "depends": ["MASS", "Rcpp", "RcppEigen", "pcaPP", "robustbase"] }, "DevTreatRules": { "name": "DevTreatRules", @@ -8147,7 +8249,7 @@ "name": "Devore7", "version": "0.7.6", "sha256": "1m18p8h9vv4v0aq2fkjyj39vzb8a09azbbczhfiv4y88w540i8nw", - "depends": ["lattice", "MASS"] + "depends": ["MASS", "lattice"] }, "Dforest": { "name": "Dforest", @@ -8171,7 +8273,7 @@ "name": "DiPALM", "version": "1.2", "sha256": "0y6nzf7lkf0znp88r7k0myf5k1c7cqcc2gh5kgzj5q8savhr90ax", - "depends": ["ggplot2", "limma", "WGCNA"] + "depends": ["WGCNA", "ggplot2", "limma"] }, "DiPhiSeq": { "name": "DiPhiSeq", @@ -8187,9 +8289,9 @@ }, "DiSCos": { "name": "DiSCos", - "version": "0.1.0", - "sha256": "0n74v8r14ny1njbvlbbm4i275x7x923aw2v2wqag6d4q38w5237g", - "depends": ["CVXR", "data_table", "evmix", "extremeStat", "ggplot2", "MASS", "pracma", "Rdpack"] + "version": "0.1.1", + "sha256": "0xwbiaqmlp7bpnkagadc87ay7shp9gls7d6vhi7ksws9r03134sm", + "depends": ["CVXR", "MASS", "Rdpack", "data_table", "evmix", "extremeStat", "ggplot2", "pracma"] }, "DiSSMod": { "name": "DiSSMod", @@ -8201,7 +8303,7 @@ "name": "DiagrammeR", "version": "1.0.11", "sha256": "1py4yii88lsyj8y71d2v0rb9lk5hvhfh0q8n2q4288wqw7bf6wz8", - "depends": ["cli", "dplyr", "glue", "htmltools", "htmlwidgets", "igraph", "magrittr", "purrr", "RColorBrewer", "readr", "rlang", "rstudioapi", "scales", "stringr", "tibble", "tidyr", "viridisLite", "visNetwork"] + "depends": ["RColorBrewer", "cli", "dplyr", "glue", "htmltools", "htmlwidgets", "igraph", "magrittr", "purrr", "readr", "rlang", "rstudioapi", "scales", "stringr", "tibble", "tidyr", "viridisLite", "visNetwork"] }, "DiagrammeRsvg": { "name": "DiagrammeRsvg", @@ -8243,13 +8345,13 @@ "name": "DiceView", "version": "2.2-0", "sha256": "1a7jlj7nmj41zfmpb54iwi8c9g44d376cc353ybr8dq8vkyq0vss", - "depends": ["DiceDesign", "foreach", "geometry", "R_cache", "scatterplot3d"] + "depends": ["DiceDesign", "R_cache", "foreach", "geometry", "scatterplot3d"] }, "Dict": { "name": "Dict", "version": "0.1.0", "sha256": "1v8yp03gajg9i82qyfww14jx93l4jbfq8mh6jqyf6calgrsj06jc", - "depends": ["dplyr", "magrittr", "purrr", "R6", "rlang"] + "depends": ["R6", "dplyr", "magrittr", "purrr", "rlang"] }, "DidacticBoost": { "name": "DidacticBoost", @@ -8261,7 +8363,7 @@ "name": "Diderot", "version": "0.13", "sha256": "04d1drxn99r0fqq3zym7yyip9c8rfqhghq20q4zyb42l3hfgv9ai", - "depends": ["data_table", "doParallel", "foreach", "igraph", "RCurl", "splitstackshape", "stringi"] + "depends": ["RCurl", "data_table", "doParallel", "foreach", "igraph", "splitstackshape", "stringi"] }, "DiffCorr": { "name": "DiffCorr", @@ -8273,13 +8375,13 @@ "name": "DiffNet", "version": "1.0.2", "sha256": "1hil8p896vckgwmlr8vqkrwswclwh1hs8gxvk648gpahi1na1ssc", - "depends": ["assertthat", "igraph", "MASS"] + "depends": ["MASS", "assertthat", "igraph"] }, "DiffXTables": { "name": "DiffXTables", "version": "0.1.3", "sha256": "0a0q1fz80jlcrk4rw70yjb8djxgsm5axih45vi4dqpg6n8xlrzw2", - "depends": ["pander", "Rdpack"] + "depends": ["Rdpack", "pander"] }, "DirStats": { "name": "DirStats", @@ -8291,7 +8393,7 @@ "name": "Dire", "version": "2.2.0", "sha256": "140qqpp0vhqw0vmzff58sx51nj21x61z063j4j23nrdrl3ylamcv", - "depends": ["foreach", "haven", "iterators", "lbfgs", "MASS", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "foreach", "haven", "iterators", "lbfgs"] }, "DirectEffects": { "name": "DirectEffects", @@ -8313,9 +8415,9 @@ }, "Directional": { "name": "Directional", - "version": "6.6", - "sha256": "0fgwhah78psgd7fhjgk9rw1hyhfx9qbj93bznsjs6dhjkp9wyn4q", - "depends": ["bigstatsr", "doParallel", "foreach", "ggplot2", "magrittr", "Rfast", "Rfast2", "rgl", "Rnanoflann", "rnaturalearth", "sf"] + "version": "6.7", + "sha256": "1i9dwk1r44b47insw5iz5vgk7g9zi78wlix2cv2g02phcrz5wqa2", + "depends": ["Rfast", "Rfast2", "Rnanoflann", "bigstatsr", "doParallel", "foreach", "ggplot2", "magrittr", "rgl", "rnaturalearth", "sf"] }, "DirichletReg": { "name": "DirichletReg", @@ -8333,13 +8435,13 @@ "name": "DisImpact", "version": "0.0.21", "sha256": "1vc2kwcb3cvcdbdg0s5qnjdzn8qa7lv6f86milhxdf609k2zwdkx", - "depends": ["collapse", "data_table", "DBI", "dplyr", "duckdb", "fst", "glue", "purrr", "rlang", "sets", "stringr", "tidyr", "tidyselect"] + "depends": ["DBI", "collapse", "data_table", "dplyr", "duckdb", "fst", "glue", "purrr", "rlang", "sets", "stringr", "tidyr", "tidyselect"] }, "DisaggregateTS": { "name": "DisaggregateTS", "version": "2.0.0", "sha256": "17d9mvznxysyybmnl5yz0sx15dxxry4vxpafp35s3sdlarg5jv39", - "depends": ["lars", "Matrix", "Rdpack", "withr", "zoo"] + "depends": ["Matrix", "Rdpack", "lars", "withr", "zoo"] }, "DiscreteDatasets": { "name": "DiscreteDatasets", @@ -8349,9 +8451,9 @@ }, "DiscreteFDR": { "name": "DiscreteFDR", - "version": "1.3.7", - "sha256": "0yph01q0aw7dfv3cmhv6mjb0vcphifzj1z9iddpw9zhkryadj7gg", - "depends": ["lifecycle", "Rcpp"] + "version": "2.0.0", + "sha256": "02yj9pfxh1f4fgij4gq29aijd42im9b6npyhw4jirdpl7zkh0j8i", + "depends": ["DiscreteDatasets", "DiscreteTests", "Rcpp", "RcppArmadillo", "checkmate", "lifecycle"] }, "DiscreteInverseWeibull": { "name": "DiscreteInverseWeibull", @@ -8373,9 +8475,9 @@ }, "DiscreteTests": { "name": "DiscreteTests", - "version": "0.1.2", - "sha256": "1f487mx818qz8bp36lnb1lpcfcia7pzmvcxhh6zh0ak0d6xllc2g", - "depends": ["checkmate", "R6"] + "version": "0.2.0", + "sha256": "18257srwfz99531wks60isi1dg95yv1xvpb4hhxh9qw9wijw08sp", + "depends": ["R6", "checkmate", "lifecycle"] }, "DiscreteWeibull": { "name": "DiscreteWeibull", @@ -8393,7 +8495,7 @@ "name": "DistPlotter", "version": "0.0.2", "sha256": "0aws4qs6802y42m07ca9m4i0lza282g6kfzx64q652y52md862gk", - "depends": ["colourpicker", "dplyr", "DT", "extraDistr", "ggplot2", "rio", "scales", "shiny", "shinyalert", "shinyBS", "shinyjs", "shinyWidgets", "stringi", "stringr"] + "depends": ["DT", "colourpicker", "dplyr", "extraDistr", "ggplot2", "rio", "scales", "shiny", "shinyBS", "shinyWidgets", "shinyalert", "shinyjs", "stringi", "stringr"] }, "Distance": { "name": "Distance", @@ -8435,7 +8537,7 @@ "name": "DivE", "version": "1.3", "sha256": "1nab00wkq2986sxi8z5hmhadxyzhy181akhzj8vc6bfznrcrnbig", - "depends": ["deSolve", "FME", "sp"] + "depends": ["FME", "deSolve", "sp"] }, "DiversificationR": { "name": "DiversificationR", @@ -8447,13 +8549,13 @@ "name": "DoE.MIParray", "version": "1.0-1", "sha256": "0ginm4wqax2azcns4c17rgdfpclbmn058nq0lmpx90s4q7jfppax", - "depends": ["combinat", "DoE_base"] + "depends": ["DoE_base", "combinat"] }, "DoE_base": { "name": "DoE.base", "version": "1.2-4", "sha256": "0lz0ilz145lhymb42b9yk4ysvm5zlbigc7ba600736cwnlgc0wn0", - "depends": ["combinat", "conf_design", "lattice", "MASS", "numbers", "partitions", "vcd"] + "depends": ["MASS", "combinat", "conf_design", "lattice", "numbers", "partitions", "vcd"] }, "DoE_wrapper": { "name": "DoE.wrapper", @@ -8483,7 +8585,7 @@ "name": "DominoDataR", "version": "0.2.3", "sha256": "1awiy32sm0n2v1z48v4agqm89jnkgqazbjh9zixmj7yd0db78a9v", - "depends": ["arrow", "ConfigParser", "httr", "reticulate"] + "depends": ["ConfigParser", "arrow", "httr", "reticulate"] }, "DoseFinding": { "name": "DoseFinding", @@ -8495,7 +8597,7 @@ "name": "DoubleCone", "version": "1.1", "sha256": "1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg", - "depends": ["coneproj", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "coneproj"] }, "DoubleExpSeq": { "name": "DoubleExpSeq", @@ -8507,31 +8609,31 @@ "name": "DoubleML", "version": "1.0.1", "sha256": "0qk7zjpzz0dpzvczssfbp4gbqxazyxn0dsc8h9jnqb3syzdscc27", - "depends": ["checkmate", "clusterGeneration", "data_table", "mlr3", "mlr3learners", "mlr3misc", "mlr3tuning", "mvtnorm", "R6", "readstata13"] + "depends": ["R6", "checkmate", "clusterGeneration", "data_table", "mlr3", "mlr3learners", "mlr3misc", "mlr3tuning", "mvtnorm", "readstata13"] }, "Dowd": { "name": "Dowd", "version": "0.12", "sha256": "1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk", - "depends": ["bootstrap", "forecast", "MASS"] + "depends": ["MASS", "bootstrap", "forecast"] }, "Dpit": { "name": "Dpit", "version": "1.0", "sha256": "02pnc00sk3bwxmxrg27638x0q62r7nsx2nr14zjjc5q880prdisv", - "depends": ["fitdistrplus", "gsl", "moments", "VGAM"] + "depends": ["VGAM", "fitdistrplus", "gsl", "moments"] }, "DrBats": { "name": "DrBats", "version": "0.1.6", "sha256": "1623h8s6y4klq8xmj480ga2wl6n4c2f26v1dwysyvcrk6lnaghdm", - "depends": ["ade4", "coda", "MASS", "Matrix", "rstan", "sde"] + "depends": ["MASS", "Matrix", "ade4", "coda", "rstan", "sde"] }, "DrDimont": { "name": "DrDimont", "version": "0.1.4", "sha256": "1ax70932zn0q21drbp8wr5xy5xjnaqvkqd2cp4cb7bl9f6bcsz9p", - "depends": ["dplyr", "igraph", "magrittr", "readr", "reticulate", "Rfast", "rlang", "stringr", "tibble", "tidyr", "WGCNA"] + "depends": ["Rfast", "WGCNA", "dplyr", "igraph", "magrittr", "readr", "reticulate", "rlang", "stringr", "tibble", "tidyr"] }, "DrImpute": { "name": "DrImpute", @@ -8559,9 +8661,9 @@ }, "DrugExposureDiagnostics": { "name": "DrugExposureDiagnostics", - "version": "1.0.5", - "sha256": "1yy8wqprvqc0sa7nxw044g5j18vy395zkbfsr8ibdnbd4hzxvgkf", - "depends": ["CDMConnector", "checkmate", "dplyr", "DrugUtilisation", "glue", "magrittr", "omopgenerics", "rlang", "tidyr", "tidyselect"] + "version": "1.0.7", + "sha256": "0m3mfnavqnx53i8p723j4mc0r20b3c21i1svrg7dclx0f2c8np8n", + "depends": ["CDMConnector", "DrugUtilisation", "checkmate", "dplyr", "glue", "magrittr", "omopgenerics", "rlang", "tidyr", "tidyselect"] }, "DrugSim2DR": { "name": "DrugSim2DR", @@ -8571,21 +8673,21 @@ }, "DrugUtilisation": { "name": "DrugUtilisation", - "version": "0.6.1", - "sha256": "1b89g84xzdq8sc9nf8vc13x97cgbz0764j21gwkzasn693rn38ym", - "depends": ["CDMConnector", "checkmate", "cli", "DBI", "dbplyr", "dplyr", "glue", "lifecycle", "lubridate", "magrittr", "omopgenerics", "PatientProfiles", "purrr", "RJSONIO", "rlang", "tictoc", "tidyr", "visOmopResults"] + "version": "0.7.0", + "sha256": "09wvw1cv0l3vcsarwiwsiyyakd2i9iw3kj13f2w4lwgw5d225cdc", + "depends": ["CDMConnector", "CodelistGenerator", "PatientProfiles", "checkmate", "cli", "clock", "dbplyr", "dplyr", "glue", "lifecycle", "omopgenerics", "purrr", "rlang", "stringr", "tidyr", "visOmopResults"] }, "DstarM": { "name": "DstarM", "version": "0.4.0", "sha256": "0wm5kr2pkgbvh9svjq8zq46zn50hwf58rs3y1ybnwcfjc2q75h1s", - "depends": ["DEoptim", "ggplot2", "Rcpp", "RcppArmadillo", "rtdists", "RWiener"] + "depends": ["DEoptim", "RWiener", "Rcpp", "RcppArmadillo", "ggplot2", "rtdists"] }, "DtD": { "name": "DtD", "version": "0.2.2", "sha256": "1czspjdxjhbfk2df7wk0x3d1ilwrjqw4s4gdc4hq0gjcjqyx0c39", - "depends": ["checkmate", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "checkmate"] }, "Dtableone": { "name": "Dtableone", @@ -8597,7 +8699,7 @@ "name": "Durga", "version": "2.0", "sha256": "0iq29ga1cn5fnnj1b90pprqcldygmy695si0vq4pr8d59q029ah9", - "depends": ["boot", "RColorBrewer", "vipor"] + "depends": ["RColorBrewer", "boot", "vipor"] }, "DyMEP": { "name": "DyMEP", @@ -8609,7 +8711,7 @@ "name": "DySS", "version": "1.0", "sha256": "1aa67m224bhzzg089rhxwqgbmwwq5py8ikix8khwraz5cnjz2f83", - "depends": ["ggplot2", "gridExtra", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra"] }, "Dykstra": { "name": "Dykstra", @@ -8627,7 +8729,7 @@ "name": "DynForest", "version": "1.1.3", "sha256": "0x78gbgzl4dad5g6w27cdfpngsykanv3lz3xffpqndd971wkzhiy", - "depends": ["cmprsk", "DescTools", "doParallel", "doRNG", "foreach", "ggplot2", "lcmm", "pbapply", "pec", "prodlim", "stringr", "survival", "zoo"] + "depends": ["DescTools", "cmprsk", "doParallel", "doRNG", "foreach", "ggplot2", "lcmm", "pbapply", "pec", "prodlim", "stringr", "survival", "zoo"] }, "DynNom": { "name": "DynNom", @@ -8663,7 +8765,7 @@ "name": "DysPIA", "version": "1.3", "sha256": "0ih8sl89h6xbmmjjsbxcvgp6wqk7f1wqzwkc43k3i5w7fgb0hlpc", - "depends": ["BiocParallel", "data_table", "DysPIAData", "fastmatch", "parmigene", "Rcpp"] + "depends": ["BiocParallel", "DysPIAData", "Rcpp", "data_table", "fastmatch", "parmigene"] }, "DysPIAData": { "name": "DysPIAData", @@ -8675,7 +8777,7 @@ "name": "E4tools", "version": "0.1.1", "sha256": "1kmj1fddybjia9ninhcy75kdmq152zjw7s24chpqr5wsblffr3yx", - "depends": ["accelerometry", "anytime", "BBmisc", "chron", "data_table", "DataCombine", "doParallel", "doSNOW", "foreach", "ggplot2", "hms", "scales", "signal"] + "depends": ["BBmisc", "DataCombine", "accelerometry", "anytime", "chron", "data_table", "doParallel", "doSNOW", "foreach", "ggplot2", "hms", "scales", "signal"] }, "EATME": { "name": "EATME", @@ -8687,13 +8789,13 @@ "name": "EAinference", "version": "0.2.3", "sha256": "1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4", - "depends": ["hdi", "limSolve", "MASS", "msm", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "hdi", "limSolve", "msm", "mvtnorm"] }, "EBASE": { "name": "EBASE", "version": "1.0.2", "sha256": "0y36xsh639chsrzb3r6kla6mi34klrqb4x05ixhk4kh4jx2rb63i", - "depends": ["dplyr", "foreach", "ggplot2", "lubridate", "R2jags", "rjags", "tidyr", "truncnorm", "zoo"] + "depends": ["R2jags", "dplyr", "foreach", "ggplot2", "lubridate", "rjags", "tidyr", "truncnorm", "zoo"] }, "EBCHS": { "name": "EBCHS", @@ -8711,13 +8813,13 @@ "name": "EBMAforecast", "version": "1.0.32", "sha256": "01pv873d0sl0qzlgmqw4ahg5ym9gdjzbmzqlg593g5l935r3dgi4", - "depends": ["abind", "glue", "gtools", "Hmisc", "plyr", "Rcpp", "separationplot"] + "depends": ["Hmisc", "Rcpp", "abind", "glue", "gtools", "plyr", "separationplot"] }, "EBPRS": { "name": "EBPRS", "version": "2.1.0", "sha256": "14wal81cai08xr26fpc2w4ramr5jyv7vwfyqb5hzw3kqxx76y9xx", - "depends": ["BEDMatrix", "data_table", "ROCR"] + "depends": ["BEDMatrix", "ROCR", "data_table"] }, "EBglmnet": { "name": "EBglmnet", @@ -8753,13 +8855,13 @@ "name": "ECOTOXr", "version": "1.0.9", "sha256": "0n5vfzg2drffw7yrbvi1rkhkydsmyd8v0scqqrx0cdx84y21l5fl", - "depends": ["crayon", "dbplyr", "dplyr", "httr2", "jsonlite", "lifecycle", "purrr", "rappdirs", "readr", "readxl", "rlang", "RSQLite", "rvest", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["RSQLite", "crayon", "dbplyr", "dplyr", "httr2", "jsonlite", "lifecycle", "purrr", "rappdirs", "readr", "readxl", "rlang", "rvest", "stringr", "tibble", "tidyr", "tidyselect"] }, "ECTSVR": { "name": "ECTSVR", "version": "0.1.0", "sha256": "1l4j1a25cssf2pindkqpzgr7a67brg5qxqk9ysy96vvbc74n8i6l", - "depends": ["urca", "vars", "WeightSVM"] + "depends": ["WeightSVM", "urca", "vars"] }, "ECTTDNN": { "name": "ECTTDNN", @@ -8777,7 +8879,7 @@ "name": "ECoL", "version": "0.3.0", "sha256": "02j4yl6hi83f6m529r6n0gaz8wsy2pi0ncy2g95fjhs8ib0kfn4f", - "depends": ["cluster", "e1071", "FNN", "igraph", "MASS"] + "depends": ["FNN", "MASS", "cluster", "e1071", "igraph"] }, "EDA": { "name": "EDA", @@ -8801,7 +8903,7 @@ "name": "EDISON", "version": "1.1.1", "sha256": "12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7", - "depends": ["corpcor", "MASS"] + "depends": ["MASS", "corpcor"] }, "EDIutils": { "name": "EDIutils", @@ -8843,25 +8945,31 @@ "name": "EEM", "version": "1.1.1", "sha256": "0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj", - "depends": ["colorRamps", "ggplot2", "R_utils", "reshape2", "sp"] + "depends": ["R_utils", "colorRamps", "ggplot2", "reshape2", "sp"] }, "EEMDSVR": { "name": "EEMDSVR", "version": "0.1.0", "sha256": "0m28rrw7lg3sx2aviqphsid2rsp7zksd3fcvk7pxfw16z90y7ifd", - "depends": ["e1071", "Rlibeemd"] + "depends": ["Rlibeemd", "e1071"] }, "EEMDelm": { "name": "EEMDelm", "version": "0.1.1", "sha256": "0riz6s53daqbhy3xif0z8brb0n4swfjxxvvdnx2wwaiwl098rmwa", - "depends": ["forecast", "nnfor", "Rlibeemd"] + "depends": ["Rlibeemd", "forecast", "nnfor"] }, "EEMDlstm": { "name": "EEMDlstm", "version": "0.1.0", "sha256": "0cilmbk100gym5kaa7fq8bx0cdqa07xk82kxgxjf4k6gyzs39nlh", - "depends": ["BiocGenerics", "keras", "magrittr", "reticulate", "Rlibeemd", "tensorflow", "TSdeeplearning", "tsutils"] + "depends": ["BiocGenerics", "Rlibeemd", "TSdeeplearning", "keras", "magrittr", "reticulate", "tensorflow", "tsutils"] + }, + "EEML": { + "name": "EEML", + "version": "0.1.1", + "sha256": "1cwl5qyhxf4d51f0awx8ks355pi5mj6rhl6md5763bnrlakfrbpq", + "depends": ["MCS", "WeightedEnsemble", "topsis"] }, "EESPCA": { "name": "EESPCA", @@ -8873,7 +8981,7 @@ "name": "EFA.MRFA", "version": "1.1.2", "sha256": "0p1zkfwjch9y39r7hjccjk7vfbnfwpdak6jfjs1sdpqkjqiw3r86", - "depends": ["ggplot2", "PCovR", "psych", "reshape2", "scales"] + "depends": ["PCovR", "ggplot2", "psych", "reshape2", "scales"] }, "EFA_dimensions": { "name": "EFA.dimensions", @@ -8885,7 +8993,7 @@ "name": "EFAtools", "version": "0.4.4", "sha256": "1fzkmvadkcd88d81420lw9mhpmxbjymp4jada2c79bxq1h6b3mw2", - "depends": ["checkmate", "cli", "crayon", "dplyr", "future", "future_apply", "ggplot2", "GPArotation", "lavaan", "magrittr", "progress", "progressr", "psych", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tibble", "tidyr", "viridisLite"] + "depends": ["GPArotation", "Rcpp", "RcppArmadillo", "checkmate", "cli", "crayon", "dplyr", "future", "future_apply", "ggplot2", "lavaan", "magrittr", "progress", "progressr", "psych", "rlang", "stringr", "tibble", "tidyr", "viridisLite"] }, "EFAutilities": { "name": "EFAutilities", @@ -8897,19 +9005,19 @@ "name": "EFDR", "version": "1.3", "sha256": "0mjf2r1aa5iyf4b9f50mb50h1rmhwdi3qyh235mihy3pj68195yn", - "depends": ["copula", "doParallel", "dplyr", "foreach", "gstat", "Matrix", "sp", "tidyr", "waveslim"] + "depends": ["Matrix", "copula", "doParallel", "dplyr", "foreach", "gstat", "sp", "tidyr", "waveslim"] }, "EFS": { "name": "EFS", "version": "1.0.3", "sha256": "1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54", - "depends": ["party", "pROC", "randomForest", "ROCR"] + "depends": ["ROCR", "pROC", "party", "randomForest"] }, "EGAnet": { "name": "EGAnet", "version": "2.0.6", "sha256": "1mdnbxmpghk95wm3vy3m1yb0w39ym5v15cjznnyg17w7fy48mk3y", - "depends": ["dendextend", "fungible", "future", "future_apply", "GGally", "ggplot2", "ggpubr", "glasso", "GPArotation", "igraph", "lavaan", "Matrix", "network", "progressr", "qgraph", "semPlot", "sna"] + "depends": ["GGally", "GPArotation", "Matrix", "dendextend", "fungible", "future", "future_apply", "ggplot2", "ggpubr", "glasso", "igraph", "lavaan", "network", "progressr", "qgraph", "semPlot", "sna"] }, "EGM": { "name": "EGM", @@ -8921,19 +9029,19 @@ "name": "EGRET", "version": "3.0.9", "sha256": "1if22yq5wyfd0sx5b38xw3fbj8qlmbnkikjq77ihxd3pzfjpdl14", - "depends": ["dataRetrieval", "fields", "foreach", "MASS", "survival", "truncnorm"] + "depends": ["MASS", "dataRetrieval", "fields", "foreach", "survival", "truncnorm"] }, "EGRETci": { "name": "EGRETci", "version": "2.0.4", "sha256": "1g01a03smn5yp261cyk3x310m1mcv4bqyh8y123wam9gpa7dxrp6", - "depends": ["binom", "EGRET"] + "depends": ["EGRET", "binom"] }, "EGRNi": { "name": "EGRNi", "version": "0.1.6", "sha256": "0wgdhlmnch6gpypqlwd5z56ia03lbbimr4ci9gcfs8f881dh92dy", - "depends": ["fdrtool", "gdata", "MASS", "readr"] + "depends": ["MASS", "fdrtool", "gdata", "readr"] }, "EHR": { "name": "EHR", @@ -8945,7 +9053,7 @@ "name": "EHRtemporalVariability", "version": "1.2.1", "sha256": "12d1dzmcrp81dh54zkg9zwv11fnc4f8qzc2gngihmlrp1bzq76fi", - "depends": ["dplyr", "lubridate", "MASS", "plotly", "RColorBrewer", "scales", "viridis", "xts", "zoo"] + "depends": ["MASS", "RColorBrewer", "dplyr", "lubridate", "plotly", "scales", "viridis", "xts", "zoo"] }, "EIAapi": { "name": "EIAapi", @@ -8953,11 +9061,17 @@ "sha256": "1vyl7zm8vwqcs57b8sw9vkwc1p123kcz2d2xldg6p2vfkgi91jw1", "depends": ["data_table", "dplyr", "jsonlite", "lubridate"] }, + "EIEntropy": { + "name": "EIEntropy", + "version": "0.0.1.1", + "sha256": "1vw7y3i3qpxaj4m7s8yxi0c4bzipm5ggp2b1f0251xzlhffiisb7", + "depends": ["dplyr", "magrittr"] + }, "EIX": { "name": "EIX", "version": "1.2.0", "sha256": "02ry0aqqnd0zh6zbvx1dbq3sdahyqcgabhkvbbw4ig0qk70w62aj", - "depends": ["DALEX", "data_table", "ggiraphExtra", "ggplot2", "ggrepel", "iBreakDown", "MASS", "purrr", "scales", "tidyr", "xgboost"] + "depends": ["DALEX", "MASS", "data_table", "ggiraphExtra", "ggplot2", "ggrepel", "iBreakDown", "purrr", "scales", "tidyr", "xgboost"] }, "EKMCMC": { "name": "EKMCMC", @@ -8981,7 +9095,7 @@ "name": "ELISAtools", "version": "0.1.5", "sha256": "18f2adhw85f0hsz5gb6xhi0w2phcq364xy9y1jri6ckzs8g0pny7", - "depends": ["minpack_lm", "R2HTML", "stringi"] + "depends": ["R2HTML", "minpack_lm", "stringi"] }, "ELMR": { "name": "ELMR", @@ -9023,7 +9137,7 @@ "name": "EMAS", "version": "0.2.2", "sha256": "07y15nbym69iwdy9c5gcdalign7g8qw8hkcy1v29z6j2di6qzn84", - "depends": ["ggplot2", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "lavaan", "mediation", "minfi", "multilevel", "qqman"] + "depends": ["IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "ggplot2", "lavaan", "mediation", "minfi", "multilevel", "qqman"] }, "EMCluster": { "name": "EMCluster", @@ -9047,7 +9161,7 @@ "name": "EMDSVRhybrid", "version": "0.2.0", "sha256": "1vjr7aslvykbyz8aw2z5aqlqx1v3nv63hym6knygflkkpr9zsr30", - "depends": ["e1071", "EMD"] + "depends": ["EMD", "e1071"] }, "EMJMCMC": { "name": "EMJMCMC", @@ -9071,7 +9185,7 @@ "name": "EMMAgeo", "version": "0.9.7", "sha256": "1wz4zw45xfqbk589cpd188j7619h2ar2czfkisil9x8ksijfixls", - "depends": ["caTools", "GPArotation", "limSolve", "matrixStats", "shiny"] + "depends": ["GPArotation", "caTools", "limSolve", "matrixStats", "shiny"] }, "EMMIXSSL": { "name": "EMMIXSSL", @@ -9083,7 +9197,7 @@ "name": "EMMIXgene", "version": "0.1.4", "sha256": "1k82r5ly0rnivvw803jibgsdjmk5nfzqqzcx0yv41i3f60pflv8x", - "depends": ["BH", "ggplot2", "mclust", "Rcpp", "RcppArmadillo", "reshape", "scales"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "ggplot2", "mclust", "reshape", "scales"] }, "EMMIXmfa": { "name": "EMMIXmfa", @@ -9143,13 +9257,13 @@ "name": "EMbC", "version": "2.0.4", "sha256": "03vsyzq4zgv64yzazplj1sm3kgw0pdildcvi8w88b3d0rkjnhn5m", - "depends": ["mnormt", "RColorBrewer", "Rcpp", "RcppArmadillo", "sp", "suntools"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "mnormt", "sp", "suntools"] }, "EMgaussian": { "name": "EMgaussian", "version": "0.2.1", "sha256": "0gl3lfww7chwsvg16m5x6agbza4xx482b56wqccb9zqin0j89dfb", - "depends": ["caret", "glasso", "glassoFast", "lavaan", "Matrix", "matrixcalc", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "caret", "glasso", "glassoFast", "lavaan", "matrixcalc"] }, "EMpeaksR": { "name": "EMpeaksR", @@ -9161,7 +9275,7 @@ "name": "ENMTools", "version": "1.1.2", "sha256": "0xz0v378mfy36yc001zr8j8s2dv6jpq2w2da7n3lsxarr8slqp8m", - "depends": ["dismo", "ENMeval", "forcats", "ggplot2", "ggpubr", "gridExtra", "knitr", "lhs", "magrittr", "raster", "spatstat_geom", "spatstat_random", "terra"] + "depends": ["ENMeval", "dismo", "forcats", "ggplot2", "ggpubr", "gridExtra", "knitr", "lhs", "magrittr", "raster", "spatstat_geom", "spatstat_random", "terra"] }, "ENMeval": { "name": "ENMeval", @@ -9173,7 +9287,7 @@ "name": "EPLSIM", "version": "0.1.0", "sha256": "0x495638nh0n0k3i80vs7bcbdrgvw5fkib8dvwwgzgdgb419hakm", - "depends": ["ciTools", "ggplot2", "MASS"] + "depends": ["MASS", "ciTools", "ggplot2"] }, "EPT": { "name": "EPT", @@ -9221,19 +9335,19 @@ "name": "ERPM", "version": "0.2.0", "sha256": "1c2w61m7qp6ma4kfhgg0bxn4mkvcss340yq2vr7y5s1cbd082ndh", - "depends": ["igraph", "numbers", "RColorBrewer", "snowfall"] + "depends": ["RColorBrewer", "igraph", "numbers", "snowfall"] }, "ERPeq": { "name": "ERPeq", "version": "0.1.0", "sha256": "1619j6fgsg594fdbv9qk64rw2yqsy7wyj8qnwmpnmv66gxc5mqaq", - "depends": ["invgamma", "pracma", "rmutil", "VGAM"] + "depends": ["VGAM", "invgamma", "pracma", "rmutil"] }, "ERSA": { "name": "ERSA", "version": "0.1.4", "sha256": "1ri2v6qxdi9if10vxxhgj0jwk4whfi45aqqdqri918djg0dk75p1", - "depends": ["broom", "car", "combinat", "dplyr", "ggplot2", "leaps", "miniUI", "purrr", "RColorBrewer", "rlang", "shiny", "tidyr"] + "depends": ["RColorBrewer", "broom", "car", "combinat", "dplyr", "ggplot2", "leaps", "miniUI", "purrr", "rlang", "shiny", "tidyr"] }, "ESG": { "name": "ESG", @@ -9251,13 +9365,13 @@ "name": "EScvtmle", "version": "0.0.2", "sha256": "0bp5ykqczj6zyb9g5rg9zwwdyvd3l530km927wwxdi862sh5ri5g", - "depends": ["dplyr", "ggplot2", "gridExtra", "MASS", "origami", "stringr", "SuperLearner", "tidyselect"] + "depends": ["MASS", "SuperLearner", "dplyr", "ggplot2", "gridExtra", "origami", "stringr", "tidyselect"] }, "ETAS": { "name": "ETAS", "version": "0.6.1", "sha256": "1ivnv05cfbrrmglz319202nssghaq15h6l35k1pbal9gg7izd7xm", - "depends": ["fields", "goftest", "lattice", "maps", "Rcpp", "spatstat_explore", "spatstat_geom", "spatstat_random"] + "depends": ["Rcpp", "fields", "goftest", "lattice", "maps", "spatstat_explore", "spatstat_geom", "spatstat_random"] }, "ETASbootstrap": { "name": "ETASbootstrap", @@ -9293,7 +9407,7 @@ "name": "EValue", "version": "4.1.3", "sha256": "0ip4cyipbs6g0znrdh5zs4xizmqgdznq8riggkgyv06wipgx9a2j", - "depends": ["boot", "dplyr", "ggplot2", "metadat", "metafor", "MetaUtility"] + "depends": ["MetaUtility", "boot", "dplyr", "ggplot2", "metadat", "metafor"] }, "EVchargcost": { "name": "EVchargcost", @@ -9307,6 +9421,12 @@ "sha256": "19gd9grjjdv6hilqj41g5qhz7m0ga40q88clwggbp5f0f1yd5sym", "depends": ["Rcpp"] }, + "EWOC_Comb": { + "name": "EWOC.Comb", + "version": "1.0", + "sha256": "0ck8sqy729qsry290fgrn829vsv7snxjlwbn725q6adg8239v4z8", + "depends": ["MASS", "rjags"] + }, "EWS": { "name": "EWS", "version": "0.2.0", @@ -9341,13 +9461,13 @@ "name": "EZtune", "version": "3.1.1", "sha256": "0scslbgbbwma7sr0w9awg58ly5jwn877xsk6q1gq0ss3rd17pmfk", - "depends": ["ada", "BiocStyle", "e1071", "GA", "gbm", "glmnet", "optimx", "ROCR", "rpart"] + "depends": ["BiocStyle", "GA", "ROCR", "ada", "e1071", "gbm", "glmnet", "optimx", "rpart"] }, "Eagle": { "name": "Eagle", "version": "2.5", "sha256": "18y0hc5461gh7kp095xfpwpfnl7k3v545r8w6nrhabrhwsflrrij", - "depends": ["data_table", "fontawesome", "ggplot2", "ggthemes", "mmap", "plotly", "R_utils", "Rcpp", "RcppEigen", "shiny", "shinyBS", "shinyFiles", "shinyjs", "shinythemes"] + "depends": ["R_utils", "Rcpp", "RcppEigen", "data_table", "fontawesome", "ggplot2", "ggthemes", "mmap", "plotly", "shiny", "shinyBS", "shinyFiles", "shinyjs", "shinythemes"] }, "Ease": { "name": "Ease", @@ -9359,13 +9479,13 @@ "name": "EasyABC", "version": "1.5.2", "sha256": "173830655knpmc9qb7i2n4332rn3d3qp6566kmr2hrw60gh94v1j", - "depends": ["abc", "lhs", "MASS", "mnormt", "pls", "tensorA"] + "depends": ["MASS", "abc", "lhs", "mnormt", "pls", "tensorA"] }, "EasyDescribe": { "name": "EasyDescribe", "version": "0.1.2", "sha256": "1kjh45ndscwz1wdkf0rvnjw4qs73v9h1g45wagdqhsckywnhfksh", - "depends": ["car", "CATT", "clinfun", "fitdistrplus", "FSA", "gmodels", "multiCA", "nortest", "psych", "rcompanion"] + "depends": ["CATT", "FSA", "car", "clinfun", "fitdistrplus", "gmodels", "multiCA", "nortest", "psych", "rcompanion"] }, "EasyMx": { "name": "EasyMx", @@ -9389,7 +9509,7 @@ "name": "Ecfun", "version": "0.3-2", "sha256": "1q0mx70hy18rabpabxghaixkb3r1432cxln844cac4dqxhvzcqgy", - "depends": ["BMA", "fda", "jpeg", "MASS", "mvtnorm", "rvest", "stringi", "TeachingDemos", "tis", "xml2"] + "depends": ["BMA", "MASS", "TeachingDemos", "fda", "jpeg", "mvtnorm", "rvest", "stringi", "tis", "xml2"] }, "EcoDiet": { "name": "EcoDiet", @@ -9401,13 +9521,13 @@ "name": "EcoEnsemble", "version": "1.0.5", "sha256": "0d5kha5i49p7fd8g4f1i999sag4jz8if6yashshr9hp6jr6mibpc", - "depends": ["BH", "cowplot", "dplyr", "ggplot2", "matrixcalc", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "StanHeaders", "tibble"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cowplot", "dplyr", "ggplot2", "matrixcalc", "reshape2", "rstan", "rstantools", "tibble"] }, "EcoIndR": { "name": "EcoIndR", "version": "2.0", "sha256": "0wsr3lmmg6rph6mlq6mrwlal4ph65ps5vyqkglbzb67xz7kc1hz5", - "depends": ["FD", "picante", "Rarity", "splancs", "vegan"] + "depends": ["FD", "Rarity", "picante", "splancs", "vegan"] }, "EcoNetGen": { "name": "EcoNetGen", @@ -9455,7 +9575,7 @@ "name": "EcotoneFinder", "version": "0.2.3", "sha256": "1liqjakzg4c5kgjiir8i4fp4ax0737lfwriz277crh9p3jn3dgmh", - "depends": ["cluster", "colorspace", "corrplot", "e1071", "ggplot2", "igraph", "philentropy", "plyr", "purrr", "qgraph", "reshape", "rlang", "Rmisc", "vegan", "vegclust", "withr"] + "depends": ["Rmisc", "cluster", "colorspace", "corrplot", "e1071", "ggplot2", "igraph", "philentropy", "plyr", "purrr", "qgraph", "reshape", "rlang", "vegan", "vegclust", "withr"] }, "Ecume": { "name": "Ecume", @@ -9465,9 +9585,9 @@ }, "EdSurvey": { "name": "EdSurvey", - "version": "4.0.6", - "sha256": "1f26cmbfqb660335wzi0lx48q8dp0dbypykyskv7njf7rf0mg1cr", - "depends": ["car", "data_table", "Dire", "Formula", "glm2", "haven", "LaF", "lfactors", "lifecycle", "lme4", "MASS", "Matrix", "NAEPirtparams", "NAEPprimer", "quantreg", "readxl", "tibble", "wCorr", "WeMix", "xml2", "xtable"] + "version": "4.0.7", + "sha256": "1bdnwhdqk3m6134wibsbzkvy1fys2n4yf02i1wq9hzwh2g9alpp4", + "depends": ["Dire", "Formula", "LaF", "MASS", "Matrix", "NAEPirtparams", "NAEPprimer", "WeMix", "car", "data_table", "glm2", "haven", "lfactors", "lifecycle", "lme4", "quantreg", "readxl", "tibble", "wCorr", "xml2", "xtable"] }, "EffectLiteR": { "name": "EffectLiteR", @@ -9485,7 +9605,7 @@ "name": "EffectStars2", "version": "0.1-3", "sha256": "0yh4krqjh1jb7gjxb9z4f5bzarps0g9jfqbbva782a881dhcdl1x", - "depends": ["miscTools", "VGAM"] + "depends": ["VGAM", "miscTools"] }, "EffectTreat": { "name": "EffectTreat", @@ -9503,7 +9623,7 @@ "name": "EgoCor", "version": "1.2.0", "sha256": "135k9yccmzbkzhf8dlzm00pawaav01bzw4r2y45mcb1fdfwf5fg2", - "depends": ["gstat", "Rdpack", "shiny", "sp", "SpatialTools"] + "depends": ["Rdpack", "SpatialTools", "gstat", "shiny", "sp"] }, "EigenR": { "name": "EigenR", @@ -9517,29 +9637,35 @@ "sha256": "1wr2lkaf56qxsnqi7mgbgzy72lhkr0xlr1w1l9hy1dpmmqcqw7l3", "depends": ["ggplot2"] }, + "ElectDecomp": { + "name": "ElectDecomp", + "version": "0.0.1-1", + "sha256": "1wqcmrbmhi6fpmbb40yy59s6il02k9bxmw1nfk21m4rgb65ssggk", + "depends": [] + }, "ElevDistr": { "name": "ElevDistr", "version": "1.0.8", "sha256": "119r06ijd72z2f9asydlcy6i7sqgzfapy02wn13x5zf1cp459n8a", - "depends": ["ggmap", "ggplot2", "RANN", "terra"] + "depends": ["RANN", "ggmap", "ggplot2", "terra"] }, "Elja": { "name": "Elja", "version": "1.0.0", "sha256": "0znq40ccr828j9xwa3xixdp0i2fyj0x02lh5vxb61bf96y9njsvy", - "depends": ["devtools", "dplyr", "ggplot2", "MASS"] + "depends": ["MASS", "devtools", "dplyr", "ggplot2"] }, "ElliptCopulas": { "name": "ElliptCopulas", "version": "0.1.3", "sha256": "1hnkhd9hw2550kzjyycl1hzm9pk9j11n96hka59z8x74vrz980qp", - "depends": ["Matrix", "pbapply", "Rmpfr", "Runuran", "wdm"] + "depends": ["Matrix", "Rmpfr", "Runuran", "pbapply", "wdm"] }, "EloChoice": { "name": "EloChoice", "version": "0.29.4", "sha256": "1g8ivvnv16c2gniwd9xa9z89bm4rac0nrg3mcg1risgf9yk4rgm5", - "depends": ["psychotools", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "psychotools"] }, "EloOptimized": { "name": "EloOptimized", @@ -9549,27 +9675,27 @@ }, "EloRating": { "name": "EloRating", - "version": "0.46.11", - "sha256": "09nh3ia4s3c9yjhw0f0haqb26fryfc4lf9rgfcbqqzzwgdr1invj", - "depends": ["network", "Rcpp", "RcppArmadillo", "Rdpack", "sna", "zoo"] + "version": "0.46.18", + "sha256": "10j60fj4kxsm2rps3f3khvp91cb8srgnbxqna4yn0gsbdr0l138d", + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "network", "sna", "zoo"] }, "EloSteepness": { "name": "EloSteepness", "version": "0.5.0", "sha256": "1fqqvwbvhlr5h30mav5nch4gqjr61yvpydmbd1zq4a19hwb8rivd", - "depends": ["aniDom", "BH", "EloRating", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "EloRating", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "aniDom", "rstan", "rstantools"] }, "EmbedSOM": { "name": "EmbedSOM", "version": "2.1.2", "sha256": "0k4hja5y7qd0n3gfaxzxrz4wpxc1w9d4d4xbb63rq2nfk3lj7a42", - "depends": ["FNN", "ggplot2", "igraph", "Matrix", "Rtsne", "umap", "uwot"] + "depends": ["FNN", "Matrix", "Rtsne", "ggplot2", "igraph", "umap", "uwot"] }, "EmiR": { "name": "EmiR", "version": "1.0.4", "sha256": "1xhsf9n5af6z7v62vpnqjlp20s6fp7jf1wmgxgv77hxm4g5cm0q7", - "depends": ["data_table", "dplyr", "gganimate", "ggplot2", "mathjaxr", "plot3D", "Rcpp", "RcppProgress", "Rdpack", "tibble", "tictoc", "tidyr"] + "depends": ["Rcpp", "RcppProgress", "Rdpack", "data_table", "dplyr", "gganimate", "ggplot2", "mathjaxr", "plot3D", "tibble", "tictoc", "tidyr"] }, "EmiStatR": { "name": "EmiStatR", @@ -9587,7 +9713,7 @@ "name": "EmpiricalCalibration", "version": "3.1.2", "sha256": "013k43mwsjr5sgrvcp9dqcpylls0qm3ppn7xbgw7l46w22yik5hi", - "depends": ["ggplot2", "gridExtra", "Rcpp", "rlang"] + "depends": ["Rcpp", "ggplot2", "gridExtra", "rlang"] }, "EncDNA": { "name": "EncDNA", @@ -9605,7 +9731,7 @@ "name": "EnergyOnlineCPM", "version": "1.0", "sha256": "1a3wvclqdwcvq5inhliwjnd7xzqbjvzs8h8ncy6qlhjq6s5n7nm8", - "depends": ["energy", "MASS"] + "depends": ["MASS", "energy"] }, "EngrEcon": { "name": "EngrEcon", @@ -9671,13 +9797,13 @@ "name": "EntropyMCMC", "version": "1.0.4", "sha256": "065djml9dmn5ahbgaljnshvhziwg61xciq6fzh76449x3wy6bg65", - "depends": ["mixtools", "RANN"] + "depends": ["RANN", "mixtools"] }, "EnvCpt": { "name": "EnvCpt", "version": "1.1.3", "sha256": "1zv2x3svlqrfchr9j4bk2w2sx75zl4886pqk1c1sx5glqrkdbfki", - "depends": ["changepoint", "MASS", "zoo"] + "depends": ["MASS", "changepoint", "zoo"] }, "EnvNJ": { "name": "EnvNJ", @@ -9695,19 +9821,19 @@ "name": "EnvStats", "version": "2.8.1", "sha256": "19nnab201yalxbgpvpp5lkgqs0m17b5plsswmaxbvdv4mag2p58j", - "depends": ["ggplot2", "MASS", "nortest"] + "depends": ["MASS", "ggplot2", "nortest"] }, "EnviroPRA2": { "name": "EnviroPRA2", "version": "1.0.1", "sha256": "0r73l4f221ryyh2nfp0whcmhq06rzim447lqa56rmv00hcsmda52", - "depends": ["fitdistrplus", "kSamples", "MASS", "truncdist"] + "depends": ["MASS", "fitdistrplus", "kSamples", "truncdist"] }, "Epi": { "name": "Epi", - "version": "2.51", - "sha256": "0m9rvh21l9lqdlv71jrbix10g97wy2ryjv4zdjykfldhzzn4siik", - "depends": ["cmprsk", "data_table", "dplyr", "etm", "magrittr", "MASS", "Matrix", "mgcv", "numDeriv", "plyr", "survival", "zoo"] + "version": "2.53", + "sha256": "1ndyvj24j7b85l5rdldnb6ngkyv7x08jnc11nbjsbh5mn7swg4qi", + "depends": ["MASS", "Matrix", "cmprsk", "data_table", "dplyr", "etm", "magrittr", "mgcv", "numDeriv", "plyr", "survival", "zoo"] }, "EpiContactTrace": { "name": "EpiContactTrace", @@ -9719,7 +9845,7 @@ "name": "EpiCurve", "version": "2.4-2", "sha256": "1z81zrg96hmgj2j37vwwg0bd84bq80ck3f704w9j6v0drckzh03j", - "depends": ["dplyr", "ggplot2", "ISOweek", "RColorBrewer", "scales", "tibble", "timeDate"] + "depends": ["ISOweek", "RColorBrewer", "dplyr", "ggplot2", "scales", "tibble", "timeDate"] }, "EpiDynamics": { "name": "EpiDynamics", @@ -9737,13 +9863,13 @@ "name": "EpiForsk", "version": "0.1.1", "sha256": "0p8znwcx11sa5rqljsa38iwqwd91pvkw01g674grw2705cagjdnj", - "depends": ["broom", "cowplot", "data_table", "dplyr", "forcats", "ggplot2", "glue", "grf", "gridExtra", "Hmisc", "MatchIt", "nnet", "patchwork", "policytree", "progressr", "purrr", "rlang", "stringr", "survey", "survival", "svyVGAM", "tidyr", "VGAM"] + "depends": ["Hmisc", "MatchIt", "VGAM", "broom", "cowplot", "data_table", "dplyr", "forcats", "ggplot2", "glue", "grf", "gridExtra", "nnet", "patchwork", "policytree", "progressr", "purrr", "rlang", "stringr", "survey", "survival", "svyVGAM", "tidyr"] }, "EpiILM": { "name": "EpiILM", "version": "1.5.2", "sha256": "0drs4qywx9axs7k5qk7sp5r3g8pykn4lqqbm0hxyl24r6b5l3d6b", - "depends": ["adaptMCMC", "coda", "LaplacesDemon"] + "depends": ["LaplacesDemon", "adaptMCMC", "coda"] }, "EpiILMCT": { "name": "EpiILMCT", @@ -9761,19 +9887,19 @@ "name": "EpiLPS", "version": "1.3.0", "sha256": "0wdmkwcyqhjyyxrg7669sfrfqarvg5qrdm5zrchv9hnzjfxm4k9p", - "depends": ["coda", "EpiEstim", "ggplot2", "gridExtra", "Rcpp", "RcppArmadillo"] + "depends": ["EpiEstim", "Rcpp", "RcppArmadillo", "coda", "ggplot2", "gridExtra"] }, "EpiModel": { "name": "EpiModel", "version": "2.4.0", "sha256": "0bwi7rkiv2cg1srmzbyly89w6p9xppk90vjmbw6h5k9481gn097h", - "depends": ["ape", "coda", "deSolve", "doParallel", "dplyr", "egor", "ergm", "ergm_ego", "foreach", "ggplot2", "lazyeval", "network", "networkDynamic", "networkLite", "RColorBrewer", "Rcpp", "rlang", "statnet_common", "tergm", "tibble"] + "depends": ["RColorBrewer", "Rcpp", "ape", "coda", "deSolve", "doParallel", "dplyr", "egor", "ergm", "ergm_ego", "foreach", "ggplot2", "lazyeval", "network", "networkDynamic", "networkLite", "rlang", "statnet_common", "tergm", "tibble"] }, "EpiNow2": { "name": "EpiNow2", "version": "1.5.2", "sha256": "0nqa7dvp04ysqgdd5cjzfcd5vshk7jca251ljn8j55va186frmn5", - "depends": ["BH", "checkmate", "data_table", "futile_logger", "future", "future_apply", "ggplot2", "lifecycle", "lubridate", "patchwork", "posterior", "progressr", "purrr", "R_utils", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "runner", "scales", "StanHeaders", "truncnorm"] + "depends": ["BH", "R_utils", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "checkmate", "data_table", "futile_logger", "future", "future_apply", "ggplot2", "lifecycle", "lubridate", "patchwork", "posterior", "progressr", "purrr", "rlang", "rstan", "rstantools", "runner", "scales", "truncnorm"] }, "EpiReport": { "name": "EpiReport", @@ -9791,7 +9917,7 @@ "name": "EpiSignalDetection", "version": "0.1.2", "sha256": "17mawnx3c87kgfa7aj42a7db9c1ciyxdfgka9sgx6lc0yw5249as", - "depends": ["dplyr", "ISOweek", "rmarkdown", "shiny", "surveillance"] + "depends": ["ISOweek", "dplyr", "rmarkdown", "shiny", "surveillance"] }, "EpiStats": { "name": "EpiStats", @@ -9803,7 +9929,7 @@ "name": "EpiTest", "version": "1.0.0", "sha256": "0fr6lkn1782x9q91y12idbzsh40xz5vzqfag259g6p8m3gyjiq25", - "depends": ["dplyr", "ggplot2", "ggrepel", "magrittr", "MM4LMM", "purrr", "stringr"] + "depends": ["MM4LMM", "dplyr", "ggplot2", "ggrepel", "magrittr", "purrr", "stringr"] }, "EpistemicGameTheory": { "name": "EpistemicGameTheory", @@ -9851,13 +9977,13 @@ "name": "EstimationTools", "version": "4.0.0", "sha256": "1hwlrsxl42n4i25f1izhccj755aydl2r98w1jn12z9a62wk9nnzy", - "depends": ["autoimage", "BBmisc", "boot", "DEoptim", "GA", "gaussquad", "numDeriv", "Rdpack", "stringr", "survival"] + "depends": ["BBmisc", "DEoptim", "GA", "Rdpack", "autoimage", "boot", "gaussquad", "numDeriv", "stringr", "survival"] }, "EthSEQ": { "name": "EthSEQ", "version": "3.0.2", "sha256": "0wrqdvcfag83qidrfg2b6q86xmb3f03mda4kwx0f4a53wl5fjdrx", - "depends": ["data_table", "gdsfmt", "geometry", "MASS", "plot3D", "Rcpp", "SNPRelate"] + "depends": ["MASS", "Rcpp", "SNPRelate", "data_table", "gdsfmt", "geometry", "plot3D"] }, "EuclideanSD": { "name": "EuclideanSD", @@ -9869,19 +9995,19 @@ "name": "Euclimatch", "version": "1.0.1", "sha256": "09nydlqdxpfcvfaznpjchw3zlz05a03n7picn419ivvjmf6hrx8x", - "depends": ["doParallel", "foreach", "RColorBrewer", "Rcpp", "RcppParallel", "terra"] + "depends": ["RColorBrewer", "Rcpp", "RcppParallel", "doParallel", "foreach", "terra"] }, "Eunomia": { "name": "Eunomia", "version": "2.0.0", "sha256": "1ma5xsfyj6f1dd6n7k4fqxil3xbgj2d79vb7b4zjqf7cb14vljlg", - "depends": ["arrow", "CommonDataModel", "DBI", "readr", "rlang", "RSQLite"] + "depends": ["CommonDataModel", "DBI", "RSQLite", "arrow", "readr", "rlang"] }, "EurosarcBayes": { "name": "EurosarcBayes", "version": "1.1", "sha256": "12311s6ibw9q6kykhh689r93r7mwjhwrhkzdpc75grvw6ilgjmpm", - "depends": ["clinfun", "data_table", "plyr", "shiny", "VGAM"] + "depends": ["VGAM", "clinfun", "data_table", "plyr", "shiny"] }, "EvCombR": { "name": "EvCombR", @@ -9899,7 +10025,7 @@ "name": "EvaluateCore", "version": "0.1.3", "sha256": "1cmway61p2cfl9101x30hvvvmzvg2asnf6378dkinr7dr5ymnkxm", - "depends": ["agricolae", "boot", "car", "cluster", "dplyr", "entropy", "ggcorrplot", "ggplot2", "gridExtra", "kSamples", "mathjaxr", "psych", "Rdpack", "reshape2", "vegan"] + "depends": ["Rdpack", "agricolae", "boot", "car", "cluster", "dplyr", "entropy", "ggcorrplot", "ggplot2", "gridExtra", "kSamples", "mathjaxr", "psych", "reshape2", "vegan"] }, "EvaluationMeasures": { "name": "EvaluationMeasures", @@ -9917,7 +10043,7 @@ "name": "EventDetectGUI", "version": "0.3.0", "sha256": "02gwgbp692cfmf933jg1f7h4gghhc1v2cswz7rpcazm8h39mc4wh", - "depends": ["DT", "EventDetectR", "ggplot2", "plotly", "shiny", "shinyBS", "shinydashboard", "shinyjs", "XML"] + "depends": ["DT", "EventDetectR", "XML", "ggplot2", "plotly", "shiny", "shinyBS", "shinydashboard", "shinyjs"] }, "EventDetectR": { "name": "EventDetectR", @@ -9929,7 +10055,7 @@ "name": "EventPredInCure", "version": "1.0", "sha256": "1i11v671l5x31nhx0vz2zmjv3g3xr2yszd9vkhg71xnxmr1156cy", - "depends": ["dplyr", "erify", "flexsurv", "KMsurv", "lubridate", "MASS", "Matrix", "MLEcens", "msm", "mvtnorm", "numDeriv", "perm", "plotly", "rlang", "rstpm2", "survival", "tmvtnsim"] + "depends": ["KMsurv", "MASS", "MLEcens", "Matrix", "dplyr", "erify", "flexsurv", "lubridate", "msm", "mvtnorm", "numDeriv", "perm", "plotly", "rlang", "rstpm2", "survival", "tmvtnsim"] }, "EventWinRatios": { "name": "EventWinRatios", @@ -9941,7 +10067,7 @@ "name": "EvidenceSynthesis", "version": "0.5.0", "sha256": "0zyah27p1j7sxpcgpr05ws1whw7dd876nzygcvh5pyiikkahfmcm", - "depends": ["BeastJar", "coda", "Cyclops", "dplyr", "EmpiricalCalibration", "ggdist", "ggplot2", "gridExtra", "HDInterval", "meta", "rJava", "rlang", "survival"] + "depends": ["BeastJar", "Cyclops", "EmpiricalCalibration", "HDInterval", "coda", "dplyr", "ggdist", "ggplot2", "gridExtra", "meta", "rJava", "rlang", "survival"] }, "EviewsR": { "name": "EviewsR", @@ -9953,13 +10079,13 @@ "name": "EvoPhylo", "version": "0.3.2", "sha256": "1jgvvi355dxrjqniwcga7gzfj0jw3hgwbii2cv055rq9z5f442mr", - "depends": ["ape", "cluster", "deeptime", "devtools", "dplyr", "ggplot2", "ggrepel", "ggtree", "patchwork", "Rtsne", "treeio", "unglue"] + "depends": ["Rtsne", "ape", "cluster", "deeptime", "devtools", "dplyr", "ggplot2", "ggrepel", "ggtree", "patchwork", "treeio", "unglue"] }, "EvolutionaryGames": { "name": "EvolutionaryGames", "version": "0.1.2", "sha256": "0aaqd4q8imm2wgkgdpwwdl6nxgr3apgb3l24f2lwxgv2y045309d", - "depends": ["deSolve", "geometry", "ggplot2", "interp", "MASS", "reshape2"] + "depends": ["MASS", "deSolve", "geometry", "ggplot2", "interp", "reshape2"] }, "Evomorph": { "name": "Evomorph", @@ -9989,7 +10115,7 @@ "name": "ExPanDaR", "version": "0.5.3", "sha256": "1y4ccyvlvdx9lcgpyns6k2npc0rzwk8db4bmbi3pq9xmv7ycgmcz", - "depends": ["corrplot", "dplyr", "DT", "ggplot2", "kableExtra", "lmtest", "multiwayvcov", "openssl", "plm", "rio", "rlang", "scales", "shiny", "shinycssloaders", "stargazer", "tictoc", "tidyr", "zip"] + "depends": ["DT", "corrplot", "dplyr", "ggplot2", "kableExtra", "lmtest", "multiwayvcov", "openssl", "plm", "rio", "rlang", "scales", "shiny", "shinycssloaders", "stargazer", "tictoc", "tidyr", "zip"] }, "ExPosition": { "name": "ExPosition", @@ -9999,8 +10125,8 @@ }, "Exact": { "name": "Exact", - "version": "3.2", - "sha256": "0a33gbhzd580i31xxsjxigg0nl8ag1x4xz3jqmq5jqappc6f5d2k", + "version": "3.3", + "sha256": "0hikz8f19blywxs66xj6zf4krwyivsy3w165qvrnb0m2l6dx1l7v", "depends": ["rootSolve"] }, "ExactCIdiff": { @@ -10015,6 +10141,12 @@ "sha256": "049fh70aidsl60f355jkx93brkvaadpvlk7wxc196s51fddz2lwa", "depends": [] }, + "ExactCox": { + "name": "ExactCox", + "version": "0.1.0", + "sha256": "050d4g2jyp8qncy5biim45xvl8kkjg3rwwdcakmwjgs9c88zvls5", + "depends": ["BiasedUrn"] + }, "ExactMed": { "name": "ExactMed", "version": "0.3.0", @@ -10037,7 +10169,7 @@ "name": "ExceedanceTools", "version": "1.3.6", "sha256": "1yp4dl2sb7j41nbqhx0dsag9b3qg3l82snvjxnb57z4p63zsb2r5", - "depends": ["matrixStats", "SpatialTools", "splancs"] + "depends": ["SpatialTools", "matrixStats", "splancs"] }, "ExcelFunctionsR": { "name": "ExcelFunctionsR", @@ -10091,7 +10223,7 @@ "name": "ExpGenetic", "version": "0.1.0", "sha256": "096cxaqbc9y0bnj70fxk94585c880020pqqcx0dwwj839qkry4ha", - "depends": ["DESeq2", "futile_logger", "ggplot2", "ggsci", "plyr", "VennDiagram"] + "depends": ["DESeq2", "VennDiagram", "futile_logger", "ggplot2", "ggsci", "plyr"] }, "ExpImage": { "name": "ExpImage", @@ -10145,7 +10277,7 @@ "name": "ExtrPatt", "version": "0.1-4", "sha256": "0azmr5j1icac4apc4w5s2rx1ngzr634hm9n2gjyb6xx2ikwc7sy8", - "depends": ["doParallel", "foreach", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "doParallel", "foreach"] }, "ExtractTrainData": { "name": "ExtractTrainData", @@ -10187,7 +10319,7 @@ "name": "FACT", "version": "0.1.1", "sha256": "0klks2r2jf5v5z2n3gvqbssrpdd6nccbk7izvdl1cknisq8z5w4b", - "depends": ["checkmate", "data_table", "ggplot2", "gridExtra", "iml", "R6"] + "depends": ["R6", "checkmate", "data_table", "ggplot2", "gridExtra", "iml"] }, "FACTMLE": { "name": "FACTMLE", @@ -10199,19 +10331,19 @@ "name": "FADA", "version": "1.3.5", "sha256": "0srv3rghbkgyxbcjc1v68c5qgcir1d618skpc8imfmdaz9pnxchn", - "depends": ["corpcor", "crossval", "elasticnet", "glmnet", "MASS", "matrixStats", "mnormt", "sda", "sparseLDA"] + "depends": ["MASS", "corpcor", "crossval", "elasticnet", "glmnet", "matrixStats", "mnormt", "sda", "sparseLDA"] }, "FADPclust": { "name": "FADPclust", "version": "1.1.1", "sha256": "111lpq5hdrpyj8wdscjswk5p4akxhj3jbj5xk6ias2s5gfprla14", - "depends": ["cluster", "fda", "fda_usc", "fpc", "funData", "MFPCA"] + "depends": ["MFPCA", "cluster", "fda", "fda_usc", "fpc", "funData"] }, "FAIRmaterials": { "name": "FAIRmaterials", - "version": "0.4.1", - "sha256": "0434spa644g44qy7k0kapxxj34ch5vns8j27slx6j8i14ffxmzqq", - "depends": ["dplyr", "igraph", "jsonld", "jsonlite", "RColorBrewer", "stringr", "svDialogs", "tidyjson"] + "version": "0.4.2.1", + "sha256": "1hps94zc1pla3nhqayxhqnhws7sqhdg2xwyfw192v9zq7hincd8n", + "depends": ["DiagrammeR", "DiagrammeRsvg", "dplyr", "httr", "jsonld", "rdflib", "readr", "stringr", "tidyr", "xml2"] }, "FAMT": { "name": "FAMT", @@ -10223,13 +10355,13 @@ "name": "FAMetA", "version": "0.1.6", "sha256": "0hn4g0qqiy15jg42g27v0rmplm8gh84fr0kpp7q56c21mcs5w4h3", - "depends": ["accucor", "gplots", "gtools", "knitr", "LipidMS", "minpack_lm", "plyr", "rmarkdown", "scales", "tidyr"] + "depends": ["LipidMS", "accucor", "gplots", "gtools", "knitr", "minpack_lm", "plyr", "rmarkdown", "scales", "tidyr"] }, "FAMoS": { "name": "FAMoS", "version": "0.3.0", "sha256": "14gr9wv9bpibk0rrzzwijvdncx1fgnpbv55nqzbb4jhq7fdckmsa", - "depends": ["future", "R_utils"] + "depends": ["R_utils", "future"] }, "FAO56": { "name": "FAO56", @@ -10241,7 +10373,7 @@ "name": "FAOSTAT", "version": "2.4.0", "sha256": "0fyd9ypssax6pm3fzw7g864kaamfh8r3hi4ljd972g13n82b1jag", - "depends": ["classInt", "data_table", "httr", "labeling", "MASS", "plyr", "RJSONIO"] + "depends": ["MASS", "RJSONIO", "classInt", "data_table", "httr", "labeling", "plyr"] }, "FARDEEP": { "name": "FARDEEP", @@ -10259,7 +10391,7 @@ "name": "FAST.R", "version": "0.2.1", "sha256": "178v16f6f5manifv15r44mkl1zqspc9p4vwah3yvnqgd0zwq92x7", - "depends": ["caret", "dplyr", "DT", "ggplot2", "magrittr", "plater", "purrr", "RColorBrewer", "readxl", "scales", "shiny", "shinyFeedback", "shinyjs", "stringr", "tibble", "tidyr", "waiter", "zip"] + "depends": ["DT", "RColorBrewer", "caret", "dplyr", "ggplot2", "magrittr", "plater", "purrr", "readxl", "scales", "shiny", "shinyFeedback", "shinyjs", "stringr", "tibble", "tidyr", "waiter", "zip"] }, "FASeg": { "name": "FASeg", @@ -10271,7 +10403,7 @@ "name": "FAVAR", "version": "0.1.3", "sha256": "0nnljqhrji7c317rlrmx8xscyp6bx2s9zddjsq48c6x45mmsqpfx", - "depends": ["bvartools", "coda", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "Matrix", "MCMCpack"] + "depends": ["MCMCpack", "Matrix", "bvartools", "coda", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr"] }, "FAdist": { "name": "FAdist", @@ -10279,6 +10411,12 @@ "sha256": "166w9i8fgklx12jiq4n7l081znmdi6yvazhlxny4rgqif0z2kr9q", "depends": [] }, + "FAfA": { + "name": "FAfA", + "version": "0.2", + "sha256": "1cqfbd49pqn132l6nhp9v8jqj2vjkbsrzcph593n15vvgw3xbl2v", + "depends": ["dplyr", "golem", "lavaan", "magrittr", "psych", "shiny", "shinycssloaders", "shinydashboard"] + }, "FAmle": { "name": "FAmle", "version": "1.3.7", @@ -10289,7 +10427,7 @@ "name": "FAwR", "version": "1.1.2", "sha256": "1x90wvp0w7fhid7i5160b4fiv4xn5mpvy33zjzy0mvqvp0yp8xf0", - "depends": ["glpkAPI", "lattice", "MASS"] + "depends": ["MASS", "glpkAPI", "lattice"] }, "FBCRM": { "name": "FBCRM", @@ -10307,7 +10445,7 @@ "name": "FBMS", "version": "1.0", "sha256": "01zj6alrqis2kclghr4zyz04vgfip3fxxb54f26aczmjhpg71vyd", - "depends": ["fastglm", "GenSA", "Rcpp"] + "depends": ["GenSA", "Rcpp", "fastglm"] }, "FBN": { "name": "FBN", @@ -10333,12 +10471,6 @@ "sha256": "15xsqwnn5liqjbwg8qpj7prqdiykfxczdw9fyllya7x801ky1rfi", "depends": ["DataVisualizations", "ggplot2", "mclust"] }, - "FCSlib": { - "name": "FCSlib", - "version": "1.3.0", - "sha256": "1191ba6dwpakcdnbcq61zm5xq24isxjnn98nmvk67fpf1ycw70w9", - "depends": ["bitops", "fields", "stringr", "tiff"] - }, "FCVAR": { "name": "FCVAR", "version": "0.1.4", @@ -10373,25 +10505,25 @@ "name": "FDX", "version": "1.0.6", "sha256": "16d2gwdiqv3i37ad33mvad8hsni0i7zf3y85z9sgxvabhs5igva1", - "depends": ["DiscreteFDR", "PoissonBinomial", "pracma", "Rcpp"] + "depends": ["DiscreteFDR", "PoissonBinomial", "Rcpp", "pracma"] }, "FDboost": { "name": "FDboost", "version": "1.1-2", "sha256": "0fmcwjrcj4axdajavlyg7d200yb6wkxkd7fidmcsxpvpnbbb7wgj", - "depends": ["gamboostLSS", "MASS", "Matrix", "mboost", "mgcv", "stabs", "zoo"] + "depends": ["MASS", "Matrix", "gamboostLSS", "mboost", "mgcv", "stabs", "zoo"] }, "FEA": { "name": "FEA", "version": "0.0.2", "sha256": "1p2lsfhxih25i6rdwh64p4i5z72ds4a3x8a5p8db1jmx1qi07kq5", - "depends": ["geometry", "geosphere", "MASS", "ptinpoly", "sp"] + "depends": ["MASS", "geometry", "geosphere", "ptinpoly", "sp"] }, "FENmlm": { "name": "FENmlm", "version": "2.4.4", "sha256": "0s1i7kklh5vzfv6xi1j9dxp21cncs5gsxf7rn25rsg8b5srllsxl", - "depends": ["Formula", "MASS", "numDeriv", "Rcpp"] + "depends": ["Formula", "MASS", "Rcpp", "numDeriv"] }, "FER": { "name": "FER", @@ -10409,7 +10541,7 @@ "name": "FEprovideR", "version": "1.1", "sha256": "02hfdk9qhaq4y19p700w2i7qsdp4z2kyww0pr0pijfivkqks0vpi", - "depends": ["ggplot2", "Matrix", "poibin"] + "depends": ["Matrix", "ggplot2", "poibin"] }, "FFD": { "name": "FFD", @@ -10433,7 +10565,7 @@ "name": "FGLMtrunc", "version": "0.1.0", "sha256": "15pj2dmgbjbx4xi585rqggnp05xzpg9pn2iy76ibgkdvjqknkwii", - "depends": ["foreach", "glmnet", "Rcpp", "RcppArmadillo", "splines2"] + "depends": ["Rcpp", "RcppArmadillo", "foreach", "glmnet", "splines2"] }, "FGalgorithm": { "name": "FGalgorithm", @@ -10451,7 +10583,7 @@ "name": "FHtest", "version": "1.5.1", "sha256": "0x7lr88w0b09ng7nps490kgj8aqdjzmp9skv9iwqgn871pnpydms", - "depends": ["interval", "KMsurv", "MASS", "perm", "survival"] + "depends": ["KMsurv", "MASS", "interval", "perm", "survival"] }, "FI": { "name": "FI", @@ -10463,13 +10595,13 @@ "name": "FIESTA", "version": "3.6.4", "sha256": "1k7a58807mr32vgs8xgv1ni1ip0kfkd5b3vaxzzyf0jv85dfc8q0", - "depends": ["data_table", "DBI", "FIESTAutils", "gdalraster", "RSQLite", "sf", "sqldf"] + "depends": ["DBI", "FIESTAutils", "RSQLite", "data_table", "gdalraster", "sf", "sqldf"] }, "FIESTAutils": { "name": "FIESTAutils", "version": "1.2.3", "sha256": "11ny9cpgbw3lz98hxxsvsjfjxq0y1h8wlv53afwaxwrayckiv981", - "depends": ["data_table", "DBI", "gdalraster", "hbsae", "JoSAE", "mase", "nlme", "RColorBrewer", "Rcpp", "RPostgres", "RSQLite", "sae", "sf", "sqldf", "terra", "units"] + "depends": ["DBI", "JoSAE", "RColorBrewer", "RPostgres", "RSQLite", "Rcpp", "data_table", "gdalraster", "hbsae", "mase", "nlme", "sae", "sf", "sqldf", "terra", "units"] }, "FILEST": { "name": "FILEST", @@ -10481,7 +10613,7 @@ "name": "FIT", "version": "0.0.6", "sha256": "1nkjms9cvigc9sjha1krzhd3nmwsfh8pi0f1plf5k8zpb773zzb2", - "depends": ["gglasso", "MASS", "Rcpp", "RcppEigen", "XML"] + "depends": ["MASS", "Rcpp", "RcppEigen", "XML", "gglasso"] }, "FITSio": { "name": "FITSio", @@ -10505,7 +10637,7 @@ "name": "FKSUM", "version": "1.0.1", "sha256": "0ag8mzbjf2paslqspb18dk0ndqbp5rhmlmz9p2q2gxljfrdkzqkd", - "depends": ["MASS", "Matrix", "rARPACK", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "rARPACK"] }, "FLAME": { "name": "FLAME", @@ -10521,15 +10653,15 @@ }, "FLOPART": { "name": "FLOPART", - "version": "2023.8.31", - "sha256": "1adidd9fsgibiia6wgdnv3xf5gwvk7awk28ahdlr053nzdwr767r", - "depends": ["data_table", "Rcpp"] + "version": "2024.6.19", + "sha256": "1yifv9nzb9f6k6npr162rjakaam6k1r6ylw0knjnkp3q66znrsa9", + "depends": ["Rcpp", "data_table"] }, "FLORAL": { "name": "FLORAL", "version": "0.2.0", "sha256": "1a1jnvbfk2fyqs5jw3y04wxln4hxsahv4yiwrhdgdbk4az3yxp9p", - "depends": ["caret", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "glmnet", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppProgress", "reshape", "survcomp", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "caret", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "glmnet", "mvtnorm", "reshape", "survcomp", "survival"] }, "FLR": { "name": "FLR", @@ -10537,23 +10669,23 @@ "sha256": "0k50vi73qj7sjps0s6b2hq1cmpa4qr2vwkpd2wv2w1hhhrj8lm0n", "depends": ["combinat"] }, - "FLSSS": { - "name": "FLSSS", - "version": "9.1.3", - "sha256": "1mjjnasc5f3l44dch7wjxl0b6jbcyjkk6m5b3xgjrir5qyy7fmdk", - "depends": ["Rcpp", "RcppParallel"] + "FLightR": { + "name": "FLightR", + "version": "0.5.5", + "sha256": "0sw6qls30gr2hp7mwvjyh9h7cqga0ahkzg61d8pgdrc1fgbvsx0x", + "depends": ["CircStats", "RcppArmadillo", "bit", "circular", "fields", "geosphere", "ggmap", "ggplot2", "maps", "mgcv", "nlme", "sf", "suntools", "truncnorm"] }, "FMAT": { "name": "FMAT", - "version": "2024.6", - "sha256": "082i5hzw41vmdg1q7c42jpnisn0mip3mgs0z440dckv7dk2pnr2i", + "version": "2024.7", + "sha256": "1cijvrp9rzznjn8lvclzvjv2kqi412n512mwnkddr617vdxy4gn5", "depends": ["cli", "crayon", "data_table", "dplyr", "forcats", "glue", "irr", "plyr", "psych", "purrr", "reticulate", "stringr", "tidyr"] }, "FMAdist": { "name": "FMAdist", "version": "0.1.2", "sha256": "09lv6zk36qrrrjs0wkda5rr4pjm7q317gc5dr197w7ggsqibp4b6", - "depends": ["actuar", "EnvStats", "extraDistr", "fitdistrplus", "MASS", "quadprog"] + "depends": ["EnvStats", "MASS", "actuar", "extraDistr", "fitdistrplus", "quadprog"] }, "FMC": { "name": "FMC", @@ -10565,13 +10697,13 @@ "name": "FMCCSD", "version": "1.0", "sha256": "0c50km5ba6biq9p3mycxhy00ij2gr6y5zf3q8ycq0g1mbk8ybfb7", - "depends": ["numDeriv", "orthopolynom", "Rcpp", "RcppArmadillo", "splines2"] + "depends": ["Rcpp", "RcppArmadillo", "numDeriv", "orthopolynom", "splines2"] }, "FME": { "name": "FME", "version": "1.3.6.3", "sha256": "189n3svhlfp86svn8p88wi38lhsz0bqndys0pq87c6grsj5c5i43", - "depends": ["coda", "deSolve", "MASS", "minpack_lm", "minqa", "rootSolve"] + "depends": ["MASS", "coda", "deSolve", "minpack_lm", "minqa", "rootSolve"] }, "FMM": { "name": "FMM", @@ -10595,7 +10727,7 @@ "name": "FMradio", "version": "1.1.1", "sha256": "02d5imhagkr2cwgs6r77mbd2jg8k5ga17xp3rwaryykg2k4glacs", - "depends": ["Biobase", "expm", "ggplot2", "MASS", "reshape"] + "depends": ["Biobase", "MASS", "expm", "ggplot2", "reshape"] }, "FMsmsnReg": { "name": "FMsmsnReg", @@ -10613,13 +10745,13 @@ "name": "FOCI", "version": "0.1.3", "sha256": "0iax5569a0v18j2l52mw26yimx11fqqbxj5q7jgba9jf7ylp410w", - "depends": ["data_table", "gmp", "proxy", "RANN"] + "depends": ["RANN", "data_table", "gmp", "proxy"] }, "FORTLS": { "name": "FORTLS", "version": "1.4.0", "sha256": "0h5ninw5hkrkbri8yazy5wfv4yslp303iq6fyiwv7nd3wda8wln5", - "depends": ["data_table", "dbscan", "Distance", "htmlwidgets", "lidR", "moments", "plotly", "progress", "raster", "Rcpp", "RcppEigen", "RCSF", "reticulate", "scales", "sf", "tidyr", "VoxR", "vroom"] + "depends": ["Distance", "RCSF", "Rcpp", "RcppEigen", "VoxR", "data_table", "dbscan", "htmlwidgets", "lidR", "moments", "plotly", "progress", "raster", "reticulate", "scales", "sf", "tidyr", "vroom"] }, "FPCA3D": { "name": "FPCA3D", @@ -10631,13 +10763,13 @@ "name": "FPCdpca", "version": "0.1.0", "sha256": "0hrciisfnr3b0gs3szjy46fjl8mxpyclmv6ids5mq71spqzaxccp", - "depends": ["matrixcalc", "Rdimtools", "rsvd"] + "depends": ["Rdimtools", "matrixcalc", "rsvd"] }, "FPDclustering": { "name": "FPDclustering", "version": "2.3.1", "sha256": "04m75z320x9bxa3qi3yi60pl6b8fb1lxvx83q81iv42qw4998kd0", - "depends": ["cluster", "ExPosition", "GGally", "ggeasy", "ggplot2", "klaR", "MASS", "mvtnorm", "rootSolve", "ThreeWay"] + "depends": ["ExPosition", "GGally", "MASS", "ThreeWay", "cluster", "ggeasy", "ggplot2", "klaR", "mvtnorm", "rootSolve"] }, "FPLdata": { "name": "FPLdata", @@ -10661,19 +10793,19 @@ "name": "FRAPO", "version": "0.4-1", "sha256": "0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq", - "depends": ["cccp", "Rglpk", "timeSeries"] + "depends": ["Rglpk", "cccp", "timeSeries"] }, "FRCC": { "name": "FRCC", "version": "1.1.0", "sha256": "18i2lrx2qkwj8j1c3q2vx901hx1f68bnjyrzyhkfmnswyy358368", - "depends": ["calibrate", "CCP", "corpcor", "MASS"] + "depends": ["CCP", "MASS", "calibrate", "corpcor"] }, "FREEtree": { "name": "FREEtree", "version": "0.1.0", "sha256": "1i2liqbcg993snj5vq341mmafzhn1yrwljvx4f3kyzy0pa59k6rn", - "depends": ["glmertree", "MASS", "pre", "WGCNA"] + "depends": ["MASS", "WGCNA", "glmertree", "pre"] }, "FREQ": { "name": "FREQ", @@ -10683,27 +10815,27 @@ }, "FRESA_CAD": { "name": "FRESA.CAD", - "version": "3.4.7", - "sha256": "1lczys1pcs15w8bz3i6kxglfhi4gih5ayrs51kg7d3c4la4di57a", - "depends": ["Hmisc", "miscTools", "pROC", "Rcpp", "RcppArmadillo", "stringr"] + "version": "3.4.8", + "sha256": "1jxbdn3acz6xwka1mkdwlamm00rj7vga4rnypz9qljjngk3vlzkp", + "depends": ["Hmisc", "Rcpp", "RcppArmadillo", "miscTools", "pROC", "stringr"] }, "FRESHD": { "name": "FRESHD", "version": "1.0", "sha256": "0lpggf59dd3kwp2y9p4acvhdmc6i47bwa5lk6d6cp8q0g7sr44rm", - "depends": ["glamlasso", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "glamlasso"] }, "FRI": { "name": "FRI", "version": "1.0", "sha256": "17ddbr0hndpr5627n67467787rq8hidi1jn1c3xf7f7qz800jjf5", - "depends": ["forcats", "ggplot2", "neuralnet", "RSNNS"] + "depends": ["RSNNS", "forcats", "ggplot2", "neuralnet"] }, "FRK": { "name": "FRK", - "version": "2.2.3", - "sha256": "0wlx58il39qnl9wi92mkdhjarqvrp5i2hw4cyzaijrsfal1i0v42", - "depends": ["digest", "dplyr", "ggplot2", "ggpubr", "Hmisc", "Matrix", "plyr", "Rcpp", "RcppEigen", "reshape2", "scales", "sp", "spacetime", "sparseinv", "statmod", "TMB"] + "version": "2.3.1", + "sha256": "1zlghqkljvajsab3xdq564r289cd9b85h4002rnyg23jj32ga6dl", + "depends": ["Hmisc", "Matrix", "Rcpp", "RcppEigen", "TMB", "digest", "dplyr", "fmesher", "ggplot2", "ggpubr", "plyr", "reshape2", "scales", "sp", "spacetime", "sparseinv", "statmod"] }, "FSA": { "name": "FSA", @@ -10719,8 +10851,8 @@ }, "FSDAM": { "name": "FSDAM", - "version": "2024.1-30", - "sha256": "1jikdfhqb985a1g0r1z70n9wwnlw1ag32jdc74938ny65gqnp5sb", + "version": "2024.7-30", + "sha256": "0fv64dls0z8fb7pfgmqxnzmdqdf4dwr8z9xq18pswf14r7b425bc", "depends": ["kyotil", "reticulate"] }, "FSInteract": { @@ -10733,7 +10865,7 @@ "name": "FSK2R", "version": "0.1.3", "sha256": "0hsrg49q42by4i3dywi59wwy5h56fnfdr10s6rk1y9dyliksmj43", - "depends": ["dplyr", "purrr", "R_utils", "readtext", "readxl", "rjson", "rlang", "shiny", "tibble", "tidyr", "XML", "xml2", "zip"] + "depends": ["R_utils", "XML", "dplyr", "purrr", "readtext", "readxl", "rjson", "rlang", "shiny", "tibble", "tidyr", "xml2", "zip"] }, "FSM": { "name": "FSM", @@ -10751,19 +10883,19 @@ "name": "FSTpackage", "version": "0.1", "sha256": "1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb", - "depends": ["CompQuadForm", "MASS", "Matrix", "mvtnorm", "SKAT"] + "depends": ["CompQuadForm", "MASS", "Matrix", "SKAT", "mvtnorm"] }, "FSelector": { "name": "FSelector", "version": "0.34", "sha256": "07nvfykr6zls7ip5nz9j3062nlna2va3dyldck292v96rd56xl99", - "depends": ["digest", "entropy", "randomForest", "RWeka"] + "depends": ["RWeka", "digest", "entropy", "randomForest"] }, "FSelectorRcpp": { "name": "FSelectorRcpp", "version": "0.3.11", "sha256": "008zc270injmjhr2zqs0jw21f7vrmmclzjnin9xsx8drfk8bhdvn", - "depends": ["BH", "foreach", "iterators", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "foreach", "iterators", "testthat"] }, "FUNTA": { "name": "FUNTA", @@ -10771,6 +10903,12 @@ "sha256": "02yxz95s2hs26mfmgwhv5d54yyjz0aczjpnay8b4gpzbpd6aci61", "depends": [] }, + "FVDDPpkg": { + "name": "FVDDPpkg", + "version": "0.1.2", + "sha256": "0277cdllqdvkzs888hbn4ygppni09ky64n3pl8gnm244px36fqy5", + "depends": ["Rcpp", "Rdpack"] + }, "FWDselect": { "name": "FWDselect", "version": "2.1.0", @@ -10793,7 +10931,7 @@ "name": "FactoClass", "version": "1.2.9", "sha256": "1i42mwmkh7lip01x5qkw03xrcqqbsfsa7qs2xrpr9hzfp61f1xcm", - "depends": ["ade4", "ggplot2", "ggrepel", "KernSmooth", "scatterplot3d", "xtable"] + "depends": ["KernSmooth", "ade4", "ggplot2", "ggrepel", "scatterplot3d", "xtable"] }, "FactoInvestigate": { "name": "FactoInvestigate", @@ -10805,7 +10943,7 @@ "name": "FactoMineR", "version": "2.11", "sha256": "0qzhfjcz0kahqf214g4xs7gfpqx05xbfiwa5r2ldgn2drd16phij", - "depends": ["car", "cluster", "DT", "ellipse", "emmeans", "flashClust", "ggplot2", "ggrepel", "lattice", "leaps", "MASS", "multcompView", "scatterplot3d"] + "depends": ["DT", "MASS", "car", "cluster", "ellipse", "emmeans", "flashClust", "ggplot2", "ggrepel", "lattice", "leaps", "multcompView", "scatterplot3d"] }, "FactorAssumptions": { "name": "FactorAssumptions", @@ -10817,13 +10955,13 @@ "name": "FactorCopula", "version": "0.9.3", "sha256": "1lvqa62v9rvz7pmrx06riqndh4jyw60an04hpg6if523jsxpa5nz", - "depends": ["abind", "igraph", "matlab", "polycor", "statmod", "VineCopula"] + "depends": ["VineCopula", "abind", "igraph", "matlab", "polycor", "statmod"] }, "Factoshiny": { "name": "Factoshiny", "version": "2.6", "sha256": "14ija58kscww8bf4p1lcbwvd7yxmp4h8jnk8898q9qh08rbahram", - "depends": ["colourpicker", "DT", "FactoInvestigate", "FactoMineR", "ggplot2", "ggrepel", "missMDA", "shiny", "shinydashboard", "shinyjqui"] + "depends": ["DT", "FactoInvestigate", "FactoMineR", "colourpicker", "ggplot2", "ggrepel", "missMDA", "shiny", "shinydashboard", "shinyjqui"] }, "Fahrmeir": { "name": "Fahrmeir", @@ -10839,15 +10977,15 @@ }, "FamEvent": { "name": "FamEvent", - "version": "3.1", - "sha256": "1b2dh0kcvarczp3666by66sx6v1p2xbj1k43nji7cks1mmmln3qn", - "depends": ["cmprsk", "eha", "kinship2", "MASS", "matrixcalc", "pracma", "survival", "truncnorm"] + "version": "3.2", + "sha256": "05p8k1kqqbsc4n1gbfcmsq9s7hrp3q7460rb8nw5ms7w06wvkvpp", + "depends": ["MASS", "cmprsk", "eha", "kinship2", "matrixcalc", "pracma", "survival", "truncnorm"] }, "Familias": { "name": "Familias", "version": "2.6.1", "sha256": "1hx35xj5yjpbkpf4hz8kx7i4q3s2m5dvwb0mcnz1svibim04hll0", - "depends": ["kinship2", "Rsolnp"] + "depends": ["Rsolnp", "kinship2"] }, "Families": { "name": "Families", @@ -10859,13 +10997,13 @@ "name": "FamilyRank", "version": "1.0", "sha256": "0v1b3a6rxbbl7xdy977j02x1ni66879x98vg6ngbaqvh7v9vl82x", - "depends": ["plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "plyr"] }, "FarmSelect": { "name": "FarmSelect", "version": "1.0.2", "sha256": "174rzv9k0hdcfdkv7bisy70rip2iy0bnj3qa54i00wqwjdglgjdn", - "depends": ["fBasics", "ncvreg", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "fBasics", "ncvreg"] }, "FarmTest": { "name": "FarmTest", @@ -10889,7 +11027,7 @@ "name": "FastGP", "version": "1.2", "sha256": "120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv", - "depends": ["MASS", "mvtnorm", "rbenchmark", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Rcpp", "RcppEigen", "mvtnorm", "rbenchmark"] }, "FastGaSP": { "name": "FastGaSP", @@ -10907,7 +11045,7 @@ "name": "FastJM", "version": "1.4.2", "sha256": "0h5kywvbwxd13ghgvfgx1sr7k4ywgk4c51xfpr8dvqig9nnvrav8", - "depends": ["caret", "dplyr", "MASS", "nlme", "Rcpp", "RcppEigen", "statmod", "survival", "timeROC"] + "depends": ["MASS", "Rcpp", "RcppEigen", "caret", "dplyr", "nlme", "statmod", "survival", "timeROC"] }, "FastKM": { "name": "FastKM", @@ -10925,31 +11063,37 @@ "name": "FastPCS", "version": "0.1.4", "sha256": "0azd8j9b85qmvmy335anlgchsjz1qp0xhc18jq7hniz04f6gva7q", - "depends": ["matrixStats", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "matrixStats"] }, "FastRCS": { "name": "FastRCS", "version": "0.0.9", "sha256": "12xavg273hd08cb2azd61birfdgsn3mls7m7jw6hjpvhb37ds69j", - "depends": ["matrixStats", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "matrixStats"] }, "FastRWeb": { "name": "FastRWeb", "version": "1.2-1", "sha256": "1kpj38b08xd2zyas1ac5jj1vfyb2b5q2kai55h5plcjlz3h627lp", - "depends": ["base64enc", "Cairo"] + "depends": ["Cairo", "base64enc"] }, "FastSF": { "name": "FastSF", "version": "0.1.1", "sha256": "1xajav45h57hchzkvl2pb4mz9xy433lq74jnry0icid8dai5xhwb", - "depends": ["limSolve", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "limSolve"] }, "FastStepGraph": { "name": "FastStepGraph", "version": "0.1.1", "sha256": "0f05cyhdz1530vhwv6r76lpcj7lqq5xrvhmpjfv716v0c4j2i72s", - "depends": ["doParallel", "foreach", "MASS"] + "depends": ["MASS", "doParallel", "foreach"] + }, + "FastUtils": { + "name": "FastUtils", + "version": "0.2.1", + "sha256": "0nscg4kjgi5s8fpr8ni2d4rf4s362gkamvlz3nc3lp7mdniaxkyj", + "depends": ["BiocManager", "Rcpp", "assertthat", "cli", "devtools", "dplyr", "ggplot2", "hash", "lifecycle", "rlang", "testthat", "usethis"] }, "FatTailsR": { "name": "FatTailsR", @@ -10961,7 +11105,7 @@ "name": "FateID", "version": "0.2.2", "sha256": "0sgvaqhqkmmkcsl53bm1jlfpzrvzfb5cz8k513nizfsi638vydlm", - "depends": ["locfit", "matrixStats", "pheatmap", "princurve", "randomForest", "RColorBrewer", "Rtsne", "som", "umap"] + "depends": ["RColorBrewer", "Rtsne", "locfit", "matrixStats", "pheatmap", "princurve", "randomForest", "som", "umap"] }, "FaultTree": { "name": "FaultTree", @@ -10977,15 +11121,15 @@ }, "FeatureExtraction": { "name": "FeatureExtraction", - "version": "3.5.2", - "sha256": "0gl2j3kiap00yc8krs9ki9v91qfa082yprnzgr9nyp9c15gggmmx", - "depends": ["Andromeda", "checkmate", "cli", "DatabaseConnector", "DBI", "dplyr", "jsonlite", "ParallelLogger", "pillar", "readr", "rJava", "rlang", "RSQLite", "SqlRender"] + "version": "3.6.0", + "sha256": "0d4r65aacxz9pzsxlzavl95j7v6qc2i86bc89439fdh2iwc4lyz9", + "depends": ["Andromeda", "DBI", "DatabaseConnector", "ParallelLogger", "RSQLite", "SqlRender", "checkmate", "cli", "dplyr", "jsonlite", "pillar", "rJava", "readr", "rlang"] }, "FeatureHashing": { "name": "FeatureHashing", "version": "0.9.2", "sha256": "05cap6251dk3x7802ii33zv41pahng68h7fvx5z8y6ii4vzlgd57", - "depends": ["BH", "digest", "magrittr", "Matrix", "Rcpp"] + "depends": ["BH", "Matrix", "Rcpp", "digest", "magrittr"] }, "FeatureImpCluster": { "name": "FeatureImpCluster", @@ -11009,7 +11153,7 @@ "name": "FedIRT", "version": "0.1.0", "sha256": "0qihs2m1qdp9kfw8f7a76r6cppfi9bxlj2mk4670v4ds2mqyq7xw", - "depends": ["callr", "DT", "ggplot2", "httr", "pracma", "purrr", "shiny", "shinyjs"] + "depends": ["DT", "callr", "ggplot2", "httr", "pracma", "purrr", "shiny", "shinyjs"] }, "FeedbackTS": { "name": "FeedbackTS", @@ -11045,13 +11189,13 @@ "name": "FiSh", "version": "1.1", "sha256": "1fcs2y3diszypv7sr4vl75wizcxv0na0pqflmlrizs2w7kyw51p6", - "depends": ["fda_usc", "KernSmooth"] + "depends": ["KernSmooth", "fda_usc"] }, "FielDHub": { "name": "FielDHub", - "version": "1.3.7", - "sha256": "1w0hwqah5h41423sc6ggcwcsxczwy0bs7mc2zy98g1fhsnk3ipfj", - "depends": ["blocksdesign", "config", "desplot", "dplyr", "DT", "ggplot2", "golem", "htmltools", "numbers", "plotly", "shiny", "shinyalert", "shinycssloaders", "shinyjs", "shinythemes", "viridis"] + "version": "1.4.2", + "sha256": "1sfrhz6b3pzrcjp3jdg35yxj3j2m7mvzhwwv49f7nvfmrs3fx936", + "depends": ["DT", "blocksdesign", "config", "desplot", "dplyr", "ggplot2", "golem", "htmltools", "numbers", "plotly", "shiny", "shinyalert", "shinycssloaders", "shinyjs", "shinythemes", "viridis"] }, "FieldSimR": { "name": "FieldSimR", @@ -11059,6 +11203,12 @@ "sha256": "1yhys0zb6rzd3xx8lwxg6n9dak15nlhyg8a0bkgjfad8ljihlkyj", "depends": ["cluster", "ggplot2", "interp", "lattice", "mbend"] }, + "FilmsGmooG": { + "name": "FilmsGmooG", + "version": "0.1.0", + "sha256": "0572vnjp8ycgpkdm4h4rws9rjhhc9iqyc65zzin9bfawa4ic81rd", + "depends": [] + }, "FinAna": { "name": "FinAna", "version": "0.1.2", @@ -11069,7 +11219,7 @@ "name": "FinCal", "version": "0.6.3", "sha256": "1clvnvhpf2krrf8flhmdxmys6ym3xw3v4v07kk1if4xb0dfk9wgy", - "depends": ["ggplot2", "RCurl", "reshape2"] + "depends": ["RCurl", "ggplot2", "reshape2"] }, "FinCovRegularization": { "name": "FinCovRegularization", @@ -11093,7 +11243,7 @@ "name": "FinancialInstrument", "version": "1.3.1", "sha256": "0f1zaclrcmpkdhcfc8a09f7lsf2b7gfyd7js3173qckn84a01f3w", - "depends": ["quantmod", "TTR", "xts", "zoo"] + "depends": ["TTR", "quantmod", "xts", "zoo"] }, "FinancialMath": { "name": "FinancialMath", @@ -11105,7 +11255,7 @@ "name": "FindIt", "version": "1.2.0", "sha256": "0zrvkvj907fw86jnzzlwk4d90hi42nq45jprp16xryxb7xxii6i8", - "depends": ["arm", "glinternet", "glmnet", "igraph", "lars", "limSolve", "lmtest", "Matrix", "quadprog", "sandwich"] + "depends": ["Matrix", "arm", "glinternet", "glmnet", "igraph", "lars", "limSolve", "lmtest", "quadprog", "sandwich"] }, "FinePop": { "name": "FinePop", @@ -11135,25 +11285,25 @@ "name": "FishResp", "version": "1.1.1", "sha256": "16my9pyzxyz3l087hq2r60fm08rgah3pg4arlqrwk1nn423cbr5v", - "depends": ["chron", "lattice", "mclust", "respirometry", "rMR"] + "depends": ["chron", "lattice", "mclust", "rMR", "respirometry"] }, "FisherEM": { "name": "FisherEM", "version": "1.6", "sha256": "18xn0hnj5diq7falrjl04abqyyrvyzaikb9l6wh7hfhflhsd382c", - "depends": ["elasticnet", "ellipse", "ggplot2", "MASS", "plyr"] + "depends": ["MASS", "elasticnet", "ellipse", "ggplot2", "plyr"] }, "FitDynMix": { "name": "FitDynMix", "version": "1.0.0", "sha256": "1miwqdlgvyqyql67mjclx1fiild59p37zani9hxa0lzs2bbhrz43", - "depends": ["evir", "ks", "MASS", "pracma", "Rdpack"] + "depends": ["MASS", "Rdpack", "evir", "ks", "pracma"] }, "FitUltD": { "name": "FitUltD", "version": "3.1.0", "sha256": "17fj211riybq71k63wjfv2ndc2h46ay5svrac2v5i3b92cb9hkbv", - "depends": ["ADGofTest", "assertthat", "cowplot", "fitdistrplus", "ggplot2", "MASS", "mclust", "purrr"] + "depends": ["ADGofTest", "MASS", "assertthat", "cowplot", "fitdistrplus", "ggplot2", "mclust", "purrr"] }, "FixSeqMTP": { "name": "FixSeqMTP", @@ -11169,8 +11319,8 @@ }, "FjordLight": { "name": "FjordLight", - "version": "0.8", - "sha256": "031wpxvdbwkj6ay18l594hs0w45amdxd2lppwpa8sx4jyycfwbn9", + "version": "1.0.0", + "sha256": "07rb1x5b6wywla4jg6vb5s50c7a0m4bwgchxj4bnbcx53swrh2sf", "depends": ["curl", "ncdf4", "raster"] }, "FlexDir": { @@ -11195,7 +11345,7 @@ "name": "FlexReg", "version": "1.3.0", "sha256": "15vl2wfvplydjgdgcb4gla02n6hx9lljnw20r5rvhw4ll6ahr110", - "depends": ["bayesplot", "BH", "Formula", "ggplot2", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "ggplot2", "loo", "rstan", "rstantools"] }, "FlexScan": { "name": "FlexScan", @@ -11207,7 +11357,7 @@ "name": "FlexVarJM", "version": "0.1.0", "sha256": "1gq832bhwjs59blhblj5l3c92sa6mid57r5dkk4lv2pfdbagfj5a", - "depends": ["ggplot2", "lcmm", "marqLevAlg", "mvtnorm", "randtoolbox", "Rcpp", "RcppArmadillo", "survival", "survminer"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "lcmm", "marqLevAlg", "mvtnorm", "randtoolbox", "survival", "survminer"] }, "FlickrAPI": { "name": "FlickrAPI", @@ -11233,6 +11383,12 @@ "sha256": "1s9xyrvfsgrl2zxm2an5qj3rs1qx7v7j8wc83jzl28pkwa5xr351", "depends": ["changepoint", "evir", "zyp"] }, + "FlowerMate": { + "name": "FlowerMate", + "version": "1.0", + "sha256": "0hl91lz1ikhqransinn0zqa2gmx0fyl7yqxnjjj4h8ssff63hwrc", + "depends": [] + }, "FluMoDL": { "name": "FluMoDL", "version": "0.0.3", @@ -11249,7 +11405,7 @@ "name": "FlyingR", "version": "0.2.2", "sha256": "08jyp4hfb9pydicx4i6vgi94p6pykyi545w8svhar2fwmn1ik955", - "depends": ["kableExtra", "knitr", "Rcpp", "rmarkdown"] + "depends": ["Rcpp", "kableExtra", "knitr", "rmarkdown"] }, "FnR": { "name": "FnR", @@ -11261,13 +11417,13 @@ "name": "FoReco", "version": "0.2.6", "sha256": "07ivfjs836g3k13kfv188lxv300n43vczmkcapxnwiii643y1kw8", - "depends": ["cli", "corpcor", "mathjaxr", "Matrix", "osqp"] + "depends": ["Matrix", "cli", "corpcor", "mathjaxr", "osqp"] }, "ForIT": { "name": "ForIT", "version": "2.4.0", "sha256": "0kc15b05dp3cybjln49d0ly962s4gayidi0qpb6mcy0qdxvb17lv", - "depends": ["dplyr", "ggplot2", "magrittr", "metR", "purrr", "RColorBrewer", "rlang", "tibble", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "magrittr", "metR", "purrr", "rlang", "tibble", "tidyr"] }, "ForagingOrg": { "name": "ForagingOrg", @@ -11279,7 +11435,7 @@ "name": "ForeCA", "version": "0.2.7", "sha256": "1falhz9v0z76h60gz66rh9wvk3jsjv8fvbkhkx9jmzbrkla397cd", - "depends": ["astsa", "MASS", "reshape2"] + "depends": ["MASS", "astsa", "reshape2"] }, "ForeComp": { "name": "ForeComp", @@ -11291,7 +11447,7 @@ "name": "ForecastComb", "version": "1.3.1", "sha256": "07cbiv172mpkwvg6svhwgavlfy2144ir3y1l7w37wbd0ygs514id", - "depends": ["forecast", "ggplot2", "Matrix", "mtsdi", "psych", "quadprog", "quantreg"] + "depends": ["Matrix", "forecast", "ggplot2", "mtsdi", "psych", "quadprog", "quantreg"] }, "ForecastCombinations": { "name": "ForecastCombinations", @@ -11303,7 +11459,7 @@ "name": "ForecastTB", "version": "1.0.1", "sha256": "1wqgw4i65ajwj8la8mgv2qqm4ydgk90i6chdkd8h33rlwh8yddc6", - "depends": ["circlize", "decomposedPSF", "forecast", "ggplot2", "gridExtra", "imputeTestbench", "PSF", "RColorBrewer", "reshape2"] + "depends": ["PSF", "RColorBrewer", "circlize", "decomposedPSF", "forecast", "ggplot2", "gridExtra", "imputeTestbench", "reshape2"] }, "ForestDisc": { "name": "ForestDisc", @@ -11321,19 +11477,19 @@ "name": "ForestGapR", "version": "0.1.7", "sha256": "0pj1rq2gqhigrv5v734hj0gmjb6qnipy9crd14qdvzbjhprg4i4z", - "depends": ["igraph", "poweRlaw", "raster", "sp", "spatstat_explore", "spatstat_geom", "VGAM", "viridis"] + "depends": ["VGAM", "igraph", "poweRlaw", "raster", "sp", "spatstat_explore", "spatstat_geom", "viridis"] }, "ForestTools": { "name": "ForestTools", "version": "1.0.2", "sha256": "1c5p4j9kva63hi54zj76vxfydrgkfvszwzzlpn0ippijgrwmcf6j", - "depends": ["GLCMTextures", "imager", "Matrix", "sf", "terra"] + "depends": ["GLCMTextures", "Matrix", "imager", "sf", "terra"] }, "FormShare": { "name": "FormShare", "version": "1.0.1", "sha256": "17wdqjymc33r7r17h3fwi0ixlbpl77k1fm9a6r3gjwxixz8kicx3", - "depends": ["httr", "jsonlite", "R6"] + "depends": ["R6", "httr", "jsonlite"] }, "FormulR": { "name": "FormulR", @@ -11357,7 +11513,7 @@ "name": "FossilSimShiny", "version": "1.1.2", "sha256": "1i9ni95qynw96d7v7b1a1wrixl3wm73rz4fzj07kcwb3ypps2b77", - "depends": ["FossilSim", "shiny", "shinyjs", "TreeSim"] + "depends": ["FossilSim", "TreeSim", "shiny", "shinyjs"] }, "FourScores": { "name": "FourScores", @@ -11369,7 +11525,7 @@ "name": "FourWayHMM", "version": "1.0.0", "sha256": "0zi42d214dq70ypgj8g57fwjbqfih4z0956njpj2739aqsnjq5v4", - "depends": ["data_table", "doSNOW", "foreach", "LaplacesDemon", "mclust", "snow", "tensor", "tidyr", "withr"] + "depends": ["LaplacesDemon", "data_table", "doSNOW", "foreach", "mclust", "snow", "tensor", "tidyr", "withr"] }, "FourgameteP": { "name": "FourgameteP", @@ -11435,25 +11591,25 @@ "name": "FunCC", "version": "1.0", "sha256": "0n8fnrq3grsxxcz1841d3d643nyrwc7y15na1205zxq6rmdjx7wa", - "depends": ["biclust", "ggplot2", "narray", "RColorBrewer", "reshape"] + "depends": ["RColorBrewer", "biclust", "ggplot2", "narray", "reshape"] }, "FunChisq": { "name": "FunChisq", "version": "2.5.4", "sha256": "0y5minhjas4rihg8c4lvy2f323makza28p20c303rpzh4k50diji", - "depends": ["BH", "dqrng", "Rcpp", "Rdpack"] + "depends": ["BH", "Rcpp", "Rdpack", "dqrng"] }, "FunWithNumbers": { "name": "FunWithNumbers", "version": "1.2", "sha256": "0p3czcc6v1wwdbdfmar1q0z4b7r75p39zd2bw0dl14wcn7fn59sq", - "depends": ["bigBits", "gmp", "Rmpfr"] + "depends": ["Rmpfr", "bigBits", "gmp"] }, "FuncDiv": { "name": "FuncDiv", "version": "1.0.0", "sha256": "19jfxy9mhhsfr2mf3l9d125swy20qcyxfqd2fk9m6cly9ajzggza", - "depends": ["ape", "collapse", "data_table", "parallelDist", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppXPtrUtils"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "RcppXPtrUtils", "ape", "collapse", "data_table", "parallelDist"] }, "FuncMap": { "name": "FuncMap", @@ -11465,13 +11621,13 @@ "name": "FuncNN", "version": "1.0", "sha256": "0kcr7c54igzi0imp8w9a0mnrqaa2qcls9777scsjz5sbcxdy3if3", - "depends": ["caret", "doParallel", "fda", "fda_usc", "flux", "foreach", "ggplot2", "ggpubr", "keras", "Matrix", "pbapply", "reshape2", "tensorflow"] + "depends": ["Matrix", "caret", "doParallel", "fda", "fda_usc", "flux", "foreach", "ggplot2", "ggpubr", "keras", "pbapply", "reshape2", "tensorflow"] }, "FunctanSNP": { "name": "FunctanSNP", "version": "0.1.0", "sha256": "1f1zdwr9pmpscb8va9gd7yl0vyxmv0hy6swfrh7074whvs0dkbn7", - "depends": ["caret", "fda", "funData", "glmnet", "lava", "MASS"] + "depends": ["MASS", "caret", "fda", "funData", "glmnet", "lava"] }, "FunnelPlotR": { "name": "FunnelPlotR", @@ -11501,13 +11657,13 @@ "name": "FuzzyClass", "version": "0.1.6", "sha256": "1ld40qaiig743x21iwzpiabc1ky72hqrdnh855wfgvkmln9jc9by", - "depends": ["caTools", "doParallel", "e1071", "EnvStats", "foreach", "MASS", "mvtnorm", "purrr", "Rdpack", "rootSolve", "trapezoid"] + "depends": ["EnvStats", "MASS", "Rdpack", "caTools", "doParallel", "e1071", "foreach", "mvtnorm", "purrr", "rootSolve", "trapezoid"] }, "FuzzyDBScan": { "name": "FuzzyDBScan", "version": "0.0.3", "sha256": "1a974s5j03caifcypk1c7la96754gh6n20xak7qaf9hrbm5i7vr9", - "depends": ["checkmate", "data_table", "dbscan", "ggplot2", "R6"] + "depends": ["R6", "checkmate", "data_table", "dbscan", "ggplot2"] }, "FuzzyLP": { "name": "FuzzyLP", @@ -11559,8 +11715,8 @@ }, "FuzzySTs": { "name": "FuzzySTs", - "version": "0.2", - "sha256": "0zs1pyn9apysspxa0glqc96h6npmvvhiqvqpcm0brslz0b6xnilp", + "version": "0.3", + "sha256": "01bzkq9aj2afj87vz6vn6i8cs2368ppb5z9fpwlpkyjpp2a0cxsv", "depends": ["FuzzyNumbers", "polynom"] }, "FuzzySimRes": { @@ -11591,19 +11747,19 @@ "name": "G2Sd", "version": "2.1.5", "sha256": "165i6x2k56vwhk5p2p5m9vjmp9flblsapjdlz7nw9b719l6xz5zk", - "depends": ["ggplot2", "reshape2", "rJava", "shiny", "xlsx", "xlsxjars"] + "depends": ["ggplot2", "rJava", "reshape2", "shiny", "xlsx", "xlsxjars"] }, "GA": { "name": "GA", "version": "3.2.4", "sha256": "1gc1n2xdzrkc9cvrm6a50c9xpwvf0isdgvs1qpm8x1afacw6d7z5", - "depends": ["cli", "crayon", "foreach", "iterators", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "cli", "crayon", "foreach", "iterators"] }, "GABB": { "name": "GABB", "version": "0.3.8", "sha256": "16gdg5yvzlvic3qc9ya68xkbx55jg7lvlnqjry9x4c5hvggywzvl", - "depends": ["dplyr", "egg", "ggforce", "ggplot2", "ggplotify", "ggpubr", "ggrepel", "Hotelling", "pheatmap", "tidyr", "vegan"] + "depends": ["Hotelling", "dplyr", "egg", "ggforce", "ggplot2", "ggplotify", "ggpubr", "ggrepel", "pheatmap", "tidyr", "vegan"] }, "GACFF": { "name": "GACFF", @@ -11621,7 +11777,7 @@ "name": "GADAG", "version": "0.99.0", "sha256": "1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g", - "depends": ["igraph", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "igraph"] }, "GAGAs": { "name": "GAGAs", @@ -11633,7 +11789,7 @@ "name": "GAGBLUP", "version": "1.0", "sha256": "192r4fr3idl78g9vllb7hdvlrfkghh1airblb94c1mjyrjkj2hxa", - "depends": ["doParallel", "foreach", "GA"] + "depends": ["GA", "doParallel", "foreach"] }, "GAIPE": { "name": "GAIPE", @@ -11645,7 +11801,7 @@ "name": "GALLO", "version": "1.5", "sha256": "0idzzkgxfr5im9p7xk7f4iph445rp8y2dzdzddm4x9i4fnh5hkwn", - "depends": ["circlize", "CompQuadForm", "data_table", "doParallel", "dplyr", "DT", "foreach", "ggplot2", "igraph", "lattice", "Matrix", "RColorBrewer", "rtracklayer", "stringr", "unbalhaar", "visNetwork", "webshot"] + "depends": ["CompQuadForm", "DT", "Matrix", "RColorBrewer", "circlize", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "igraph", "lattice", "rtracklayer", "stringr", "unbalhaar", "visNetwork", "webshot"] }, "GAMens": { "name": "GAMens", @@ -11687,7 +11843,7 @@ "name": "GAS", "version": "0.3.4", "sha256": "014b2y9qrv44j5v559bnw7yiacs9aarsgpbrj3clxm4n0srhv843", - "depends": ["cubature", "MASS", "numDeriv", "Rcpp", "RcppArmadillo", "Rsolnp", "xts", "zoo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rsolnp", "cubature", "numDeriv", "xts", "zoo"] }, "GAparsimony": { "name": "GAparsimony", @@ -11717,7 +11873,7 @@ "name": "GBJ", "version": "0.5.4", "sha256": "0vi4zv59g4fjq28gq6b8mn5gmddwvq9sijjilcd6wr7jl67c0fbs", - "depends": ["BH", "mvtnorm", "Rcpp", "SKAT"] + "depends": ["BH", "Rcpp", "SKAT", "mvtnorm"] }, "GCCfactor": { "name": "GCCfactor", @@ -11735,7 +11891,7 @@ "name": "GCPBayes", "version": "4.2.0", "sha256": "134rqclfix1p91nb1sn3js3l8pbgsl0i22ygz2gl73jjhckk0j75", - "depends": ["gdata", "invgamma", "MASS", "mvtnorm", "postpack", "Rcpp", "RcppArmadillo", "truncnorm", "wiqid"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "gdata", "invgamma", "mvtnorm", "postpack", "truncnorm", "wiqid"] }, "GCPM": { "name": "GCPM", @@ -11757,8 +11913,8 @@ }, "GCalignR": { "name": "GCalignR", - "version": "1.0.6", - "sha256": "1cgsmz1793yw9v4wwcd1a9igsjjhpzv0inikj2q2p98pzshhkwcb", + "version": "1.0.7", + "sha256": "1c8vsklvkggwarh38rd1k88n0jaqcy7r23gyy5khsfkglzgkg2ns", "depends": ["ggplot2", "pbapply", "readr", "reshape2", "stringr", "tibble"] }, "GD": { @@ -11777,7 +11933,7 @@ "name": "GDAtools", "version": "2.1", "sha256": "1561zzw177kc7x3hiqzi7qm1yvczx8lzjb2j7d45zgwgz96v9vf8", - "depends": ["descriptio", "FactoMineR", "ggplot2", "ggrepel", "rlang"] + "depends": ["FactoMineR", "descriptio", "ggplot2", "ggrepel", "rlang"] }, "GDELTtools": { "name": "GDELTtools", @@ -11785,6 +11941,12 @@ "sha256": "0v368chcgqnrfy2isy8z7gl0xizafhxlcd29gr89iblhrzwmssid", "depends": ["datetimeutils", "dplyr", "plyr", "stringr"] }, + "GDILM_ME": { + "name": "GDILM.ME", + "version": "1.2.1", + "sha256": "1gq2snfbmzfddh3bnga26p37ywahqxq5mnnmr3in8an3x5fdpw2v", + "depends": ["MASS", "corpcor", "mvtnorm", "ngspatial", "numDeriv", "psych"] + }, "GDILM_SIR": { "name": "GDILM.SIR", "version": "1.2.1", @@ -11795,7 +11957,7 @@ "name": "GDINA", "version": "2.9.4", "sha256": "10bbwr4q6cp36dnwhddviqg7f00h92gdmvblw0lxn72v4869vhn1", - "depends": ["alabama", "ggplot2", "MASS", "nloptr", "numDeriv", "Rcpp", "RcppArmadillo", "Rsolnp", "shiny", "shinydashboard"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rsolnp", "alabama", "ggplot2", "nloptr", "numDeriv", "shiny", "shinydashboard"] }, "GDPuc": { "name": "GDPuc", @@ -11813,7 +11975,7 @@ "name": "GE", "version": "0.4.5", "sha256": "0fnf6z08989g132p0prif49zqa3a399wq0wzz7n964cqvz5g3j5f", - "depends": ["CGE", "data_tree", "DiagrammeR"] + "depends": ["CGE", "DiagrammeR", "data_tree"] }, "GEC": { "name": "GEC", @@ -11825,7 +11987,7 @@ "name": "GEEaSPU", "version": "1.0.2", "sha256": "02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg", - "depends": ["gee", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "gee"] }, "GEEmediate": { "name": "GEEmediate", @@ -11837,19 +11999,19 @@ "name": "GEInfo", "version": "1.0", "sha256": "08ha9w3c64x9ib2fbh4djbhg7y6lykibx93mbm7i3gdvpajqk0jx", - "depends": ["dplyr", "glmnet", "MASS", "pheatmap", "rvest"] + "depends": ["MASS", "dplyr", "glmnet", "pheatmap", "rvest"] }, "GEInter": { "name": "GEInter", "version": "0.3.2", "sha256": "15nrnidbih5fw7i7g6d8rjllw2jbmligz2kzj2fqg30llck9ivl5", - "depends": ["ggplot2", "Hmisc", "MASS", "pcaPP", "quantreg", "reshape2", "survival"] + "depends": ["Hmisc", "MASS", "ggplot2", "pcaPP", "quantreg", "reshape2", "survival"] }, "GENEAclassify": { "name": "GENEAclassify", "version": "1.5.5", "sha256": "0iy75m31i0wb27kvknx3ln9crbllpgdc6j2qsx6hwn4gxddl9lv0", - "depends": ["changepoint", "GENEAread", "MASS", "rpart", "signal"] + "depends": ["GENEAread", "MASS", "changepoint", "rpart", "signal"] }, "GENEAread": { "name": "GENEAread", @@ -11861,19 +12023,19 @@ "name": "GENLIB", "version": "1.1.10", "sha256": "1h0digaa1szgwq0qzf3114id7bx7q6zmgar591jlxgyihihk4x9j", - "depends": ["BH", "bootstrap", "doParallel", "foreach", "kinship2", "lattice", "Matrix", "quadprog", "Rcpp"] + "depends": ["BH", "Matrix", "Rcpp", "bootstrap", "doParallel", "foreach", "kinship2", "lattice", "quadprog"] }, "GENMETA": { "name": "GENMETA", "version": "0.2.0", "sha256": "11wlcnj919jws62ngf29gr2p0shdlm917hkz5iwfss1m8gcbfjnl", - "depends": ["magic", "MASS", "Matrix", "pracma"] + "depends": ["MASS", "Matrix", "magic", "pracma"] }, "GEOmap": { "name": "GEOmap", - "version": "2.5-5", - "sha256": "0gs8zd8rcdxgz0pm3nlynf4qy8axfsv7syagb22zi8yd4s4sf5wa", - "depends": ["fields", "MBA", "RPMG", "sf"] + "version": "2.5-11", + "sha256": "1h6f8wyf3p5a0mr5mvm7cv9v67gjfyzip1fw4rsqx6zkc9nyaswp", + "depends": ["MBA", "RPMG", "fields", "sf"] }, "GESE": { "name": "GESE", @@ -11897,7 +12059,7 @@ "name": "GEVACO", "version": "1.0.1", "sha256": "0zkan4w96g3qc1hgla90mh32b55bk58gax095p4nxrfi46f8w3rf", - "depends": ["nlme", "RLRsim"] + "depends": ["RLRsim", "nlme"] }, "GEVcdn": { "name": "GEVcdn", @@ -11921,31 +12083,31 @@ "name": "GFD", "version": "0.3.3", "sha256": "1d40fwk367ww544z25jwlx2kdm1gv7y6ijl8vnpi198n7k1hdgpl", - "depends": ["magic", "MASS", "Matrix", "plotrix", "plyr", "shiny", "shinyjs", "shinythemes", "shinyWidgets", "tippy"] + "depends": ["MASS", "Matrix", "magic", "plotrix", "plyr", "shiny", "shinyWidgets", "shinyjs", "shinythemes", "tippy"] }, "GFDmcv": { "name": "GFDmcv", "version": "0.1.0", "sha256": "094b41sx3czz9sjqhvxggkmrdcwfwv8ww9k4286vzd055jbvk5hh", - "depends": ["doParallel", "foreach", "HSAUR", "MASS", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["HSAUR", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "mvtnorm", "stringr"] }, "GFDrmst": { "name": "GFDrmst", "version": "0.1.0", "sha256": "1qas9dj65mqjfzslxxljy17370vc0v6fwypgv971kvk9wx1a2a00", - "depends": ["GFDmcv", "lpSolve", "MASS", "mvtnorm", "plyr", "shiny", "shinyjs", "shinyMatrix", "shinythemes", "shinyWidgets", "tippy"] + "depends": ["GFDmcv", "MASS", "lpSolve", "mvtnorm", "plyr", "shiny", "shinyMatrix", "shinyWidgets", "shinyjs", "shinythemes", "tippy"] }, "GFDsurv": { "name": "GFDsurv", "version": "0.1.1", "sha256": "0qq66f8ddw92m9k9raid89rggla9691xi2sn1w3r7lmwqf6ajsl4", - "depends": ["gridExtra", "magic", "MASS", "plyr", "shiny", "shinyjs", "shinythemes", "survival", "survminer", "tippy"] + "depends": ["MASS", "gridExtra", "magic", "plyr", "shiny", "shinyjs", "shinythemes", "survival", "survminer", "tippy"] }, "GFE": { "name": "GFE", "version": "0.1.1", "sha256": "1mhlvp7i8g4b3mj4qwfnk0vl7af9sflgi6zgsjjp16kdsv42zkwn", - "depends": ["data_table", "dplyr", "TeachingSampling"] + "depends": ["TeachingSampling", "data_table", "dplyr"] }, "GFGM_copula": { "name": "GFGM.copula", @@ -11957,7 +12119,7 @@ "name": "GFM", "version": "1.2.1", "sha256": "13v8gsn1zsxcji52n3mv1bik5xjqzg8n01rak1bvffm9qwakg571", - "depends": ["doSNOW", "irlba", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "doSNOW", "irlba"] }, "GFisher": { "name": "GFisher", @@ -11979,27 +12141,27 @@ }, "GGIR": { "name": "GGIR", - "version": "3.1-1", - "sha256": "1vmx4bmjsk0sdxpafmpsiiiv0z4pyi6lfsxbb9mrqmhkqdhp2yrf", - "depends": ["ActCR", "data_table", "doParallel", "foreach", "GGIRread", "ineq", "irr", "lubridate", "psych", "read_gt3x", "signal", "unisensR", "zoo"] + "version": "3.1-2", + "sha256": "1vy57qbnav1kl71wwznb0kl3s06csqm0sx5k90hzwqjignxnc223", + "depends": ["ActCR", "GGIRread", "data_table", "doParallel", "foreach", "ineq", "irr", "lubridate", "psych", "read_gt3x", "signal", "unisensR", "zoo"] }, "GGIRread": { "name": "GGIRread", "version": "1.0.1", "sha256": "0kad21xqwb2c4phg4mq7480qvki5frn2c2slfbcfj9paxxl4ha16", - "depends": ["bitops", "matlab", "Rcpp"] + "depends": ["Rcpp", "bitops", "matlab"] }, "GGMncv": { "name": "GGMncv", "version": "2.1.1", "sha256": "0lih9dyb5aqrawhiy2vhv63b132hhzq6zq0x6rbrhy8kbkldhigr", - "depends": ["GGally", "ggplot2", "glassoFast", "MASS", "mathjaxr", "network", "numDeriv", "pbapply", "Rcpp", "RcppArmadillo", "Rdpack", "reshape", "sna"] + "depends": ["GGally", "MASS", "Rcpp", "RcppArmadillo", "Rdpack", "ggplot2", "glassoFast", "mathjaxr", "network", "numDeriv", "pbapply", "reshape", "sna"] }, "GGMnonreg": { "name": "GGMnonreg", "version": "1.0.0", "sha256": "1bhqk172ddc7xq1hqj1i6q8np6jvmf2xypvd8kp3w1bcsafsbms8", - "depends": ["bestglm", "corpcor", "doParallel", "foreach", "GGally", "GGMncv", "ggplot2", "MASS", "Matrix", "network", "poibin", "psych", "Rdpack", "sna"] + "depends": ["GGMncv", "GGally", "MASS", "Matrix", "Rdpack", "bestglm", "corpcor", "doParallel", "foreach", "ggplot2", "network", "poibin", "psych", "sna"] }, "GGMridge": { "name": "GGMridge", @@ -12017,25 +12179,25 @@ "name": "GGRidge", "version": "1.1.0", "sha256": "08gj61ahk7ilvsz93xcdv7yknkmfz2spbym6c2c62gq8cva9zg86", - "depends": ["CVglasso", "gRbase", "MASS"] + "depends": ["CVglasso", "MASS", "gRbase"] }, "GGUM": { "name": "GGUM", "version": "0.5", "sha256": "1xbbapam5whnsa0f2fpvj2v56c7g5wm4jcs0xwzrcjlp9g293vqj", - "depends": ["abind", "psych", "Rdpack", "viridis", "xlsx"] + "depends": ["Rdpack", "abind", "psych", "viridis", "xlsx"] }, "GGally": { "name": "GGally", "version": "2.2.1", "sha256": "1il6yphqxcyj1039imi8pn6ygyni24daz8ljxxp3z9inb5k2dcwb", - "depends": ["dplyr", "ggplot2", "ggstats", "gtable", "lifecycle", "magrittr", "plyr", "progress", "RColorBrewer", "rlang", "scales", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggstats", "gtable", "lifecycle", "magrittr", "plyr", "progress", "rlang", "scales", "tidyr"] }, "GGoutlieR": { "name": "GGoutlieR", "version": "1.0.2", "sha256": "18ass4fxdsvcn9j103dixar0grrh5w3nh6icydh1w5myrd455z9l", - "depends": ["cowplot", "doParallel", "FastKNN", "foreach", "ggforce", "ggplot2", "RColorBrewer", "rlang", "rnaturalearth", "scales", "sf", "tidyr"] + "depends": ["FastKNN", "RColorBrewer", "cowplot", "doParallel", "foreach", "ggforce", "ggplot2", "rlang", "rnaturalearth", "scales", "sf", "tidyr"] }, "GHS": { "name": "GHS", @@ -12047,7 +12209,7 @@ "name": "GHap", "version": "3.0.0", "sha256": "1fyxgnn6b474rx8cqg9lgdybq5j4nriq2axwgmhx7m8f7mysrqny", - "depends": ["class", "data_table", "e1071", "Matrix", "pedigreemm", "sparseinv", "stringi"] + "depends": ["Matrix", "class", "data_table", "e1071", "pedigreemm", "sparseinv", "stringi"] }, "GIC": { "name": "GIC", @@ -12089,7 +12251,7 @@ "name": "GISSB", "version": "1.1", "sha256": "0clhch4xvklrmk7h6b7vz83zzlj5r1lzrszy73agmpdbs5cax5sy", - "depends": ["cppRouting", "dplyr", "here", "httr", "igraph", "leaflet", "magrittr", "nabor", "purrr", "RCurl", "reshape2", "rlang", "sf", "stringr", "tibble", "tidygraph", "tidyselect"] + "depends": ["RCurl", "cppRouting", "dplyr", "here", "httr", "igraph", "leaflet", "magrittr", "nabor", "purrr", "reshape2", "rlang", "sf", "stringr", "tibble", "tidygraph", "tidyselect"] }, "GInSARCorW": { "name": "GInSARCorW", @@ -12107,7 +12269,7 @@ "name": "GJRM", "version": "0.2-6.5", "sha256": "0j69lh8hbdcmgj6bwg67s1mlgffcmc045z6sm6p3jifcg8ri18sw", - "depends": ["copula", "evd", "gamlss_dist", "ggplot2", "ismev", "magic", "matrixStats", "mgcv", "mnormt", "numDeriv", "psych", "Rmpfr", "scam", "survey", "survival", "trust", "VGAM", "VineCopula"] + "depends": ["Rmpfr", "VGAM", "VineCopula", "copula", "evd", "gamlss_dist", "ggplot2", "ismev", "magic", "matrixStats", "mgcv", "mnormt", "numDeriv", "psych", "scam", "survey", "survival", "trust"] }, "GK2011": { "name": "GK2011", @@ -12119,7 +12281,7 @@ "name": "GLCMTextures", "version": "0.4.1", "sha256": "1bh5kw46fpgawxgfif3m6vsr2zcngb7n1ass9cdx0cdkb525n7xi", - "depends": ["raster", "Rcpp", "RcppArmadillo", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "raster", "terra"] }, "GLDEX": { "name": "GLDEX", @@ -12131,19 +12293,19 @@ "name": "GLDreg", "version": "1.1.1", "sha256": "1cp5mgbvq0g9ss2cv5yincfjvs8jmciz0h3g5jrr8gda1gvf357i", - "depends": ["ddst", "GLDEX"] + "depends": ["GLDEX", "ddst"] }, "GLIDE": { "name": "GLIDE", "version": "1.0.5", "sha256": "01164gh0j4g0hambiq92bxrd3j3z2psg19faj32mvhmn4c3k2m8i", - "depends": ["doParallel", "foreach", "MASS"] + "depends": ["MASS", "doParallel", "foreach"] }, "GLMMRR": { "name": "GLMMRR", "version": "0.5.0", "sha256": "072zwi1rs6d84iszn09v5g19bkpla19nfqk4pq40ad8368zkbhcm", - "depends": ["lattice", "lme4", "RColorBrewer"] + "depends": ["RColorBrewer", "lattice", "lme4"] }, "GLMMadaptive": { "name": "GLMMadaptive", @@ -12167,19 +12329,19 @@ "name": "GLMaSPU", "version": "1.0", "sha256": "0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g", - "depends": ["MASS", "mnormt", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "mnormt", "mvtnorm"] }, "GLMcat": { "name": "GLMcat", "version": "0.2.6", "sha256": "0izxa3ifwpqyyzy69hhhzf379ns1hswfa36ky2izawpyqk5h15ci", - "depends": ["BH", "ordinal", "Rcpp", "RcppEigen", "stringr"] + "depends": ["BH", "Rcpp", "RcppEigen", "ordinal", "stringr"] }, "GLMpack": { "name": "GLMpack", "version": "0.1.0", "sha256": "15bpw42y999ljdw8ka2ysrrm0y73xz37wwi3j67i01wafipq82xy", - "depends": ["AER", "censReg", "effects", "foreign", "lme4", "lmtest", "MASS", "Matrix", "nnet", "pBrackets", "plm", "pscl", "sandwich"] + "depends": ["AER", "MASS", "Matrix", "censReg", "effects", "foreign", "lme4", "lmtest", "nnet", "pBrackets", "plm", "pscl", "sandwich"] }, "GLMsData": { "name": "GLMsData", @@ -12203,7 +12365,7 @@ "name": "GMCM", "version": "1.4", "sha256": "13ds8da7lqkvm1mz75440hmn9smi9pznb8bknmckg8vd3fc70f6x", - "depends": ["ellipse", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ellipse"] }, "GMDH": { "name": "GMDH", @@ -12215,7 +12377,7 @@ "name": "GMDH2", "version": "1.8", "sha256": "1cqpwnncxir9gc6vwzclm0av9hzd2a74xvl3w73dpzafvzkg4x67", - "depends": ["e1071", "glmnet", "magrittr", "MASS", "nnet", "plotly", "randomForest", "xtable"] + "depends": ["MASS", "e1071", "glmnet", "magrittr", "nnet", "plotly", "randomForest", "xtable"] }, "GMDHreg": { "name": "GMDHreg", @@ -12233,7 +12395,7 @@ "name": "GMMAT", "version": "1.4.2", "sha256": "151bc1mn69kmswkn6i5czmadsnymkw4yvgph8s7z3i6xc66r8s5y", - "depends": ["CompQuadForm", "data_table", "foreach", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["CompQuadForm", "Matrix", "Rcpp", "RcppArmadillo", "data_table", "foreach"] }, "GMMBoost": { "name": "GMMBoost", @@ -12269,13 +12431,13 @@ "name": "GNE", "version": "0.99-5", "sha256": "0a796zppqvjgymh03xh7wdb26m0ir2gsavm37278liaj3nzk2jkz", - "depends": ["alabama", "BB", "nleqslv", "SQUAREM"] + "depends": ["BB", "SQUAREM", "alabama", "nleqslv"] }, "GNRS": { "name": "GNRS", "version": "0.3.4", "sha256": "0aq6rq5b3jq9yj8hhyxjin38f2008qsix4zm20nyhqx0k0hizql1", - "depends": ["httr", "jsonlite", "RCurl"] + "depends": ["RCurl", "httr", "jsonlite"] }, "GNSSseg": { "name": "GNSSseg", @@ -12305,13 +12467,13 @@ "name": "GOplot", "version": "1.0.2", "sha256": "1y8dv0kbzpr9za91njw0x233vx5d13vqml9hmpddcyi9s6va5nix", - "depends": ["ggdendro", "ggplot2", "gridExtra", "RColorBrewer"] + "depends": ["RColorBrewer", "ggdendro", "ggplot2", "gridExtra"] }, "GOxploreR": { "name": "GOxploreR", "version": "1.2.7", "sha256": "0878czn9fyjh52a8qwmffl47x1jy8pw4m35wzicxj7k7ck58ws9k", - "depends": ["annotate", "biomaRt", "dplyr", "ggplot2", "ggraph", "GO_db", "gontr", "igraph", "network"] + "depends": ["GO_db", "annotate", "biomaRt", "dplyr", "ggplot2", "ggraph", "gontr", "igraph", "network"] }, "GPArotateDF": { "name": "GPArotateDF", @@ -12335,25 +12497,25 @@ "name": "GPCERF", "version": "0.2.4", "sha256": "0nzfd0sz73sb4903vpgix9m767np1prcmi3m1y3pq6dzmxmqzh6a", - "depends": ["cowplot", "ggplot2", "logger", "MASS", "Rcpp", "RcppArmadillo", "Rfast", "rlang", "spatstat_geom", "SuperLearner", "wCorr", "xgboost"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rfast", "SuperLearner", "cowplot", "ggplot2", "logger", "rlang", "spatstat_geom", "wCorr", "xgboost"] }, "GPCMlasso": { "name": "GPCMlasso", "version": "0.1-7", "sha256": "0hlhm780xyila4idk5r87pw046xi3lxhhpr0a22smhf4klvnlfgc", - "depends": ["caret", "cubature", "ltm", "mirt", "mvtnorm", "Rcpp", "RcppArmadillo", "statmod", "TeachingDemos"] + "depends": ["Rcpp", "RcppArmadillo", "TeachingDemos", "caret", "cubature", "ltm", "mirt", "mvtnorm", "statmod"] }, "GPFDA": { "name": "GPFDA", "version": "3.1.3", "sha256": "0s5jq2vmz02yr1wd79s6h5c8rvpbkdlnhdy5yfckk5nxddabcymb", - "depends": ["fda", "fda_usc", "fields", "interp", "mgcv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "fda", "fda_usc", "fields", "interp", "mgcv"] }, "GPGame": { "name": "GPGame", "version": "1.2.0", "sha256": "1xxilr1ify9ip3vs000jawxplcbf1vqli40frhnwwjqf01kj8jq5", - "depends": ["DiceDesign", "DiceKriging", "GPareto", "KrigInv", "MASS", "matrixStats", "mnormt", "mvtnorm", "Rcpp"] + "depends": ["DiceDesign", "DiceKriging", "GPareto", "KrigInv", "MASS", "Rcpp", "matrixStats", "mnormt", "mvtnorm"] }, "GPIC": { "name": "GPIC", @@ -12377,7 +12539,7 @@ "name": "GPM", "version": "3.0.1", "sha256": "01vd68w5pnwhng83x5i0k9c5fhsn9siyzzndkvkmpis4mjm42sgv", - "depends": ["doParallel", "foreach", "iterators", "lattice", "lhs", "pracma", "randtoolbox", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "iterators", "lattice", "lhs", "pracma", "randtoolbox"] }, "GPP": { "name": "GPP", @@ -12395,7 +12557,7 @@ "name": "GPSCDF", "version": "0.1.1", "sha256": "1l50a6p81lykiqlqiwb6kix5s6wzwdi8vddqhl418dlwlsh83ybf", - "depends": ["dplyr", "MASS", "nbpMatching", "nnet", "survival"] + "depends": ["MASS", "dplyr", "nbpMatching", "nnet", "survival"] }, "GPSeqClus": { "name": "GPSeqClus", @@ -12413,7 +12575,7 @@ "name": "GPareto", "version": "1.1.8", "sha256": "1grs7pxxl9nymmg1qx8a7ln25c2bz47bv06pahq7ackhsh6zlvk9", - "depends": ["DiceDesign", "DiceKriging", "emoa", "KrigInv", "ks", "MASS", "pbivnorm", "pso", "randtoolbox", "Rcpp", "rgenoud", "rgl"] + "depends": ["DiceDesign", "DiceKriging", "KrigInv", "MASS", "Rcpp", "emoa", "ks", "pbivnorm", "pso", "randtoolbox", "rgenoud", "rgl"] }, "GPfit": { "name": "GPfit", @@ -12431,13 +12593,13 @@ "name": "GPvam", "version": "3.1-0", "sha256": "0mmwg5m85rzaaj8wdxsdn1yqpl08pr3ydmxpfwmm2f7xw0k2k29g", - "depends": ["Matrix", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "numDeriv"] }, "GPvecchia": { "name": "GPvecchia", "version": "0.1.7", "sha256": "1dvixffrn3vz98n8p7vqqr9l77m8n1gij5za8z2hfpg78pipa0mi", - "depends": ["BH", "fields", "FNN", "GpGp", "Matrix", "Rcpp", "RcppArmadillo", "sparseinv"] + "depends": ["BH", "FNN", "GpGp", "Matrix", "Rcpp", "RcppArmadillo", "fields", "sparseinv"] }, "GRAPE": { "name": "GRAPE", @@ -12467,19 +12629,19 @@ "name": "GREENeR", "version": "1.0.0", "sha256": "18li2xs12gi4c1wsjxdqbjfyw81xsmgnljdrlgj9fdw91w3f9bzw", - "depends": ["classInt", "data_table", "dplyr", "FME", "ggplot2", "gridExtra", "magrittr", "networkD3", "parallelly", "reshape2", "sf", "tidyselect", "tmap"] + "depends": ["FME", "classInt", "data_table", "dplyr", "ggplot2", "gridExtra", "magrittr", "networkD3", "parallelly", "reshape2", "sf", "tidyselect", "tmap"] }, "GREMLINS": { "name": "GREMLINS", "version": "0.2.1", "sha256": "16l2mzd6xm2yk1hs5333w9lfz7iymkwmi3k80yxal9dxqh5hajkb", - "depends": ["aricode", "blockmodels", "igraph", "pbmcapply", "R6"] + "depends": ["R6", "aricode", "blockmodels", "igraph", "pbmcapply"] }, "GRIDCOPULA": { "name": "GRIDCOPULA", "version": "1.0.1", "sha256": "0d8zibd27z0krn564ba906zlvnb1fx4mfvhpii7pxr0pzjir2a9c", - "depends": ["evmix", "fields", "ggplot2", "limSolve", "pracma", "reshape2", "Rsolnp"] + "depends": ["Rsolnp", "evmix", "fields", "ggplot2", "limSolve", "pracma", "reshape2"] }, "GRNNs": { "name": "GRNNs", @@ -12503,7 +12665,7 @@ "name": "GRShiny", "version": "1.0.0", "sha256": "0i8qcqk97lm2pwjl2s6lfa4p6c69p8xl3q88bpn706ib687f5j3x", - "depends": ["bslib", "data_table", "dplyr", "DT", "flextable", "ggplot2", "gt", "lavaan", "magrittr", "MASS", "mirt", "officer", "openxlsx", "purrr", "readr", "sass", "shiny", "shinyWidgets", "sirt", "stringr", "tidyr"] + "depends": ["DT", "MASS", "bslib", "data_table", "dplyr", "flextable", "ggplot2", "gt", "lavaan", "magrittr", "mirt", "officer", "openxlsx", "purrr", "readr", "sass", "shiny", "shinyWidgets", "sirt", "stringr", "tidyr"] }, "GRSxE": { "name": "GRSxE", @@ -12551,7 +12713,7 @@ "name": "GSD", "version": "1.0.0", "sha256": "0qfn797wllkv44d55nhvm9mf4mxnxihckfbcd6l15irildnj9llg", - "depends": ["EbayesThresh", "ggplot2", "igraph", "Matrix"] + "depends": ["EbayesThresh", "Matrix", "ggplot2", "igraph"] }, "GSDA": { "name": "GSDA", @@ -12563,13 +12725,13 @@ "name": "GSE", "version": "4.2-1", "sha256": "0hxz2m8fn7zkxchvpn0kdw77mxgczff9mk1k0xy2ml50b9vzssm2", - "depends": ["cellWise", "ggplot2", "MASS", "Rcpp", "RcppArmadillo", "robustbase", "rrcov"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "cellWise", "ggplot2", "robustbase", "rrcov"] }, "GSED": { "name": "GSED", "version": "2.6", "sha256": "1k8axyzk55d8idn65qj3gxqjsk27n2r0q78v7524mg8n3fhxs0wj", - "depends": ["memoise", "R_utils", "rootSolve", "survival"] + "depends": ["R_utils", "memoise", "rootSolve", "survival"] }, "GSM": { "name": "GSM", @@ -12585,9 +12747,9 @@ }, "GSODR": { "name": "GSODR", - "version": "4.0.0", - "sha256": "1c8hsan8jsqz303pwd8bm4xy98qwfdj1nf96dybq0c6yg101fhvf", - "depends": ["countrycode", "curl", "data_table", "R_utils"] + "version": "4.1.1", + "sha256": "1q4jpv38x4z7bdqy49iaxgsfvy0iiicfvc4w8mpj0qjm9cj81gym", + "depends": ["R_utils", "countrycode", "curl", "data_table"] }, "GSSE": { "name": "GSSE", @@ -12599,19 +12761,19 @@ "name": "GSSTDA", "version": "1.0.0", "sha256": "0ah19qf6lfzlw52w43b5qszsxh2yvpz7vnspgvj4qidysbxkxd3q", - "depends": ["circlize", "cluster", "ComplexHeatmap", "devtools", "survival", "visNetwork"] + "depends": ["ComplexHeatmap", "circlize", "cluster", "devtools", "survival", "visNetwork"] }, "GSelection": { "name": "GSelection", "version": "0.1.0", "sha256": "052vh1haxlzbh3c5i24nrwphapik1y8ribmh6q4axd447ggc0ff9", - "depends": ["gdata", "penalized", "SAM"] + "depends": ["SAM", "gdata", "penalized"] }, "GSparO": { "name": "GSparO", "version": "1.0", "sha256": "0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0", - "depends": ["ggplot2", "ThreeWay"] + "depends": ["ThreeWay", "ggplot2"] }, "GTDL": { "name": "GTDL", @@ -12621,15 +12783,15 @@ }, "GUD": { "name": "GUD", - "version": "0.0.5", - "sha256": "0h8ihaph1lwnzzayn3ks09xvjxg2c57048az29zmc2paxbz0mwq3", - "depends": ["BH", "MASS", "posterior", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "version": "1.0.2", + "sha256": "0sbimcsclibjgilwy3p7h5lcz9dcvvfi36pcx9zkbdk765w5d5zg", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "posterior", "rstan", "rstantools"] }, "GUEST": { "name": "GUEST", - "version": "0.1.0", - "sha256": "1fbad8kf0l69mzagiagf7i5dk7sq8a8qazfxywzppz7xy15acy42", - "depends": ["GGally", "network", "XICOR"] + "version": "0.2.0", + "sha256": "045cb9k99mrnx8c6xrshsca6dlyw3wqj57i5j34cjz39g4bmwxl6", + "depends": ["GGally", "XICOR", "network"] }, "GUIDE": { "name": "GUIDE", @@ -12641,13 +12803,13 @@ "name": "GUILDS", "version": "1.4.6", "sha256": "0rjlx13shzmamxzqng0qjl5kwzg111lq245y9z6axb3al3ly59ij", - "depends": ["nloptr", "pracma", "Rcpp"] + "depends": ["Rcpp", "nloptr", "pracma"] }, "GUIProfiler": { "name": "GUIProfiler", "version": "2.0.1", "sha256": "10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r", - "depends": ["graph", "MASS", "Nozzle_R1", "proftools", "Rgraphviz", "rstudioapi"] + "depends": ["MASS", "Nozzle_R1", "Rgraphviz", "graph", "proftools", "rstudioapi"] }, "GUTS": { "name": "GUTS", @@ -12659,7 +12821,7 @@ "name": "GUniFrac", "version": "1.8", "sha256": "1yw0d8hb7s662xy0dny9ygvx9gwh7yj8dxw4897zy7zyjhzim95f", - "depends": ["ape", "dirmult", "foreach", "ggplot2", "ggrepel", "inline", "MASS", "Matrix", "matrixStats", "modeest", "Rcpp", "rmutil", "statmod", "vegan"] + "depends": ["MASS", "Matrix", "Rcpp", "ape", "dirmult", "foreach", "ggplot2", "ggrepel", "inline", "matrixStats", "modeest", "rmutil", "statmod", "vegan"] }, "GVARX": { "name": "GVARX", @@ -12683,19 +12845,19 @@ "name": "GWASinlps", "version": "2.2", "sha256": "1q5gaam554r2wxwsdgxjx6hngs2q850hbrkz8y5248i46pz16pcc", - "depends": ["fastglm", "horseshoe", "mombf", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "fastglm", "horseshoe", "mombf", "survival"] }, "GWASinspector": { "name": "GWASinspector", "version": "1.7.1", "sha256": "16q5r3fzli7vml481fl56mzhl0w8bp0bp70rlsw20a6vzhnk5xf2", - "depends": ["data_table", "futile_logger", "ggplot2", "gridExtra", "hash", "ini", "kableExtra", "knitr", "openxlsx", "R_utils", "rmarkdown", "RSQLite"] + "depends": ["RSQLite", "R_utils", "data_table", "futile_logger", "ggplot2", "gridExtra", "hash", "ini", "kableExtra", "knitr", "openxlsx", "rmarkdown"] }, "GWEX": { "name": "GWEX", "version": "1.1.3", "sha256": "17yd7c8qiqkfhzllrcrrf1az0rq1g6xkggp35zyd04idcjz4c6hf", - "depends": ["abind", "doParallel", "EnvStats", "fGarch", "foreach", "lmomco", "MASS", "mvtnorm", "nleqslv", "Rcpp", "RcppArmadillo", "Renext"] + "depends": ["EnvStats", "MASS", "Rcpp", "RcppArmadillo", "Renext", "abind", "doParallel", "fGarch", "foreach", "lmomco", "mvtnorm", "nleqslv"] }, "GWI": { "name": "GWI", @@ -12713,7 +12875,7 @@ "name": "GWRLASSO", "version": "0.1.0", "sha256": "172gjp4f3i2na53l04ddsz588qmhfs4fwdnbnvpjvkrc8xsp9yf2", - "depends": ["glmnet", "Matrix", "numbers", "qpdf"] + "depends": ["Matrix", "glmnet", "numbers", "qpdf"] }, "GWRM": { "name": "GWRM", @@ -12725,7 +12887,7 @@ "name": "GWSDAT", "version": "3.2.1", "sha256": "0zqln2wnmid2cq5727pkk9lyqs4pb5nml12b5cza1xg0yzp38b6h", - "depends": ["deldir", "digest", "geometry", "Kendall", "lattice", "lubridate", "MASS", "Matrix", "officer", "raster", "readxl", "rhandsontable", "sf", "shiny", "shinycssloaders", "shinydashboard", "shinyjs", "sm", "sp", "splancs", "zoo"] + "depends": ["Kendall", "MASS", "Matrix", "deldir", "digest", "geometry", "lattice", "lubridate", "officer", "raster", "readxl", "rhandsontable", "sf", "shiny", "shinycssloaders", "shinydashboard", "shinyjs", "sm", "sp", "splancs", "zoo"] }, "GWalkR": { "name": "GWalkR", @@ -12735,9 +12897,9 @@ }, "GWmodel": { "name": "GWmodel", - "version": "2.3-2", - "sha256": "16brnvq9r5qcyk5rxrak85hsp76z6l6q0vwg40pyd6444n6qkxhx", - "depends": ["FNN", "Rcpp", "RcppArmadillo", "robustbase", "sf", "sp", "spacetime", "spatialreg", "spdep"] + "version": "2.3-3", + "sha256": "0g6kd8yic2dlm192429ii2rbvjsz1gndbfmg3lglkfpzsw0d0saz", + "depends": ["FNN", "Rcpp", "RcppArmadillo", "RcppEigen", "robustbase", "sf", "sp", "spacetime", "spatialreg", "spdep"] }, "GWnnegPCA": { "name": "GWnnegPCA", @@ -12761,12 +12923,12 @@ "name": "GaMaBioMD", "version": "0.2.0", "sha256": "15rx6xycnxldaxyjhcgysfz7zj6cjwlfkjjm6jyhxxvw4h2nw75m", - "depends": ["ape", "Biostrings", "dendextend", "dplyr", "ggplot2", "heatmaply", "magrittr", "reshape2", "traits"] + "depends": ["Biostrings", "ape", "dendextend", "dplyr", "ggplot2", "heatmaply", "magrittr", "reshape2", "traits"] }, "GaSP": { "name": "GaSP", - "version": "1.0.5", - "sha256": "1xwh8wmvwsqf0d0zra65gadvbra229daiimz0zqnmlrlga2hdfqp", + "version": "1.0.6", + "sha256": "0hyalvx7j434g4z7imkwn6anl7sp8pp076v6a2bbsy054vh5l59z", "depends": [] }, "GameTheory": { @@ -12791,12 +12953,12 @@ "name": "GauPro", "version": "0.2.12", "sha256": "03v4bhm5c32gql2s0ysxd4r12yjv28ar7nmap55rc38kj66pgzwx", - "depends": ["lbfgs", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "lbfgs"] }, "GaussSuppression": { "name": "GaussSuppression", - "version": "0.8.5", - "sha256": "0f6kq34z7p2qws94lwm0c1bnnys7hq0xzjpnhgnbxski4hc3wxqw", + "version": "0.8.8", + "sha256": "0alfkb9bbixs1h7i2b0vdmkx8g8ncv9wsdkfb6hx9yl4vj9033ra", "depends": ["Matrix", "RegSDC", "SSBtools"] }, "GaussianHMM1d": { @@ -12807,9 +12969,9 @@ }, "GeDS": { "name": "GeDS", - "version": "0.2.2", - "sha256": "09aimlk72x82yxnikb75vj9qpz1qg8a6623i61db0g88csashf8c", - "depends": ["doFuture", "doParallel", "doRNG", "foreach", "future", "MASS", "Matrix", "mboost", "plot3D", "Rcpp", "Rmpfr", "TH_data"] + "version": "0.2.3", + "sha256": "01zi5q78chcd6a3v3506nhnm5nlnpgglaazsf2cr1zdi7xrxgnyr", + "depends": ["MASS", "Matrix", "Rcpp", "Rmpfr", "TH_data", "doFuture", "doParallel", "doRNG", "foreach", "future", "mboost", "plot3D"] }, "GeNetIt": { "name": "GeNetIt", @@ -12821,7 +12983,7 @@ "name": "GenAI", "version": "0.2.0", "sha256": "0qwls17p5nv24wx17yyq42sg903119s5z4hi91czas0l4wh9lnif", - "depends": ["base64enc", "ggplotify", "httr", "jsonlite", "listenv", "magick", "magrittr", "R6"] + "depends": ["R6", "base64enc", "ggplotify", "httr", "jsonlite", "listenv", "magick", "magrittr"] }, "GenAlgo": { "name": "GenAlgo", @@ -12839,13 +13001,13 @@ "name": "GenEst", "version": "1.4.9", "sha256": "0ifqzpqrc9bgg6sp8zx30lvcz9kcbzivw5sf8f3axnwzfia9x376", - "depends": ["DT", "gsl", "gtools", "hellno", "htmltools", "lubridate", "MASS", "matrixStats", "mvtnorm", "Rcpp", "shiny", "shinyjs", "survival"] + "depends": ["DT", "MASS", "Rcpp", "gsl", "gtools", "hellno", "htmltools", "lubridate", "matrixStats", "mvtnorm", "shiny", "shinyjs", "survival"] }, "GenMarkov": { "name": "GenMarkov", "version": "0.2.0", "sha256": "1dqs8wapdpmgqnrf4xgvdmaz74gck23sbnpjxzj2g03gl8k9lq5w", - "depends": ["alabama", "fastDummies", "Hmisc", "matrixcalc", "maxLik", "nnet"] + "depends": ["Hmisc", "alabama", "fastDummies", "matrixcalc", "maxLik", "nnet"] }, "GenOrd": { "name": "GenOrd", @@ -12869,7 +13031,7 @@ "name": "GenTwoArmsTrialSize", "version": "0.0.5", "sha256": "0qf3a19hv860ll28pmx6skphwbn65ia8k0pvb3gzkdz3wlzmd1zw", - "depends": ["dplyr", "Hmisc", "TrialSize"] + "depends": ["Hmisc", "TrialSize", "dplyr"] }, "GenWin": { "name": "GenWin", @@ -12887,7 +13049,7 @@ "name": "GeneCycle", "version": "1.1.5", "sha256": "08pr8xgcznm04c4lhvzv2qnzij5vj7pjzyj9pr1pqpmc977h8dvg", - "depends": ["fdrtool", "longitudinal", "MASS"] + "depends": ["MASS", "fdrtool", "longitudinal"] }, "GeneF": { "name": "GeneF", @@ -12897,9 +13059,9 @@ }, "GeneNMF": { "name": "GeneNMF", - "version": "0.4.0", - "sha256": "0bfqxy7zxd1vdpxnn6sj8xzpmmsn2rcvnac0prqxbd0byj1shfra", - "depends": ["cluster", "NMF", "pheatmap", "RcppML", "Seurat", "viridis"] + "version": "0.6.0", + "sha256": "1szmkfijy84dl0zbr08cw7likqmziwm85dhvhzqvhybd17g9ahlj", + "depends": ["Matrix", "RcppML", "Seurat", "cluster", "irlba", "lsa", "pheatmap", "viridis"] }, "GeneNet": { "name": "GeneNet", @@ -12911,13 +13073,13 @@ "name": "GeneScape", "version": "1.0", "sha256": "1yjz9bc5qy46z6ha9c7khx6mgzyqqbx3aq5w7nqw5zfym1zkfiaq", - "depends": ["corpcor", "MASS"] + "depends": ["MASS", "corpcor"] }, "GeneSelectR": { "name": "GeneSelectR", "version": "1.0.1", "sha256": "0hxdnfhah3a29f00ycanf7ssxm2z7inp9sf72l61ilcrg9bx22hq", - "depends": ["cowplot", "dplyr", "ggplot2", "glue", "magrittr", "RColorBrewer", "reshape2", "reticulate", "rlang", "testthat", "tibble", "tidyr", "tmod"] + "depends": ["RColorBrewer", "cowplot", "dplyr", "ggplot2", "glue", "magrittr", "reshape2", "reticulate", "rlang", "testthat", "tibble", "tidyr", "tmod"] }, "GeneralOaxaca": { "name": "GeneralOaxaca", @@ -12941,13 +13103,13 @@ "name": "GeneralizedUmatrix", "version": "1.2.6", "sha256": "1mzxszsk2mzswndrq0j125l1b5qdmjryg2swb7f2mnipa5k3mqbm", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2"] }, "GeneralizedWendland": { "name": "GeneralizedWendland", "version": "0.6.0", "sha256": "1mwinkjnf7wvsa077nzq641fkrj9y44gzmihhkkfgkjddcjnk4s4", - "depends": ["BH", "fields", "Matrix", "optimParallel", "Rcpp", "RcppEigen", "spam", "spam64"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "fields", "optimParallel", "spam", "spam64"] }, "GenericML": { "name": "GenericML", @@ -12965,19 +13127,19 @@ "name": "GenoScan", "version": "0.1", "sha256": "0p98imfvvz7l94kim3pxypyjs2pbxng4a2nagbafbady82ylr2vi", - "depends": ["data_table", "MASS", "Matrix", "seqminer", "SKAT"] + "depends": ["MASS", "Matrix", "SKAT", "data_table", "seqminer"] }, "GenoTriplo": { "name": "GenoTriplo", - "version": "1.0.4", - "sha256": "0pfq3k4szmkk3swzkcxm99qnmnw1ikknjg21pghgnr3g7437vlmp", - "depends": ["cowplot", "doParallel", "dplyr", "DT", "foreach", "ggplot2", "htmltools", "processx", "rlang", "Rmixmod", "shiny", "shinyBS", "shinythemes", "tidyr"] + "version": "1.1.0", + "sha256": "04v1llw3ppzx9s9cm8wp78n5hpm65bpmkmsliczlp33l91cbspp8", + "depends": ["DT", "Rmixmod", "cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "htmltools", "processx", "rlang", "shiny", "shinyBS", "shinythemes", "tidyr"] }, "GenomeAdmixR": { "name": "GenomeAdmixR", "version": "2.1.7", "sha256": "14qnabg1pj8sg2bvd3k4m467bh1q2zfjr0ljxn1ny031sqwis4cy", - "depends": ["ggplot2", "ggridges", "hierfstat", "Rcpp", "RcppArmadillo", "RcppParallel", "rlang", "stringr", "tibble", "vcfR"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2", "ggridges", "hierfstat", "rlang", "stringr", "tibble", "vcfR"] }, "GenomicTools_fileHandler": { "name": "GenomicTools.fileHandler", @@ -12989,19 +13151,19 @@ "name": "GeoAdjust", "version": "2.0.0", "sha256": "0251672j2vl9jck31zfcqzsyw8pphzs934j8ljjmnw9qqd3gzd2p", - "depends": ["fields", "fmesher", "ggplot2", "Matrix", "RcppEigen", "sf", "SUMMER", "terra", "TMB"] + "depends": ["Matrix", "RcppEigen", "SUMMER", "TMB", "fields", "fmesher", "ggplot2", "sf", "terra"] }, "GeoModels": { "name": "GeoModels", - "version": "2.0.3", - "sha256": "0v3mwngmsqqbjbg1hwl993263r98hb60b5slaa3mhcsbchyfhcwf", - "depends": ["codetools", "data_table", "doFuture", "dotCall64", "FastGP", "fields", "foreach", "future", "hypergeo", "lamW", "mapproj", "nabor", "pbivnorm", "plotrix", "pracma", "progressr", "scatterplot3d", "shape", "sn", "sp", "spam", "VGAM", "zipfR"] + "version": "2.0.4", + "sha256": "0hqj4ddil9qf15vi65lrs6qk4y9v4mdj70iajm734skm95pi1l0l", + "depends": ["FastGP", "VGAM", "codetools", "data_table", "doFuture", "dotCall64", "fields", "foreach", "future", "hypergeo", "lamW", "mapproj", "nabor", "pbivnorm", "plotrix", "pracma", "progressr", "scatterplot3d", "shape", "sn", "sp", "spam", "zipfR"] }, "GeoMongo": { "name": "GeoMongo", "version": "1.0.3", "sha256": "0m5nz5q81jz2v2bl2dbgdbdprrkckxr2c67qn0cg9vms0pi3fawr", - "depends": ["data_table", "geojsonR", "R6", "reticulate"] + "depends": ["R6", "data_table", "geojsonR", "reticulate"] }, "GeoRange": { "name": "GeoRange", @@ -13013,7 +13175,7 @@ "name": "GeoWeightedModel", "version": "1.0.3", "sha256": "1ylfggfqylqi76z3ac95cnxmmw3gzddq2r5qx5w0gjyjvrxr8wsv", - "depends": ["beepr", "cartography", "dplyr", "DT", "GWmodel", "raster", "readxl", "shiny", "shinyalert", "shinyBS", "shinybusy", "shinydashboard", "shinyjs", "shinyWidgets", "sp", "spdep"] + "depends": ["DT", "GWmodel", "beepr", "cartography", "dplyr", "raster", "readxl", "shiny", "shinyBS", "shinyWidgets", "shinyalert", "shinybusy", "shinydashboard", "shinyjs", "sp", "spdep"] }, "GeodRegr": { "name": "GeodRegr", @@ -13023,21 +13185,21 @@ }, "GeomArchetypal": { "name": "GeomArchetypal", - "version": "1.0.1", - "sha256": "112drwxh4khcplrf3krf97v2wxf5qvfgm58mjaswjcdk1zkjdfi0", - "depends": ["abind", "archetypal", "distances", "doParallel", "dplyr", "geometry", "magrittr", "Matrix", "mirai", "plot3D", "rlang", "scales"] + "version": "1.0.2", + "sha256": "072llxc2chj5acbpyg5h9hyi9mrwr0s7xg508bs2sxjx4s77kf5l", + "depends": ["Matrix", "abind", "archetypal", "distances", "doParallel", "dplyr", "geometry", "magrittr", "mirai", "plot3D", "rlang", "scales"] }, "GeomComb": { "name": "GeomComb", "version": "1.0", "sha256": "05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r", - "depends": ["forecast", "ForecastCombinations", "ggplot2", "Matrix", "mtsdi", "psych"] + "depends": ["ForecastCombinations", "Matrix", "forecast", "ggplot2", "mtsdi", "psych"] }, "GerminaR": { "name": "GerminaR", "version": "2.1.4", "sha256": "0f2dbq1adbd5p30kf9bi8qqk2s8da0p65i9a0igm16ckwpam7lkk", - "depends": ["agricolae", "dplyr", "DT", "ggplot2", "purrr", "shiny", "tibble", "tidyr"] + "depends": ["DT", "agricolae", "dplyr", "ggplot2", "purrr", "shiny", "tibble", "tidyr"] }, "GetBCBData": { "name": "GetBCBData", @@ -13049,25 +13211,25 @@ "name": "GetDFPData", "version": "1.6", "sha256": "1yxf1i5bipz16pbydl6qxlalh2zpdiigbxd1qczbjc1z78bl5727", - "depends": ["crayon", "curl", "dplyr", "lubridate", "readr", "reshape2", "stringr", "tibble", "xlsx", "XML"] + "depends": ["XML", "crayon", "curl", "dplyr", "lubridate", "readr", "reshape2", "stringr", "tibble", "xlsx"] }, "GetDFPData2": { "name": "GetDFPData2", "version": "0.6.3", "sha256": "1dc1ks9mrwc8sjmp6fh47hlhhfwvfign6jmf4cxik28q3253al01", - "depends": ["dplyr", "lubridate", "magrittr", "memoise", "purrr", "RCurl", "readr", "rvest", "shiny", "stringr", "tidyr", "writexl", "xml2"] + "depends": ["RCurl", "dplyr", "lubridate", "magrittr", "memoise", "purrr", "readr", "rvest", "shiny", "stringr", "tidyr", "writexl", "xml2"] }, "GetFREData": { "name": "GetFREData", "version": "0.8.1", "sha256": "15rca6pfsx5hcl1lnz49904b2ps0312mwjv8d4f0g76jhkvqfvss", - "depends": ["dplyr", "GetDFPData2", "lubridate", "magrittr", "purrr", "readr", "rvest", "stringr", "XML", "xml2"] + "depends": ["GetDFPData2", "XML", "dplyr", "lubridate", "magrittr", "purrr", "readr", "rvest", "stringr", "xml2"] }, "GetLattesData": { "name": "GetLattesData", "version": "1.5", "sha256": "0gfjqvzn03qxlyf4hj5kzfy8pqbphrw421bqbkb2pksa6gyvnfnq", - "depends": ["curl", "dplyr", "lubridate", "readr", "stringdist", "stringr", "XML"] + "depends": ["XML", "curl", "dplyr", "lubridate", "readr", "stringdist", "stringr"] }, "GetQuandlData": { "name": "GetQuandlData", @@ -13085,7 +13247,7 @@ "name": "GetoptLong", "version": "1.0.5", "sha256": "00fpm6nd3kqa2ikasxa62jzywi46fvvmx1mdavcp5yrxxn37j8wc", - "depends": ["crayon", "GlobalOptions", "rjson"] + "depends": ["GlobalOptions", "crayon", "rjson"] }, "Ghat": { "name": "Ghat", @@ -13103,13 +13265,13 @@ "name": "GhostKnockoff", "version": "0.1.0", "sha256": "0vp9f8k31yclxvmcjgzkg6xl3rdv49anjmwdhcrhcxv8x9f3bdrj", - "depends": ["corpcor", "CVXR", "gtools", "Matrix", "Rdsdp", "RSpectra", "seqminer"] + "depends": ["CVXR", "Matrix", "RSpectra", "Rdsdp", "corpcor", "gtools", "seqminer"] }, "GiNA": { "name": "GiNA", "version": "1.0.1", "sha256": "0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw", - "depends": ["doParallel", "EBImage", "foreach", "png"] + "depends": ["EBImage", "doParallel", "foreach", "png"] }, "GiRaF": { "name": "GiRaF", @@ -13133,13 +13295,13 @@ "name": "GillespieSSA2", "version": "0.3.0", "sha256": "0wjz0fh9cwvaw6n7hs2lkh818jzbjl11ps5gxnjqizz8gfp9fr10", - "depends": ["assertthat", "dplyr", "dynutils", "Matrix", "purrr", "Rcpp", "RcppXPtrUtils", "readr", "rlang", "stringr", "tidyr"] + "depends": ["Matrix", "Rcpp", "RcppXPtrUtils", "assertthat", "dplyr", "dynutils", "purrr", "readr", "rlang", "stringr", "tidyr"] }, "GimmeMyPlot": { "name": "GimmeMyPlot", "version": "0.1.0", "sha256": "18k3z6ynzpmdg029sspl8as0bkifqf8ff6hf9l2yblls7sb64id0", - "depends": ["dplyr", "ggforce", "ggplot2", "ggpubr", "magrittr", "RColorBrewer", "rstatix", "scales", "stringr", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggforce", "ggplot2", "ggpubr", "magrittr", "rstatix", "scales", "stringr", "tidyr"] }, "Gini": { "name": "Gini", @@ -13157,13 +13319,13 @@ "name": "GiniDistance", "version": "0.1.1", "sha256": "1x9a59x60a2jdnql3wn4za510rv9qp84j6b9m6la81j3mmy92vzz", - "depends": ["energy", "randomForest", "Rcpp", "RcppArmadillo", "readxl"] + "depends": ["Rcpp", "RcppArmadillo", "energy", "randomForest", "readxl"] }, "GlarmaVarSel": { "name": "GlarmaVarSel", "version": "1.0", "sha256": "080v2qckihhacclxi2zscslbwbc6179pc7g02lyqaicf9wrsr8ff", - "depends": ["ggplot2", "glmnet", "Matrix"] + "depends": ["Matrix", "ggplot2", "glmnet"] }, "Glarmadillo": { "name": "Glarmadillo", @@ -13175,7 +13337,7 @@ "name": "GlmSimulatoR", "version": "1.0.0", "sha256": "1xfbmxsdlgpwlss5bfb4arlnblj4s6pzyn9npy04v5aara1m04na", - "depends": ["assertthat", "cplm", "dplyr", "ggplot2", "magrittr", "MASS", "statmod", "stringr", "tweedie"] + "depends": ["MASS", "assertthat", "cplm", "dplyr", "ggplot2", "magrittr", "statmod", "stringr", "tweedie"] }, "GlobalOptions": { "name": "GlobalOptions", @@ -13187,13 +13349,13 @@ "name": "Gmedian", "version": "1.2.7", "sha256": "0m9fp54y4m1xxjqphpnxhw2hspzdca9qc9l60znpnynyj5m6cy2k", - "depends": ["Rcpp", "RcppArmadillo", "robustbase", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "robustbase"] }, "Gmisc": { "name": "Gmisc", "version": "3.0.3", "sha256": "1s8gkqg54622xhsmhl7n5pff2b6xfij111m7h3i4inzfjfmziq43", - "depends": ["abind", "checkmate", "forestplot", "glue", "Hmisc", "htmlTable", "knitr", "lattice", "lubridate", "magrittr", "Rcpp", "rlang", "rmarkdown", "stringr", "XML", "yaml"] + "depends": ["Hmisc", "Rcpp", "XML", "abind", "checkmate", "forestplot", "glue", "htmlTable", "knitr", "lattice", "lubridate", "magrittr", "rlang", "rmarkdown", "stringr", "yaml"] }, "GmptzCurve": { "name": "GmptzCurve", @@ -13209,15 +13371,15 @@ }, "GofCens": { "name": "GofCens", - "version": "1.0", - "sha256": "1kflcbydh2p78fqdfz35gp0jsp6xl2823mvsqq0yany9294bdqmr", + "version": "1.1", + "sha256": "1xixv05wlwlyga5br9jzrg68rhc71ibhfbyjkmiy0dh9xwyrygsy", "depends": ["actuar", "boot", "fitdistrplus", "ggplot2", "gridExtra", "survival", "survminer"] }, "GofKmt": { "name": "GofKmt", "version": "2.2.0", "sha256": "1v9n1hfracincgaip7pym2l9h54azajw4fmsld0ff2rsd5np362z", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "Rsolnp"] + "depends": ["Rcpp", "RcppArmadillo", "Rsolnp", "ggplot2"] }, "GomoGomonoMi": { "name": "GomoGomonoMi", @@ -13271,13 +13433,13 @@ "name": "GrabSVG", "version": "0.0.2", "sha256": "0w53wwaaap90shm17jjkyvcx55cpvpmd9cp9f7cbf36v73n74wjm", - "depends": ["fitdistrplus", "Matrix", "RANN", "spam", "sparseMatrixStats"] + "depends": ["Matrix", "RANN", "fitdistrplus", "spam", "sparseMatrixStats"] }, "Grace": { "name": "Grace", "version": "0.5.3", "sha256": "0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0", - "depends": ["glmnet", "MASS", "scalreg"] + "depends": ["MASS", "glmnet", "scalreg"] }, "GramQuad": { "name": "GramQuad", @@ -13301,7 +13463,7 @@ "name": "GreedyExperimentalDesign", "version": "1.5.6.1", "sha256": "057wpfg5kfgcvfgry12agn7arg917jwgvxhjz6q1na13y8pmqnrv", - "depends": ["checkmate", "kernlab", "nbpMatching", "Rcpp", "rJava", "rlist", "stringi", "stringr", "survey"] + "depends": ["Rcpp", "checkmate", "kernlab", "nbpMatching", "rJava", "rlist", "stringi", "stringr", "survey"] }, "GreedyExperimentalDesignJARs": { "name": "GreedyExperimentalDesignJARs", @@ -13313,7 +13475,7 @@ "name": "Greg", "version": "2.0.2", "sha256": "13rsah8vf9s8wpkr5hlayyqa8v728cz80bvpg8vmlvnam8isb30s", - "depends": ["broom", "dplyr", "Epi", "forestplot", "glue", "Gmisc", "Hmisc", "htmlTable", "knitr", "nlme", "purrr", "rlang", "rms", "sandwich", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Epi", "Gmisc", "Hmisc", "broom", "dplyr", "forestplot", "glue", "htmlTable", "knitr", "nlme", "purrr", "rlang", "rms", "sandwich", "stringr", "tibble", "tidyr", "tidyselect"] }, "GregoryQuadrature": { "name": "GregoryQuadrature", @@ -13331,13 +13493,13 @@ "name": "Greymodels", "version": "2.0.1", "sha256": "0gv4kqgn10l3pknx7w26yas1h70gsb2h8a82w2ykxs134xl4vpll", - "depends": ["cmna", "dplyr", "expm", "ggplot2", "Metrics", "particle_swarm_optimisation", "plotly", "readxl", "scales", "shiny", "shinydashboard", "shinyWidgets"] + "depends": ["Metrics", "cmna", "dplyr", "expm", "ggplot2", "particle_swarm_optimisation", "plotly", "readxl", "scales", "shiny", "shinyWidgets", "shinydashboard"] }, "GridOnClusters": { "name": "GridOnClusters", "version": "0.1.0.1", "sha256": "1zanz8p5ghy7q7dsazv6wfkf5gl2dnbmchw88drbrip1h85gxyid", - "depends": ["Ckmeans_1d_dp", "cluster", "dqrng", "fossil", "mclust", "plotrix", "Rcpp", "Rdpack"] + "depends": ["Ckmeans_1d_dp", "Rcpp", "Rdpack", "cluster", "dqrng", "fossil", "mclust", "plotrix"] }, "GrimR": { "name": "GrimR", @@ -13349,7 +13511,7 @@ "name": "GroupBN", "version": "1.2.0", "sha256": "0x41x7npaawnh6nxh4d4vmv2zwzc6c5ijrhh6fdpwzl4p75qlh1x", - "depends": ["arules", "bnlearn", "ClustOfVar", "magrittr", "MLmetrics", "PCAmixdata", "plyr", "PRROC", "rlist", "stringr", "visNetwork", "zoo"] + "depends": ["ClustOfVar", "MLmetrics", "PCAmixdata", "PRROC", "arules", "bnlearn", "magrittr", "plyr", "rlist", "stringr", "visNetwork", "zoo"] }, "GroupComparisons": { "name": "GroupComparisons", @@ -13379,13 +13541,13 @@ "name": "GrpString", "version": "0.3.2", "sha256": "14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1", - "depends": ["cluster", "plyr", "Rcpp"] + "depends": ["Rcpp", "cluster", "plyr"] }, "GseaVis": { "name": "GseaVis", "version": "0.0.5", "sha256": "01c5rl05lf9abmasw9w8rxlgl55jr3faiwi1ndx993r3j8xvbcqj", - "depends": ["aplot", "DOSE", "dplyr", "ggplot2", "ggpp", "ggrepel", "ggsci", "magrittr", "purrr", "RColorBrewer", "reshape2", "stringr", "tibble"] + "depends": ["DOSE", "RColorBrewer", "aplot", "dplyr", "ggplot2", "ggpp", "ggrepel", "ggsci", "magrittr", "purrr", "reshape2", "stringr", "tibble"] }, "GsymPoint": { "name": "GsymPoint", @@ -13403,7 +13565,7 @@ "name": "GxEScanR", "version": "2.0.2", "sha256": "0k3avad4b2x4sqv8iilx5a8gkybjlipx50mj0la4kl9xv0azshkd", - "depends": ["prodlim", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "prodlim"] }, "GxEprs": { "name": "GxEprs", @@ -13427,13 +13589,13 @@ "name": "HACSim", "version": "1.0.6-1", "sha256": "0hdczpn1x6zcxya8qlp82fzzpli3z2kfvynk5sqk97h1d55d27i4", - "depends": ["ape", "data_table", "matrixStats", "pegas", "Rcpp", "RcppArmadillo", "shiny"] + "depends": ["Rcpp", "RcppArmadillo", "ape", "data_table", "matrixStats", "pegas", "shiny"] }, "HBSTM": { "name": "HBSTM", "version": "1.0.2", "sha256": "1rw0sav1xrw5sraah3yhw5ypyf99pi9h323nf02qidqfzr9xb214", - "depends": ["fBasics", "maps", "MASS"] + "depends": ["MASS", "fBasics", "maps"] }, "HBV_IANIGLA": { "name": "HBV.IANIGLA", @@ -13445,7 +13607,7 @@ "name": "HCD", "version": "1.0", "sha256": "0f0kn2n1g25akwdbysy5xpxfcnpfdxgjzyd7ji6f58cs40q6gl28", - "depends": ["data_table", "data_tree", "dendextend", "irlba", "Matrix", "randnet", "RSpectra", "stringr"] + "depends": ["Matrix", "RSpectra", "data_table", "data_tree", "dendextend", "irlba", "randnet", "stringr"] }, "HCR": { "name": "HCR", @@ -13463,13 +13625,13 @@ "name": "HCTDesign", "version": "0.7.2", "sha256": "1nncyyw1dlbdl9f1pncwa9xdqrd7w2aw4ghnf01vwyq0m7pj90l1", - "depends": ["crayon", "diversitree", "flexsurv", "mvtnorm", "Rdpack", "survival"] + "depends": ["Rdpack", "crayon", "diversitree", "flexsurv", "mvtnorm", "survival"] }, "HCTR": { "name": "HCTR", "version": "0.1.1", "sha256": "1hg8mpallwxpmamk6q8x87w5hlqqwvbahfw5zmr9pisiagbwcsay", - "depends": ["glmnet", "harmonicmeanp", "MASS", "ncvreg", "Rdpack"] + "depends": ["MASS", "Rdpack", "glmnet", "harmonicmeanp", "ncvreg"] }, "HCmodelSets": { "name": "HCmodelSets", @@ -13481,19 +13643,19 @@ "name": "HDBRR", "version": "1.1.4", "sha256": "03jl1m099z6gj2ipi7rnjnrd2rmk4zs54332rwlqyf40dv7ndbz1", - "depends": ["bigstatsr", "MASS", "numDeriv"] + "depends": ["MASS", "bigstatsr", "numDeriv"] }, "HDCD": { "name": "HDCD", "version": "1.1", "sha256": "01fxai59mi5hrjv0yx8f4cd6c5pin87n2sry2lk3w041c7df21gs", - "depends": ["mclust", "Rdpack"] + "depends": ["Rdpack", "mclust"] }, "HDCI": { "name": "HDCI", "version": "1.0-2", "sha256": "0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz", - "depends": ["doParallel", "foreach", "glmnet", "iterators", "lattice", "Matrix", "mvtnorm", "slam"] + "depends": ["Matrix", "doParallel", "foreach", "glmnet", "iterators", "lattice", "mvtnorm", "slam"] }, "HDCurves": { "name": "HDCurves", @@ -13535,7 +13697,7 @@ "name": "HDMAADMM", "version": "0.0.1", "sha256": "0whcd0315cxn45ilsrh11baylrxvk0w4vcsqk6sps6fcpg4m2ak5", - "depends": ["dqrng", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "dqrng"] }, "HDMFA": { "name": "HDMFA", @@ -13553,7 +13715,7 @@ "name": "HDNRA", "version": "1.0.0", "sha256": "17c2bck5s68kn7b67g5pgxd14n13313899waynn79vnkl319czq9", - "depends": ["expm", "Rcpp", "RcppArmadillo", "Rdpack", "readr"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "expm", "readr"] }, "HDOMDesign": { "name": "HDOMDesign", @@ -13563,15 +13725,15 @@ }, "HDRFA": { "name": "HDRFA", - "version": "0.1.4", - "sha256": "1dwys28vj5icv33x9zy4r62dslvwr1ajv29gs9lkalrc2wjh2qx2", + "version": "0.1.5", + "sha256": "00rggyq5sz73jnv4s8zfjw6hx08fw0qaadw0rng695ri17m0czxg", "depends": ["pracma", "quantreg"] }, "HDShOP": { "name": "HDShOP", "version": "0.1.5", "sha256": "129j1dr3vjdg23dy45wws470v05j5azq8nq88b670kdgfw1586qm", - "depends": ["lattice", "Rdpack"] + "depends": ["Rdpack", "lattice"] }, "HDSinRdata": { "name": "HDSinRdata", @@ -13583,7 +13745,7 @@ "name": "HDSpatialScan", "version": "1.0.4", "sha256": "1hwqdwr4jl887sgnjwq3gmxjhk6zz45nasvy3x7i7rmrqylxig60", - "depends": ["DT", "fmsb", "matrixStats", "pbapply", "plotrix", "purrr", "raster", "Rcpp", "RcppArmadillo", "sf", "sp", "SpatialNP", "swfscMisc", "TeachingDemos"] + "depends": ["DT", "Rcpp", "RcppArmadillo", "SpatialNP", "TeachingDemos", "fmsb", "matrixStats", "pbapply", "plotrix", "purrr", "raster", "sf", "sp", "swfscMisc"] }, "HDStIM": { "name": "HDStIM", @@ -13595,13 +13757,13 @@ "name": "HDTSA", "version": "1.0.3", "sha256": "1syrqygfdr12sd32wq2ab0gibwbljlbrwzzkfnmhgh8js9dxv6j8", - "depends": ["clime", "geigen", "jointDiag", "MASS", "Rcpp", "RcppEigen", "sandwich"] + "depends": ["MASS", "Rcpp", "RcppEigen", "clime", "geigen", "jointDiag", "sandwich"] }, "HDXBoxeR": { "name": "HDXBoxeR", "version": "0.0.1", "sha256": "10p41sawddrdpj5sji1jzp63hr6v6hvihb4n3yzci5wvh2a2lx9c", - "depends": ["dplyr", "RColorBrewer", "stringr", "tidyr", "wrapr"] + "depends": ["RColorBrewer", "dplyr", "stringr", "tidyr", "wrapr"] }, "HDclassif": { "name": "HDclassif", @@ -13625,13 +13787,13 @@ "name": "HDiR", "version": "1.1.3", "sha256": "1qwd3y9645m8v2gdrb4xjpq86ixs9rgrw7iv3m5lm7nnf87qm350", - "depends": ["circular", "Directional", "movMF", "NPCirc", "rgl"] + "depends": ["Directional", "NPCirc", "circular", "movMF", "rgl"] }, "HDoutliers": { "name": "HDoutliers", "version": "1.0.4", "sha256": "0vc3g36cghs2ln8a3pb344b3vw1jpz9r8ld77ldd898vg9rhkq2m", - "depends": ["FactoMineR", "FNN", "mclust"] + "depends": ["FNN", "FactoMineR", "mclust"] }, "HDtweedie": { "name": "HDtweedie", @@ -13649,7 +13811,7 @@ "name": "HEMDAG", "version": "2.7.4", "sha256": "1dmfy5bbnjmjb4d7430i38z9hvpcrwafj6hw46118hwzcl4b6ldv", - "depends": ["doParallel", "foreach", "graph", "plyr", "precrec", "preprocessCore", "RBGL"] + "depends": ["RBGL", "doParallel", "foreach", "graph", "plyr", "precrec", "preprocessCore"] }, "HETOP": { "name": "HETOP", @@ -13691,13 +13853,13 @@ "name": "HH", "version": "3.1-52", "sha256": "10q3im2y5r9f5d80c35r2mmp89xclaf74hywkcyn3pk5vwc5wjfm", - "depends": ["abind", "colorspace", "gridExtra", "Hmisc", "lattice", "latticeExtra", "leaps", "multcomp", "RColorBrewer", "reshape2", "Rmpfr", "shiny", "vcd"] + "depends": ["Hmisc", "RColorBrewer", "Rmpfr", "abind", "colorspace", "gridExtra", "lattice", "latticeExtra", "leaps", "multcomp", "reshape2", "shiny", "vcd"] }, "HIMA": { "name": "HIMA", "version": "2.2.1", "sha256": "0r9dr3dvav8m8sxk84fm6m8y7fvsbd6dfblma17vizvslxpi5vwm", - "depends": ["conquer", "doParallel", "foreach", "glmnet", "hdi", "HDMT", "hommel", "iterators", "MASS", "ncvreg", "quantreg", "survival"] + "depends": ["HDMT", "MASS", "conquer", "doParallel", "foreach", "glmnet", "hdi", "hommel", "iterators", "ncvreg", "quantreg", "survival"] }, "HK80": { "name": "HK80", @@ -13709,19 +13871,25 @@ "name": "HKRbook", "version": "0.1.3", "sha256": "1bhyhv72c8afyzwx7h6p33mgfvhgqfh5c5f85gj803p6ai60h544", - "depends": ["DT", "formatR", "highlight", "MASS", "scatterplot3d", "shiny", "shinydashboard", "shinydashboardPlus", "shinyWidgets"] + "depends": ["DT", "MASS", "formatR", "highlight", "scatterplot3d", "shiny", "shinyWidgets", "shinydashboard", "shinydashboardPlus"] }, "HKprocess": { "name": "HKprocess", "version": "0.1-1", "sha256": "0kn84ccaypknxymynp6lnr8asd85rlzbk073z7511rriyz96hyj7", - "depends": ["gtools", "MCMCpack"] + "depends": ["MCMCpack", "gtools"] + }, + "HLAtools": { + "name": "HLAtools", + "version": "1.1.1", + "sha256": "0nx2vd2xa5bz5b5pl6vx798ma0109rxyl6gjx5iw12ylh02k9bgq", + "depends": ["DescTools", "dplyr", "fmsb", "stringr", "tibble", "xfun"] }, "HLMdiag": { "name": "HLMdiag", "version": "0.5.0", "sha256": "0yy0qf9iw5gr40vlmm697rvvvgp077f08fialx3ijn0vfpsjbl2v", - "depends": ["diagonals", "dplyr", "ggplot2", "ggrepel", "janitor", "magrittr", "MASS", "Matrix", "mgcv", "plyr", "purrr", "Rcpp", "RcppArmadillo", "reshape2", "rlang", "stringr", "tibble", "tidyselect"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "diagonals", "dplyr", "ggplot2", "ggrepel", "janitor", "magrittr", "mgcv", "plyr", "purrr", "reshape2", "rlang", "stringr", "tibble", "tidyselect"] }, "HMB": { "name": "HMB", @@ -13731,9 +13899,9 @@ }, "HMC": { "name": "HMC", - "version": "1.0", - "sha256": "1zmppanwfdhpvi5pxw067287zy5xw2ipw8p7q7c7b3gq7n3xm4hx", - "depends": ["glmnet", "irlba", "MASS", "PMA"] + "version": "1.1", + "sha256": "0xsf9ry019r21yjfrm1bxkr60dzvmy7lj4is0l5qfr7g0bskg1lc", + "depends": ["MASS", "PMA", "glmnet", "irlba"] }, "HMDHFDplus": { "name": "HMDHFDplus", @@ -13763,7 +13931,7 @@ "name": "HMMmlselect", "version": "0.1.6", "sha256": "0kvw9nihbmvp19hbz5h8sz9jps5ik2di969jxdbp4ymj735c0fc9", - "depends": ["HiddenMarkov", "mclust", "MCMCpack", "mvtnorm", "Rcpp"] + "depends": ["HiddenMarkov", "MCMCpack", "Rcpp", "mclust", "mvtnorm"] }, "HMMpa": { "name": "HMMpa", @@ -13775,18 +13943,18 @@ "name": "HMP", "version": "2.0.1", "sha256": "0233p7gajr2aic0c5snni4g9v1bwn4zd5i3kagxhqxa3mvy5c7wc", - "depends": ["dirmult", "doParallel", "foreach", "ggplot2", "gplots", "lattice", "MASS", "rpart", "rpart_plot", "vegan"] + "depends": ["MASS", "dirmult", "doParallel", "foreach", "ggplot2", "gplots", "lattice", "rpart", "rpart_plot", "vegan"] }, "HMPTrees": { "name": "HMPTrees", "version": "1.4", "sha256": "1jha64iyb0816rdg2i3z7i31z02r72k6acmvw0ibw3sli8zcvphb", - "depends": ["ape", "dirmult", "doParallel", "foreach", "HMP"] + "depends": ["HMP", "ape", "dirmult", "doParallel", "foreach"] }, "HMR": { "name": "HMR", - "version": "1.0.3", - "sha256": "1r0aw3x26a0w1pa02m449bpg6xrp1ikxv44f403snb8k48la9brc", + "version": "1.0.4", + "sha256": "14hhdk8l3kx0388ixa2facrw8h5blry1sxch6sci60g4iwwcwi8v", "depends": [] }, "HMTL": { @@ -13799,7 +13967,7 @@ "name": "HOasso", "version": "1.0.1", "sha256": "07xihcjj3gfxl1fd5x1dvfmfg8m19rfjzq110ay3vrj38sxxvkiw", - "depends": ["igraph", "Rdpack"] + "depends": ["Rdpack", "igraph"] }, "HPLB": { "name": "HPLB", @@ -13839,15 +14007,15 @@ }, "HSAUR3": { "name": "HSAUR3", - "version": "1.0-14", - "sha256": "1fsil4n4s71ff8np9w65h8n8b1b2rh017ja8vjd4wq07xi3prbwp", + "version": "1.0-15", + "sha256": "17yg6ql9c88pg5higmrvhnavx6hcbr4nm5r65d8q3iqfkgnc6ym1", "depends": [] }, "HSDiC": { "name": "HSDiC", "version": "0.1", "sha256": "0wiixb1ylx0l8qfgh5ark6alkdq87xaak1jlxizw1m589vghvqfp", - "depends": ["glmnet", "Matrix", "ncvreg", "quadprog"] + "depends": ["Matrix", "glmnet", "ncvreg", "quadprog"] }, "HSEtest": { "name": "HSEtest", @@ -13865,7 +14033,7 @@ "name": "HTLR", "version": "0.4-4", "sha256": "0mi03r9izipvmla5pm0s42vm85ishr3bb8pjdw906s4q7lkxjivz", - "depends": ["BCBCSF", "glmnet", "magrittr", "Rcpp", "RcppArmadillo"] + "depends": ["BCBCSF", "Rcpp", "RcppArmadillo", "glmnet", "magrittr"] }, "HTMLUtils": { "name": "HTMLUtils", @@ -13889,7 +14057,7 @@ "name": "HTSSIP", "version": "1.4.1", "sha256": "1j2f6f3i4di4bvsk44gxz0narg45ld2rahfn23wpgni5bszy0vb3", - "depends": ["ape", "coenocliner", "DESeq2", "dplyr", "ggplot2", "igraph", "lazyeval", "magrittr", "phyloseq", "plyr", "stringr", "tidyr", "vegan"] + "depends": ["DESeq2", "ape", "coenocliner", "dplyr", "ggplot2", "igraph", "lazyeval", "magrittr", "phyloseq", "plyr", "stringr", "tidyr", "vegan"] }, "HTSeed": { "name": "HTSeed", @@ -13901,19 +14069,19 @@ "name": "HTT", "version": "0.1.2", "sha256": "0345ydb3rjdkj4zm6xr5y4kf6plvxfgbpwkjs81pls99mr208qwz", - "depends": ["ggplot2", "ggraph", "igraph", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "ggraph", "igraph"] }, "HUM": { "name": "HUM", "version": "2.0", "sha256": "06jx3f2zb52gjp05bq3zmgjkyiaa2j9v0biq23gg88gplpign6jw", - "depends": ["gtools", "Rcpp", "rgl"] + "depends": ["Rcpp", "gtools", "rgl"] }, "HVT": { "name": "HVT", "version": "24.5.2", "sha256": "18a4gr2v2qn2n9z9w89pjq1plzdggzlyprh249srf3sbqw1pn1qq", - "depends": ["cluster", "conf_design", "data_table", "deldir", "dplyr", "gganimate", "ggforce", "ggplot2", "gifski", "magrittr", "markovchain", "MASS", "plyr", "polyclip", "purrr", "reshape2", "rlang", "scales", "splancs", "tidyr"] + "depends": ["MASS", "cluster", "conf_design", "data_table", "deldir", "dplyr", "gganimate", "ggforce", "ggplot2", "gifski", "magrittr", "markovchain", "plyr", "polyclip", "purrr", "reshape2", "rlang", "scales", "splancs", "tidyr"] }, "HWEintrinsic": { "name": "HWEintrinsic", @@ -13937,7 +14105,7 @@ "name": "HaDeX", "version": "1.2.2", "sha256": "1qj6n03pd5kd5ff5h4v8wmnqxxylsxx1p6i88nahqkah2mzg9jdr", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "gsubfn", "latex2exp", "readr", "readxl", "reshape2", "shiny", "stringr", "tidyr"] + "depends": ["DT", "data_table", "dplyr", "ggplot2", "gsubfn", "latex2exp", "readr", "readxl", "reshape2", "shiny", "stringr", "tidyr"] }, "HadIBDs": { "name": "HadIBDs", @@ -13967,13 +14135,13 @@ "name": "Hapi", "version": "0.0.3", "sha256": "0jqjhfq38k161kqff5cx0vxpsmjm2y5ca7049mvqiwqwvi4fp08m", - "depends": ["ggplot2", "HMM"] + "depends": ["HMM", "ggplot2"] }, "Haplin": { "name": "Haplin", "version": "7.3.1", "sha256": "0vyykbq2f5w4h7nai8w8krpax8q6v2hx76rr6xqy938rza5rfm79", - "depends": ["ff", "MASS", "mgcv", "rlang"] + "depends": ["MASS", "ff", "mgcv", "rlang"] }, "HaploCatcher": { "name": "HaploCatcher", @@ -13991,7 +14159,7 @@ "name": "HardyWeinberg", "version": "1.7.8", "sha256": "1wddy32zljyya37isqb54sqhpp07s2kizjl36i08pj37bbza7yac", - "depends": ["mice", "nnet", "Rcpp", "Rsolnp", "shape"] + "depends": ["Rcpp", "Rsolnp", "mice", "nnet", "shape"] }, "Harvest_Tree": { "name": "Harvest.Tree", @@ -14015,7 +14183,7 @@ "name": "HazardDiff", "version": "0.1.0", "sha256": "048lvhb4545a487kyknf5b5v8q3a9nsipbh0ii2k3pcc5vfql1h4", - "depends": ["ahaz", "Rdpack", "rootSolve", "survival"] + "depends": ["Rdpack", "ahaz", "rootSolve", "survival"] }, "HealthCal": { "name": "HealthCal", @@ -14027,25 +14195,25 @@ "name": "HeckmanEM", "version": "0.2-1", "sha256": "0rx9lbi5l0h95sg5lhjyrv31qmp4ziam84b98l2a05q56avck9jj", - "depends": ["ggplot2", "MomTrunc", "mvtnorm", "PerformanceAnalytics", "sampleSelection"] + "depends": ["MomTrunc", "PerformanceAnalytics", "ggplot2", "mvtnorm", "sampleSelection"] }, "HellCor": { "name": "HellCor", "version": "1.3", "sha256": "1bzc2ipm7vw7s849d43lcs0xrk2rs67h223dn9kahqg152mmknza", - "depends": ["energy", "FNN", "orthopolynom"] + "depends": ["FNN", "energy", "orthopolynom"] }, "HelpersMG": { "name": "HelpersMG", "version": "6.1", "sha256": "1cggzna2gdl8pxdj2s0swlbwxs9qzz276x43inr87i9yxfqwv5q8", - "depends": ["coda", "ggplot2", "MASS", "Matrix", "rlang"] + "depends": ["MASS", "Matrix", "coda", "ggplot2", "rlang"] }, "HeritSeq": { "name": "HeritSeq", "version": "1.0.2", "sha256": "0jzf3pq43lllxvvmf0rqzxz9fx6931mgb0ipminlw1iakz8wa6w3", - "depends": ["cplm", "DESeq2", "lme4", "MASS", "pbapply", "SummarizedExperiment", "tweedie"] + "depends": ["DESeq2", "MASS", "SummarizedExperiment", "cplm", "lme4", "pbapply", "tweedie"] }, "HeterFunctionalData": { "name": "HeterFunctionalData", @@ -14057,7 +14225,7 @@ "name": "HeteroGGM", "version": "1.0.1", "sha256": "1yz4rwlfhq0lk9zpc1p7yc35d1n1gr0pfdfhlm57kcsi5a8pzlk1", - "depends": ["huge", "igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "huge", "igraph"] }, "HextractoR": { "name": "HextractoR", @@ -14069,7 +14237,7 @@ "name": "HhP", "version": "1.0.0", "sha256": "0rmvw52a7a75gcwsyv30wvxrb9ykhg4ji3pj2jhgbzjqdc4s9xzw", - "depends": ["fmrs", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "fmrs"] }, "HiClimR": { "name": "HiClimR", @@ -14087,7 +14255,7 @@ "name": "HiResTEC", "version": "0.62.3", "sha256": "1wswcd68zy03qcajkywgrgi7c06v1kyj2rmvdxj1s4yc0pcw657q", - "depends": ["beeswarm", "CorMID", "InterpretMSSpectrum", "openxlsx", "plyr"] + "depends": ["CorMID", "InterpretMSSpectrum", "beeswarm", "openxlsx", "plyr"] }, "HiddenMarkov": { "name": "HiddenMarkov", @@ -14097,8 +14265,8 @@ }, "HierPortfolios": { "name": "HierPortfolios", - "version": "1.0.0", - "sha256": "1l0ac3sx7q0xgqv6w0c7rahgjqpy045whih7r88wnj8qqwl1x1bp", + "version": "1.0.1", + "sha256": "0hpr8rxpzgbr1v6fh4wxx140nh2017cvrk8anaczv1rnq75j2bdp", "depends": ["cluster", "fastcluster"] }, "HighestMedianRules": { @@ -14111,7 +14279,7 @@ "name": "HistDAWass", "version": "1.0.8", "sha256": "001ranvb4lfjh9lmh5d031g0k6r3yxzwaxvyacxh07hlf9fh7kvn", - "depends": ["class", "FactoMineR", "ggplot2", "ggridges", "histogram", "Rcpp", "RcppArmadillo"] + "depends": ["FactoMineR", "Rcpp", "RcppArmadillo", "class", "ggplot2", "ggridges", "histogram"] }, "HistDat": { "name": "HistDat", @@ -14127,39 +14295,39 @@ }, "HiveR": { "name": "HiveR", - "version": "0.3.63", - "sha256": "1vi24k23a017czfy9kihmq4s1dywzm274dyhyp1imx94afsnmhc3", - "depends": ["jpeg", "plyr", "png", "RColorBrewer", "rgl"] + "version": "0.4.0", + "sha256": "1fddyqx781vw2k9kxnsxzf5j2i9340a5ljpr1ddrcl1h88qnqpjs", + "depends": ["RColorBrewer", "jpeg", "plyr", "png", "rgl", "xtable"] }, "Hmisc": { "name": "Hmisc", "version": "5.1-3", "sha256": "1sq5qvlr9swhdvf3l420y9fxq5s1qw8aiyl9a62sb357ywppfq9w", - "depends": ["base64enc", "cluster", "colorspace", "data_table", "foreign", "Formula", "ggplot2", "gridExtra", "gtable", "htmlTable", "htmltools", "knitr", "nnet", "rmarkdown", "rpart", "viridis"] + "depends": ["Formula", "base64enc", "cluster", "colorspace", "data_table", "foreign", "ggplot2", "gridExtra", "gtable", "htmlTable", "htmltools", "knitr", "nnet", "rmarkdown", "rpart", "viridis"] }, "Hmsc": { "name": "Hmsc", "version": "3.0-13", "sha256": "13gqwjniwxc5lgsj044qjq6ic0ibwvj3mviw4hq31s89m834gvyb", - "depends": ["abind", "ape", "BayesLogit", "coda", "fields", "FNN", "ggplot2", "MASS", "Matrix", "matrixStats", "MCMCpack", "nnet", "pracma", "pROC", "rlang", "sp", "statmod", "truncnorm"] + "depends": ["BayesLogit", "FNN", "MASS", "MCMCpack", "Matrix", "abind", "ape", "coda", "fields", "ggplot2", "matrixStats", "nnet", "pROC", "pracma", "rlang", "sp", "statmod", "truncnorm"] }, "HoRM": { "name": "HoRM", "version": "0.1.3", "sha256": "09dkpzlwkkdn0z8g9fbb7hzxbrrq70x9v1zx254svck2jyk0hx58", - "depends": ["ggplot2", "MASS", "orthopolynom", "quantmod", "rsm"] + "depends": ["MASS", "ggplot2", "orthopolynom", "quantmod", "rsm"] }, "HodgesTools": { "name": "HodgesTools", "version": "1.0.0", "sha256": "02i87pd5ah3mmf03878354p8nqh3bgn9cnrl1pnnrb3qw7afj19q", - "depends": ["data_table", "dplyr", "ggplot2", "ini", "magrittr", "qqman", "RColorBrewer", "readr", "RecordLinkage"] + "depends": ["RColorBrewer", "RecordLinkage", "data_table", "dplyr", "ggplot2", "ini", "magrittr", "qqman", "readr"] }, "Holomics": { "name": "Holomics", "version": "1.1.1", "sha256": "1d2ypgsaq1y4q9q8yis2549m2vaxg4fas6x9zagsw4jx97vi61kh", - "depends": ["BiocParallel", "bs4Dash", "config", "dplyr", "DT", "ggplot2", "ggrepel", "golem", "igraph", "markdown", "matrixStats", "mixOmics", "openxlsx", "readxl", "reshape2", "RSpectra", "shiny", "shinyalert", "shinybusy", "shinyjs", "shinyvalidate", "shinyWidgets", "stringr", "tidyr", "tippy", "uuid", "visNetwork"] + "depends": ["BiocParallel", "DT", "RSpectra", "bs4Dash", "config", "dplyr", "ggplot2", "ggrepel", "golem", "igraph", "markdown", "matrixStats", "mixOmics", "openxlsx", "readxl", "reshape2", "shiny", "shinyWidgets", "shinyalert", "shinybusy", "shinyjs", "shinyvalidate", "stringr", "tidyr", "tippy", "uuid", "visNetwork"] }, "Homeric": { "name": "Homeric", @@ -14173,11 +14341,17 @@ "sha256": "0ynxn1mcr76yvqjpmi8mxl35i9r1fy7rwshpv8qx68nabk67rh61", "depends": ["HEtools", "polynom"] }, + "HonestDiD": { + "name": "HonestDiD", + "version": "0.2.6", + "sha256": "1ywq7a4lz9w2k4yzqlljrb0qa623lgn3wngx00vapdx6a14vfaam", + "depends": ["CVXR", "Matrix", "Rglpk", "TruncatedNormal", "dplyr", "foreach", "ggplot2", "latex2exp", "lpSolveAPI", "matrixStats", "mvtnorm", "pracma", "purrr", "rlang", "tibble"] + }, "HospitalNetwork": { "name": "HospitalNetwork", "version": "0.9.3", "sha256": "183nb9h9b1z1ifpnzcxa8wh3xm2id6fnq9vqd4vkbxzw7wlyd86b", - "depends": ["checkmate", "data_table", "ggplot2", "ggraph", "igraph", "lubridate", "R6"] + "depends": ["R6", "checkmate", "data_table", "ggplot2", "ggraph", "igraph", "lubridate"] }, "Hotelling": { "name": "Hotelling", @@ -14187,15 +14361,15 @@ }, "HotellingEllipse": { "name": "HotellingEllipse", - "version": "1.1.0", - "sha256": "1xvm54iqgdnqjpkmgi4ssgpdz2pap60y9z9whrv2ky3q16mjqycz", - "depends": ["dplyr", "FactoMineR", "ggforce", "ggplot2", "lifecycle", "magrittr", "purrr", "tibble"] + "version": "1.2.0", + "sha256": "1d7af7wdjkp2r5x49p76si5jwj7jxd5mngkip7x91rbjj0v0wagp", + "depends": ["FactoMineR", "dplyr", "ggforce", "ggplot2", "lifecycle", "magrittr", "purrr", "rgl", "tibble"] }, "HuraultMisc": { "name": "HuraultMisc", "version": "1.1.1", "sha256": "0bi1y7icrg0f4n9ah9dsrijnfr39bqg3799rz4hccd1b061f0rvj", - "depends": ["cowplot", "dplyr", "ggplot2", "HDInterval", "Hmisc", "magrittr", "reshape2", "rstan", "tidyr"] + "depends": ["HDInterval", "Hmisc", "cowplot", "dplyr", "ggplot2", "magrittr", "reshape2", "rstan", "tidyr"] }, "HurreconR": { "name": "HurreconR", @@ -14207,13 +14381,13 @@ "name": "HyMETT", "version": "1.1.2", "sha256": "0f1gismhkwi8ynnxlbsvpal15ab2d2j4arrvah25bchybwffhqqg", - "depends": ["checkmate", "dplyr", "EnvStats", "lmomco", "lubridate", "plyr", "rlang", "tibble", "zoo"] + "depends": ["EnvStats", "checkmate", "dplyr", "lmomco", "lubridate", "plyr", "rlang", "tibble", "zoo"] }, "HyRiM": { "name": "HyRiM", "version": "2.0.2", "sha256": "02hb8kl02872xvyhg0k19xavcmhqmf0ddfnxx5nxlpzgzb432csd", - "depends": ["compare", "grImport2", "polynom", "purrr", "Rglpk"] + "depends": ["Rglpk", "compare", "grImport2", "polynom", "purrr"] }, "HybridDesign": { "name": "HybridDesign", @@ -14225,7 +14399,7 @@ "name": "HybridMicrobiomes", "version": "0.1.1", "sha256": "05y3hcw18q9v3fpv0i0msmr9v4hnfgk0ni55wk3k786h96m2swsv", - "depends": ["ape", "compositions", "geometry", "ks", "PERMANOVA", "phyloseq", "rgl", "rlang", "StereoMorph", "vegan"] + "depends": ["PERMANOVA", "StereoMorph", "ape", "compositions", "geometry", "ks", "phyloseq", "rgl", "rlang", "vegan"] }, "HydroCode": { "name": "HydroCode", @@ -14249,7 +14423,7 @@ "name": "HyperG", "version": "1.0.0", "sha256": "0w84ph0vd03i22s8g52jf2w96yd80ynbh6x0p88apg92jdsapcrc", - "depends": ["gtools", "igraph", "Matrix", "mclust", "proxy", "RSpectra"] + "depends": ["Matrix", "RSpectra", "gtools", "igraph", "mclust", "proxy"] }, "HyperbolicDist": { "name": "HyperbolicDist", @@ -14257,23 +14431,29 @@ "sha256": "10bcqychdc3rrdyqng5sxjbr8a6wljwnqa4gff99dmx8774sdw16", "depends": [] }, + "HypergeoMat": { + "name": "HypergeoMat", + "version": "4.0.3", + "sha256": "0yc9kvi8y5ikf9db5r1wx3a00ykhv4ngl1jq0q1bzn4zl5y5y7pf", + "depends": ["EigenR", "JuliaConnectoR", "Rcpp", "RcppEigen", "gsl"] + }, "IADT": { "name": "IADT", "version": "1.2.1", "sha256": "053ymsn7ibjkzdz1znlfz1y6j78bl2fv81dbiihksw09wzx2aa3c", - "depends": ["mgcv", "mvnfast", "Rdpack", "Rmpfr"] + "depends": ["Rdpack", "Rmpfr", "mgcv", "mvnfast"] }, "IALS": { "name": "IALS", "version": "0.1.3", "sha256": "1gmsn428r923clq4zphl24wxbrhrn2mpbdkw38kaklxhwwf8lzki", - "depends": ["HDMFA", "pracma", "RSpectra"] + "depends": ["HDMFA", "RSpectra", "pracma"] }, "IAPWS95": { "name": "IAPWS95", "version": "1.2.4", "sha256": "0jccq1pj0b8xpa7zs20ikkwlyj0f2q5qzdz8kllm0qiwlrrj7jsn", - "depends": ["ggplot2", "pander", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "pander"] }, "IASD": { "name": "IASD", @@ -14309,7 +14489,7 @@ "name": "IAcsSPCR", "version": "1.2.1", "sha256": "0x0h1vicw0jlm9p10cw7g75g2x0d73rjpdwh1j7lxq6cnbpkbxf9", - "depends": ["abind", "FrF2", "lattice", "stringi"] + "depends": ["FrF2", "abind", "lattice", "stringi"] }, "IBCF_MTME": { "name": "IBCF.MTME", @@ -14333,7 +14513,7 @@ "name": "IBMPopSim", "version": "1.0.0", "sha256": "0dxw3ibvfnqva3f0nk5w9q8y2sx0hla619f6yq6b31apxnbxp72p", - "depends": ["checkmate", "dplyr", "ggplot2", "Rcpp", "readr", "rlang"] + "depends": ["Rcpp", "checkmate", "dplyr", "ggplot2", "readr", "rlang"] }, "IBRtools": { "name": "IBRtools", @@ -14351,19 +14531,19 @@ "name": "ICAMS", "version": "2.3.12", "sha256": "0nnmnbh02d5miyk6fr07jrrnv3h7ws72xkwr92apvcx9m5ql6ll0", - "depends": ["Biostrings", "BSgenome", "data_table", "dplyr", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "stringi", "zip"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "RColorBrewer", "data_table", "dplyr", "stringi", "zip"] }, "ICAOD": { "name": "ICAOD", "version": "1.0.1", "sha256": "07fxh60vsndlvjijjsh1a9l2qkp78sb9nkg5x5mslh209lpjjhw1", - "depends": ["cubature", "mnormt", "mvQuad", "nloptr", "Rcpp", "RcppEigen", "sn"] + "depends": ["Rcpp", "RcppEigen", "cubature", "mnormt", "mvQuad", "nloptr", "sn"] }, "ICBioMark": { "name": "ICBioMark", "version": "0.1.4", "sha256": "1bvlbczlkjdql98ds5wgmg3j2dxbfm5i4yzq98pdkzaiccg8sx2v", - "depends": ["dplyr", "gglasso", "ggplot2", "glmnet", "latex2exp", "Matrix", "matrixStats", "PRROC", "purrr"] + "depends": ["Matrix", "PRROC", "dplyr", "gglasso", "ggplot2", "glmnet", "latex2exp", "matrixStats", "purrr"] }, "ICC": { "name": "ICC", @@ -14391,15 +14571,15 @@ }, "ICDS": { "name": "ICDS", - "version": "0.1.2", - "sha256": "1bnj2ngh2n2yhgx8z9kawnpgkfgqw3b8xw9wkhimws4f2ir4k1zl", + "version": "0.1.3", + "sha256": "12zg6bixwqn6m25pnmyqh7fpy5rlkp5warfw5nlmmay0hjydm03q", "depends": ["graphite", "igraph", "metap", "org_Hs_eg_db"] }, "ICED": { "name": "ICED", "version": "0.0.1", "sha256": "0l23xvkkzak1s87bzc4fhy2cy0mvzqv8hs9qc8lk2nminnfxg03p", - "depends": ["boot", "knitr", "lavaan", "MASS", "stringr"] + "depends": ["MASS", "boot", "knitr", "lavaan", "stringr"] }, "ICEbox": { "name": "ICEbox", @@ -14417,7 +14597,7 @@ "name": "ICGE", "version": "0.4.2", "sha256": "13p9v0g5qda8bpj3sj9p277l7idv4jscrsszg2kn080dapp3cppp", - "depends": ["cluster", "fastcluster", "MASS"] + "depends": ["MASS", "cluster", "fastcluster"] }, "ICGOR": { "name": "ICGOR", @@ -14435,7 +14615,7 @@ "name": "ICRanks", "version": "3.1", "sha256": "1vwzqkjg7i5hm96s8frp72n6xqadlsawzr1wby1fhsxl2m5f1797", - "depends": ["gmp", "multcomp", "Rcpp"] + "depends": ["Rcpp", "gmp", "multcomp"] }, "ICS": { "name": "ICS", @@ -14447,13 +14627,13 @@ "name": "ICSClust", "version": "0.1.0", "sha256": "0sw8ck9384xc0rfj7q7yd0fjacilp64fx8b0l0cw5k920rnzskbj", - "depends": ["cluster", "fpc", "GGally", "ggplot2", "heplots", "ICS", "mclust", "moments", "mvtnorm", "otrimle", "Rcpp", "RcppArmadillo", "RcppRoll", "rrcov", "scales", "tclust"] + "depends": ["GGally", "ICS", "Rcpp", "RcppArmadillo", "RcppRoll", "cluster", "fpc", "ggplot2", "heplots", "mclust", "moments", "mvtnorm", "otrimle", "rrcov", "scales", "tclust"] }, "ICSKAT": { "name": "ICSKAT", "version": "0.2.0", "sha256": "13cx2480kyzcwxp9b57p3rq4fs6x1fd4wpwm7iwiqjh17v4vb54l", - "depends": ["CompQuadForm", "dplyr", "magrittr", "Rcpp", "RcppEigen", "rje", "survival", "zoo"] + "depends": ["CompQuadForm", "Rcpp", "RcppEigen", "dplyr", "magrittr", "rje", "survival", "zoo"] }, "ICSNP": { "name": "ICSNP", @@ -14495,7 +14675,7 @@ "name": "ICcalib", "version": "1.0.8", "sha256": "1y2w12ka0qxh9dg6dlcrnndz1xrv8gkppan64qkyk5vjrh18ajz4", - "depends": ["fitdistrplus", "icenReg", "ICsurv", "MASS", "msm", "numDeriv", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["ICsurv", "MASS", "Rcpp", "RcppArmadillo", "fitdistrplus", "icenReg", "msm", "numDeriv", "survival"] }, "ICcforest": { "name": "ICcforest", @@ -14525,13 +14705,13 @@ "name": "ICtest", "version": "0.3-5", "sha256": "13i7zsjy4dqx48vzn9294k7xb93m6r2ab3d546rymfqdzdjszpnp", - "depends": ["GGally", "ggplot2", "ICS", "ICSNP", "JADE", "mvtnorm", "png", "Rcpp", "RcppArmadillo", "RcppRoll", "survey", "xts", "zoo"] + "depends": ["GGally", "ICS", "ICSNP", "JADE", "Rcpp", "RcppArmadillo", "RcppRoll", "ggplot2", "mvtnorm", "png", "survey", "xts", "zoo"] }, "ICvectorfields": { "name": "ICvectorfields", "version": "0.1.2", "sha256": "0h10ijh00ahk2aawg090sspdyxzln8cwzvrfqyi45p19sbx93503", - "depends": ["fftwtools", "Rcpp", "terra"] + "depends": ["Rcpp", "fftwtools", "terra"] }, "IDCard": { "name": "IDCard", @@ -14543,13 +14723,13 @@ "name": "IDE", "version": "0.3.1", "sha256": "1pbfxhcbnmn0mh7a96ff58p4dpkb0di7l0v40nqyjk4jbkpd8rfl", - "depends": ["DEoptim", "dplyr", "FRK", "ggplot2", "Matrix", "sp", "spacetime", "sparseinv", "tidyr"] + "depends": ["DEoptim", "FRK", "Matrix", "dplyr", "ggplot2", "sp", "spacetime", "sparseinv", "tidyr"] }, "IDEAFilter": { "name": "IDEAFilter", "version": "0.2.0", "sha256": "0clr5jkrmwp6nd491rm67i794kh0dcjlhf6z56a8pvjhhia29hpy", - "depends": ["crayon", "ggplot2", "pillar", "purrr", "RColorBrewer", "shiny", "shinyTime"] + "depends": ["RColorBrewer", "crayon", "ggplot2", "pillar", "purrr", "shiny", "shinyTime"] }, "IDEATools": { "name": "IDEATools", @@ -14561,7 +14741,7 @@ "name": "IDF", "version": "2.1.2", "sha256": "19mg7a83badb3wqnrmx5ric0nlfdb33wcxfmq9457s8019ghvpvv", - "depends": ["evd", "fastmatch", "ismev", "pbapply", "RcppRoll"] + "depends": ["RcppRoll", "evd", "fastmatch", "ismev", "pbapply"] }, "IDMIR": { "name": "IDMIR", @@ -14573,7 +14753,7 @@ "name": "IDPSurvival", "version": "1.2", "sha256": "0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw", - "depends": ["gtools", "Rsolnp", "survival"] + "depends": ["Rsolnp", "gtools", "survival"] }, "IDPmisc": { "name": "IDPmisc", @@ -14635,6 +14815,12 @@ "sha256": "0zdz5s2fa7bgqmscxlf9ppvkpnxidy9fhkxn3qf94bc7y4h5xzh7", "depends": ["IDSL_IPA", "IDSL_UFA", "RcppAlgos", "readxl"] }, + "IDSpatialStats": { + "name": "IDSpatialStats", + "version": "0.4.0", + "sha256": "0skvyh6p31afdqsvqn6k9k18js4zx8dh95v3zswln1ym46v8rs8f", + "depends": ["doParallel", "foreach", "igraph", "spatstat_explore", "spatstat_geom"] + }, "IDetect": { "name": "IDetect", "version": "0.1.0", @@ -14645,7 +14831,7 @@ "name": "IDmeasurer", "version": "1.0.0", "sha256": "0n7rziaaxm9dqixmw6rxgq9dwnwdl3dsdnpd9s59k5skdlaxnl5m", - "depends": ["infotheo", "lme4", "MASS"] + "depends": ["MASS", "infotheo", "lme4"] }, "IDmining": { "name": "IDmining", @@ -14657,13 +14843,13 @@ "name": "IETD", "version": "1.0.0", "sha256": "0avhyw0zcb8vj0nqfy41yq5kcd8yf9rmaawdvfcy5rqwxmi1mw9l", - "depends": ["doParallel", "dplyr", "foreach", "ggplot2", "lubridate", "Rdpack"] + "depends": ["Rdpack", "doParallel", "dplyr", "foreach", "ggplot2", "lubridate"] }, "IFC": { "name": "IFC", "version": "0.2.1", "sha256": "0b0kda1wh9li6x2avjw3ayj882r69v06sjmwc31dkf59b8r67l9k", - "depends": ["DT", "gridExtra", "gridGraphics", "KernSmooth", "lattice", "latticeExtra", "Rcpp", "visNetwork", "xml2"] + "depends": ["DT", "KernSmooth", "Rcpp", "gridExtra", "gridGraphics", "lattice", "latticeExtra", "visNetwork", "xml2"] }, "IFMCDM": { "name": "IFMCDM", @@ -14693,13 +14879,13 @@ "name": "IGoRRR", "version": "0.3.4", "sha256": "1p3dakv9xv835pkixa4smp3bhnrydrfskh8b92kkp8vb8sahjyzd", - "depends": ["arrow", "clipr", "dplyr", "feather", "fst", "fuzzyjoin", "ggformula", "glue", "haven", "Hmisc", "htmltools", "jsonlite", "lubridate", "magrittr", "mapsf", "purrr", "readODS", "readxl", "rhandsontable", "rio", "shiny", "shinydashboard", "shinyFiles", "shinyWidgets", "skimr", "sortable", "stringr", "tables", "tibble", "tidyr", "zoo"] + "depends": ["Hmisc", "arrow", "clipr", "dplyr", "feather", "fst", "fuzzyjoin", "ggformula", "glue", "haven", "htmltools", "jsonlite", "lubridate", "magrittr", "mapsf", "purrr", "readODS", "readxl", "rhandsontable", "rio", "shiny", "shinyFiles", "shinyWidgets", "shinydashboard", "skimr", "sortable", "stringr", "tables", "tibble", "tidyr", "zoo"] }, "IHSEP": { "name": "IHSEP", "version": "0.3.1", "sha256": "18zkqg9vinc8a37i86k516jyjrn3gqbyzb86lq9dix4kskvlvpfd", - "depends": ["lpint", "Rcpp"] + "depends": ["Rcpp", "lpint"] }, "IIProductionUnknown": { "name": "IIProductionUnknown", @@ -14711,25 +14897,25 @@ "name": "IIVpredictor", "version": "0.1.0", "sha256": "15361j8b60jj3bh8cjxs39d9bir1aywy9bd254s5w94cakhy0ld5", - "depends": ["lavaan", "R2jags"] + "depends": ["R2jags", "lavaan"] }, "ILS": { "name": "ILS", "version": "0.3", "sha256": "0l4rrl1j72lqg87nzw4xap054gl2h3m90g8sl5bzg3jc7c290rd7", - "depends": ["depthTools", "fda_usc", "lattice", "MASS", "multcomp"] + "depends": ["MASS", "depthTools", "fda_usc", "lattice", "multcomp"] }, "ILSE": { "name": "ILSE", "version": "1.1.7", "sha256": "0jx0f7lk18k0wsypi4ynq1zqbb9hsmcmf0chxyrpqkadfqb6mgwr", - "depends": ["pbapply", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "pbapply"] }, "ILSM": { "name": "ILSM", - "version": "1.0.2", - "sha256": "079szirz5a1rcza756bjjdlz0wwdg8jifnz5kiw1wlkmc3x2m7sz", - "depends": ["igraph", "Matrix"] + "version": "1.0.3.1", + "sha256": "0x9khrli414qg4i5kqcspz44w9vjcl13qadgf90rgmkcwqqmw3dn", + "depends": ["Matrix", "igraph"] }, "IMD": { "name": "IMD", @@ -14741,19 +14927,19 @@ "name": "IMEC", "version": "0.2.0", "sha256": "1k85pr6s6lysn53n59i8rcdhyg7r3il5avbckvvz43p6lh0fgxpy", - "depends": ["igraph", "IsingSampler", "qgraph"] + "depends": ["IsingSampler", "igraph", "qgraph"] }, "IMIFA": { "name": "IMIFA", "version": "2.2.0", "sha256": "08h53w1axvmvnd4z1nf5bsps5sr6g8a77q6pvg39ss7jcfqm800v", - "depends": ["matrixStats", "mclust", "mvnfast", "Rfast", "slam", "viridisLite"] + "depends": ["Rfast", "matrixStats", "mclust", "mvnfast", "slam", "viridisLite"] }, "IMIX": { "name": "IMIX", "version": "1.1.5", "sha256": "0j5wh4j039xmwxb75msgfvh4f7p5xafvn2z47vyn12hd4dznwndq", - "depends": ["crayon", "ggplot2", "MASS", "mclust", "mixtools", "mvtnorm"] + "depends": ["MASS", "crayon", "ggplot2", "mclust", "mixtools", "mvtnorm"] }, "IMP": { "name": "IMP", @@ -14771,7 +14957,7 @@ "name": "IMTest", "version": "1.0.0", "sha256": "0n0swbi051cr7mrjmszqg79hxa38ccyq69ws8c37ixwb0lpxmx48", - "depends": ["lme4", "ltm", "MASS", "reshape2"] + "depends": ["MASS", "lme4", "ltm", "reshape2"] }, "IMak": { "name": "IMak", @@ -14789,7 +14975,7 @@ "name": "INCATome", "version": "1.0", "sha256": "1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs", - "depends": ["genefilter", "limma", "multtest", "RankProd", "siggenes"] + "depends": ["RankProd", "genefilter", "limma", "multtest", "siggenes"] }, "INLABMA": { "name": "INLABMA", @@ -14801,13 +14987,13 @@ "name": "INLAjoint", "version": "24.3.25", "sha256": "03hd29x8arww3fkyzgj8wv1b0sm5nl994bmg6m2sb4xg00slhp05", - "depends": ["ggplot2", "lme4", "Matrix", "mvtnorm", "nlme", "numDeriv"] + "depends": ["Matrix", "ggplot2", "lme4", "mvtnorm", "nlme", "numDeriv"] }, "INLAspacetime": { "name": "INLAspacetime", "version": "0.1.8", "sha256": "0yyhcizaj90qqvirrk74whynxf7zvv09w79k4j61i4n84hm0njdm", - "depends": ["fmesher", "Matrix", "sf", "sp", "terra"] + "depends": ["Matrix", "fmesher", "sf", "sp", "terra"] }, "INQC": { "name": "INQC", @@ -14819,7 +15005,7 @@ "name": "INSPECTumours", "version": "0.1.0", "sha256": "1jh6p3bgnrjixqzvjl0z3nv6lh01fx3x925h3na2pi3scqx5gx0s", - "depends": ["brms", "dplyr", "DT", "ggeffects", "ggplot2", "knitr", "lme4", "modelr", "pander", "plotly", "purrr", "readxl", "rlang", "rmarkdown", "shiny", "shinyalert", "shinyFeedback", "shinyjs", "shinytoastr", "shinyvalidate", "tidybayes", "tidyr", "tippy", "vroom", "waiter"] + "depends": ["DT", "brms", "dplyr", "ggeffects", "ggplot2", "knitr", "lme4", "modelr", "pander", "plotly", "purrr", "readxl", "rlang", "rmarkdown", "shiny", "shinyFeedback", "shinyalert", "shinyjs", "shinytoastr", "shinyvalidate", "tidybayes", "tidyr", "tippy", "vroom", "waiter"] }, "INSPIRE": { "name": "INSPIRE", @@ -14831,19 +15017,19 @@ "name": "INTRIGUE", "version": "0.1.0", "sha256": "1l1vfl0m4iqniwp4bp1bfjpqhwahg341fpyxhryr0j8lypqaw7si", - "depends": ["dplyr", "rlist", "SQUAREM"] + "depends": ["SQUAREM", "dplyr", "rlist"] }, "IOHanalyzer": { "name": "IOHanalyzer", "version": "0.1.8.10", "sha256": "1a92lzq2m9yrgaajlybpib6awnf2p7qzbfanlzg86x9z4hcdiyzr", - "depends": ["colorspace", "data_table", "dplyr", "eaf", "ggplot2", "httr", "knitr", "magrittr", "plotly", "RColorBrewer", "Rcpp", "reshape2", "rjson", "shiny", "stringi", "viridis"] + "depends": ["RColorBrewer", "Rcpp", "colorspace", "data_table", "dplyr", "eaf", "ggplot2", "httr", "knitr", "magrittr", "plotly", "reshape2", "rjson", "shiny", "stringi", "viridis"] }, "IOHexperimenter": { "name": "IOHexperimenter", "version": "0.1.4", "sha256": "0aacliznncl488rjsnx02pfj1mchhcyb36v816g959ll38pvc6bk", - "depends": ["assertthat", "BH", "magrittr", "Rcpp"] + "depends": ["BH", "Rcpp", "assertthat", "magrittr"] }, "IOLS": { "name": "IOLS", @@ -14861,7 +15047,7 @@ "name": "IPCAPS", "version": "1.1.8", "sha256": "17ifkgjjnvvcc8dp065ng4ad9lr85lcdcb401vi84yy8m2llbypw", - "depends": ["apcluster", "expm", "fpc", "KRIS", "LPCM", "MASS", "Matrix", "Rmixmod"] + "depends": ["KRIS", "LPCM", "MASS", "Matrix", "Rmixmod", "apcluster", "expm", "fpc"] }, "IPCWK": { "name": "IPCWK", @@ -14901,8 +15087,8 @@ }, "IPLGP": { "name": "IPLGP", - "version": "2.0.4", - "sha256": "0sv4zl6kn72ajnp32k9xg011y0bjxsq3a0vcj3s0w4wwkcr1h2w5", + "version": "2.0.5", + "sha256": "1c8xqdgs5jq01fnppy2r4wx8y6avzmqaq1id5jxq1ds96dpr72cf", "depends": ["ggplot2", "sommer"] }, "IPMbook": { @@ -14921,7 +15107,7 @@ "name": "IPV", "version": "1.0.0", "sha256": "0h1x2scmwgzl7i0kk4pf7kfq55yiqn065s5r944rrfk09y9g2vgy", - "depends": ["ggforce", "ggplot2", "lavaan", "Matrix", "reshape2", "stringr"] + "depends": ["Matrix", "ggforce", "ggplot2", "lavaan", "reshape2", "stringr"] }, "IPWboxplot": { "name": "IPWboxplot", @@ -14939,19 +15125,19 @@ "name": "IRCcheck", "version": "1.0.0", "sha256": "035sx36qf5hdnc51h8251qwxfm30r8h2v2qs2x161ip4cqghw019", - "depends": ["corpcor", "GGMncv", "glmnet", "MASS", "Rdpack"] + "depends": ["GGMncv", "MASS", "Rdpack", "corpcor", "glmnet"] }, "IRISMustangMetrics": { "name": "IRISMustangMetrics", "version": "2.4.6", "sha256": "08p1xg4mqi36647nzmlmmmvdgzc9xgz4sf4lh2lrlma99f7y8kzd", - "depends": ["dplyr", "IRISSeismic", "pracma", "RCurl", "seismicRoll", "signal", "stringr", "XML"] + "depends": ["IRISSeismic", "RCurl", "XML", "dplyr", "pracma", "seismicRoll", "signal", "stringr"] }, "IRISSeismic": { "name": "IRISSeismic", "version": "1.6.6", "sha256": "0da4bh5kvlp3dchsz0dyddwpwdvss7aij2xsi2kkppi3hrfwja7j", - "depends": ["pracma", "RCurl", "seismicRoll", "signal", "stringr", "XML"] + "depends": ["RCurl", "XML", "pracma", "seismicRoll", "signal", "stringr"] }, "IRR2FPR": { "name": "IRR2FPR", @@ -14969,7 +15155,7 @@ "name": "IRTShiny", "version": "1.2", "sha256": "094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v", - "depends": ["beeswarm", "CTT", "ltm", "psych", "shiny", "shinyAce"] + "depends": ["CTT", "beeswarm", "ltm", "psych", "shiny", "shinyAce"] }, "IRTest": { "name": "IRTest", @@ -14987,19 +15173,19 @@ "name": "IRexamples", "version": "0.0.4", "sha256": "0x44gq6ik73r8zy5cjsdjr3k9xdf47lyrwldbgnfllja7kzxclfm", - "depends": ["DisImpact", "dplyr", "forcats", "geodist", "ggplot2", "ggthemes", "maps", "RSelenium", "rstanarm", "rvest", "sf", "survey", "tidycensus", "tidygeocoder", "tigris", "twang"] + "depends": ["DisImpact", "RSelenium", "dplyr", "forcats", "geodist", "ggplot2", "ggthemes", "maps", "rstanarm", "rvest", "sf", "survey", "tidycensus", "tidygeocoder", "tigris", "twang"] }, "IRkernel": { "name": "IRkernel", "version": "1.3.2", "sha256": "19i4wj5cb62n6j83nxgv500dcdzrf6rzwdy5v6fh7r93vjyxiip1", - "depends": ["crayon", "digest", "evaluate", "IRdisplay", "jsonlite", "pbdZMQ", "repr", "uuid"] + "depends": ["IRdisplay", "crayon", "digest", "evaluate", "jsonlite", "pbdZMQ", "repr", "uuid"] }, "IRon": { "name": "IRon", "version": "0.1.4", "sha256": "1yl9i6gxzwy5f4qva3a14flzlk1xk7v2m02n0mg8ddchc5n6j3bc", - "depends": ["ggplot2", "ggpubr", "gridExtra", "Rcpp", "robustbase", "scam"] + "depends": ["Rcpp", "ggplot2", "ggpubr", "gridExtra", "robustbase", "scam"] }, "ISAR": { "name": "ISAR", @@ -15059,7 +15245,7 @@ "name": "ISOpureR", "version": "1.1.3", "sha256": "1ydhsh3v6n7prrg0dm7hsg8wx1244g791xnz1sjyhljhm31hgwc0", - "depends": ["futile_logger", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "futile_logger"] }, "ISOweek": { "name": "ISOweek", @@ -15077,7 +15263,7 @@ "name": "ISRaD", "version": "2.5.5", "sha256": "02h64lqqkc7a9n4f0hkz29bvyzjzwc024qr22iqg4m429i41kc3r", - "depends": ["dplyr", "ggplot2", "httr", "maps", "RCurl", "readxl", "rio", "rnaturalearth", "sf", "terra", "tidyr", "writexl"] + "depends": ["RCurl", "dplyr", "ggplot2", "httr", "maps", "readxl", "rio", "rnaturalearth", "sf", "terra", "tidyr", "writexl"] }, "ISS": { "name": "ISS", @@ -15095,7 +15281,7 @@ "name": "ITNr", "version": "0.7.0", "sha256": "0zpyrg4vcn17k75x1i1dp2hw8n2fp34qf4skywx3wrchjpxmsra8", - "depends": ["blockmodeling", "circlize", "cowplot", "dplyr", "fastmatch", "GGally", "ggplot2", "igraph", "intergraph", "maps", "network", "networkDynamic", "plyr", "RColorBrewer", "reshape2", "sna", "tnet", "WDI", "xergm_common"] + "depends": ["GGally", "RColorBrewer", "WDI", "blockmodeling", "circlize", "cowplot", "dplyr", "fastmatch", "ggplot2", "igraph", "intergraph", "maps", "network", "networkDynamic", "plyr", "reshape2", "sna", "tnet", "xergm_common"] }, "IVYplot": { "name": "IVYplot", @@ -15105,9 +15291,9 @@ }, "IceSat2R": { "name": "IceSat2R", - "version": "1.0.4", - "sha256": "1jwy1fwnc2rq3c643maa2h7hrwzq0sm6iv35kil95n3pw7pkgdy3", - "depends": ["data_table", "doParallel", "foreach", "glue", "httr", "leafgl", "leaflet", "leaflet_extras", "leafsync", "lubridate", "lwgeom", "magrittr", "miniUI", "rnaturalearth", "rvest", "sf", "shiny", "units"] + "version": "1.0.6", + "sha256": "1l4lafbnlll3x9dyzb1mz4dw7dk2bdc22wq1vydwg22gd113wxxl", + "depends": ["data_table", "doParallel", "foreach", "glue", "httr", "leafgl", "leaflet", "leaflet_extras", "leafsync", "lubridate", "lwgeom", "magrittr", "miniUI", "rnaturalearth", "rvest", "sf", "shiny", "units", "withr"] }, "IgAScores": { "name": "IgAScores", @@ -15125,7 +15311,7 @@ "name": "ImFoR", "version": "0.1.0", "sha256": "10wm0wkcz85g94m4824fm6xy1mqk9syqr3rj5fx6bbs2mkh4wxca", - "depends": ["caret", "ggplot2", "ggpubr", "Metrics", "minpack_lm", "nlme", "tidyverse"] + "depends": ["Metrics", "caret", "ggplot2", "ggpubr", "minpack_lm", "nlme", "tidyverse"] }, "ImHD": { "name": "ImHD", @@ -15143,7 +15329,7 @@ "name": "ImNN", "version": "0.1.0", "sha256": "1xs5pfq4wfd26d8vdhl0zjynrjkzjmnyqx3gprn7dxk1i41r3bg1", - "depends": ["ggplot2", "MLmetrics", "neuralnet"] + "depends": ["MLmetrics", "ggplot2", "neuralnet"] }, "ImVol": { "name": "ImVol", @@ -15155,7 +15341,13 @@ "name": "Immigrate", "version": "0.2.1", "sha256": "0pnnvv63kkg7pgyblb1vlx54c6169n40fn58aypdy5xcnknabvxn", - "depends": ["pROC", "Rcpp"] + "depends": ["Rcpp", "pROC"] + }, + "Imneuron": { + "name": "Imneuron", + "version": "0.1.0", + "sha256": "0d6d7v4n38hkclrwqavbnwr75phw4h07jk5a8qs0kham6nhcifm9", + "depends": ["MLmetrics", "ggplot2", "neuralnet"] }, "ImpShrinkage": { "name": "ImpShrinkage", @@ -15167,13 +15359,13 @@ "name": "ImpactEffectsize", "version": "0.7", "sha256": "1g62p81x6i9gs562m3pdixw27d2cbzhz8drmcfslgs6f48zlir0j", - "depends": ["caTools", "matrixStats", "parallelDist", "Rcpp"] + "depends": ["Rcpp", "caTools", "matrixStats", "parallelDist"] }, "ImportExport": { "name": "ImportExport", "version": "1.3", "sha256": "07i7p9xha1f23r07lw87ak13hd4wavdvwh8vb8sg2gyvnpa5njwp", - "depends": ["chron", "gdata", "haven", "Hmisc", "readxl", "RODBC", "writexl"] + "depends": ["Hmisc", "RODBC", "chron", "gdata", "haven", "readxl", "writexl"] }, "ImportanceIndice": { "name": "ImportanceIndice", @@ -15209,19 +15401,19 @@ "name": "InSilicoVA", "version": "1.4.0", "sha256": "15x6d928rk9in2swbaal6hcw2nikj153fgqyd7nhdkcbs1agrsl1", - "depends": ["coda", "ggplot2", "InterVA5", "rJava"] + "depends": ["InterVA5", "coda", "ggplot2", "rJava"] }, "IncDTW": { "name": "IncDTW", "version": "1.1.4.4", "sha256": "0q8ssv86gbp3v6gznzm5vkc8qhny6ycbh85jg5z4izldpx8a4fq6", - "depends": ["data_table", "ggplot2", "Rcpp", "RcppArmadillo", "RcppParallel", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "data_table", "ggplot2", "scales"] }, "IncidencePrevalence": { "name": "IncidencePrevalence", - "version": "0.7.3", - "sha256": "0cw2075z492sav1nqlvq8s6xm6835s07g1zkwjmg81mb95a060f0", - "depends": ["CDMConnector", "checkmate", "cli", "clock", "DBI", "dbplyr", "dplyr", "ggplot2", "glue", "lifecycle", "lubridate", "magrittr", "omopgenerics", "PatientProfiles", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr", "tidyselect", "zip"] + "version": "0.7.4", + "sha256": "172difb7qikd8390zyn5cgl6m598wyn1bh8wpra9gih3f3kg40j7", + "depends": ["CDMConnector", "PatientProfiles", "checkmate", "cli", "clock", "dbplyr", "dplyr", "glue", "lifecycle", "lubridate", "magrittr", "omopgenerics", "purrr", "rlang", "stringr", "tidyr", "visOmopResults"] }, "IncomPair": { "name": "IncomPair", @@ -15245,13 +15437,13 @@ "name": "IndepTest", "version": "0.2.0", "sha256": "017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p", - "depends": ["FNN", "mvtnorm", "Rdpack"] + "depends": ["FNN", "Rdpack", "mvtnorm"] }, "IndexConstruction": { "name": "IndexConstruction", "version": "0.1-3", "sha256": "08bi3x7a9plxshgj6hq58mzkf1117a7p0fd1akqjh7k8mgywifwf", - "depends": ["fGarch", "KernSmooth", "lubridate", "RcppBDT", "xts", "zoo"] + "depends": ["KernSmooth", "RcppBDT", "fGarch", "lubridate", "xts", "zoo"] }, "IndexNumR": { "name": "IndexNumR", @@ -15299,7 +15491,7 @@ "name": "InflectSSP", "version": "1.6", "sha256": "14i53bsy693yh28y1akg4xd6srz077v9a8i7hx07qf73w2m84v1z", - "depends": ["data_table", "GGally", "ggplot2", "httr", "jsonlite", "network", "plotrix", "RColorBrewer", "readxl", "svglite", "tidyr", "xlsx"] + "depends": ["GGally", "RColorBrewer", "data_table", "ggplot2", "httr", "jsonlite", "network", "plotrix", "readxl", "svglite", "tidyr", "xlsx"] }, "InfoTrad": { "name": "InfoTrad", @@ -15359,13 +15551,13 @@ "name": "IntNMF", "version": "1.2.0", "sha256": "09qzyvv7d4wr68qrlhcd4ivr65is3mypv1vaxpswwcjmcmyr4gzp", - "depends": ["cluster", "InterSIM", "MASS", "mclust", "NMF"] + "depends": ["InterSIM", "MASS", "NMF", "cluster", "mclust"] }, "InteRD": { "name": "InteRD", "version": "0.1.1", "sha256": "18grg2pyn0p3dwqhm2251d47sd97wcjr858y64lf5chkhvcz09nk", - "depends": ["Biobase", "cowplot", "DescTools", "ggplot2", "limSolve", "mgcv", "pheatmap", "Rcpp", "reshape2"] + "depends": ["Biobase", "DescTools", "Rcpp", "cowplot", "ggplot2", "limSolve", "mgcv", "pheatmap", "reshape2"] }, "IntegrateBs": { "name": "IntegrateBs", @@ -15383,13 +15575,13 @@ "name": "IntegratedMRF", "version": "1.1.9", "sha256": "0kklgc48cib4bjfs9qbw13nkp8xyjdazrg6z15x69jylnxyakic7", - "depends": ["bootstrap", "ggplot2", "limSolve", "MultivariateRandomForest", "Rcpp"] + "depends": ["MultivariateRandomForest", "Rcpp", "bootstrap", "ggplot2", "limSolve"] }, "InterNL": { "name": "InterNL", "version": "0.1.0", "sha256": "0qc6s21pjbw40jdavs5cap5m3kcjs2blyr9s80vf499j7cikkzqc", - "depends": ["forecast", "MLmetrics"] + "depends": ["MLmetrics", "forecast"] }, "InterSIM": { "name": "InterSIM", @@ -15411,9 +15603,9 @@ }, "InteractionPoweR": { "name": "InteractionPoweR", - "version": "0.2.1", - "sha256": "1mff2kasdrkk56xqvw66m8sn6186dk0nbv8bx0izpr5qf9dz308q", - "depends": ["chngpt", "doParallel", "dplyr", "foreach", "ggbeeswarm", "ggplot2", "MASS", "Matrix", "polynom", "rlang", "tidyr"] + "version": "0.2.2", + "sha256": "12bnmsx9xf5124vfnbpmfwsswaifaywbg26prsmmsmkjiarplfvl", + "depends": ["Matrix", "chngpt", "doParallel", "dplyr", "foreach", "ggbeeswarm", "ggplot2", "polynom", "rlang", "tidyr"] }, "Interatrix": { "name": "Interatrix", @@ -15467,13 +15659,13 @@ "name": "Inventorymodel", "version": "1.1.0.1", "sha256": "0x36pkr2f038cwdfqi03pljhg6xwhp7v97ymyqddb5lw5a0isw87", - "depends": ["e1071", "GameTheoryAllocation"] + "depends": ["GameTheoryAllocation", "e1071"] }, "Irescale": { "name": "Irescale", "version": "2.3.0", "sha256": "037bzli0zwlfbf5xmllqg2pi0shs33ggrnw69kzyw2sf780y3hs2", - "depends": ["e1071", "fBasics", "ggplot2", "imager", "Rdpack", "reshape2", "sp"] + "depends": ["Rdpack", "e1071", "fBasics", "ggplot2", "imager", "reshape2", "sp"] }, "IrishDirectorates": { "name": "IrishDirectorates", @@ -15497,13 +15689,13 @@ "name": "IsingFit", "version": "0.4", "sha256": "1pxpa3ji447csg1dp17x1y1071djjydl21c3zz2d3j3g6s6nmaqq", - "depends": ["glmnet", "Matrix", "qgraph"] + "depends": ["Matrix", "glmnet", "qgraph"] }, "IsingSampler": { "name": "IsingSampler", "version": "0.2.3", "sha256": "195xl9ivdhpqbl291x3cji343lgg8wsy20yz71iv7cg6g5ni8vvx", - "depends": ["dplyr", "magrittr", "nnet", "plyr", "Rcpp"] + "depends": ["Rcpp", "dplyr", "magrittr", "nnet", "plyr"] }, "Isinglandr": { "name": "Isinglandr", @@ -15527,7 +15719,7 @@ "name": "IsoCor", "version": "0.1.40", "sha256": "191y51mg6kii4x99c7437888kkacml0ch53qh1gbwv10gl2c4w8z", - "depends": ["bsplus", "DT", "golem", "htmltools", "MALDIquant", "markdown", "plyr", "rmarkdown", "shiny", "shinyalert", "shinyjs"] + "depends": ["DT", "MALDIquant", "bsplus", "golem", "htmltools", "markdown", "plyr", "rmarkdown", "shiny", "shinyalert", "shinyjs"] }, "IsoMemo": { "name": "IsoMemo", @@ -15617,7 +15809,7 @@ "name": "JFM", "version": "1.0", "sha256": "08655vgfb2ll8hwjsj5lsw4849rahn3blisdqn8bwfhclrwd24xn", - "depends": ["MASS", "randomcoloR", "Rcpp", "RcppArmadillo", "rgl", "RockFab", "Rvcg"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RockFab", "Rvcg", "randomcoloR", "rgl"] }, "JGL": { "name": "JGL", @@ -15653,7 +15845,7 @@ "name": "JMH", "version": "1.0.3", "sha256": "1n41vhr07ylqb393bsw8lrv1h77a10qshwfxrkyx2y1hsq1bh3iy", - "depends": ["caret", "dplyr", "MASS", "nlme", "Rcpp", "RcppEigen", "statmod", "survival", "timeROC"] + "depends": ["MASS", "Rcpp", "RcppEigen", "caret", "dplyr", "nlme", "statmod", "survival", "timeROC"] }, "JMI": { "name": "JMI", @@ -15665,13 +15857,13 @@ "name": "JMbayes", "version": "0.8-85", "sha256": "0s11jpzflc2zg60g4ffcw23c2f4zz3mzddrc2cl5y43xl2v304lb", - "depends": ["doParallel", "foreach", "Hmisc", "jagsUI", "MASS", "nlme", "Rcpp", "RcppArmadillo", "rstan", "shiny", "survival", "xtable"] + "depends": ["Hmisc", "MASS", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "jagsUI", "nlme", "rstan", "shiny", "survival", "xtable"] }, "JMbayes2": { "name": "JMbayes2", "version": "0.5-0", "sha256": "13p848ix1581p9yd6dgkifqj7bha8w2m7drkcz718bwmjlm83z61", - "depends": ["coda", "ggplot2", "GLMMadaptive", "gridExtra", "matrixStats", "nlme", "parallelly", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["GLMMadaptive", "Rcpp", "RcppArmadillo", "coda", "ggplot2", "gridExtra", "matrixStats", "nlme", "parallelly", "survival"] }, "JMdesign": { "name": "JMdesign", @@ -15689,13 +15881,13 @@ "name": "JOPS", "version": "0.1.19", "sha256": "0qnycf7yd1sas0v6jclmc1y0jq9bslqlf66mqyirpxcs2lsk0327", - "depends": ["boot", "colorspace", "fds", "fields", "ggplot2", "MASS", "rpart", "SemiPar", "spam", "SpATS"] + "depends": ["MASS", "SemiPar", "SpATS", "boot", "colorspace", "fds", "fields", "ggplot2", "rpart", "spam"] }, "JOUSBoost": { "name": "JOUSBoost", "version": "2.1.0", "sha256": "0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7", - "depends": ["doParallel", "foreach", "Rcpp", "rpart"] + "depends": ["Rcpp", "doParallel", "foreach", "rpart"] }, "JPEN": { "name": "JPEN", @@ -15711,15 +15903,15 @@ }, "JSDNE": { "name": "JSDNE", - "version": "4.3.2", - "sha256": "1j3ish1kfhx8in37l8ljd22qmaqi6wlsjchzwhfi21rhjrynqzkz", - "depends": ["dplyr", "MASS", "molaR", "nnet", "Rvcg"] + "version": "4.3.4", + "sha256": "04vaalcwixzi1si814zmh6w9rfircj9rd5y3gx64d5l4f5illsn5", + "depends": ["MASS", "Rvcg", "dplyr", "molaR", "nnet"] }, "JSM": { "name": "JSM", "version": "1.0.1", "sha256": "0vcsay1jpjlfdwykad4hp319swr9lv1ajlcyhmiizwr1ph3f1az9", - "depends": ["nlme", "Rcpp", "RcppEigen", "statmod", "survival"] + "depends": ["Rcpp", "RcppEigen", "nlme", "statmod", "survival"] }, "JSUparameters": { "name": "JSUparameters", @@ -15731,13 +15923,13 @@ "name": "JSconsole", "version": "0.1.0", "sha256": "1jpa48xb7hh4ap25sqrl67rzqra53qhcfwpfgs6hmpjnrld8n3ha", - "depends": ["rstudioapi", "V8"] + "depends": ["V8", "rstudioapi"] }, "JSmediation": { "name": "JSmediation", "version": "0.2.2", "sha256": "0lgd00gvg4g6sbsnaaqzqa8c3wjf2h8mkijghx926p3591b19nv8", - "depends": ["broom", "data_table", "dplyr", "glue", "knitr", "magrittr", "MASS", "purrr", "rlang", "tibble", "tidyselect"] + "depends": ["MASS", "broom", "data_table", "dplyr", "glue", "knitr", "magrittr", "purrr", "rlang", "tibble", "tidyselect"] }, "JSparO": { "name": "JSparO", @@ -15755,7 +15947,7 @@ "name": "JWileymisc", "version": "1.4.1", "sha256": "0anchmlgp4nwgr59k5ryi05fcq63d5b2aqs3nmnvr3p3rma16xq7", - "depends": ["data_table", "digest", "emmeans", "extraoperators", "fst", "ggplot2", "ggpubr", "ggthemes", "lavaan", "lme4", "MASS", "mgcv", "mice", "multcompView", "psych", "quantreg", "rlang", "rms", "robustbase", "VGAM"] + "depends": ["MASS", "VGAM", "data_table", "digest", "emmeans", "extraoperators", "fst", "ggplot2", "ggpubr", "ggthemes", "lavaan", "lme4", "mgcv", "mice", "multcompView", "psych", "quantreg", "rlang", "rms", "robustbase"] }, "JacobiEigen": { "name": "JacobiEigen", @@ -15809,12 +16001,12 @@ "name": "JointAI", "version": "1.0.6", "sha256": "1vckbn4y27bdc6176nnjpwa2wm6kyzxkvndf128jw4871964szp5", - "depends": ["coda", "future", "MASS", "mathjaxr", "mcmcse", "rjags", "rlang", "survival"] + "depends": ["MASS", "coda", "future", "mathjaxr", "mcmcse", "rjags", "rlang", "survival"] }, "JointFPM": { "name": "JointFPM", - "version": "1.2.0", - "sha256": "1g6b35i4lvwizg6ji7kg9m7lmi81zz1rrd0qsvssphmbh7i5p58s", + "version": "1.2.1", + "sha256": "04wswyp9pibhkmjksn9ndzymgj1sjmdj6wscpw1wj6hwsi6vrdmw", "depends": ["cli", "data_table", "lifecycle", "matrixStats", "rlang", "rmutil", "rstpm2", "statmod", "survival"] }, "Julia": { @@ -15827,7 +16019,7 @@ "name": "JuliaCall", "version": "0.17.5", "sha256": "036rxp2lygvpxpykpxx2lqyyzidzzi95lv6g30n70hzy0agjym4j", - "depends": ["knitr", "Rcpp", "rjson"] + "depends": ["Rcpp", "knitr", "rjson"] }, "JuliaConnectoR": { "name": "JuliaConnectoR", @@ -15835,17 +16027,23 @@ "sha256": "005l0i06whz6q7vx79pr9p6xbc01h9mngdr01gkkwrz78vi9xns9", "depends": [] }, + "JuliaFormulae": { + "name": "JuliaFormulae", + "version": "0.1.0", + "sha256": "0m1rn9ix66p5qgzhvlw1a7j91k21pc6kmfjr3p1c62fq6jdrzgip", + "depends": ["rrapply"] + }, "JustifyAlpha": { "name": "JustifyAlpha", "version": "0.1.1", "sha256": "0bd7sn4sn95kal5q2x1q78fsk1mhakr5fax3z6ny2yda2h266af9", - "depends": ["BayesFactor", "ggplot2", "pwr", "qpdf", "shiny", "shinydashboard", "stringr", "Superpower"] + "depends": ["BayesFactor", "Superpower", "ggplot2", "pwr", "qpdf", "shiny", "shinydashboard", "stringr"] }, "KCSKNNShiny": { "name": "KCSKNNShiny", "version": "0.1.0", "sha256": "13gzqf3g7vj8cc0xm5902q7lad2way8d0ri1fs01dnv97wmwbxvn", - "depends": ["caret", "dplyr", "FNN", "rhandsontable", "shiny"] + "depends": ["FNN", "caret", "dplyr", "rhandsontable", "shiny"] }, "KCSNBShiny": { "name": "KCSNBShiny", @@ -15887,7 +16085,7 @@ "name": "KGode", "version": "1.0.4", "sha256": "0q39x34rwya3pqhvly1g0n2ykzvwrwdpdnp3y3ya9cyai63l2sgn", - "depends": ["mvtnorm", "pracma", "pspline", "R6"] + "depends": ["R6", "mvtnorm", "pracma", "pspline"] }, "KHQ": { "name": "KHQ", @@ -15903,9 +16101,9 @@ }, "KLINK": { "name": "KLINK", - "version": "0.7.3", - "sha256": "1q2znry97rly1nj7crqqfm5c41sxcia6i4b080ccdwzap26pm17i", - "depends": ["forrel", "gt", "openxlsx", "pedFamilias", "pedmut", "pedprobr", "pedtools", "shiny", "shinydashboard", "verbalisr", "zip"] + "version": "1.0.0", + "sha256": "0gx8kvpyv149g1vk17ym8zfyv0wg4qgmp314vsfv140a9mj2f051", + "depends": ["forrel", "gt", "openxlsx", "pedFamilias", "pedmut", "pedprobr", "pedtools", "shiny", "shinydashboard", "shinyjs", "verbalisr", "xml2"] }, "KLexp": { "name": "KLexp", @@ -15917,7 +16115,7 @@ "name": "KMD", "version": "0.1.0", "sha256": "0sgcfh5b4dl1gy3dxsdsqgmyfrd6kqrzvxv9g4slskwyrjsirsp5", - "depends": ["boot", "data_table", "igraph", "mlpack", "proxy", "RANN"] + "depends": ["RANN", "boot", "data_table", "igraph", "mlpack", "proxy"] }, "KMEANS_KNN": { "name": "KMEANS.KNN", @@ -15947,13 +16145,13 @@ "name": "KNNShiny", "version": "0.1.0", "sha256": "16zm8bhdivaap3mvhdx2qn1b1j2iqyarclb0y2qd1n4viwcfm9c1", - "depends": ["caret", "dplyr", "e1071", "FNN", "psycho", "rhandsontable", "rmarkdown", "shiny"] + "depends": ["FNN", "caret", "dplyr", "e1071", "psycho", "rhandsontable", "rmarkdown", "shiny"] }, "KODAMA": { "name": "KODAMA", "version": "2.4", "sha256": "1rw5xjv5sblhj5mr31hgv472gial5bl4f288db07ysgkjqsymwkq", - "depends": ["minerva", "Rcpp", "RcppArmadillo", "Rtsne", "umap"] + "depends": ["Rcpp", "RcppArmadillo", "Rtsne", "minerva", "umap"] }, "KOGMWU": { "name": "KOGMWU", @@ -15977,7 +16175,7 @@ "name": "KPC", "version": "0.1.2", "sha256": "1i9kpr0pib6a8qn7ibmhbay4vxr96ca4kcp5aswmlvcv4ycmw6lx", - "depends": ["data_table", "kernlab", "mlpack", "proxy", "RANN"] + "depends": ["RANN", "data_table", "kernlab", "mlpack", "proxy"] }, "KRIS": { "name": "KRIS", @@ -15995,7 +16193,7 @@ "name": "KRMM", "version": "1.0", "sha256": "0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk", - "depends": ["cvTools", "kernlab", "MASS", "robustbase"] + "depends": ["MASS", "cvTools", "kernlab", "robustbase"] }, "KSA": { "name": "KSA", @@ -16025,13 +16223,13 @@ "name": "KScorrect", "version": "1.4.0", "sha256": "1khvwc610yp3fd4fn0wcgqpzxg9g7sicjjmwvfcahs8qxn3m5vfa", - "depends": ["doParallel", "foreach", "iterators", "MASS", "mclust"] + "depends": ["MASS", "doParallel", "foreach", "iterators", "mclust"] }, "KSgeneral": { "name": "KSgeneral", - "version": "2.0.0", - "sha256": "0m3qr65366vqb8pbjidmvlcz5prwmrzcrcs0scsnqcyvwrlwyf0l", - "depends": ["dgof", "MASS", "Rcpp"] + "version": "2.0.2", + "sha256": "155fr49pvsbjkjh96aidw3fs6gb4q1i9c9v7qmk7nnfh6gnx0q3c", + "depends": ["MASS", "Rcpp", "dgof"] }, "KTensorGraphs": { "name": "KTensorGraphs", @@ -16055,13 +16253,13 @@ "name": "Karen", "version": "1.0", "sha256": "1yy80j15lra1zmak3klvqspy9ikhr0v7csl88l9cpbdpp73972by", - "depends": ["abind", "expm", "gaussquad", "igraph", "MASS", "Matrix", "mvtnorm", "scales", "stringr", "tmvtnorm", "xtable"] + "depends": ["MASS", "Matrix", "abind", "expm", "gaussquad", "igraph", "mvtnorm", "scales", "stringr", "tmvtnorm", "xtable"] }, "KarsTS": { "name": "KarsTS", "version": "2.4.1", "sha256": "1km8321a8vzff26g3x2hvdv5ciyk3fdpcn7g1xqbsx96fzxyd22n", - "depends": ["circular", "forecast", "infotheo", "mgcv", "missForest", "MVN", "nonlinearTseries", "plot3D", "rgl", "stinepack", "stlplus", "tcltk2", "tseries", "tseriesChaos", "zoo"] + "depends": ["MVN", "circular", "forecast", "infotheo", "mgcv", "missForest", "nonlinearTseries", "plot3D", "rgl", "stinepack", "stlplus", "tcltk2", "tseries", "tseriesChaos", "zoo"] }, "KbMvtSkew": { "name": "KbMvtSkew", @@ -16097,7 +16295,7 @@ "name": "KernSmoothIRT", "version": "6.4", "sha256": "0qqlmcd04m89pmhrbmxxx4lzzb6sksgrm0j8x7fs5r0sxdqy6rcp", - "depends": ["plotrix", "Rcpp", "rgl"] + "depends": ["Rcpp", "plotrix", "rgl"] }, "KernelKnn": { "name": "KernelKnn", @@ -16109,19 +16307,19 @@ "name": "Kernelheaping", "version": "2.3.0", "sha256": "0nd8kbprpm2jrpnqr4xb4z8wklv5js2y3kdpjc2q0ay229hf85j8", - "depends": ["dplyr", "fastmatch", "fitdistrplus", "GB2", "ks", "magrittr", "MASS", "mvtnorm", "plyr", "sp", "sparr"] + "depends": ["GB2", "MASS", "dplyr", "fastmatch", "fitdistrplus", "ks", "magrittr", "mvtnorm", "plyr", "sp", "sparr"] }, "Keyboard": { "name": "Keyboard", "version": "0.1.3", "sha256": "1yfcn1r0zngc1nlj5axqps8an66p1q1qmxwagxq2q15d9qipb5wh", - "depends": ["ggplot2", "Iso", "Rcpp"] + "depends": ["Iso", "Rcpp", "ggplot2"] }, "KinMixLite": { "name": "KinMixLite", "version": "2.1.0", "sha256": "17kjb12r35b42ghkv6mp0jk115gn2dlwc8cdf92cm9jjn4k9am9a", - "depends": ["DNAmixturesLite", "gRaven", "gRbase", "Matrix", "numDeriv", "pedtools", "ribd", "Rsolnp", "statnet_common"] + "depends": ["DNAmixturesLite", "Matrix", "Rsolnp", "gRaven", "gRbase", "numDeriv", "pedtools", "ribd", "statnet_common"] }, "KingCountyHouses": { "name": "KingCountyHouses", @@ -16131,15 +16329,15 @@ }, "Kira": { "name": "Kira", - "version": "1.0.3", - "sha256": "02h80rmrkggmavbvz1d6p3q7gllf8m6g7vx2k01hxy1c8l237i2b", + "version": "1.0.5", + "sha256": "1ynf31wy93agwn5apaskyj3whdzgb83r4j4h0b455f2j7h5yac49", "depends": ["MASS"] }, "Kmedians": { "name": "Kmedians", "version": "2.2.0", "sha256": "0bsbwxv0a9b6g89h7v876hm5p97viwbczz851ngjv5li5qzvlpxs", - "depends": ["capushe", "doParallel", "foreach", "genieclust", "ggplot2", "Gmedian", "mvtnorm", "reshape2"] + "depends": ["Gmedian", "capushe", "doParallel", "foreach", "genieclust", "ggplot2", "mvtnorm", "reshape2"] }, "KnapsackSampling": { "name": "KnapsackSampling", @@ -16157,13 +16355,13 @@ "name": "KnockoffHybrid", "version": "1.0.1", "sha256": "0ziqnhs2ipnzrh4ndjppcf2w3s13mwsza7w2s5dgfd70i0f6nk7v", - "depends": ["glmnet", "SPAtest"] + "depends": ["SPAtest", "glmnet"] }, "KnockoffScreen": { "name": "KnockoffScreen", "version": "0.3.0", "sha256": "01r04d9ha9l5pkz3lwdcb5x5qqwk8vil9avnbnfn76wg63mdfhbk", - "depends": ["bigmemory", "CompQuadForm", "data_table", "irlba", "Matrix", "seqminer", "SPAtest"] + "depends": ["CompQuadForm", "Matrix", "SPAtest", "bigmemory", "data_table", "irlba", "seqminer"] }, "KnockoffTrio": { "name": "KnockoffTrio", @@ -16181,13 +16379,13 @@ "name": "KoboconnectR", "version": "1.2.2", "sha256": "09cg03hd8wp458d487qbx6giqqw6lc0gavx8isn067wqyfsscg16", - "depends": ["curl", "dplyr", "httr", "jsonlite", "mime", "openssl", "purrr", "R6", "readxl", "rlang"] + "depends": ["R6", "curl", "dplyr", "httr", "jsonlite", "mime", "openssl", "purrr", "readxl", "rlang"] }, "KoulMde": { "name": "KoulMde", "version": "3.2.1", "sha256": "0yx04my2vwjpi4l35h1i5xwqckca8b72divww39y1frcvia33g08", - "depends": ["expm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "expm"] }, "Kpart": { "name": "Kpart", @@ -16205,7 +16403,7 @@ "name": "KrigInv", "version": "1.4.2", "sha256": "01i953b0xrqrwbgzv8giz4dmcbc18jni9whhkmpg8sxvhqac59ns", - "depends": ["anMC", "DiceKriging", "mvtnorm", "pbivnorm", "randtoolbox", "rgenoud"] + "depends": ["DiceKriging", "anMC", "mvtnorm", "pbivnorm", "randtoolbox", "rgenoud"] }, "Kurt": { "name": "Kurt", @@ -16217,13 +16415,13 @@ "name": "L0Learn", "version": "2.1.0", "sha256": "050r2rqmqgwmal53d82vi0nhnzzrm4q8mqz0pbpj77blflbqy740", - "depends": ["ggplot2", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "reshape2"] }, "L1centrality": { "name": "L1centrality", "version": "0.1.1", "sha256": "1qjvyplkc957mhcyd4fly6il93mm5bj2v6azmr4vqc31lpx7j295", - "depends": ["igraph", "Rcpp", "withr"] + "depends": ["Rcpp", "igraph", "withr"] }, "L1pack": { "name": "L1pack", @@ -16241,7 +16439,7 @@ "name": "L2E", "version": "2.0", "sha256": "1ar8jmi7nddp6f5rfh8zvh8w8zkigdf1zjzdr5fz8zqj2ny5hy30", - "depends": ["cobs", "isotone", "Matrix", "ncvreg", "osqp", "robustbase", "signal"] + "depends": ["Matrix", "cobs", "isotone", "ncvreg", "osqp", "robustbase", "signal"] }, "L2hdchange": { "name": "L2hdchange", @@ -16275,8 +16473,8 @@ }, "LAM": { "name": "LAM", - "version": "0.6-19", - "sha256": "1bns8m48rlkv1d87wvhlvkplr8kpm2rda5wb9xcvjqr7bf65nk8b", + "version": "0.7-22", + "sha256": "02kssj47nmps5yf4hqa2g9mwbml52gckj19w7mpqahzlnzib9xi3", "depends": ["CDM", "Rcpp", "RcppArmadillo", "sirt"] }, "LARF": { @@ -16289,7 +16487,7 @@ "name": "LARisk", "version": "1.0.0", "sha256": "13d008v8aypqlx35bf16y7rcfcv5qnbsi8q0zpfcl03rzxmqpb8b", - "depends": ["dplyr", "Rcpp"] + "depends": ["Rcpp", "dplyr"] }, "LATERmodel": { "name": "LATERmodel", @@ -16301,12 +16499,12 @@ "name": "LAWBL", "version": "1.5.0", "sha256": "0vqjp00nviyl6ghbjn2ayj3k0x2a7hihff0w0x7xwqv3z8x0mh8g", - "depends": ["coda", "MASS"] + "depends": ["MASS", "coda"] }, "LBI": { "name": "LBI", - "version": "0.1.2", - "sha256": "18hnvhgl2lji5jawxir1fw7qcmky48qnh8xb5gmnxff8mplwjk0c", + "version": "0.1.3", + "sha256": "1fh121dl4d3i67blgibq087zs5li8zg7j284xgcgk5i789a80ksh", "depends": [] }, "LBPG": { @@ -16319,7 +16517,7 @@ "name": "LBSPR", "version": "0.1.6", "sha256": "075wcjhvp90fj37ihrplnrc0vy8wpav5qivkw1rgv00fa8xj7pw0", - "depends": ["dplyr", "ggplot2", "gridExtra", "plotrix", "RColorBrewer", "Rcpp", "shiny", "tidyr"] + "depends": ["RColorBrewer", "Rcpp", "dplyr", "ggplot2", "gridExtra", "plotrix", "shiny", "tidyr"] }, "LCA": { "name": "LCA", @@ -16337,7 +16535,7 @@ "name": "LCAvarsel", "version": "1.1", "sha256": "0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1", - "depends": ["doParallel", "foreach", "GA", "MASS", "memoise", "nnet", "poLCA"] + "depends": ["GA", "MASS", "doParallel", "foreach", "memoise", "nnet", "poLCA"] }, "LCCR": { "name": "LCCR", @@ -16367,19 +16565,19 @@ "name": "LCMSQA", "version": "1.0.2", "sha256": "07lgqn8m2aqblm6539d5vrq9hklrjbpxi21zn93nf4akm57lvdxh", - "depends": ["bsplus", "data_table", "DT", "ggplot2", "plotly", "shiny", "shinycssloaders", "shinyjs", "shinyWidgets"] + "depends": ["DT", "bsplus", "data_table", "ggplot2", "plotly", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs"] }, "LDABiplots": { "name": "LDABiplots", "version": "0.1.2", "sha256": "0vcc2s0qyib9l7sdflxbfanraxw5hqjlp24v8yg3z9i65y5gzbaw", - "depends": ["chinese_misc", "dplyr", "DT", "factoextra", "ggplot2", "ggrepel", "glasso", "highcharter", "htmlwidgets", "ldatuning", "Matrix", "qgraph", "quanteda", "rvest", "shiny", "shinyalert", "shinyBS", "shinybusy", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "SnowballC", "stringr", "textmineR", "textplot", "tidyr", "topicmodels"] + "depends": ["DT", "Matrix", "SnowballC", "chinese_misc", "dplyr", "factoextra", "ggplot2", "ggrepel", "glasso", "highcharter", "htmlwidgets", "ldatuning", "qgraph", "quanteda", "rvest", "shiny", "shinyBS", "shinyWidgets", "shinyalert", "shinybusy", "shinycssloaders", "shinydashboard", "shinyjs", "stringr", "textmineR", "textplot", "tidyr", "topicmodels"] }, "LDAShiny": { "name": "LDAShiny", "version": "0.9.3", "sha256": "0iql2fcg7fkyggdwmb6mhn54vhki6v206mkc5km41fjiqss2b4ni", - "depends": ["beepr", "broom", "chinese_misc", "dplyr", "DT", "highcharter", "htmlwidgets", "ldatuning", "plotly", "purrr", "quanteda", "shiny", "shinyalert", "shinyBS", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "SnowballC", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels"] + "depends": ["DT", "SnowballC", "beepr", "broom", "chinese_misc", "dplyr", "highcharter", "htmlwidgets", "ldatuning", "plotly", "purrr", "quanteda", "shiny", "shinyBS", "shinyWidgets", "shinyalert", "shinycssloaders", "shinydashboard", "shinyjs", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels"] }, "LDATS": { "name": "LDATS", @@ -16401,27 +16599,27 @@ }, "LDAcoop": { "name": "LDAcoop", - "version": "0.1.1", - "sha256": "1a2935kqd7pxdpgc1v6inx9z963dd33scc9viwdfbd0s6vlj8lq8", + "version": "0.1.2", + "sha256": "0nvf4j0akpbh03b2rldfzrvzkyxgjq0i375qxbxi96lm4h8yayfh", "depends": ["Hmisc"] }, "LDAvis": { "name": "LDAvis", "version": "0.3.2", "sha256": "1y9wd379rfv3rd3f65ll21nvh6i8yafvv11f8gw8nn06194dgfzg", - "depends": ["proxy", "RJSONIO"] + "depends": ["RJSONIO", "proxy"] }, "LDLcalc": { "name": "LDLcalc", "version": "2.1", "sha256": "0bw0a7dh8j215y09n17w1zvnx72s9i5pv509wayl46wl2v6zz4rx", - "depends": ["caret", "caretEnsemble", "corrplot", "data_table", "ggplot2", "janitor", "lares", "lattice", "moments", "philentropy", "RColorBrewer", "resample"] + "depends": ["RColorBrewer", "caret", "caretEnsemble", "corrplot", "data_table", "ggplot2", "janitor", "lares", "lattice", "moments", "philentropy", "resample"] }, "LDM": { "name": "LDM", "version": "6.0.1", "sha256": "1943kw0aznjv82wps952wcab8jh7wh3hkav59q6xgk9zmf4day1d", - "depends": ["BiocParallel", "castor", "GUniFrac", "matrixStats", "modeest", "permute", "phangorn", "vegan"] + "depends": ["BiocParallel", "GUniFrac", "castor", "matrixStats", "modeest", "permute", "phangorn", "vegan"] }, "LDNN": { "name": "LDNN", @@ -16451,13 +16649,13 @@ "name": "LEGIT", "version": "1.4.1", "sha256": "0rwcbckkpmm849yl4rrk97ai31wb89sizbp7974rrfrjb707xl4i", - "depends": ["boot", "doSNOW", "foreach", "formula_tools", "glmnet", "Hmisc", "iterators", "lme4", "pROC", "RColorBrewer", "snow"] + "depends": ["Hmisc", "RColorBrewer", "boot", "doSNOW", "foreach", "formula_tools", "glmnet", "iterators", "lme4", "pROC", "snow"] }, "LFApp": { "name": "LFApp", "version": "1.4.1", "sha256": "1gdapv0nxwxpg1sfc759lh9x8d4whp7h3102xb95sxi3h9xjaqin", - "depends": ["DT", "EBImage", "fs", "ggplot2", "mgcv", "shiny", "shinyFiles", "shinyjs", "shinyMobile", "shinythemes"] + "depends": ["DT", "EBImage", "fs", "ggplot2", "mgcv", "shiny", "shinyFiles", "shinyMobile", "shinyjs", "shinythemes"] }, "LFDR_MLE": { "name": "LFDR.MLE", @@ -16475,7 +16673,7 @@ "name": "LFDREmpiricalBayes", "version": "1.0", "sha256": "1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b", - "depends": ["matrixStats", "R6"] + "depends": ["R6", "matrixStats"] }, "LGDtoolkit": { "name": "LGDtoolkit", @@ -16487,13 +16685,13 @@ "name": "LGEWIS", "version": "1.1", "sha256": "1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r", - "depends": ["CompQuadForm", "geeM", "mvtnorm", "SKAT"] + "depends": ["CompQuadForm", "SKAT", "geeM", "mvtnorm"] }, "LGRF": { "name": "LGRF", "version": "1.0", "sha256": "1kdx6y55aa9n6v43zfz6jk8amvvxbx79sqm1jx4ihgkpgcdglan7", - "depends": ["CompQuadForm", "geepack", "SKAT"] + "depends": ["CompQuadForm", "SKAT", "geepack"] }, "LHD": { "name": "LHD", @@ -16517,7 +16715,7 @@ "name": "LINselect", "version": "1.1.5", "sha256": "0sd2b0wqmf51x7hxpx2mgymsgn1abzwdiaxp66708pg5nskg48ah", - "depends": ["elasticnet", "gtools", "MASS", "mvtnorm", "pls", "randomForest"] + "depends": ["MASS", "elasticnet", "gtools", "mvtnorm", "pls", "randomForest"] }, "LIStest": { "name": "LIStest", @@ -16527,15 +16725,15 @@ }, "LKT": { "name": "LKT", - "version": "1.6.0", - "sha256": "0a57817ddni9hl916dvs3spsvqpjfnla8dyrl2v8q5y0faqhagml", - "depends": ["cluster", "crayon", "data_table", "glmnet", "glmnetUtils", "HDInterval", "LiblineaR", "lme4", "Matrix", "pROC", "SparseM"] + "version": "1.7.0", + "sha256": "163vg974x7bav5fc6sd8pnnrkwcwy6kqdd66k8zg89m8jmy9iffp", + "depends": ["HDInterval", "LiblineaR", "Matrix", "SparseM", "cluster", "crayon", "data_table", "glmnet", "glmnetUtils", "lme4", "pROC"] }, "LLM": { "name": "LLM", "version": "1.1.0", "sha256": "0kxppzaim7cmjawg5rjih4dsz8adq0asairgq3vx5lyjppb2cybx", - "depends": ["partykit", "reghelper", "RWeka", "scales", "stringr", "survey"] + "depends": ["RWeka", "partykit", "reghelper", "scales", "stringr", "survey"] }, "LLSR": { "name": "LLSR", @@ -16553,25 +16751,25 @@ "name": "LMERConvenienceFunctions", "version": "3.0", "sha256": "0jg889qh5a9wdi01yiw6z7kivs9dzh5dcq39f4zifdpqzglhshzb", - "depends": ["fields", "LCFdata", "lme4", "Matrix", "mgcv"] + "depends": ["LCFdata", "Matrix", "fields", "lme4", "mgcv"] }, "LMMELSM": { "name": "LMMELSM", "version": "0.2.0", "sha256": "0m57hsfpgxch5lmpdxqp720jv18as12drpx1p5x3y4w0navslslz", - "depends": ["BH", "Formula", "loo", "MASS", "nlme", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Formula", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "loo", "nlme", "rstan", "rstantools"] }, "LMMsolver": { "name": "LMMsolver", "version": "1.0.7", "sha256": "0vzgbq2hpj65c7y1gkxz80smrl693basffkvv9gb7l29ifp10gs5", - "depends": ["agridat", "ggplot2", "maps", "Matrix", "Rcpp", "sf", "spam"] + "depends": ["Matrix", "Rcpp", "agridat", "ggplot2", "maps", "sf", "spam"] }, "LMMstar": { "name": "LMMstar", "version": "1.1.0", "sha256": "1hfj69iq9ina23kyz4xvp1xfvg4klzhi6kvfqng4amazlh1vncb1", - "depends": ["copula", "doParallel", "foreach", "ggplot2", "lava", "Matrix", "multcomp", "nlme", "numDeriv", "rlang"] + "depends": ["Matrix", "copula", "doParallel", "foreach", "ggplot2", "lava", "multcomp", "nlme", "numDeriv", "rlang"] }, "LMN": { "name": "LMN", @@ -16579,11 +16777,17 @@ "sha256": "0qnc74m2g4fl1cb39xmanvv1hwcnk0169xn4h4phlhxgr0313m63", "depends": ["Rcpp", "RcppEigen", "SuperGauss"] }, + "LMPdata": { + "name": "LMPdata", + "version": "0.1.0", + "sha256": "0k92ps7rjj2s2n2sa9v840nf6h87sws5fimijz1kpmjj5i96qkik", + "depends": ["data_table", "magrittr"] + }, "LMest": { "name": "LMest", "version": "3.1.2", "sha256": "0a9lch9bylhy5r4v865lwzzz9qqi98na8bfnr5ga8kzy7akbnza0", - "depends": ["diagram", "Formula", "MASS", "mclust", "mix", "MultiLCIRT", "mvtnorm", "scatterplot3d"] + "depends": ["Formula", "MASS", "MultiLCIRT", "diagram", "mclust", "mix", "mvtnorm", "scatterplot3d"] }, "LMfilteR": { "name": "LMfilteR", @@ -16613,7 +16817,7 @@ "name": "LOCUS", "version": "1.0", "sha256": "16hfgj7ilwqlywy3xhfag4fwrbbfqvlmwi55chskc8s2km997pdb", - "depends": ["far", "ica", "MASS"] + "depends": ["MASS", "far", "ica"] }, "LOGAN": { "name": "LOGAN", @@ -16625,25 +16829,25 @@ "name": "LOGANTree", "version": "0.1.1", "sha256": "0zbll6bb9c3zrmnw8ccknfi6my4pkv0pq4hq742w393nni3dlahq", - "depends": ["caret", "caretEnsemble", "dplyr", "gbm", "ggplot2", "ROCR", "rpart_plot", "tibble"] + "depends": ["ROCR", "caret", "caretEnsemble", "dplyr", "gbm", "ggplot2", "rpart_plot", "tibble"] }, "LOMAR": { "name": "LOMAR", "version": "0.4.0", "sha256": "148n4fmz3j0i042kc6jmf839ylsgxapfx9zx8999mlg77scwmdzi", - "depends": ["alphashape3d", "aws", "BH", "data_table", "dbscan", "doParallel", "EBImage", "ff", "FNN", "foreach", "mclust", "pracma", "proxy", "RANN", "Rcpp", "reshape2", "rhdf5", "transport"] + "depends": ["BH", "EBImage", "FNN", "RANN", "Rcpp", "alphashape3d", "aws", "data_table", "dbscan", "doParallel", "ff", "foreach", "mclust", "pracma", "proxy", "reshape2", "rhdf5", "transport"] }, "LOPART": { "name": "LOPART", - "version": "2020.6.29", - "sha256": "1zxaag5pj3l9rzxhlrkx8q4adlap7wsdysb4y6ijvsmxvv63j22k", - "depends": ["data_table", "Rcpp"] + "version": "2024.6.19", + "sha256": "1y3jvg97n15iwp7v71jm5l765k3lz3c7jp0y2apz0is9wc02q5la", + "depends": ["Rcpp", "data_table"] }, "LOST": { "name": "LOST", - "version": "2.0.2", - "sha256": "15ggmvjy2k4j692y9h3anfzmb0hgnx66cbr76grwvcfysdx87ick", - "depends": ["e1071", "gdata", "geomorph", "MASS", "miscTools", "pcaMethods", "rgl", "shapes"] + "version": "2.1.1", + "sha256": "1zcs8vq4nkn059lfyw0nlb4wnn1rq2s1qiw1ggsr3mb847wka6ry", + "depends": ["MASS", "e1071", "gdata", "geomorph", "miscTools", "pcaMethods", "rgl", "shapes"] }, "LPBkg": { "name": "LPBkg", @@ -16661,25 +16865,25 @@ "name": "LPGraph", "version": "2.1", "sha256": "1d2kslravi3v9kf6sdabwfpa9s9xxqj3s3d7f7qfcrpfydqixq1q", - "depends": ["car", "PMA"] + "depends": ["PMA", "car"] }, "LPKsample": { "name": "LPKsample", "version": "2.1", "sha256": "0ifhx8w9f6sacmnck2g7i7r742i8bwwzf0rgajw3klw2wni9ikqx", - "depends": ["apcluster", "igraph", "LPGraph", "mclust"] + "depends": ["LPGraph", "apcluster", "igraph", "mclust"] }, "LPM": { "name": "LPM", "version": "3.2", "sha256": "0xyyfvaa65wi3vz252y59hv4018bw6xwa24rs9d6w53b3slr7pnn", - "depends": ["fracdiff", "MASS", "powdist"] + "depends": ["MASS", "fracdiff", "powdist"] }, "LPRelevance": { "name": "LPRelevance", "version": "3.3", "sha256": "1harwhgqd9swyljijj7bfir176an92kdy8mik1q0nbc061jdgx0i", - "depends": ["BayesGOF", "Bolstad2", "caret", "ggplot2", "glmnet", "leaps", "locfdr", "MASS", "polynom", "reshape2"] + "depends": ["BayesGOF", "Bolstad2", "MASS", "caret", "ggplot2", "glmnet", "leaps", "locfdr", "polynom", "reshape2"] }, "LPS": { "name": "LPS", @@ -16721,7 +16925,7 @@ "name": "LRMF3", "version": "0.1.0", "sha256": "0j9hnin3yic118766if6gysq0g4mkqw40b0873g4ggjkgxndxrqn", - "depends": ["glue", "Matrix"] + "depends": ["Matrix", "glue"] }, "LRTesteR": { "name": "LRTesteR", @@ -16767,9 +16971,9 @@ }, "LSDinterface": { "name": "LSDinterface", - "version": "1.2.1", - "sha256": "0zp7bgdbcah6hsfqbz7lq6f7g8xcqhjsr7pjpwjf9brnmy0l7xki", - "depends": ["abind", "boot", "TSdist"] + "version": "1.2.2", + "sha256": "10g7hlqg99hjachjsfa7bx1s7h4f7avf3jway7zdmagv0kh54rxs", + "depends": ["TSdist", "abind", "boot"] }, "LSDirf": { "name": "LSDirf", @@ -16781,7 +16985,7 @@ "name": "LSDsensitivity", "version": "1.2.3", "sha256": "1qq19f7k6klq7xpa1iq6spm8kbiy229r2wbwkng6rkn7jj2kcd70", - "depends": ["abind", "car", "DiceKriging", "diptest", "kSamples", "lawstat", "LSDinterface", "randtoolbox", "rgenoud", "sensitivity", "tseries"] + "depends": ["DiceKriging", "LSDinterface", "abind", "car", "diptest", "kSamples", "lawstat", "randtoolbox", "rgenoud", "sensitivity", "tseries"] }, "LSE": { "name": "LSE", @@ -16789,6 +16993,12 @@ "sha256": "01qj0zasv7dbwg0qxryz1d5jp4rapvnm9i6a4jd7c4pxqdm11j7y", "depends": ["MASS", "pracma"] }, + "LSEbootLS": { + "name": "LSEbootLS", + "version": "0.1.0", + "sha256": "11ckfrlhz4zgz5bzbvbrx5j8dcxs2ka4xv8f2b2mlpv6jr9f5h1y", + "depends": ["LSTS", "doParallel", "doRNG", "foreach", "iterators", "rlecuyer", "tibble"] + }, "LSMRealOptions": { "name": "LSMRealOptions", "version": "0.2.1", @@ -16805,7 +17015,7 @@ "name": "LSPFP", "version": "1.0.3", "sha256": "0wxqpwfyyhk9dig9ji5na7czk19jx14lr9iqb2rllggz4cji9y65", - "depends": ["bit64", "data_table", "R_utils", "RCurl", "seqinr"] + "depends": ["RCurl", "R_utils", "bit64", "data_table", "seqinr"] }, "LSRS": { "name": "LSRS", @@ -16823,13 +17033,13 @@ "name": "LSTS", "version": "2.1", "sha256": "0pxcw5awm6fr6v1n8gd7yap0y1mba9khwgq27qlv9h2kmrzbr3hp", - "depends": ["ggplot2", "patchwork", "Rdpack", "scales"] + "depends": ["Rdpack", "ggplot2", "patchwork", "scales"] }, "LSTbook": { "name": "LSTbook", "version": "0.5.0", "sha256": "140b0zd8zqlx5qqyq39nq0dhnamvh92lgix0zx4x57x46bzp5rs9", - "depends": ["broom", "dplyr", "ggplot2", "glue", "MASS", "rlang", "stringi", "tibble"] + "depends": ["MASS", "broom", "dplyr", "ggplot2", "glue", "rlang", "stringi", "tibble"] }, "LSVAR": { "name": "LSVAR", @@ -16847,7 +17057,7 @@ "name": "LSX", "version": "1.4.0", "sha256": "1qch23k8qs9v19npsh90nxv8wznp1lqga8k995117vsjj8h7i7s3", - "depends": ["digest", "ggplot2", "ggrepel", "irlba", "locfit", "Matrix", "proxyC", "quanteda", "quanteda_textstats", "reshape2", "rsparse", "RSpectra", "rsvd", "stringi"] + "depends": ["Matrix", "RSpectra", "digest", "ggplot2", "ggrepel", "irlba", "locfit", "proxyC", "quanteda", "quanteda_textstats", "reshape2", "rsparse", "rsvd", "stringi"] }, "LTAR": { "name": "LTAR", @@ -16859,7 +17069,7 @@ "name": "LTASR", "version": "0.1.3", "sha256": "1dab18np0jkb9s8lkrmsk52h0f714ry851kvbnqs2kdl3zrsrl2f", - "depends": ["dplyr", "knitr", "lubridate", "magrittr", "purrr", "readr", "rlang", "stringr", "tidyr", "XML", "zoo"] + "depends": ["XML", "dplyr", "knitr", "lubridate", "magrittr", "purrr", "readr", "rlang", "stringr", "tidyr", "zoo"] }, "LTCDM": { "name": "LTCDM", @@ -16871,7 +17081,7 @@ "name": "LTFHPlus", "version": "2.1.1", "sha256": "0f8xww6n2r54c26idi6ixfk89dff7c14dljvpaa71yxm0rb0isff", - "depends": ["batchmeans", "dplyr", "future", "future_apply", "igraph", "purrr", "Rcpp", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "tmvtnorm", "xgboost"] + "depends": ["Rcpp", "batchmeans", "dplyr", "future", "future_apply", "igraph", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "tmvtnorm", "xgboost"] }, "LTPDvar": { "name": "LTPDvar", @@ -16889,12 +17099,12 @@ "name": "LTRCtrees", "version": "1.1.1", "sha256": "1k16m2fpwn8m4dvm1b82srf3bgkvkwf6kcjpwjgkdappifc7p5m8", - "depends": ["icenReg", "Icens", "interval", "inum", "partykit", "rpart", "survival"] + "depends": ["Icens", "icenReg", "interval", "inum", "partykit", "rpart", "survival"] }, "LUCIDus": { "name": "LUCIDus", - "version": "3.0.1", - "sha256": "0y8l82q5qzc9k88cc7afqnlixrnfamm58j2fxz22x37yxaad20j1", + "version": "3.0.2", + "sha256": "0wy35s0cnnx04ic8gpf4ikm4mpxm72x4k3hrp2h6gz8fmb6iw1qm", "depends": ["boot", "glasso", "glmnet", "jsonlite", "mclust", "networkD3", "nnet", "progress"] }, "LVGP": { @@ -16931,7 +17141,7 @@ "name": "LaMa", "version": "1.0.0", "sha256": "02s13hpkw9h123wmcgawypqrskd0ivciwabv9djw9l66yk79rjix", - "depends": ["mgcv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mgcv"] }, "LabApplStat": { "name": "LabApplStat", @@ -16953,8 +17163,8 @@ }, "LadderFuelsR": { "name": "LadderFuelsR", - "version": "0.0.4", - "sha256": "16x3f6hl5qby05z2yd319454rwss77kmy2xq549z7hhypw1mxqmq", + "version": "0.0.6", + "sha256": "0amdnn0n8rb5dmm9cmj7bw9kidal3agd6m3655xal2ay62rxq6mn", "depends": ["dplyr", "gdata", "ggplot2", "magrittr", "segmented", "stringr", "tibble", "tidyr", "tidyselect"] }, "LagSequential": { @@ -16979,7 +17189,7 @@ "name": "LambertW", "version": "0.6.9-1", "sha256": "19j6vjhywyzmrf7rsrx5kf0hg8cpk1gn8al24q813jzp0vsv9ljj", - "depends": ["ggplot2", "lamW", "MASS", "RColorBrewer", "Rcpp", "reshape2"] + "depends": ["MASS", "RColorBrewer", "Rcpp", "ggplot2", "lamW", "reshape2"] }, "LandComp": { "name": "LandComp", @@ -16995,8 +17205,8 @@ }, "Langevin": { "name": "Langevin", - "version": "1.3.1", - "sha256": "0sg3way9hlk875dfwbby59qm5dxwq7d763a0xjgjwaygpwqc83kz", + "version": "1.3.2", + "sha256": "18pri14f9x4svcdq100lmzjjqahnkw83z3a62r48pqrs14zap7hw", "depends": ["Rcpp", "RcppArmadillo"] }, "LaplacesDemon": { @@ -17015,7 +17225,7 @@ "name": "LassoGEE", "version": "1.0", "sha256": "1zascnl9hihw0gx2ssmdiv8gcp2672kz9vmsp5vrc2wr9cdcdjz3", - "depends": ["caret", "MASS", "mvtnorm", "PGEE", "Rcpp", "RcppArmadillo", "SimCorMultRes"] + "depends": ["MASS", "PGEE", "Rcpp", "RcppArmadillo", "SimCorMultRes", "caret", "mvtnorm"] }, "LassoNet": { "name": "LassoNet", @@ -17029,10 +17239,16 @@ "sha256": "0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3", "depends": ["glmnet"] }, + "LatentBMA": { + "name": "LatentBMA", + "version": "0.1.1", + "sha256": "0gkcmc87ikq4n3zhga9pi2s3gdcf9h450xm8z4i855kf2h8ib2ky", + "depends": ["ggplot2", "knitr", "mnormt", "progress", "reshape2"] + }, "Laterality": { "name": "Laterality", - "version": "0.9.4", - "sha256": "1p91xnqmiy232i18masqgly5wcp8zzx8kl8y5v0ra6548np31qmf", + "version": "0.9.5", + "sha256": "0n6qr6xbz79acjv2r1gic0cknpnm2cig37nzs7sb6x6hna39yscc", "depends": ["ade4"] }, "LatticeDesign": { @@ -17057,7 +17273,7 @@ "name": "Lavash", "version": "1.0", "sha256": "0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07", - "depends": ["glmnet", "MASS", "pracma"] + "depends": ["MASS", "glmnet", "pracma"] }, "LeArEst": { "name": "LeArEst", @@ -17069,7 +17285,7 @@ "name": "LeMaRns", "version": "0.1.2", "sha256": "0k7mpl2dgy2qvs068mzgfagvlk116p80cxj4dfzjkrr8wzrmwyni", - "depends": ["abind", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "abind"] }, "LeafArea": { "name": "LeafArea", @@ -17171,7 +17387,7 @@ "name": "LifeInsureR", "version": "1.0.0", "sha256": "120pf97hp9rp9ncykpk93xxkrmilz74hksjrylh9vdnmmk1dgwbv", - "depends": ["abind", "dplyr", "kableExtra", "lubridate", "MortalityTables", "objectProperties", "openxlsx", "pander", "R6", "rlang", "rmarkdown", "scales", "stringr", "tidyr"] + "depends": ["MortalityTables", "R6", "abind", "dplyr", "kableExtra", "lubridate", "objectProperties", "openxlsx", "pander", "rlang", "rmarkdown", "scales", "stringr", "tidyr"] }, "LifeTables": { "name": "LifeTables", @@ -17181,9 +17397,9 @@ }, "LifemapR": { "name": "LifemapR", - "version": "1.1.1", - "sha256": "0wwszxbwxncvzcv81jchk9qcd14g0ncsb17lwjcz6vnv6dn1vdlv", - "depends": ["dplyr", "fastmatch", "htmltools", "jsonlite", "leaflet", "leaflet_minicharts", "RCurl", "rlang", "shiny", "tidyr"] + "version": "1.1.4", + "sha256": "0f09lgpsmg45f072901v59niakx65wvmcz67zjzz4lsy35k74q9k", + "depends": ["RCurl", "dplyr", "fastmatch", "htmltools", "jsonlite", "leaflet", "leaflet_minicharts", "rlang", "shiny", "tidyr"] }, "Lifertable": { "name": "Lifertable", @@ -17197,23 +17413,29 @@ "sha256": "097aj0b8gxly3gqvckcl9xcvv60yd06ydagdqzy80zhv4aqgxm5p", "depends": [] }, + "LightLogR": { + "name": "LightLogR", + "version": "0.3.8", + "sha256": "124kd9ai0xxqzdyqj1npa711nkia520glca6a9jqsrsk6ld30765", + "depends": ["cowplot", "dplyr", "flextable", "ggplot2", "ggsci", "ggtext", "hms", "lubridate", "magrittr", "pkgload", "plotly", "purrr", "readr", "rlang", "rsconnect", "scales", "slider", "stringr", "tibble", "tidyr"] + }, "LightningR": { "name": "LightningR", "version": "1.0.2", "sha256": "1va673aw2hgir8ybbjad6dhbs8izs1z4jcikwa7qp3mkv0zqd0vq", - "depends": ["httr", "R6", "RCurl", "RJSONIO"] + "depends": ["R6", "RCurl", "RJSONIO", "httr"] }, "LikertMakeR": { "name": "LikertMakeR", "version": "0.3.0", "sha256": "0hxyrgm88wvaa6b1cggm45f851sg7rzsbcz7745lcl9zmmkw5w1d", - "depends": ["dplyr", "gtools", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "gtools"] }, "LilRhino": { "name": "LilRhino", "version": "1.2.2", "sha256": "1b3wbnzqakjxh3c3s4cxf14nnb1vrbvslqcyn9bh0zbw1arf5ixl", - "depends": ["beepr", "data_table", "dplyr", "e1071", "fastmatch", "FNN", "ggplot2", "keras", "neuralnet", "readr", "SnowballC", "stringi", "tm"] + "depends": ["FNN", "SnowballC", "beepr", "data_table", "dplyr", "e1071", "fastmatch", "ggplot2", "keras", "neuralnet", "readr", "stringi", "tm"] }, "LimnoPalettes": { "name": "LimnoPalettes", @@ -17255,13 +17477,13 @@ "name": "Linkage", "version": "0.9", "sha256": "1qiz163qrmg0zp8kah6hrpa7wm6k6bm8a1xgmd7nhfnyvq67l8zs", - "depends": ["httr", "jsonlite", "network", "RColorBrewer", "sna"] + "depends": ["RColorBrewer", "httr", "jsonlite", "network", "sna"] }, "LinkageMapView": { "name": "LinkageMapView", "version": "2.1.2", "sha256": "101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716", - "depends": ["plotrix", "qtl", "RColorBrewer"] + "depends": ["RColorBrewer", "plotrix", "qtl"] }, "LinkedGASP": { "name": "LinkedGASP", @@ -17285,7 +17507,7 @@ "name": "LipidomicsR", "version": "0.3.6", "sha256": "1mg0lwmhb4rak6gzyypn6nbd8fdgkpxpksgf0vcagh3zlrynshp7", - "depends": ["broom", "car", "cowplot", "dplyr", "fmsb", "ggforce", "ggiraph", "ggplot2", "ggplotify", "ggrepel", "ggsci", "pheatmap", "RColorBrewer", "rcompanion", "reshape2", "scales", "stringr", "tidyr", "tidyselect", "tidyverse"] + "depends": ["RColorBrewer", "broom", "car", "cowplot", "dplyr", "fmsb", "ggforce", "ggiraph", "ggplot2", "ggplotify", "ggrepel", "ggsci", "pheatmap", "rcompanion", "reshape2", "scales", "stringr", "tidyr", "tidyselect", "tidyverse"] }, "LipinskiFilters": { "name": "LipinskiFilters", @@ -17315,7 +17537,7 @@ "name": "LoBrA", "version": "1.0", "sha256": "0rsxkli6xhjwy058skgij2cf3n1lcjsaw3pd51i55l2bpwlrmci6", - "depends": ["lawstat", "nlme", "qpdf", "RColorBrewer"] + "depends": ["RColorBrewer", "lawstat", "nlme", "qpdf"] }, "LobsterCatch": { "name": "LobsterCatch", @@ -17327,7 +17549,7 @@ "name": "LocKer", "version": "1.1", "sha256": "034r6215aigb5hdm2a7cs8qw3nikjdjqnqpn1g27p3lxwfp0n3pr", - "depends": ["fda", "Matrix", "psych"] + "depends": ["Matrix", "fda", "psych"] }, "LocaTT": { "name": "LocaTT", @@ -17339,7 +17561,7 @@ "name": "LocalControl", "version": "1.1.3", "sha256": "0pi5z3i5hmb8nrqg6nyqrd4hx80xjgc5m3ra1z5r8rvjhw4mz0ik", - "depends": ["cluster", "gss", "lattice", "Rcpp"] + "depends": ["Rcpp", "cluster", "gss", "lattice"] }, "LocalCop": { "name": "LocalCop", @@ -17377,6 +17599,12 @@ "sha256": "18xzszw2g4sx08imjwglab0midrchg8z5lr91w0my7ld7vwaxmll", "depends": ["survival"] }, + "LogisticCopula": { + "name": "LogisticCopula", + "version": "0.1.0", + "sha256": "1ld8s3swxx93xh14agpk4ygq3majc52pkdkzp4ma24hxjcasn367", + "depends": ["VineCopula", "brglm2", "igraph", "numDeriv", "rvinecopulib", "stringr"] + }, "LogisticCurveFitting": { "name": "LogisticCurveFitting", "version": "0.1.0", @@ -17399,13 +17627,13 @@ "name": "LongDat", "version": "1.1.2", "sha256": "1rzkb7byd32jqvhf75zyvy0dlkq79aicz8j0x7lk821qiq4dfv6l", - "depends": ["bestNormalize", "car", "dplyr", "effsize", "emmeans", "ggplot2", "glmmTMB", "lme4", "magrittr", "MASS", "patchwork", "reshape2", "rlang", "rstatix", "stringr", "tibble", "tidyr"] + "depends": ["MASS", "bestNormalize", "car", "dplyr", "effsize", "emmeans", "ggplot2", "glmmTMB", "lme4", "magrittr", "patchwork", "reshape2", "rlang", "rstatix", "stringr", "tibble", "tidyr"] }, "LongMemoryTS": { "name": "LongMemoryTS", "version": "0.1.0", "sha256": "0n378sad8i283vs7q63spdhwpwjly2d5zj15d4v2085j7sc7z8vi", - "depends": ["fracdiff", "longmemo", "mvtnorm", "partitions", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "fracdiff", "longmemo", "mvtnorm", "partitions"] }, "LongituRF": { "name": "LongituRF", @@ -17435,7 +17663,7 @@ "name": "LorenzRegression", "version": "1.0.0", "sha256": "1jxz753bcq8b16ncjk6v8c8ylv8brlqd90fdzn9lappm1k4y0r46", - "depends": ["doParallel", "foreach", "GA", "ggplot2", "knitr", "locpol", "MASS", "Rcpp", "RcppArmadillo", "Rearrangement"] + "depends": ["GA", "MASS", "Rcpp", "RcppArmadillo", "Rearrangement", "doParallel", "foreach", "ggplot2", "knitr", "locpol"] }, "LowRankQP": { "name": "LowRankQP", @@ -17447,13 +17675,13 @@ "name": "LowWAFOMNX", "version": "1.1.1", "sha256": "0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x", - "depends": ["Rcpp", "RSQLite"] + "depends": ["RSQLite", "Rcpp"] }, "LowWAFOMSobol": { "name": "LowWAFOMSobol", "version": "1.1.1", "sha256": "1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4", - "depends": ["Rcpp", "RSQLite"] + "depends": ["RSQLite", "Rcpp"] }, "LqG": { "name": "LqG", @@ -17465,19 +17693,19 @@ "name": "Luminescence", "version": "0.9.24", "sha256": "0i4z0pyykvp0kxv5xg2id9p3829wxivvn5lgqickb2xql4rrggp6", - "depends": ["bbmle", "data_table", "DEoptim", "httr", "interp", "lamW", "matrixStats", "mclust", "minpack_lm", "Rcpp", "RcppArmadillo", "readxl", "shape", "XML", "zoo"] + "depends": ["DEoptim", "Rcpp", "RcppArmadillo", "XML", "bbmle", "data_table", "httr", "interp", "lamW", "matrixStats", "mclust", "minpack_lm", "readxl", "shape", "zoo"] }, "M2SMF": { "name": "M2SMF", "version": "2.0", "sha256": "160qjrb3mxybvr4z6zra6rzf6scyrb9mplw36gqlfxj418ndnmm1", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "M2SMJF": { "name": "M2SMJF", "version": "1.0", "sha256": "0v4sg5h3h2pjp996jspv206c8cymjpn1fg38ivaw12s7bmx8j409", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "M3": { "name": "M3", @@ -17489,7 +17717,7 @@ "name": "M3JF", "version": "0.1.0", "sha256": "0sz02cis8xh11fyng44j6al2fkz6ybcabdgg25bbwb3vidf1y197", - "depends": ["dplyr", "InterSIM", "MASS", "SNFtool"] + "depends": ["InterSIM", "MASS", "SNFtool", "dplyr"] }, "MAAPER": { "name": "MAAPER", @@ -17513,13 +17741,13 @@ "name": "MADPop", "version": "1.1.7", "sha256": "0qmn6spp6vfn60h32s58yxngv8gmp1hpl8xni55v6ari0kczw90x", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "MAGEE": { "name": "MAGEE", - "version": "1.4.1", - "sha256": "0xkabvj222xrm62fvaaj0fhdybankz2a01rlxn84n0xvv4hlap7s", - "depends": ["CompQuadForm", "data_table", "foreach", "GMMAT", "MASS", "Matrix", "Rcpp", "RcppArmadillo"] + "version": "1.4.2", + "sha256": "1gwm82iwji0wviy2d3brws9d3iqwgxlkcf4b24b9hcvfl1kgglb6", + "depends": ["CompQuadForm", "GMMAT", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "data_table", "foreach"] }, "MAGMA_R": { "name": "MAGMA.R", @@ -17537,7 +17765,7 @@ "name": "MAINT.Data", "version": "2.7.1", "sha256": "0hjrz25jg4a6kcap01rjjgfvvmg1padd57wgjxihaxpsm7pb0fq9", - "depends": ["GGally", "ggplot2", "MASS", "mclust", "miscTools", "pcaPP", "Rcpp", "RcppArmadillo", "robustbase", "rrcov", "sn", "withr"] + "depends": ["GGally", "MASS", "Rcpp", "RcppArmadillo", "ggplot2", "mclust", "miscTools", "pcaPP", "robustbase", "rrcov", "sn", "withr"] }, "MAKL": { "name": "MAKL", @@ -17555,13 +17783,13 @@ "name": "MALDIquantForeign", "version": "0.14.1", "sha256": "0504a755mccz174g5zcldblwbyg3y11hpxxwpj9bhw937h55zxng", - "depends": ["base64enc", "digest", "MALDIquant", "readBrukerFlexData", "readMzXmlData", "XML"] + "depends": ["MALDIquant", "XML", "base64enc", "digest", "readBrukerFlexData", "readMzXmlData"] }, "MALDIrppa": { "name": "MALDIrppa", "version": "1.1.0-2", "sha256": "1afwkc8dyq51z610z7wnhm95f5j04yj90pxxa33mhdnm2dwsc963", - "depends": ["lattice", "MALDIquant", "robustbase", "signal", "waveslim"] + "depends": ["MALDIquant", "lattice", "robustbase", "signal", "waveslim"] }, "MAMS": { "name": "MAMS", @@ -17579,25 +17807,25 @@ "name": "MANOVA.RM", "version": "0.5.4", "sha256": "03y6qzbh696h282pq8as2zy16y7j95d04qvn3labivd5qygfwfhp", - "depends": ["data_table", "ellipse", "magic", "MASS", "Matrix", "multcomp", "plotrix", "plyr"] + "depends": ["MASS", "Matrix", "data_table", "ellipse", "magic", "multcomp", "plotrix", "plyr"] }, "MAP": { "name": "MAP", "version": "0.1.3", "sha256": "19d0m30jh50ibbdgvcvq1vsz5i1vf8qvl0d0nbqklvnndch61jhk", - "depends": ["flexmix", "Matrix"] + "depends": ["Matrix", "flexmix"] }, "MAPA": { "name": "MAPA", "version": "2.0.7", "sha256": "1f50fkxsdisndxh03ylzqipwh2kr51dai6z8xjhiv28h9ymgz9br", - "depends": ["forecast", "RColorBrewer", "smooth"] + "depends": ["RColorBrewer", "forecast", "smooth"] }, "MAPITR": { "name": "MAPITR", "version": "1.1.2", "sha256": "0vmsdspja4qfs2z14p835g78zggk8h54v25cn268z1hg2p6zxish", - "depends": ["CompQuadForm", "doParallel", "Rcpp", "RcppArmadillo"] + "depends": ["CompQuadForm", "Rcpp", "RcppArmadillo", "doParallel"] }, "MARMoT": { "name": "MARMoT", @@ -17621,7 +17849,7 @@ "name": "MARSS", "version": "3.11.9", "sha256": "0iipvlf6franhvbpg5c7wdnyzl9wl27xhnl1k66mi9m8ihjcczrm", - "depends": ["generics", "KFAS", "mvtnorm", "nlme"] + "depends": ["KFAS", "generics", "mvtnorm", "nlme"] }, "MARSSVRhybrid": { "name": "MARSSVRhybrid", @@ -17633,7 +17861,7 @@ "name": "MARVEL", "version": "1.4.0", "sha256": "1zsgj3dbqpfjv2x6xpp75n9jxf04svqffiy9gxlbxkns3clwqz5i", - "depends": ["ggplot2", "Matrix", "plyr", "scales"] + "depends": ["Matrix", "ggplot2", "plyr", "scales"] }, "MASS": { "name": "MASS", @@ -17645,7 +17873,7 @@ "name": "MASSExtra", "version": "1.2.2", "sha256": "0agr8kf7hh7mjpa98y486bql9wxjwif9f03wz468srzz8jjin39h", - "depends": ["demoKde", "MASS"] + "depends": ["MASS", "demoKde"] }, "MASSTIMATE": { "name": "MASSTIMATE", @@ -17669,13 +17897,13 @@ "name": "MAVE", "version": "1.3.11", "sha256": "01n204bxabbm8pcpayy2s0jvhg73r5cv0026lb3vbk0m40z02kcz", - "depends": ["mda", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mda"] }, "MAZE": { "name": "MAZE", "version": "0.0.2", "sha256": "01vxglgfn82m8avsq6s144gmwclw08arzfrb8lwlcynr62ifzaim", - "depends": ["doParallel", "flexmix", "foreach", "MASS", "numDeriv", "pracma", "Rcpp"] + "depends": ["MASS", "Rcpp", "doParallel", "flexmix", "foreach", "numDeriv", "pracma"] }, "MAd": { "name": "MAd", @@ -17709,27 +17937,27 @@ }, "MBBEFDLite": { "name": "MBBEFDLite", - "version": "0.0.2", - "sha256": "0bq7h2jfnqiylmy9ji5k4r3v76qbxpd5wdjck18fs4vjfxapwplp", + "version": "0.0.4", + "sha256": "1cczc45gw0ksisagjhyjf7zck00qqpdpa02w2wkbdx8bhvllkl62", "depends": [] }, "MBC": { "name": "MBC", "version": "0.10-6", "sha256": "1680lnzga21qk5yddrciiaifxkkb9kk744m9fbj0hg5xw6v9dxic", - "depends": ["energy", "FNN", "Matrix"] + "depends": ["FNN", "Matrix", "energy"] }, "MBCbook": { "name": "MBCbook", "version": "0.1.2", "sha256": "0av7mswr1l02jkjpmh780phjgwjazqzyl07hkb282ba2h95dwlwx", - "depends": ["MASS", "mclust", "mvtnorm", "Rmixmod"] + "depends": ["MASS", "Rmixmod", "mclust", "mvtnorm"] }, "MBESS": { "name": "MBESS", "version": "4.9.3", "sha256": "05ph8dwigwn0c4qg8smqhsjijvsvfawbzvm74mqpasi8qifz8nd3", - "depends": ["boot", "lavaan", "MASS", "mnormt", "nlme", "OpenMx", "sem", "semTools"] + "depends": ["MASS", "OpenMx", "boot", "lavaan", "mnormt", "nlme", "sem", "semTools"] }, "MBHdesign": { "name": "MBHdesign", @@ -17741,19 +17969,19 @@ "name": "MBMethPred", "version": "0.1.4.2", "sha256": "0qpflcydkf2k8a7kqklvp7mskppviqkffkr98rfsklk8iqf8x9c9", - "depends": ["caret", "caTools", "class", "dplyr", "e1071", "ggplot2", "keras", "MASS", "pROC", "randomForest", "readr", "reshape2", "reticulate", "rgl", "Rtsne", "SNFtool", "stringr", "tensorflow", "xgboost"] + "depends": ["MASS", "Rtsne", "SNFtool", "caTools", "caret", "class", "dplyr", "e1071", "ggplot2", "keras", "pROC", "randomForest", "readr", "reshape2", "reticulate", "rgl", "stringr", "tensorflow", "xgboost"] }, "MBNMAdose": { "name": "MBNMAdose", "version": "0.4.3", "sha256": "1dqh7z6wpnryl9djfsacbdm4b4my08kh4l63vd31xs742sywv6i0", - "depends": ["checkmate", "dplyr", "igraph", "magrittr", "R2jags", "Rdpack", "reshape2", "rjags", "scales"] + "depends": ["R2jags", "Rdpack", "checkmate", "dplyr", "igraph", "magrittr", "reshape2", "rjags", "scales"] }, "MBNMAtime": { "name": "MBNMAtime", "version": "0.2.4", "sha256": "1ny438dy62zrafyf7nng2hq5v311l1zc5xd39452fgq6ij0rnrni", - "depends": ["checkmate", "dplyr", "gridExtra", "knitr", "magrittr", "R2jags", "Rdpack", "reshape2", "rjags"] + "depends": ["R2jags", "Rdpack", "checkmate", "dplyr", "gridExtra", "knitr", "magrittr", "reshape2", "rjags"] }, "MBSGS": { "name": "MBSGS", @@ -17777,7 +18005,7 @@ "name": "MCARtest", "version": "1.2.1", "sha256": "0vcw8ysxkv2ajiv44cf6pf8dgn6bmjzs01fsdijs29ky9467alw5", - "depends": ["copula", "Epi", "gtools", "highs", "lpSolve", "MASS", "Matrix", "missMethods", "misty", "norm", "pracma", "rcdd", "Rcpp", "Rcsdp", "Rdpack"] + "depends": ["Epi", "MASS", "Matrix", "Rcpp", "Rcsdp", "Rdpack", "copula", "gtools", "highs", "lpSolve", "missMethods", "misty", "norm", "pracma", "rcdd"] }, "MCAvariants": { "name": "MCAvariants", @@ -17795,13 +18023,13 @@ "name": "MCCM", "version": "0.1.0", "sha256": "1iyd81smamxxy97gzb7jzxkys94ql9nchik3aszkd91zicixd12k", - "depends": ["lavaan", "MASS", "mvtnorm", "polycor"] + "depends": ["MASS", "lavaan", "mvtnorm", "polycor"] }, "MCDA": { "name": "MCDA", "version": "0.1.0", "sha256": "060mqk1cyxh2v68dr8533zr4k3wkz2f4k22400xgj40rwgj9a355", - "depends": ["combinat", "ggplot2", "glpkAPI", "plyr", "RColorBrewer", "Rglpk", "triangle"] + "depends": ["RColorBrewer", "Rglpk", "combinat", "ggplot2", "glpkAPI", "plyr", "triangle"] }, "MCI": { "name": "MCI", @@ -17831,13 +18059,13 @@ "name": "MCMC.OTU", "version": "1.0.10", "sha256": "1h1b0lw7d96q47sgq3px8j6rbkyhxhykm1c891px89khgg6hnszc", - "depends": ["coda", "ggplot2", "MCMCglmm"] + "depends": ["MCMCglmm", "coda", "ggplot2"] }, "MCMC_qpcr": { "name": "MCMC.qpcr", "version": "1.2.4", "sha256": "0v0d43wnq3swbrcsbg9qmwkmk4s50grd6cik4ng5baj2i6i4hd2n", - "depends": ["coda", "ggplot2", "MCMCglmm"] + "depends": ["MCMCglmm", "coda", "ggplot2"] }, "MCMC4Extremes": { "name": "MCMC4Extremes", @@ -17849,19 +18077,19 @@ "name": "MCMCglmm", "version": "2.36", "sha256": "1wca9x5c9x88cryj1pkhl73chmnbc1653j08faz7lp03z2mdkzv6", - "depends": ["ape", "coda", "corpcor", "cubature", "Matrix", "tensorA"] + "depends": ["Matrix", "ape", "coda", "corpcor", "cubature", "tensorA"] }, "MCMCpack": { "name": "MCMCpack", "version": "1.7-0", "sha256": "1vsx0hs8v0928lhkf2jhwc2cwq7bdb5iciibkbfc2zh123bp6q44", - "depends": ["coda", "lattice", "MASS", "mcmc", "quantreg"] + "depends": ["MASS", "coda", "lattice", "mcmc", "quantreg"] }, "MCMCprecision": { "name": "MCMCprecision", "version": "0.4.0", "sha256": "0r0qchiv61sk3drrb0rhwsk55gci4w343hd2gsvclrlyb8r9qhaf", - "depends": ["combinat", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "combinat"] }, "MCMCtreeR": { "name": "MCMCtreeR", @@ -17885,7 +18113,7 @@ "name": "MCPAN", "version": "1.1-21", "sha256": "0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51", - "depends": ["magic", "MCMCpack", "multcomp", "mvtnorm", "plyr"] + "depends": ["MCMCpack", "magic", "multcomp", "mvtnorm", "plyr"] }, "MCPMod": { "name": "MCPMod", @@ -17897,7 +18125,7 @@ "name": "MCPModBC", "version": "1.1", "sha256": "0gzcxn3pf86k32ccvbsh4g5awcxcnsr5c48lkyrpqgwr0k3g0sjs", - "depends": ["doParallel", "doRNG", "DoseFinding", "dplyr", "foreach", "nleqslv", "rlang", "survival"] + "depends": ["DoseFinding", "doParallel", "doRNG", "dplyr", "foreach", "nleqslv", "rlang", "survival"] }, "MCPModGeneral": { "name": "MCPModGeneral", @@ -17909,13 +18137,13 @@ "name": "MCPModPack", "version": "0.5", "sha256": "00s5jx0affbphrl61i9x7vpccjbgnwskc4ly7kg7xff58i96fkri", - "depends": ["devEMF", "flextable", "mvtnorm", "officer", "Rcpp", "RcppEigen", "RcppNumerical", "shiny", "shinydashboard"] + "depends": ["Rcpp", "RcppEigen", "RcppNumerical", "devEMF", "flextable", "mvtnorm", "officer", "shiny", "shinydashboard"] }, "MCPtests": { "name": "MCPtests", "version": "1.0.1", "sha256": "1lzlvzw60fb0mllbl0dx8s30zigzbl9shjas629syb9yw55ypxa2", - "depends": ["doParallel", "foreach", "SMR", "writexl", "xtable"] + "depends": ["SMR", "doParallel", "foreach", "writexl", "xtable"] }, "MCS": { "name": "MCS", @@ -17945,13 +18173,13 @@ "name": "MDBED", "version": "1.0.0", "sha256": "1r3sizb2mqd4pqjy25krwmsjfkr6cl7lkd8db5jn3hgxx3qh6sgc", - "depends": ["doParallel", "foreach", "ggplot2", "lattice", "orthopolynom", "psych", "Rdpack"] + "depends": ["Rdpack", "doParallel", "foreach", "ggplot2", "lattice", "orthopolynom", "psych"] }, "MDEI": { "name": "MDEI", "version": "1.0", "sha256": "1bj9cp73lyj2dzcycf5a196a3d8swblhxs4qwsyc7vmy4pwpxq43", - "depends": ["MASS", "ranger", "Rcpp", "RcppArmadillo", "splines2"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ranger", "splines2"] }, "MDFS": { "name": "MDFS", @@ -17963,19 +18191,19 @@ "name": "MDMA", "version": "1.1.0", "sha256": "0lfn44p18jm6q1ci7m9r79jhfdd3x07489b7nadksn59xsianvaw", - "depends": ["car", "MASS"] + "depends": ["MASS", "car"] }, "MDMAPR": { "name": "MDMAPR", "version": "0.2.3", "sha256": "0w2n6qrjvyzf2wc1yw8a8k027g3y3w2k0z6wkwnj1p8q5zg24c66", - "depends": ["berryFunctions", "bslib", "DBI", "dplyr", "DT", "ggplot2", "htmltools", "htmlwidgets", "leaflet", "leaflet_extras", "plotly", "reactable", "readxl", "RMySQL", "shiny", "shinydashboard", "shinyjs", "shinyWidgets", "writexl", "xfun"] + "depends": ["DBI", "DT", "RMySQL", "berryFunctions", "bslib", "dplyr", "ggplot2", "htmltools", "htmlwidgets", "leaflet", "leaflet_extras", "plotly", "reactable", "readxl", "shiny", "shinyWidgets", "shinydashboard", "shinyjs", "writexl", "xfun"] }, "MDMR": { "name": "MDMR", "version": "0.5.1", "sha256": "1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x", - "depends": ["car", "CompQuadForm", "lme4"] + "depends": ["CompQuadForm", "car", "lme4"] }, "MDOLS": { "name": "MDOLS", @@ -17987,7 +18215,7 @@ "name": "MDPtoolbox", "version": "4.0.3", "sha256": "0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc", - "depends": ["linprog", "Matrix"] + "depends": ["Matrix", "linprog"] }, "MDSMap": { "name": "MDSMap", @@ -17999,7 +18227,7 @@ "name": "MDSPCAShiny", "version": "0.1.0", "sha256": "0qsjx4v9j5p5a7h1g0xk4j5ib1mdrjsy84bglnjdxr9rpqg2m7n5", - "depends": ["dplyr", "MASS", "psych", "rmarkdown", "shiny"] + "depends": ["MASS", "dplyr", "psych", "rmarkdown", "shiny"] }, "MDSS": { "name": "MDSS", @@ -18017,7 +18245,7 @@ "name": "MDplot", "version": "1.0.1", "sha256": "1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9", - "depends": ["gplots", "gtools", "MASS", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "gplots", "gtools"] }, "MED": { "name": "MED", @@ -18029,7 +18257,7 @@ "name": "MEDseq", "version": "1.4.1", "sha256": "1w4jgy3fxwmk87r8kc4a6rx20salsk06qxxgx2jd3d22rvrj8crd", - "depends": ["cluster", "matrixStats", "nnet", "seriation", "stringdist", "TraMineR", "WeightedCluster"] + "depends": ["TraMineR", "WeightedCluster", "cluster", "matrixStats", "nnet", "seriation", "stringdist"] }, "MEFM": { "name": "MEFM", @@ -18041,7 +18269,7 @@ "name": "MEGENA", "version": "1.3.7", "sha256": "0cr10pmj1n831scz5kgaq3nkglr3imwgc62cxng2dvdxr9991g21", - "depends": ["BH", "cluster", "doParallel", "foreach", "fpc", "ggplot2", "ggraph", "ggrepel", "igraph", "Matrix", "Rcpp", "reshape"] + "depends": ["BH", "Matrix", "Rcpp", "cluster", "doParallel", "foreach", "fpc", "ggplot2", "ggraph", "ggrepel", "igraph", "reshape"] }, "MEMSS": { "name": "MEMSS", @@ -18065,13 +18293,13 @@ "name": "MESS", "version": "0.5.12", "sha256": "1xyw04glhpgdcc3p96yvm346l62lsq37ml6lv59ap2ksws9pkq21", - "depends": ["clipr", "geeM", "geepack", "ggformula", "ggplot2", "glmnet", "kinship2", "MASS", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "clipr", "geeM", "geepack", "ggformula", "ggplot2", "glmnet", "kinship2", "mvtnorm"] }, "MEclustnet": { "name": "MEclustnet", "version": "1.2.2", "sha256": "0rs58dafxngk2lkq14cy14ayjwgnz1gmi12jmi4z74sdj0b3h0gw", - "depends": ["e1071", "ellipse", "latentnet", "MASS", "mvtnorm", "nnet", "vegan"] + "depends": ["MASS", "e1071", "ellipse", "latentnet", "mvtnorm", "nnet", "vegan"] }, "MF_beta4": { "name": "MF.beta4", @@ -18081,8 +18309,8 @@ }, "MFAg": { "name": "MFAg", - "version": "1.9", - "sha256": "008krza4lhbv641sn0wlf9gl66n8x6c9d8404m76dsgdsr118c1a", + "version": "2.0", + "sha256": "1lciq1drbd2p71k1svn4a4q7p0j3am9nsd4nmvmwikpihyqswgfv", "depends": [] }, "MFDFA": { @@ -18101,13 +18329,13 @@ "name": "MFPCA", "version": "1.3-10", "sha256": "0qpmy9cxskz4ii3qa5kvrdka4gbvlnch2blis6jjr4vic86a5mgi", - "depends": ["abind", "foreach", "funData", "irlba", "Matrix", "mgcv", "plyr"] + "depends": ["Matrix", "abind", "foreach", "funData", "irlba", "mgcv", "plyr"] }, "MFSIS": { "name": "MFSIS", "version": "0.2.1", "sha256": "02bwnsyy5jrjmh50rd2cql8k9djkw6r0vi9rakfp86n853ir73fj", - "depends": ["Ball", "cli", "crayon", "doParallel", "dr", "foreach", "MASS", "reticulate", "survival"] + "depends": ["Ball", "MASS", "cli", "crayon", "doParallel", "dr", "foreach", "reticulate", "survival"] }, "MFT": { "name": "MFT", @@ -18137,7 +18365,7 @@ "name": "MGDrivE2", "version": "2.1.0", "sha256": "1n7kmn65v6fb372jyqcsqnn01xvwyascqn881avd2iclrajr6h7p", - "depends": ["deSolve", "Matrix", "statmod"] + "depends": ["Matrix", "deSolve", "statmod"] }, "MGL": { "name": "MGL", @@ -18155,7 +18383,7 @@ "name": "MGMM", "version": "1.0.1.1", "sha256": "090qzgy8fdi3asri8kyin52whf3w02yi9713gawbrl8gdiqp4l0b", - "depends": ["cluster", "mvnfast", "plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "cluster", "mvnfast", "plyr"] }, "MGMS2": { "name": "MGMS2", @@ -18185,7 +18413,7 @@ "name": "MHD", "version": "0.1.2", "sha256": "0ghl1ah8b1k1czj01dfqms2k2gvzp09mn3qrl8qv3q3mwa8xs4i8", - "depends": ["distory", "manifold", "nloptr", "plyr", "Rcpp"] + "depends": ["Rcpp", "distory", "manifold", "nloptr", "plyr"] }, "MHDA": { "name": "MHDA", @@ -18213,9 +18441,9 @@ }, "MIAmaxent": { "name": "MIAmaxent", - "version": "1.2.0", - "sha256": "0r4q1735f7apfj0jz4f52ra7sisbkkkk2n6i0kii3q64sx2h3xbj", - "depends": ["dplyr", "e1071", "raster", "rlang"] + "version": "1.3.0", + "sha256": "0xnl21d1jybrff711ndij71ihfarjq5lwpw26frfsni2k4wlbwfy", + "depends": ["dplyr", "e1071", "rlang", "terra"] }, "MICsplines": { "name": "MICsplines", @@ -18245,7 +18473,7 @@ "name": "MIIVsem", "version": "0.5.8", "sha256": "1qb1xrxhgj6b0l24spbp80f0rm8v41bqsdachqjhsacq2lgga259", - "depends": ["boot", "car", "lavaan", "Matrix", "numDeriv"] + "depends": ["Matrix", "boot", "car", "lavaan", "numDeriv"] }, "MIMER": { "name": "MIMER", @@ -18257,7 +18485,7 @@ "name": "MIMSunit", "version": "0.11.2", "sha256": "1i0sadm4gh8yynnihhyp0lm37dq7qm7dmkl28jzdb5knls8nhcpz", - "depends": ["caTools", "dplyr", "dygraphs", "ggplot2", "lubridate", "magrittr", "plyr", "R_utils", "RColorBrewer", "readr", "shiny", "signal", "stringr", "tibble", "xts"] + "depends": ["RColorBrewer", "R_utils", "caTools", "dplyr", "dygraphs", "ggplot2", "lubridate", "magrittr", "plyr", "readr", "shiny", "signal", "stringr", "tibble", "xts"] }, "MINTplates": { "name": "MINTplates", @@ -18269,7 +18497,7 @@ "name": "MIRES", "version": "0.1.0", "sha256": "17k6f73qx85klhhn247nr6h7sinpabq9crlc5ag7qm6z7k6mr370", - "depends": ["BH", "cubature", "dirichletprocess", "Formula", "HDInterval", "logspline", "mvtnorm", "nlme", "pracma", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "truncnorm"] + "depends": ["BH", "Formula", "HDInterval", "Rcpp", "RcppEigen", "StanHeaders", "cubature", "dirichletprocess", "logspline", "mvtnorm", "nlme", "pracma", "rstan", "rstantools", "truncnorm"] }, "MIXFIM": { "name": "MIXFIM", @@ -18281,7 +18509,7 @@ "name": "MJMbamlss", "version": "0.1.0", "sha256": "03alz38375lks1597646cp5xcfc9vivz3bbz7gwniljn2vznrcfq", - "depends": ["bamlss", "coda", "fdapace", "foreach", "funData", "gamm4", "Matrix", "MFPCA", "mgcv", "mvtnorm", "Rcpp", "RcppEigen", "refund", "sparseFLMM", "statmod", "zoo"] + "depends": ["MFPCA", "Matrix", "Rcpp", "RcppEigen", "bamlss", "coda", "fdapace", "foreach", "funData", "gamm4", "mgcv", "mvtnorm", "refund", "sparseFLMM", "statmod", "zoo"] }, "MKLE": { "name": "MKLE", @@ -18317,25 +18545,25 @@ "name": "MKinfer", "version": "1.2", "sha256": "10fy49b5bprbc30zrgz1y74pp480x3avrk9pig6mj9gg6fci207p", - "depends": ["arrangements", "boot", "exactRankTests", "ggplot2", "miceadds", "MKdescr", "nlme"] + "depends": ["MKdescr", "arrangements", "boot", "exactRankTests", "ggplot2", "miceadds", "nlme"] }, "MKmisc": { "name": "MKmisc", "version": "1.9", "sha256": "09kdwsfx5w3q88jbnxbaxzbzyx9fhhphqqaxn5qghhh1z2vpmy93", - "depends": ["ggplot2", "limma", "RColorBrewer", "robustbase", "scales"] + "depends": ["RColorBrewer", "ggplot2", "limma", "robustbase", "scales"] }, "MKomics": { "name": "MKomics", "version": "0.7", "sha256": "0ck8i7ip12bb6wilmwhdrbdmf56ymm3rp6973lr1p4bc2m2kvhif", - "depends": ["circlize", "ComplexHeatmap", "limma", "RColorBrewer", "robustbase"] + "depends": ["ComplexHeatmap", "RColorBrewer", "circlize", "limma", "robustbase"] }, "MKpower": { "name": "MKpower", "version": "0.9", "sha256": "1q04cs2qrjivyiig8nz3s8fl9b4g0smj390vb8jy67p9rq4nhjjz", - "depends": ["coin", "ggplot2", "matrixTests", "MKdescr", "MKinfer", "mvtnorm", "qqplotr"] + "depends": ["MKdescr", "MKinfer", "coin", "ggplot2", "matrixTests", "mvtnorm", "qqplotr"] }, "ML_MSBD": { "name": "ML.MSBD", @@ -18353,7 +18581,7 @@ "name": "MLCIRTwithin", "version": "2.1.1", "sha256": "1x0xmka7kkbjnh3yv4zxxyl17cpmf0rb9hxmdl1srb6ijld4np1b", - "depends": ["limSolve", "MASS", "MultiLCIRT"] + "depends": ["MASS", "MultiLCIRT", "limSolve"] }, "MLCM": { "name": "MLCM", @@ -18365,7 +18593,7 @@ "name": "MLCOPULA", "version": "1.0.0", "sha256": "1addgypksr3hrhzrj9ypaa2w7vgscrqlrfkgx7n0rc7drm827wix", - "depends": ["copula", "GRIDCOPULA", "igraph", "kde1d", "pracma", "TSP"] + "depends": ["GRIDCOPULA", "TSP", "copula", "igraph", "kde1d", "pracma"] }, "MLDS": { "name": "MLDS", @@ -18377,13 +18605,19 @@ "name": "MLDataR", "version": "1.0.1", "sha256": "0sbm79hpgxiqnqjyr5n88rhs29lkp17czz9jmhd2d5x97ncpqw9f", - "depends": ["caret", "ConfusionTableR", "dplyr", "ggplot2", "OddsPlotty", "parsnip", "ranger", "recipes", "rsample", "varhandle", "workflows"] + "depends": ["ConfusionTableR", "OddsPlotty", "caret", "dplyr", "ggplot2", "parsnip", "ranger", "recipes", "rsample", "varhandle", "workflows"] + }, + "MLE": { + "name": "MLE", + "version": "1.0", + "sha256": "0z5ny5lcng03rrpd6mjynxgvi3rx6pc6cm6kpv2dn89lzysv3r4r", + "depends": ["BGFD", "Compositional", "Directional", "MN", "Rfast", "Rfast2", "bivpois", "geppe", "gp", "skellam"] }, "MLEce": { "name": "MLEce", "version": "2.1.0", "sha256": "190i2if8hgwqlznhls780vpkwprfmnsr9jm6zdsa8av0gh6kldzh", - "depends": ["ggplot2", "LaplacesDemon", "mvtnorm", "nleqslv", "reshape", "sirt"] + "depends": ["LaplacesDemon", "ggplot2", "mvtnorm", "nleqslv", "reshape", "sirt"] }, "MLEcens": { "name": "MLEcens", @@ -18401,7 +18635,7 @@ "name": "MLGL", "version": "1.0.0", "sha256": "1vn9r867mj6g407ca2ncd1f2c3x83jcdllyxfalm3962xgwrg08m", - "depends": ["FactoMineR", "fastcluster", "gglasso", "MASS", "Matrix", "parallelDist"] + "depends": ["FactoMineR", "MASS", "Matrix", "fastcluster", "gglasso", "parallelDist"] }, "MLGdata": { "name": "MLGdata", @@ -18425,7 +18659,7 @@ "name": "MLMOI", "version": "0.1.2", "sha256": "1j85syszcsv0v30dvsq5rsdkaz1yj71hsrk53cw5k3m89229wzk1", - "depends": ["openxlsx", "Rdpack", "Rmpfr"] + "depends": ["Rdpack", "Rmpfr", "openxlsx"] }, "MLModelSelection": { "name": "MLModelSelection", @@ -18437,7 +18671,7 @@ "name": "MLMusingR", "version": "0.3.2", "sha256": "0ra3r9qrjv6pl36c0imvwzkkm12jk0xpm60n08siys3pj57ljh8z", - "depends": ["broom", "dplyr", "generics", "lme4", "magrittr", "Matrix", "nlme", "performance", "tibble"] + "depends": ["Matrix", "broom", "dplyr", "generics", "lme4", "magrittr", "nlme", "performance", "tibble"] }, "MLPUGS": { "name": "MLPUGS", @@ -18449,13 +18683,13 @@ "name": "MLVSBM", "version": "0.2.4", "sha256": "1jsaas7crdc3df790c279a5qr8iw63whmkijs86s1y6gyz4qk9vf", - "depends": ["ape", "blockmodels", "cluster", "magrittr", "R6"] + "depends": ["R6", "ape", "blockmodels", "cluster", "magrittr"] }, "MLZ": { "name": "MLZ", "version": "0.1.4", "sha256": "0kvwv13gklilpmqrc939lm1npyvmg8hrxy8m8vfpvrc5jgli49mx", - "depends": ["dplyr", "ggplot2", "gplots", "RcppEigen", "reshape2", "TMB"] + "depends": ["RcppEigen", "TMB", "dplyr", "ggplot2", "gplots", "reshape2"] }, "MLeval": { "name": "MLeval", @@ -18479,7 +18713,7 @@ "name": "MM", "version": "1.6-8", "sha256": "04fr8vxjc7kgpxrlk7q5ibad00ff8fafl14l36snhbszv0zv4n8k", - "depends": ["abind", "magic", "mathjaxr", "Oarray", "partitions", "quadform"] + "depends": ["Oarray", "abind", "magic", "mathjaxr", "partitions", "quadform"] }, "MM2Sdata": { "name": "MM2Sdata", @@ -18491,7 +18725,7 @@ "name": "MM4LMM", "version": "3.0.2", "sha256": "02a553pncv7q0zczy6rvj4avjpryv01n2mhr9cr0ir7607k1jllx", - "depends": ["corpcor", "dplyr", "MASS", "Matrix", "purrr", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "corpcor", "dplyr", "purrr"] }, "MMAC": { "name": "MMAC", @@ -18515,7 +18749,7 @@ "name": "MMDCopula", "version": "0.2.1", "sha256": "10326dnhmscb0dvgyrgz5l1z1wdf9g5xb6s4rlivy7b3zkgq3ii1", - "depends": ["cubature", "pbapply", "randtoolbox", "VineCopula", "wdm"] + "depends": ["VineCopula", "cubature", "pbapply", "randtoolbox", "wdm"] }, "MMDai": { "name": "MMDai", @@ -18527,13 +18761,13 @@ "name": "MMDvariance", "version": "0.0.9", "sha256": "1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi", - "depends": ["Biobase", "lawstat", "MASS"] + "depends": ["Biobase", "MASS", "lawstat"] }, "MMINP": { "name": "MMINP", "version": "0.1.0", "sha256": "0qf5b59b878k7kf5iz6zxg1291pbbq8a1jrsax5bxfrdpq7ili0l", - "depends": ["magrittr", "OmicsPLS"] + "depends": ["OmicsPLS", "magrittr"] }, "MMLR": { "name": "MMLR", @@ -18545,7 +18779,7 @@ "name": "MMOC", "version": "0.1.1.0", "sha256": "1vk2rrngv891g8gcqqn8yyca8rkqfz786amx6g900ph410smyy1s", - "depends": ["igraph", "MASS", "Spectrum"] + "depends": ["MASS", "Spectrum", "igraph"] }, "MMRcaseselection": { "name": "MMRcaseselection", @@ -18557,7 +18791,7 @@ "name": "MMVBVS", "version": "0.8.0", "sha256": "08nkhrf62yywpm0nw22pqzlcm72sf4zq44640a7pf57bbzm38ccy", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "reshape", "reshape2", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "reshape", "reshape2", "rlang"] }, "MMWRweek": { "name": "MMWRweek", @@ -18569,7 +18803,7 @@ "name": "MMeM", "version": "0.1.1", "sha256": "1cig085h2jvrpb904wglwvhvds3sn58wpbl081wcwvzipfa8y37s", - "depends": ["jointDiag", "lme4", "MASS", "Matrix", "matrixcalc", "psych", "stringr"] + "depends": ["MASS", "Matrix", "jointDiag", "lme4", "matrixcalc", "psych", "stringr"] }, "MN": { "name": "MN", @@ -18605,19 +18839,19 @@ "name": "MNM", "version": "1.0-4", "sha256": "1s5fn1h10swl003pq0sb08i38zh951n4hpw2szf8akw1lawrzxak", - "depends": ["ellipse", "ICS", "ICSNP", "SpatialNP"] + "depends": ["ICS", "ICSNP", "SpatialNP", "ellipse"] }, "MNP": { "name": "MNP", - "version": "3.1-4", - "sha256": "1mxfw9b3cxs5bjnzdwc7da8fn00iwf9brzdl938d47pdi074a4s9", + "version": "3.1-5", + "sha256": "1rvkhx90hac6spcgzmrs62wvcci08accjlngw9jj4snawc7zyxvs", "depends": [] }, "MNS": { "name": "MNS", "version": "1.0", "sha256": "0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb", - "depends": ["doParallel", "glmnet", "igraph", "MASS", "mvtnorm"] + "depends": ["MASS", "doParallel", "glmnet", "igraph", "mvtnorm"] }, "MOCCA": { "name": "MOCCA", @@ -18629,7 +18863,7 @@ "name": "MOCHA", "version": "1.1.0", "sha256": "1v0pvpzc635bz63ywzpb39h7f6qrk3yvxf21i13y5abhmyjppdmi", - "depends": ["AnnotationDbi", "assertthat", "BiocGenerics", "BSgenome", "data_table", "dplyr", "ensembldb", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "ggbio", "ggplot2", "ggrepel", "ggridges", "IRanges", "lifecycle", "magrittr", "matrixStats", "MultiAssayExperiment", "pbapply", "plyranges", "qvalue", "RaggedExperiment", "rlang", "S4Vectors", "scales", "stringr", "SummarizedExperiment", "tidyr", "tidyselect", "wCorr"] + "depends": ["AnnotationDbi", "BSgenome", "BiocGenerics", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "MultiAssayExperiment", "RaggedExperiment", "S4Vectors", "SummarizedExperiment", "assertthat", "data_table", "dplyr", "ensembldb", "ggbio", "ggplot2", "ggrepel", "ggridges", "lifecycle", "magrittr", "matrixStats", "pbapply", "plyranges", "qvalue", "rlang", "scales", "stringr", "tidyr", "tidyselect", "wCorr"] }, "MODISTools": { "name": "MODISTools", @@ -18641,7 +18875,7 @@ "name": "MOEADr", "version": "1.1.3", "sha256": "19x7km2bpq0srm2lyafg3jcc4khwv077kjsqhhbgkv7r4c7xl6id", - "depends": ["assertthat", "FNN"] + "depends": ["FNN", "assertthat"] }, "MOFAT": { "name": "MOFAT", @@ -18665,7 +18899,7 @@ "name": "MOSS", "version": "0.2.2", "sha256": "0gjsyv74hhjknlnplc8157mmypnfy1yjrs400pz0p4744k5c8c7s", - "depends": ["cluster", "dbscan", "Rtsne"] + "depends": ["Rtsne", "cluster", "dbscan"] }, "MOST": { "name": "MOST", @@ -18677,7 +18911,7 @@ "name": "MOTE", "version": "1.0.2", "sha256": "17y2l2rmw7fhvknyh5z09i7hd8nhamx12g00rcymp75gqkz9lzc7", - "depends": ["ez", "MBESS", "reshape"] + "depends": ["MBESS", "ez", "reshape"] }, "MPBoost": { "name": "MPBoost", @@ -18691,12 +18925,6 @@ "sha256": "1l55q09lliv0y4q1hc0jgzls47wkmsfag6b4iq5y6wrllr5wq7sa", "depends": [] }, - "MPCR": { - "name": "MPCR", - "version": "1.1.2", - "sha256": "0hq6df8rz7hi1s4kpcxlx21kppn70fjki8wfy6gi8kna8bmayyf7", - "depends": ["Rcpp"] - }, "MPDiR": { "name": "MPDiR", "version": "0.2", @@ -18731,24 +18959,24 @@ "name": "MPSEM", "version": "0.4-1", "sha256": "0cq7vyyif7gxywrj420msscjf1aq427g88x8yvxf3a5a6mqapkr8", - "depends": ["ape", "MASS"] + "depends": ["MASS", "ape"] }, "MPTinR": { "name": "MPTinR", "version": "1.14.1", "sha256": "0jywv5kim3vdfq0dfaxjksq8l2i6ny45rn5ibmb7ximwfjm3syp0", - "depends": ["Brobdingnag", "numDeriv", "Rcpp", "RcppEigen"] + "depends": ["Brobdingnag", "Rcpp", "RcppEigen", "numDeriv"] }, "MPTmultiverse": { "name": "MPTmultiverse", "version": "0.4-2", "sha256": "0fjfj8jk0dk1s3jc9rl9kza6gm5pm6dgsqyk0aq7pir2hrsr3qwy", - "depends": ["coda", "dplyr", "ggplot2", "limSolve", "magrittr", "MPTinR", "purrr", "readr", "reshape2", "rlang", "runjags", "tibble", "tidyr", "TreeBUGS"] + "depends": ["MPTinR", "TreeBUGS", "coda", "dplyr", "ggplot2", "limSolve", "magrittr", "purrr", "readr", "reshape2", "rlang", "runjags", "tibble", "tidyr"] }, "MPV": { "name": "MPV", - "version": "1.63", - "sha256": "0nylp38fxk3nabg8apcnb1f45q1z8667vswdzds6nzm2v8a94p5j", + "version": "1.64", + "sha256": "0alvs1jm1qqnswhm62a0ky070dskk6syjsa5bkcssg1zin8xcyhv", "depends": ["KernSmooth", "lattice", "randomForest"] }, "MPsychoR": { @@ -18785,7 +19013,7 @@ "name": "MRFcov", "version": "1.0.39", "sha256": "0vgmm9lwkpfahzlhcyaixh2x9d85rrpxipzsc0wy66j43vgn4jhp", - "depends": ["caret", "dplyr", "ggplot2", "glmnet", "gridExtra", "igraph", "magrittr", "MASS", "Matrix", "mgcv", "pbapply", "plyr", "purrr", "reshape2", "sfsmisc"] + "depends": ["MASS", "Matrix", "caret", "dplyr", "ggplot2", "glmnet", "gridExtra", "igraph", "magrittr", "mgcv", "pbapply", "plyr", "purrr", "reshape2", "sfsmisc"] }, "MRHawkes": { "name": "MRHawkes", @@ -18809,7 +19037,7 @@ "name": "MRPC", "version": "3.1.0", "sha256": "1hsrcqp4yygz2psxj9m2n1z7pivdf82b3rnqc34ripyql5apmikn", - "depends": ["bnlearn", "compositions", "dynamicTreeCut", "fastcluster", "GGally", "graph", "gtools", "Hmisc", "mice", "network", "pcalg", "plyr", "psych", "Rgraphviz", "sna", "WGCNA"] + "depends": ["GGally", "Hmisc", "Rgraphviz", "WGCNA", "bnlearn", "compositions", "dynamicTreeCut", "fastcluster", "graph", "gtools", "mice", "network", "pcalg", "plyr", "psych", "sna"] }, "MRQoL": { "name": "MRQoL", @@ -18827,7 +19055,7 @@ "name": "MRS", "version": "1.2.6", "sha256": "0rw3gmjn35118f1v1i8wa56zmz0cz2qbjahic87ylbyamnfsxz3l", - "depends": ["igraph", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "igraph"] }, "MRTAnalysis": { "name": "MRTAnalysis", @@ -18845,7 +19073,7 @@ "name": "MRTSampleSizeBinary", "version": "0.1.2", "sha256": "1kb88sdhb8pp4mmvz8fy08drslzxj58fh1ycqaa3da6j7s9x65bn", - "depends": ["ggplot2", "Matrix"] + "depends": ["Matrix", "ggplot2"] }, "MRZero": { "name": "MRZero", @@ -18857,7 +19085,7 @@ "name": "MRmediation", "version": "1.0.1", "sha256": "0v0kn6x4fwj35imj1fb2f2024ifb7081z4cwlhjmdxhabcy6xbx7", - "depends": ["fda", "MASS"] + "depends": ["MASS", "fda"] }, "MSBStatsData": { "name": "MSBStatsData", @@ -18869,25 +19097,25 @@ "name": "MSCMT", "version": "1.4.0", "sha256": "1mjm85pxxww6m7mfk8xfwhx65c64k4v6pjpvbasv5jhy49kfjgw4", - "depends": ["ggplot2", "lpSolve", "lpSolveAPI", "Rdpack", "Rglpk"] + "depends": ["Rdpack", "Rglpk", "ggplot2", "lpSolve", "lpSolveAPI"] }, "MSCquartets": { "name": "MSCquartets", - "version": "2.0", - "sha256": "0ahmg7f5ikkihpanl0jbxd4sqmw85m88r789z53iqr4rbp23gdb8", - "depends": ["ape", "doParallel", "foreach", "igraph", "phangorn", "Rcpp", "RcppProgress", "Rdpack", "zipfR"] + "version": "2.0.1", + "sha256": "1d1bgvwz88q2sipqzhiybwflixb45nc1fw9isf7xbhq18msr9vmh", + "depends": ["Rcpp", "RcppProgress", "Rdpack", "ape", "doParallel", "foreach", "igraph", "phangorn", "zipfR"] }, "MSCsimtester": { "name": "MSCsimtester", "version": "1.0.0", "sha256": "0k04fdprwa56vm6n372lipybgq1plhmjbxvp58wqmpgzpnhcxkvd", - "depends": ["ape", "kSamples", "Rdpack"] + "depends": ["Rdpack", "ape", "kSamples"] }, "MSEtool": { "name": "MSEtool", "version": "3.7.1", "sha256": "16m8q5h9ciydlg6gqpvwaxam2q7d327v7z40h7cwc0chh43wjysz", - "depends": ["abind", "dplyr", "ggplot2", "ggrepel", "gridExtra", "Rcpp", "RcppArmadillo", "snowfall"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "dplyr", "ggplot2", "ggrepel", "gridExtra", "snowfall"] }, "MSG": { "name": "MSG", @@ -18899,19 +19127,19 @@ "name": "MSGARCH", "version": "2.51", "sha256": "1n8v9017p8iw9mai3yqh294v7kyj458a6vj9ma20gzd94nhyhlxh", - "depends": ["coda", "expm", "fanplot", "MASS", "numDeriv", "Rcpp", "RcppArmadillo", "zoo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "coda", "expm", "fanplot", "numDeriv", "zoo"] }, "MSGARCHelm": { "name": "MSGARCHelm", "version": "0.1.0", "sha256": "172xpvs98b9ay44ffb8bp9k4zsjzhy92pp7bv3d1j186pqhl13ib", - "depends": ["forecast", "MSGARCH", "nnfor"] + "depends": ["MSGARCH", "forecast", "nnfor"] }, "MSML": { "name": "MSML", "version": "1.0.0.1", "sha256": "0nzn3zys6cbqvzjncdgvlxw00zvg7c2wcnf59yky66chz42c31wd", - "depends": ["r2redux", "R2ROC"] + "depends": ["R2ROC", "r2redux"] }, "MSMwRA": { "name": "MSMwRA", @@ -18947,7 +19175,7 @@ "name": "MSTest", "version": "0.1.2", "sha256": "0ad28aj9pmy9vn6z9fhzvap4cbxafbk09amhgp178hvw9rdp48zf", - "depends": ["foreach", "GA", "GenSA", "nloptr", "numDeriv", "pracma", "pso", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["GA", "GenSA", "Rcpp", "RcppArmadillo", "foreach", "nloptr", "numDeriv", "pracma", "pso", "rlang"] }, "MSbox": { "name": "MSbox", @@ -18959,13 +19187,13 @@ "name": "MSclassifR", "version": "0.3.3", "sha256": "1qn79awr6yiywiz9k1wx6bqml1ssjijg1k2rm4blvlbd26yk5lbr", - "depends": ["car", "caret", "cp4p", "dplyr", "e1071", "fuzzyjoin", "ggplot2", "glmnet", "limma", "MALDIquant", "MALDIquantForeign", "MALDIrppa", "mclust", "metap", "mixOmics", "mltools", "nnet", "performanceEstimation", "randomForest", "reshape2", "statmod", "UBL", "vita", "VSURF", "xgboost"] + "depends": ["MALDIquant", "MALDIquantForeign", "MALDIrppa", "UBL", "VSURF", "car", "caret", "cp4p", "dplyr", "e1071", "fuzzyjoin", "ggplot2", "glmnet", "limma", "mclust", "metap", "mixOmics", "mltools", "nnet", "performanceEstimation", "randomForest", "reshape2", "statmod", "vita", "xgboost"] }, "MSclust": { "name": "MSclust", "version": "1.0.4", "sha256": "1ra9y9njcz21s2p63gisi3vgjjqzdnn9vvp0qfszkvpm0kkl0487", - "depends": ["cluster", "GGally", "ggplot2", "gtools", "Matrix", "mclust", "mnormt", "mvtnorm", "psych"] + "depends": ["GGally", "Matrix", "cluster", "ggplot2", "gtools", "mclust", "mnormt", "mvtnorm", "psych"] }, "MScombine": { "name": "MScombine", @@ -18977,19 +19205,19 @@ "name": "MSiP", "version": "1.3.7", "sha256": "1n8yl5icd3qkpmx2knxsp4g6jvkbg6hl82jxg9apxkx4nmsvkawz", - "depends": ["caret", "dplyr", "e1071", "magrittr", "mice", "plyr", "pROC", "PRROC", "ranger", "tibble", "tidyr"] + "depends": ["PRROC", "caret", "dplyr", "e1071", "magrittr", "mice", "pROC", "plyr", "ranger", "tibble", "tidyr"] }, "MSigSeg": { "name": "MSigSeg", "version": "0.2.0", "sha256": "0675nkv5lqw3y19i6bcqhc1jc9qjmyf0x01224d098kfwl74lxiw", - "depends": ["ggplot2", "ggpubr", "MASS"] + "depends": ["MASS", "ggplot2", "ggpubr"] }, "MSmix": { "name": "MSmix", "version": "1.0.2", "sha256": "10bdzgx21y8xqggj98lv17mb2dv39ay6k0l5mz3dsn44967mv7rm", - "depends": ["BayesMallows", "bmixture", "data_table", "dplyr", "factoextra", "fields", "foreach", "ggbump", "ggplot2", "gmp", "gridExtra", "magrittr", "Rankcluster", "RColorBrewer", "Rcpp", "reshape", "rlang", "scales", "spsUtil"] + "depends": ["BayesMallows", "RColorBrewer", "Rankcluster", "Rcpp", "bmixture", "data_table", "dplyr", "factoextra", "fields", "foreach", "ggbump", "ggplot2", "gmp", "gridExtra", "magrittr", "reshape", "rlang", "scales", "spsUtil"] }, "MSoutcomes": { "name": "MSoutcomes", @@ -19043,13 +19271,13 @@ "name": "MTPS", "version": "1.0.2", "sha256": "0bv81vwswhrs0p3mvsiv5njyq1j5p16y14m3sysnyg8rr98gqy38", - "depends": ["class", "e1071", "glmnet", "MASS", "rpart"] + "depends": ["MASS", "class", "e1071", "glmnet", "rpart"] }, "MTS": { "name": "MTS", "version": "1.2.1", "sha256": "0nc1g5dbg42j0h5xg9psg5kqldp5w87in8ggzliixpsz3cilvry3", - "depends": ["fBasics", "fGarch", "mvtnorm", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "fBasics", "fGarch", "mvtnorm"] }, "MTSYS": { "name": "MTSYS", @@ -19097,7 +19325,7 @@ "name": "MVN", "version": "5.9", "sha256": "014s07nxq014j5hkbd6iwwqykcw8si5sah57gi3n0wb51sv8ip1k", - "depends": ["boot", "car", "energy", "MASS", "moments", "nortest", "plyr", "psych"] + "depends": ["MASS", "boot", "car", "energy", "moments", "nortest", "plyr", "psych"] }, "MVNBayesian": { "name": "MVNBayesian", @@ -19109,13 +19337,13 @@ "name": "MVNtestchar", "version": "1.1.3", "sha256": "0w5008zknrl5r7l4dmj2fbm7vvg2f1wynzf38kabns4j7hb1nmxw", - "depends": ["ggplot2", "Hmisc", "knitr"] + "depends": ["Hmisc", "ggplot2", "knitr"] }, "MVPBT": { "name": "MVPBT", "version": "1.2-1", "sha256": "19i8sgmdndvxiars2za605f3lcxw7cy2ff22n2llkpl5196r3mzl", - "depends": ["mada", "MASS", "metafor", "mvmeta"] + "depends": ["MASS", "mada", "metafor", "mvmeta"] }, "MVQuickGraphs": { "name": "MVQuickGraphs", @@ -19143,14 +19371,14 @@ }, "MVar": { "name": "MVar", - "version": "2.2.1", - "sha256": "0jmbgiw1mvdlkc41mxxk4cjknwh161ahai4gdavdcx66x87l754y", + "version": "2.2.2", + "sha256": "1d1gh8wxwy3pddamhfgiy1l89swi8i9mi5i782cwd3gi2q6w6jf3", "depends": ["MASS"] }, "MVar_pt": { "name": "MVar.pt", - "version": "2.2.1", - "sha256": "00p6n91d28bibf24j3rkql1hp85dy9qag9spi98m6a2v5isp10p3", + "version": "2.2.2", + "sha256": "0095jhb5zfl4nix9n26mb1xdrc4fgi8mvn1l3z4m90mzrk39vsk2", "depends": ["MASS"] }, "MVisAGe": { @@ -19169,25 +19397,25 @@ "name": "MXM", "version": "1.5.5", "sha256": "15r4jnf1l2nrf67xkpvzg2h7yxxhjlkr454n691ssss9z0zpsgcl", - "depends": ["bigmemory", "coxme", "doParallel", "dplyr", "energy", "foreach", "geepack", "Hmisc", "knitr", "lme4", "MASS", "nnet", "ordinal", "quantreg", "relations", "Rfast", "Rfast2", "survival", "visNetwork"] + "depends": ["Hmisc", "MASS", "Rfast", "Rfast2", "bigmemory", "coxme", "doParallel", "dplyr", "energy", "foreach", "geepack", "knitr", "lme4", "nnet", "ordinal", "quantreg", "relations", "survival", "visNetwork"] }, "MaOEA": { "name": "MaOEA", "version": "0.6.2", "sha256": "0s8jvp7821mb6xff8xwnh78mhz4qfrbk4g7sp4dfnm2ii7ah9c6b", - "depends": ["e1071", "gtools", "lhs", "MASS", "nnet", "nsga2R", "pracma", "randtoolbox", "reticulate", "stringr"] + "depends": ["MASS", "e1071", "gtools", "lhs", "nnet", "nsga2R", "pracma", "randtoolbox", "reticulate", "stringr"] }, "MacBehaviour": { "name": "MacBehaviour", - "version": "1.2.2", - "sha256": "0z4d1g4b3fv63r1c4b64aj0lg0dyzyhvjgmj59gpcizl65jg6dw6", - "depends": ["httr", "openxlsx", "rjson"] + "version": "1.2.4", + "sha256": "16jcksyy8wira7i5gpl27fmbq3wzfsyp4v4xqq7r78qi2rv16wgg", + "depends": ["dplyr", "httr", "openxlsx", "rjson"] }, "MachineShop": { "name": "MachineShop", "version": "3.7.0", "sha256": "073v778c7zkpxhhdvqc4hiqlgj5ws9490cqpz22bk659f8f63bav", - "depends": ["abind", "cli", "dials", "foreach", "ggplot2", "kernlab", "magrittr", "Matrix", "nnet", "party", "polspline", "progress", "recipes", "rlang", "rsample", "Rsolnp", "survival", "tibble"] + "depends": ["Matrix", "Rsolnp", "abind", "cli", "dials", "foreach", "ggplot2", "kernlab", "magrittr", "nnet", "party", "polspline", "progress", "recipes", "rlang", "rsample", "survival", "tibble"] }, "MacroZooBenthosWaterA": { "name": "MacroZooBenthosWaterA", @@ -19199,13 +19427,13 @@ "name": "MadanText", "version": "0.1.0", "sha256": "1sz3mwb74yvj5ijmpm7zdwsgyvhs6rs8fpy1mpw538r5jx4xbzg8", - "depends": ["dplyr", "hwordcloud", "lattice", "PersianStemmer", "shiny", "shinythemes", "stopwords", "stringi", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels", "udpipe", "xlsx"] + "depends": ["PersianStemmer", "dplyr", "hwordcloud", "lattice", "shiny", "shinythemes", "stopwords", "stringi", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels", "udpipe", "xlsx"] }, "MadanTextNetwork": { "name": "MadanTextNetwork", "version": "0.1.0", "sha256": "0691pwsgbmy2fmvcf6adqgasrdf70n5g0cgy6663wfavkdx5nni2", - "depends": ["dplyr", "glue", "hwordcloud", "igraph", "lattice", "ngram", "PersianStemmer", "shiny", "shinythemes", "stopwords", "stringi", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels", "udpipe", "visNetwork", "xlsx"] + "depends": ["PersianStemmer", "dplyr", "glue", "hwordcloud", "igraph", "lattice", "ngram", "shiny", "shinythemes", "stopwords", "stringi", "stringr", "textmineR", "tidyr", "tidytext", "tm", "topicmodels", "udpipe", "visNetwork", "xlsx"] }, "Maeswrap": { "name": "Maeswrap", @@ -19215,15 +19443,15 @@ }, "MagmaClustR": { "name": "MagmaClustR", - "version": "1.2.0", - "sha256": "1hbdppqymi4qsacp0f1lpq3042zs5gbpdshmmg3mb2v26badss4h", - "depends": ["broom", "dplyr", "ggplot2", "magrittr", "mvtnorm", "plyr", "purrr", "Rcpp", "rlang", "tibble", "tidyr", "tidyselect"] + "version": "1.2.1", + "sha256": "0gwfb5p5garycnvqsd4l80yqna7y09xs9ffgr2ah6150s9w3r0q0", + "depends": ["Rcpp", "broom", "dplyr", "ggplot2", "magrittr", "mvtnorm", "plyr", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "MainExistingDatasets": { "name": "MainExistingDatasets", "version": "1.0.2", "sha256": "16g741hzckla6amhwa54bhg3l3700sp43p6mijbb5065qnviw5y9", - "depends": ["config", "dplyr", "DT", "glue", "golem", "htmltools", "htmlwidgets", "magrittr", "openxlsx", "pkgload", "processx", "rlang", "sf", "shiny", "spData", "tidyr", "tmap", "tmaptools"] + "depends": ["DT", "config", "dplyr", "glue", "golem", "htmltools", "htmlwidgets", "magrittr", "openxlsx", "pkgload", "processx", "rlang", "sf", "shiny", "spData", "tidyr", "tmap", "tmaptools"] }, "MajKMeans": { "name": "MajKMeans", @@ -19247,7 +19475,7 @@ "name": "ManagedCloudProvider", "version": "1.0.0", "sha256": "0glhx9ylpx2s8mi711gblapw6qnv80nd4wahph65g6ddngvmgv73", - "depends": ["adagio", "DockerParallel", "jsonlite"] + "depends": ["DockerParallel", "adagio", "jsonlite"] }, "MandalaR": { "name": "MandalaR", @@ -19273,12 +19501,6 @@ "sha256": "10knb2gzzsq5dkm7h70qvcw2cx7m7ra00vlkqbs36y6vw2gcjwmn", "depends": [] }, - "MantaID": { - "name": "MantaID", - "version": "1.0.2", - "sha256": "01rc9p4ydq7s2iwqc017ijdbw8w8n0s82f0j69gsl6m5fbqm9a4k", - "depends": ["biomaRt", "caret", "data_table", "dplyr", "ggcorrplot", "ggplot2", "keras", "magrittr", "mlr3", "mlr3tuning", "paradox", "purrr", "RColorBrewer", "reshape2", "scutr", "stringr", "tibble", "tidyr", "tidyselect"] - }, "ManyTests": { "name": "ManyTests", "version": "1.2", @@ -19295,7 +19517,7 @@ "name": "MapGAM", "version": "1.3", "sha256": "09y06fzw8ari3c06fiz8cl067c9frvfnc0zi484brb9nqlaq24rw", - "depends": ["colorspace", "gam", "PBSmapping", "sf", "sp", "survival"] + "depends": ["PBSmapping", "colorspace", "gam", "sf", "sp", "survival"] }, "Mapinguari": { "name": "Mapinguari", @@ -19307,7 +19529,7 @@ "name": "MarZIC", "version": "1.0.0", "sha256": "16f09s5f95jsafd3s8w01vc9i98nlwm3abrwfdhymaallq4kcban", - "depends": ["betareg", "dirmult", "doParallel", "foreach", "mathjaxr", "NlcOptim", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["NlcOptim", "Rcpp", "RcppArmadillo", "betareg", "dirmult", "doParallel", "foreach", "mathjaxr", "pracma"] }, "MareyMap": { "name": "MareyMap", @@ -19319,7 +19541,7 @@ "name": "MargCond", "version": "1.0.0", "sha256": "07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8", - "depends": ["gee", "lme4", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "gee", "lme4"] }, "MarginalMediation": { "name": "MarginalMediation", @@ -19331,7 +19553,7 @@ "name": "MarketMatching", "version": "1.2.1", "sha256": "0ggs8b4zi1q0sqicjp8dzhhbwmdfypbmadajw6wjq0vi1ilylfb0", - "depends": ["Boom", "bsts", "CausalImpact", "doParallel", "dplyr", "dtw", "foreach", "ggplot2", "iterators", "reshape2", "scales", "tidyr", "utf8", "zoo"] + "depends": ["Boom", "CausalImpact", "bsts", "doParallel", "dplyr", "dtw", "foreach", "ggplot2", "iterators", "reshape2", "scales", "tidyr", "utf8", "zoo"] }, "Markovchart": { "name": "Markovchart", @@ -19349,7 +19571,7 @@ "name": "MassWateR", "version": "2.1.4", "sha256": "0hfjddm19r53hig48sfxkkjqib4ip651q2asfgp3639w4akn8pzx", - "depends": ["curl", "dplyr", "flextable", "ggplot2", "ggrepel", "ggspatial", "httr", "lubridate", "prettymapr", "raster", "RColorBrewer", "readxl", "rmarkdown", "sf", "tibble", "tidyr", "units", "writexl"] + "depends": ["RColorBrewer", "curl", "dplyr", "flextable", "ggplot2", "ggrepel", "ggspatial", "httr", "lubridate", "prettymapr", "raster", "readxl", "rmarkdown", "sf", "tibble", "tidyr", "units", "writexl"] }, "Massign": { "name": "Massign", @@ -19373,7 +19595,7 @@ "name": "MatchIt", "version": "4.5.5", "sha256": "17l5b6i4bmg3gjjhzagy451zcv2i5xj4j6zzxgiqf955sgywlfdf", - "depends": ["backports", "chk", "Rcpp", "RcppProgress", "rlang"] + "depends": ["Rcpp", "RcppProgress", "backports", "chk", "rlang"] }, "MatchLinReg": { "name": "MatchLinReg", @@ -19385,7 +19607,7 @@ "name": "MatchThem", "version": "1.2.1", "sha256": "12kaaji3nhqggdfhb3hkydsg66p9qpxh95g5z5sf4wym9ks0qhi3", - "depends": ["MatchIt", "mice", "rlang", "survey", "WeightIt"] + "depends": ["MatchIt", "WeightIt", "mice", "rlang", "survey"] }, "Matching": { "name": "Matching", @@ -19403,7 +19625,7 @@ "name": "MatrixCorrelation", "version": "0.10.0", "sha256": "1na3y1crlj57c1xq9ja3v94cx2dr0myrlx9bxvhhwss3q3r1lgby", - "depends": ["plotrix", "pracma", "progress", "Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "plotrix", "pracma", "progress"] }, "MatrixEQTL": { "name": "MatrixEQTL", @@ -19415,13 +19637,13 @@ "name": "MatrixExtra", "version": "0.1.15", "sha256": "0mp0si5923kfakwxcc08288zyx1nrrrpn9srcwax28vrz46l33z9", - "depends": ["float", "Matrix", "Rcpp", "RhpcBLASctl"] + "depends": ["Matrix", "Rcpp", "RhpcBLASctl", "float"] }, "MatrixLDA": { "name": "MatrixLDA", "version": "0.2", "sha256": "0fixq35gp0fzmin75sfld2ln0zvnjgzrhk3b5yi7wdqzp99200yy", - "depends": ["glasso", "plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glasso", "plyr"] }, "MatrixMixtures": { "name": "MatrixMixtures", @@ -19457,7 +19679,7 @@ "name": "MaximinInfer", "version": "2.0.0", "sha256": "0l4sglb3f7f1na6dbb4rd73sb4kqzlz78sj09f84rbqghjrzbxl0", - "depends": ["CVXR", "glmnet", "intervals", "MASS", "SIHR"] + "depends": ["CVXR", "MASS", "SIHR", "glmnet", "intervals"] }, "MazamaCoreUtils": { "name": "MazamaCoreUtils", @@ -19469,7 +19691,7 @@ "name": "MazamaLocationUtils", "version": "0.4.3", "sha256": "0adzwzykp410d63dxn3izkf7nmpvlxabzzw80d0205gbs3624yrd", - "depends": ["cluster", "dplyr", "geodist", "httr", "jsonlite", "leaflet", "lubridate", "magrittr", "MazamaCoreUtils", "MazamaSpatialUtils", "readr", "rlang", "stringr", "tidygeocoder"] + "depends": ["MazamaCoreUtils", "MazamaSpatialUtils", "cluster", "dplyr", "geodist", "httr", "jsonlite", "leaflet", "lubridate", "magrittr", "readr", "rlang", "stringr", "tidygeocoder"] }, "MazamaRollUtils": { "name": "MazamaRollUtils", @@ -19481,19 +19703,19 @@ "name": "MazamaSpatialPlots", "version": "0.2.0", "sha256": "1i8gqywl2w7zjl1m5qw8vmy7wn44cp8fkiw4m2iwvf4s9q43xjnc", - "depends": ["dplyr", "magrittr", "MazamaCoreUtils", "MazamaSpatialUtils", "rlang", "sf", "tmap"] + "depends": ["MazamaCoreUtils", "MazamaSpatialUtils", "dplyr", "magrittr", "rlang", "sf", "tmap"] }, "MazamaSpatialUtils": { "name": "MazamaSpatialUtils", "version": "0.8.6", "sha256": "18dpnal2rkj2lkrlnr6wn4rc4n2xb7w6g6kywppc9d1qd29b0njk", - "depends": ["countrycode", "dplyr", "magrittr", "MazamaCoreUtils", "rlang", "rmapshaper", "sf", "stringr"] + "depends": ["MazamaCoreUtils", "countrycode", "dplyr", "magrittr", "rlang", "rmapshaper", "sf", "stringr"] }, "MazamaTimeSeries": { "name": "MazamaTimeSeries", "version": "0.3.0", "sha256": "10w8nffv9rls32bj3rfa48l6nyly0238ywqbqwfkvr16i7g63dsb", - "depends": ["dplyr", "geodist", "lubridate", "magrittr", "MazamaCoreUtils", "MazamaRollUtils", "rlang", "stringr"] + "depends": ["MazamaCoreUtils", "MazamaRollUtils", "dplyr", "geodist", "lubridate", "magrittr", "rlang", "stringr"] }, "Mcomp": { "name": "Mcomp", @@ -19529,31 +19751,31 @@ "name": "Mediana", "version": "1.0.8", "sha256": "0j1ikc2iaxl70134v0gijj2i2g0xgjafvn8rc108r9fhm8rpw564", - "depends": ["doParallel", "doRNG", "foreach", "MASS", "mvtnorm", "survival"] + "depends": ["MASS", "doParallel", "doRNG", "foreach", "mvtnorm", "survival"] }, "MedianaDesigner": { "name": "MedianaDesigner", "version": "0.13", "sha256": "07vzfm583gqk0ars4gamyn21lpcsdxx86nkp227i9yk7lyj0r6kp", - "depends": ["devEMF", "doParallel", "flextable", "foreach", "lme4", "lmerTest", "MASS", "mvtnorm", "officer", "pbkrtest", "Rcpp", "RcppEigen", "RcppNumerical", "rootSolve", "shiny", "shinydashboard", "shinyMatrix"] + "depends": ["MASS", "Rcpp", "RcppEigen", "RcppNumerical", "devEMF", "doParallel", "flextable", "foreach", "lme4", "lmerTest", "mvtnorm", "officer", "pbkrtest", "rootSolve", "shiny", "shinyMatrix", "shinydashboard"] }, "Mega2R": { "name": "Mega2R", "version": "1.1.0", "sha256": "05g0r7z6kiy0pgl7cbcc3c0wbf4wbc7fxdbha8sc77m3hqya882l", - "depends": ["AnnotationDbi", "DBI", "famSKATRC", "gdsfmt", "GenomeInfoDb", "kinship2", "pedgene", "Rcpp", "RSQLite", "SKAT"] + "depends": ["AnnotationDbi", "DBI", "GenomeInfoDb", "RSQLite", "Rcpp", "SKAT", "famSKATRC", "gdsfmt", "kinship2", "pedgene"] }, "MendelianRandomization": { "name": "MendelianRandomization", "version": "0.10.0", "sha256": "0g71h1hwvm0ldrklvlliq2ylglb1w7zli0x5sh7z4934h8gyjl88", - "depends": ["ggplot2", "glmnet", "iterpc", "knitr", "Matrix", "numDeriv", "plotly", "quantreg", "Rcpp", "RcppArmadillo", "rjson", "rmarkdown", "robustbase"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "glmnet", "iterpc", "knitr", "numDeriv", "plotly", "quantreg", "rjson", "rmarkdown", "robustbase"] }, "Mercator": { "name": "Mercator", "version": "1.1.4", "sha256": "0wj8bsrj2v4icj0byllaxyqnph3zpx98gvbxhdzy0zamyrfk57ss", - "depends": ["ClassDiscovery", "cluster", "dendextend", "flexmix", "igraph", "KernSmooth", "kohonen", "Polychrome", "Rtsne", "Thresher", "umap"] + "depends": ["ClassDiscovery", "KernSmooth", "Polychrome", "Rtsne", "Thresher", "cluster", "dendextend", "flexmix", "igraph", "kohonen", "umap"] }, "Mestim": { "name": "Mestim", @@ -19565,7 +19787,7 @@ "name": "MetAlyzer", "version": "1.0.0", "sha256": "0b5kznmqq7kda5qan5jyxy5s41y367dmq2fxk7mihjnmn9fp282n", - "depends": ["agricolae", "data_table", "dplyr", "ggplot2", "ggrepel", "openxlsx", "qvalue", "rlang", "S4Vectors", "stringr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["S4Vectors", "SummarizedExperiment", "agricolae", "data_table", "dplyr", "ggplot2", "ggrepel", "openxlsx", "qvalue", "rlang", "stringr", "tibble", "tidyr"] }, "MetBrewer": { "name": "MetBrewer", @@ -19577,13 +19799,13 @@ "name": "MetChem", "version": "0.4", "sha256": "179634a8chsqfrq44il4dpyxrvadwdn1a7zm2h4ywim63w1dj02b", - "depends": ["fingerprint", "httr", "KODAMA", "rcdk", "XML"] + "depends": ["KODAMA", "XML", "fingerprint", "httr", "rcdk"] }, "MetGen": { "name": "MetGen", "version": "0.5", "sha256": "00yzaicrpwfnxi5mdzwx1ai721vczkkf2yl50q9wwpxhmfx0xbbh", - "depends": ["chron", "glmnet", "MASS"] + "depends": ["MASS", "chron", "glmnet"] }, "MetProc": { "name": "MetProc", @@ -19595,7 +19817,7 @@ "name": "MetSizeR", "version": "2.0.0", "sha256": "0blfdcd8z6qbaz47q08arb94wh3cp689w7vsc3jvn3cqq7r35byl", - "depends": ["dplyr", "ggplot2", "MetabolAnalyze", "Rfast", "shiny", "shinythemes", "vroom"] + "depends": ["MetabolAnalyze", "Rfast", "dplyr", "ggplot2", "shiny", "shinythemes", "vroom"] }, "MetaAnalyser": { "name": "MetaAnalyser", @@ -19617,21 +19839,21 @@ }, "MetaHD": { "name": "MetaHD", - "version": "0.1.0", - "sha256": "0qgzipw3gfhm22x70z83zinp7zr5xbyyw502j6p3r31r4k2glkp9", - "depends": ["corpcor", "Matrix", "matrixcalc", "Rcpp", "RcppArmadillo"] + "version": "0.1.2", + "sha256": "1fciy4zarl9gx1zdvrsgzq8y7jl59z8ljl2s2faqigsyd3nw3mbk", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "corpcor", "dplyr", "matrixcalc", "metafor", "tidyr"] }, "MetaIntegration": { "name": "MetaIntegration", "version": "0.1.2", "sha256": "0dbmpls6gipd81c79lvxqgyhzl3nmi0ma4szv8fcrh50jbwfvsql", - "depends": ["corpcor", "knitr", "MASS", "Rsolnp"] + "depends": ["MASS", "Rsolnp", "corpcor", "knitr"] }, "MetaIntegrator": { "name": "MetaIntegrator", "version": "2.1.3", "sha256": "1763in7zcfr4abhwc0sy27c1qbzbhkyjsasrhwdjjmsc645sqxlx", - "depends": ["AnnotationDbi", "Biobase", "BiocManager", "boot", "COCONUT", "data_table", "DBI", "dplyr", "DT", "GEOmetadb", "GEOquery", "ggplot2", "ggpubr", "gplots", "HGNChelper", "httpuv", "magrittr", "manhattanly", "Metrics", "multtest", "pheatmap", "plotly", "plyr", "pracma", "preprocessCore", "readr", "reshape2", "rmarkdown", "rmeta", "Rmisc", "RMySQL", "ROCR", "RSQLite", "stringr", "zoo"] + "depends": ["AnnotationDbi", "Biobase", "BiocManager", "COCONUT", "DBI", "DT", "GEOmetadb", "GEOquery", "HGNChelper", "Metrics", "RMySQL", "ROCR", "RSQLite", "Rmisc", "boot", "data_table", "dplyr", "ggplot2", "ggpubr", "gplots", "httpuv", "magrittr", "manhattanly", "multtest", "pheatmap", "plotly", "plyr", "pracma", "preprocessCore", "readr", "reshape2", "rmarkdown", "rmeta", "stringr", "zoo"] }, "MetaLandSim": { "name": "MetaLandSim", @@ -19655,7 +19877,7 @@ "name": "MetaNet", "version": "0.1.2", "sha256": "0r3id0ap91g948a10yka1lz82jib3ww91n24vlk4pbik7flxbqpk", - "depends": ["dplyr", "ggnewscale", "ggplot2", "ggrepel", "igraph", "magrittr", "pcutils", "RColorBrewer", "reshape2", "rlang", "tibble"] + "depends": ["RColorBrewer", "dplyr", "ggnewscale", "ggplot2", "ggrepel", "igraph", "magrittr", "pcutils", "reshape2", "rlang", "tibble"] }, "MetaSKAT": { "name": "MetaSKAT", @@ -19667,7 +19889,7 @@ "name": "MetaStan", "version": "1.0.0", "sha256": "00rj11q20apw7f5s6vw8fh7qxgfksndyiks1w907zzjlxhy9b4pj", - "depends": ["BH", "coda", "forestplot", "HDInterval", "loo", "metafor", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "HDInterval", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "coda", "forestplot", "loo", "metafor", "rstan", "rstantools"] }, "MetaSubtract": { "name": "MetaSubtract", @@ -19697,7 +19919,7 @@ "name": "MetabolicSurv", "version": "1.1.2", "sha256": "1c8i3a3gnbvlkjh0vqmz1igzaf8q87cb55l3kijwi0z23ywrbqch", - "depends": ["dplyr", "ggplot2", "glmnet", "matrixStats", "pls", "Rdpack", "rms", "superpc", "survival", "survminer", "tidyr"] + "depends": ["Rdpack", "dplyr", "ggplot2", "glmnet", "matrixStats", "pls", "rms", "superpc", "survival", "survminer", "tidyr"] }, "MetabolicSyndrome": { "name": "MetabolicSyndrome", @@ -19709,13 +19931,7 @@ "name": "MetabolomicsBasics", "version": "1.4.5", "sha256": "09yfakahah88sqranw56mr56jkqx6bgq52rcaj2bablr7bxswwvh", - "depends": ["C50", "caret", "e1071", "InterpretMSSpectrum", "pcaMethods", "plyr", "rlang", "rpart", "webchem"] - }, - "MetaculR": { - "name": "MetaculR", - "version": "0.4.1", - "sha256": "130ic9q221lmnr5wzmw7bbskqzi5gmw8ark5zpw3y8wy9zbv2m98", - "depends": ["assertthat", "clipr", "cowplot", "dplyr", "ggplot2", "ggrepel", "httr", "jsonlite", "magrittr", "progress", "spatstat_geom", "tidyr", "verification"] + "depends": ["C50", "InterpretMSSpectrum", "caret", "e1071", "pcaMethods", "plyr", "rlang", "rpart", "webchem"] }, "MethComp": { "name": "MethComp", @@ -19725,21 +19941,21 @@ }, "MethEvolSIM": { "name": "MethEvolSIM", - "version": "0.1.2", - "sha256": "03ncpy01dvmxrr43jyl8am9hkzp872rdph5padiy9ih4nzxdncmq", + "version": "0.1.5", + "sha256": "14lnj2jgxi4y5q26bzblc7f0ljlgj8c9gnh32jbyikyych28fb1k", "depends": ["R6"] }, "MethodCompare": { "name": "MethodCompare", - "version": "0.1.2", - "sha256": "1nxr2fgmfixjkdparavi156qqqchjwaxpjk9i2xgc1yhp1p01pll", - "depends": ["nlme"] + "version": "1.0.0", + "sha256": "10i9bxjsd7gdcdmrlyl1qymrhaikcb9jpzqi2hnnwcjaf0p1hfkr", + "depends": ["Matrix", "estimatr", "lme4", "mfp", "rockchalk"] }, "MetricGraph": { "name": "MetricGraph", "version": "1.3.0", "sha256": "1pd10pxqvdvqh1jml6rpn2j5w6j0hw87wd9f272yfwd4q9d2c29r", - "depends": ["broom", "dplyr", "ggnewscale", "ggplot2", "igraph", "lifecycle", "magrittr", "Matrix", "R6", "Rcpp", "RcppEigen", "rSPDE", "sf", "sp", "tidyr", "zoo"] + "depends": ["Matrix", "R6", "Rcpp", "RcppEigen", "broom", "dplyr", "ggnewscale", "ggplot2", "igraph", "lifecycle", "magrittr", "rSPDE", "sf", "sp", "tidyr", "zoo"] }, "Metrics": { "name": "Metrics", @@ -19767,27 +19983,27 @@ }, "Mhorseshoe": { "name": "Mhorseshoe", - "version": "0.1.2", - "sha256": "0ra7mswvqjm8vma4d1r3piz0wpsm1d4qwf39h99migri4mn2080y", + "version": "0.1.3", + "sha256": "064wyih65sqy66v5yr5cvvdm2crgbfkq8pzzcxvbp74vr8gxljdp", "depends": ["Rcpp"] }, "MiDA": { "name": "MiDA", "version": "0.1.2", "sha256": "144gxsxqljzskxsw5k0y69ix0pxlfvyyznxkjpf2ng4l47pg11z5", - "depends": ["caret", "gbm", "genefilter", "limma", "preprocessCore", "pROC", "SQN"] + "depends": ["SQN", "caret", "gbm", "genefilter", "limma", "pROC", "preprocessCore"] }, "MiMIR": { "name": "MiMIR", "version": "1.5", "sha256": "18z825r866yj9jadhdc5rlp8ykxrfbkdz5bpgpazm8r9w1ypk6hx", - "depends": ["caret", "dplyr", "DT", "foreach", "fs", "ggplot2", "heatmaply", "matrixStats", "plotly", "pROC", "purrr", "shiny", "shinycssloaders", "shinydashboard", "shinyFiles", "shinyjs", "shinyWidgets", "survival", "survminer"] + "depends": ["DT", "caret", "dplyr", "foreach", "fs", "ggplot2", "heatmaply", "matrixStats", "pROC", "plotly", "purrr", "shiny", "shinyFiles", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "survival", "survminer"] }, "MiRKAT": { "name": "MiRKAT", "version": "1.2.3", "sha256": "0y9j2dmw69a1n63mnbz8qg4pk69dzzhg42l3cq9i0s0yg8pp4pj6", - "depends": ["CompQuadForm", "GUniFrac", "lme4", "MASS", "Matrix", "mixtools", "PearsonDS", "permute", "quantreg", "survival"] + "depends": ["CompQuadForm", "GUniFrac", "MASS", "Matrix", "PearsonDS", "lme4", "mixtools", "permute", "quantreg", "survival"] }, "MiRNAQCD": { "name": "MiRNAQCD", @@ -19805,7 +20021,7 @@ "name": "MiSPU", "version": "1.0", "sha256": "1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply", - "depends": ["ape", "aSPU", "cluster", "Rcpp", "RcppArmadillo", "vegan"] + "depends": ["Rcpp", "RcppArmadillo", "aSPU", "ape", "cluster", "vegan"] }, "MicSim": { "name": "MicSim", @@ -19837,11 +20053,17 @@ "sha256": "166ci4crkwnnh05rhs5hyrljgm4cdf7gp0ff8kjxjmd60byw80mz", "depends": ["ggplot2", "reshape2"] }, + "MicroSEC": { + "name": "MicroSEC", + "version": "2.1.3", + "sha256": "1n9j955yy613qhs9zhy2mhy9mg95fp1q8jxxxgsy3n2kjim33pgv", + "depends": ["BiocGenerics", "Biostrings", "GenomeInfoDb", "Rsamtools", "dplyr", "stringr"] + }, "MicrobiomeStat": { "name": "MicrobiomeStat", "version": "1.2", "sha256": "1kpc68sl63k104xy7r6f3gxan0yx0rs7ksn8ldbq8xla00ddflgq", - "depends": ["foreach", "ggplot2", "ggrepel", "lmerTest", "MASS", "Matrix", "matrixStats", "modeest", "statmod"] + "depends": ["MASS", "Matrix", "foreach", "ggplot2", "ggrepel", "lmerTest", "matrixStats", "modeest", "statmod"] }, "MicrobiomeSurv": { "name": "MicrobiomeSurv", @@ -19853,13 +20075,13 @@ "name": "Microsoft365R", "version": "2.4.0", "sha256": "0vcp8nhphl9yp4rp53nvkm82zqmn1jsc9m6agxmmsqby8795p7h1", - "depends": ["AzureAuth", "AzureGraph", "curl", "httr", "jsonlite", "mime", "R6", "vctrs"] + "depends": ["AzureAuth", "AzureGraph", "R6", "curl", "httr", "jsonlite", "mime", "vctrs"] }, "MigConnectivity": { "name": "MigConnectivity", "version": "0.4.7", "sha256": "08bzis7rkczymvr2bqiih59yn94l0fjhkn0p9lpv875pwbvhmw1j", - "depends": ["coda", "geodist", "gplots", "MASS", "ncf", "R2jags", "RMark", "sf", "shape", "terra", "VGAM"] + "depends": ["MASS", "R2jags", "RMark", "VGAM", "coda", "geodist", "gplots", "ncf", "sf", "shape", "terra"] }, "MigrationDetectR": { "name": "MigrationDetectR", @@ -19871,7 +20093,7 @@ "name": "MinEDfind", "version": "0.1.3", "sha256": "1y0iv92mp7hf14vrj54qd0yvmjrv52jv3vg25kc5q7pml63njkqa", - "depends": ["ggplot2", "gridExtra", "Iso"] + "depends": ["Iso", "ggplot2", "gridExtra"] }, "MindOnStats": { "name": "MindOnStats", @@ -19901,7 +20123,7 @@ "name": "MissCP", "version": "0.1.0", "sha256": "0xmfkxwlkci11wwxdazs25k6z8apcl2vffkbpv8zic5lx1r9g2k4", - "depends": ["factoextra", "ggplot2", "glmnet", "mvtnorm", "Rcpp", "RcppArmadillo", "sparsevar"] + "depends": ["Rcpp", "RcppArmadillo", "factoextra", "ggplot2", "glmnet", "mvtnorm", "sparsevar"] }, "MissMech": { "name": "MissMech", @@ -19937,7 +20159,7 @@ "name": "MitoHEAR", "version": "0.1.0", "sha256": "1lb36w374wjp6f9ydkas21rwc2shlav1xq2rfzig1k034fkva8bj", - "depends": ["Biostrings", "circlize", "ComplexHeatmap", "dynamicTreeCut", "GenomicRanges", "ggplot2", "gridExtra", "IRanges", "magrittr", "mcclust", "rdist", "reshape2", "rlist", "Rsamtools"] + "depends": ["Biostrings", "ComplexHeatmap", "GenomicRanges", "IRanges", "Rsamtools", "circlize", "dynamicTreeCut", "ggplot2", "gridExtra", "magrittr", "mcclust", "rdist", "reshape2", "rlist"] }, "MittagLeffleR": { "name": "MittagLeffleR", @@ -19955,7 +20177,7 @@ "name": "MixGHD", "version": "2.3.7", "sha256": "0l1qivl9a5b8rayg9srxlgkk4wilv2m9yw4lsca29s5wd3wpyksv", - "depends": ["Bessel", "cluster", "e1071", "ghyp", "MASS", "mixture", "mvtnorm", "numDeriv"] + "depends": ["Bessel", "MASS", "cluster", "e1071", "ghyp", "mixture", "mvtnorm", "numDeriv"] }, "MixMatrix": { "name": "MixMatrix", @@ -19985,25 +20207,25 @@ "name": "MixSIAR", "version": "3.1.12", "sha256": "07wiv7x2c9mhqk37zndxvdb76m9shizc48qz2bp2f4g5z9hciid7", - "depends": ["bayesplot", "coda", "ggmcmc", "ggplot2", "lattice", "loo", "MASS", "MCMCpack", "R2jags", "RColorBrewer", "reshape", "reshape2", "splancs"] + "depends": ["MASS", "MCMCpack", "R2jags", "RColorBrewer", "bayesplot", "coda", "ggmcmc", "ggplot2", "lattice", "loo", "reshape", "reshape2", "splancs"] }, "MixSemiRob": { "name": "MixSemiRob", "version": "1.1.0", "sha256": "0rvpwb4skd5s0f7qnm2mjrhfz4ppa6inqyfz970mpycihig3vilc", - "depends": ["GoFKernel", "MASS", "mixtools", "mvtnorm", "pracma", "quadprog", "Rlab", "robustbase", "ucminf"] + "depends": ["GoFKernel", "MASS", "Rlab", "mixtools", "mvtnorm", "pracma", "quadprog", "robustbase", "ucminf"] }, "MixSim": { "name": "MixSim", - "version": "1.1-7", - "sha256": "1n6c3q78hbnjmwqxwr7i4lsv10mqkcwzf1jnlp6l9fxayhfz7jg7", + "version": "1.1-8", + "sha256": "0zfk3qkwap6p014jfdkl1ng5w4mqdm4klij7cnkx8zsgigs938lk", "depends": ["MASS"] }, "MixTwice": { "name": "MixTwice", "version": "2.0", "sha256": "11j591z1pnql84sfczvry7mg4hs0jghgp170y5j5wwhs7l5kc7r7", - "depends": ["alabama", "ashr", "fdrtool", "Iso"] + "depends": ["Iso", "alabama", "ashr", "fdrtool"] }, "MixedIndTests": { "name": "MixedIndTests", @@ -20021,13 +20243,13 @@ "name": "MixedPoisson", "version": "2.0", "sha256": "0g5mpzj0wda6g46q3cg5mm3x4dvpz9gdclzn2m17l62lzny2i10p", - "depends": ["gaussquad", "MASS", "Rmpfr"] + "depends": ["MASS", "Rmpfr", "gaussquad"] }, "MixedPsy": { "name": "MixedPsy", "version": "1.1.0", "sha256": "1iz3cl19xlznzbqxvichbjhyhams4v9611p9094r6q5fpmf71p88", - "depends": ["beepr", "boot", "brglm", "ggplot2", "lme4", "Matrix", "mnormt"] + "depends": ["Matrix", "beepr", "boot", "brglm", "ggplot2", "lme4", "mnormt"] }, "MixedTS": { "name": "MixedTS", @@ -20039,19 +20261,19 @@ "name": "MixfMRI", "version": "0.1-3", "sha256": "1cpkqvjkhr3l4y522xgjx2mwsvpzivf2h9wxslhgsqwds52ij0ad", - "depends": ["EMCluster", "fftw", "MASS", "Matrix", "MixSim", "RColorBrewer"] + "depends": ["EMCluster", "MASS", "Matrix", "MixSim", "RColorBrewer", "fftw"] }, "MixtureMissing": { "name": "MixtureMissing", "version": "3.0.2", "sha256": "15pz1rhbsaz5ml9swxqm6aifzb88qjpx0z5h2z229ddb0v9hxh29", - "depends": ["Bessel", "cluster", "MASS", "mclust", "mice", "mnormt", "mvtnorm", "numDeriv"] + "depends": ["Bessel", "MASS", "cluster", "mclust", "mice", "mnormt", "mvtnorm", "numDeriv"] }, "MixviR": { "name": "MixviR", "version": "3.5.0", "sha256": "0npwwpb96id4zkrp4qzpiv5sgw6y4aqhhwx7v8vbg54029p6jj6w", - "depends": ["Biostrings", "dplyr", "DT", "ggplot2", "glue", "httr", "lubridate", "magrittr", "plotly", "readr", "shiny", "stringr", "tidyr", "vcfR"] + "depends": ["Biostrings", "DT", "dplyr", "ggplot2", "glue", "httr", "lubridate", "magrittr", "plotly", "readr", "shiny", "stringr", "tidyr", "vcfR"] }, "Mmcsd": { "name": "Mmcsd", @@ -20087,13 +20309,7 @@ "name": "MoTBFs", "version": "1.4.1", "sha256": "03c1k5vvswlhbsivw6yznw1v0cdl8avs514iaa2v2994j2yk40j6", - "depends": ["bnlearn", "ggm", "lpSolve", "Matrix", "quadprog"] - }, - "MobileTrigger": { - "name": "MobileTrigger", - "version": "0.0.31", - "sha256": "1zbnxdxh6gr4sgpi10i0pnd85f7i842105jgjswacziqamby6mcy", - "depends": ["caret", "ggplot2", "kableExtra", "knitr", "mailR", "plyr", "XML", "yaml"] + "depends": ["Matrix", "bnlearn", "ggm", "lpSolve", "quadprog"] }, "ModEstM": { "name": "ModEstM", @@ -20109,9 +20325,9 @@ }, "ModTools": { "name": "ModTools", - "version": "0.9.6", - "sha256": "0f5afik98wg1yv722k3aycm35h3lv0pbd6zlsy4nvrnd51pdda4c", - "depends": ["AER", "C50", "car", "class", "DescTools", "e1071", "lattice", "lmtest", "MASS", "naivebayes", "NeuralNetTools", "nnet", "pROC", "randomForest", "relaimpo", "robustbase", "rpart", "rpart_plot", "sandwich", "survival"] + "version": "0.9.12", + "sha256": "09ag46i8a2lk99qxyf3jzsssv5k5jix8vvvdq2s89im20n8pk2q6", + "depends": ["AER", "C50", "DescTools", "MASS", "NeuralNetTools", "boot", "car", "class", "e1071", "lattice", "lmtest", "naivebayes", "nnet", "pROC", "randomForest", "relaimpo", "robustbase", "rpart", "rpart_plot", "sandwich", "survival"] }, "Modalclust": { "name": "Modalclust", @@ -20123,7 +20339,7 @@ "name": "ModelMap", "version": "3.4.0.4", "sha256": "022isqdfvrfblmw5lh0wqmyknzm11sdg011brdkwv3rc8xym3gaa", - "depends": ["corrplot", "fields", "HandTill2001", "mgcv", "PresenceAbsence", "randomForest", "raster"] + "depends": ["HandTill2001", "PresenceAbsence", "corrplot", "fields", "mgcv", "randomForest", "raster"] }, "ModelMatrixModel": { "name": "ModelMatrixModel", @@ -20135,7 +20351,7 @@ "name": "ModelMetrics", "version": "1.2.2.2", "sha256": "0mrlsw4c5y1vdsqynxr2dcvmhh5h37pnd71jw5a5djpbda9g21jy", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "Modelcharts": { "name": "Modelcharts", @@ -20147,13 +20363,13 @@ "name": "Modeler", "version": "3.4.5", "sha256": "15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1", - "depends": ["class", "ClassComparison", "ClassDiscovery", "e1071", "neuralnet", "nnet", "oompaBase", "randomForest", "rpart", "TailRank"] + "depends": ["ClassComparison", "ClassDiscovery", "TailRank", "class", "e1071", "neuralnet", "nnet", "oompaBase", "randomForest", "rpart"] }, "MolgenisArmadillo": { "name": "MolgenisArmadillo", "version": "2.6.3", "sha256": "11xy9cwnhacrxnyxhr8zs25yr20f27vqnh9nfm7x1180g1b2b4fr", - "depends": ["arrow", "base64enc", "cli", "dplyr", "httr", "httr2", "MolgenisAuth", "purrr", "readr", "rlist", "stringr", "tibble", "tidyr", "urltools"] + "depends": ["MolgenisAuth", "arrow", "base64enc", "cli", "dplyr", "httr", "httr2", "purrr", "readr", "rlist", "stringr", "tibble", "tidyr", "urltools"] }, "MolgenisAuth": { "name": "MolgenisAuth", @@ -20165,13 +20381,13 @@ "name": "MomTrunc", "version": "6.0", "sha256": "0nfvq6ry1c5g1xjvf2qyr5pzpnsy420m6xgj0n3aj00wi0ifdyiz", - "depends": ["hypergeo", "mvtnorm", "Rcpp", "RcppArmadillo", "tlrmvnmvt"] + "depends": ["Rcpp", "RcppArmadillo", "hypergeo", "mvtnorm", "tlrmvnmvt"] }, "Momocs": { "name": "Momocs", "version": "1.4.1", "sha256": "0g8mxk62pdif47p96pzqzfjdjarqwyk71zw9avsgy160mz8mpd81", - "depends": ["cluster", "dendextend", "dplyr", "geometry", "geomorph", "ggplot2", "jpeg", "magrittr", "MASS", "progress", "RColorBrewer", "sf", "sp", "tibble", "vegan"] + "depends": ["MASS", "RColorBrewer", "cluster", "dendextend", "dplyr", "geometry", "geomorph", "ggplot2", "jpeg", "magrittr", "progress", "sf", "sp", "tibble", "vegan"] }, "Mondrian": { "name": "Mondrian", @@ -20183,7 +20399,7 @@ "name": "MonetDB.R", "version": "2.0.0", "sha256": "0b5flc9l4nshy2fmwxbzcsn7pdivwy3x6kic94ppyyiqzz41h0b1", - "depends": ["codetools", "DBI", "digest", "testthat"] + "depends": ["DBI", "codetools", "digest", "testthat"] }, "MonoInc": { "name": "MonoInc", @@ -20195,7 +20411,7 @@ "name": "MonoPhy", "version": "1.3.1", "sha256": "120vpz40iil4j6rdhnnhss4rmpfcyh3h0dpw3qkmzadb7mywr7dr", - "depends": ["ape", "phangorn", "phytools", "RColorBrewer", "taxize"] + "depends": ["RColorBrewer", "ape", "phangorn", "phytools", "taxize"] }, "MonoPoly": { "name": "MonoPoly", @@ -20219,19 +20435,19 @@ "name": "MonteCarloSEM", "version": "0.0.8", "sha256": "0l9c6a8yxjd2n1fvsswx3csgz18g7d33ybbmpxlx6csl5f299ljd", - "depends": ["lavaan", "Matrix"] + "depends": ["Matrix", "lavaan"] }, "Morpho": { "name": "Morpho", "version": "2.12", "sha256": "1hg1jr0y11v93mqg2kn8n841nbsiffhyyr2kswj7kk664vlpril0", - "depends": ["bezier", "colorRamps", "doParallel", "foreach", "jsonlite", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "rgl", "Rvcg", "sf"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rvcg", "bezier", "colorRamps", "doParallel", "foreach", "jsonlite", "rgl", "sf"] }, "MorphoTools2": { "name": "MorphoTools2", "version": "1.0.1.1", "sha256": "08n9l905pfls50p278sypf8xxq6bs56f5a5b5wlxwy11flccpyia", - "depends": ["ade4", "candisc", "car", "class", "ellipse", "heplots", "MASS", "plot3D", "StatMatch", "vegan"] + "depends": ["MASS", "StatMatch", "ade4", "candisc", "car", "class", "ellipse", "heplots", "plot3D", "vegan"] }, "Morphoscape": { "name": "Morphoscape", @@ -20249,13 +20465,13 @@ "name": "MortalityGaps", "version": "1.0.0", "sha256": "0nfm8xa7gnshrl8hsvmvr3za8nbppp7f7i5h4ni204w7xwvh8jxc", - "depends": ["crch", "forecast", "MASS", "pbapply"] + "depends": ["MASS", "crch", "forecast", "pbapply"] }, "MortalityLaws": { "name": "MortalityLaws", "version": "2.1.0", "sha256": "1jczy0brmma71cn2xhhnl1g2k9nr6l3zf5zw6bvwn10l1gid4908", - "depends": ["httr", "minpack_lm", "pbapply", "RCurl", "rvest", "tidyr"] + "depends": ["RCurl", "httr", "minpack_lm", "pbapply", "rvest", "tidyr"] }, "MortalityTables": { "name": "MortalityTables", @@ -20285,25 +20501,25 @@ "name": "MtreeRing", "version": "1.4.5", "sha256": "1i6ljz950n9fpgci9b5777dg3b88ihhz8jvyw621hg218imswhxz", - "depends": ["bmp", "dplR", "dplyr", "imager", "jpeg", "magick", "magrittr", "measuRing", "png", "shiny", "shinydashboard", "shinyWidgets", "spatstat_geom", "tiff"] + "depends": ["bmp", "dplR", "dplyr", "imager", "jpeg", "magick", "magrittr", "measuRing", "png", "shiny", "shinyWidgets", "shinydashboard", "spatstat_geom", "tiff"] }, "MuChPoint": { "name": "MuChPoint", "version": "0.6.3", "sha256": "0mixy2rcr23rk823r1r3s2bhr22dhsx56xvkk0djvfdb60pq0kfh", - "depends": ["capushe", "Matrix", "Rcpp", "shiny"] + "depends": ["Matrix", "Rcpp", "capushe", "shiny"] }, "MuMIn": { "name": "MuMIn", - "version": "1.47.5", - "sha256": "0xqasb79lmdhff25zalzrpjwv6qs9qnxr54ypnqjjgshi96mbwvg", - "depends": ["insight", "Matrix", "nlme"] + "version": "1.48.4", + "sha256": "04zn63snv218c44nllfh8bqh5xg0gamd9fcpwxisvi9gwb3f20i0", + "depends": ["Matrix", "insight", "nlme"] }, "MuViCP": { "name": "MuViCP", "version": "1.3.2", "sha256": "1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4", - "depends": ["gtools", "MASS", "sm"] + "depends": ["MASS", "gtools", "sm"] }, "MullerPlot": { "name": "MullerPlot", @@ -20321,7 +20537,7 @@ "name": "MultBiplotR", "version": "23.11.0", "sha256": "0qcf97r9f5l572dckfvi9pjl2gvc6zw36z34pbbfwxha8bnqiyqc", - "depends": ["car", "dae", "deldir", "dunn_test", "geometry", "GPArotation", "gplots", "Hmisc", "knitr", "lattice", "MASS", "mirt", "mvtnorm", "polycor", "psych", "scales", "ThreeWay", "xtable"] + "depends": ["GPArotation", "Hmisc", "MASS", "ThreeWay", "car", "dae", "deldir", "dunn_test", "geometry", "gplots", "knitr", "lattice", "mirt", "mvtnorm", "polycor", "psych", "scales", "xtable"] }, "MultEq": { "name": "MultEq", @@ -20333,7 +20549,7 @@ "name": "MultIS", "version": "0.6.2", "sha256": "02ca1r8qfsl1b8rfawdn4xrlwhg5yab260rrsx8ckyv3v75knk8f", - "depends": ["cluster", "clv", "clValid", "dplyr", "foreach", "ggplot2", "igraph", "ltm", "plyr", "poweRlaw", "RColorBrewer", "reshape2", "rlang", "rmutil"] + "depends": ["RColorBrewer", "clValid", "cluster", "clv", "dplyr", "foreach", "ggplot2", "igraph", "ltm", "plyr", "poweRlaw", "reshape2", "rlang", "rmutil"] }, "MultNonParam": { "name": "MultNonParam", @@ -20347,6 +20563,12 @@ "sha256": "1f23im0m77y8aqdnmkcgdgfx77z84wlwih1wv74by15m4ysj4l2h", "depends": ["Rcpp", "RcppArmadillo", "statmod"] }, + "MultRegCMP": { + "name": "MultRegCMP", + "version": "0.1.0", + "sha256": "01gb6a5kj8gdf57g9c9xzxid5h437g9y625w2d8wfjil97c012x4", + "depends": ["bayesplot", "cowplot", "ggplot2", "mvnfast", "progress", "purrr"] + }, "MultSurvTests": { "name": "MultSurvTests", "version": "0.2", @@ -20369,7 +20591,7 @@ "name": "MultiCOAP", "version": "1.1", "sha256": "1209pv52lgshfk67nfkp4fq4fm7k9g5ly2yilrzwihywsym8yxmp", - "depends": ["irlba", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "irlba"] }, "MultiClassROC": { "name": "MultiClassROC", @@ -20381,25 +20603,25 @@ "name": "MultiFit", "version": "1.1.1", "sha256": "086bnqp61mfanrhi7dqaq5j2ddg3rfiyms0f5wj34svcjal9wjvc", - "depends": ["data_table", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table"] }, "MultiGlarmaVarSel": { "name": "MultiGlarmaVarSel", "version": "1.0", "sha256": "1cpxy716ca7xa6y7sjrrssx6r4wc1fr2p0i5im5s745xlc66qi06", - "depends": ["ggplot2", "glmnet", "Matrix"] + "depends": ["Matrix", "ggplot2", "glmnet"] }, "MultiGroupO": { "name": "MultiGroupO", - "version": "0.3.0", - "sha256": "0vyq1xzxh6zjzdsvp0gib32xxz1c3672kj3ifn5fv0bf8yjjc2gk", + "version": "0.4.0", + "sha256": "0yiia0zf54hwr9gd2jisasmg996w1ajnak1i1ls5dl2bpfic31gn", "depends": ["cowplot", "expm", "ggplot2", "ggrepel", "gplots", "gridExtra", "lemon", "mgm", "mvtnorm", "plsgenomics", "qgraph", "rlist"] }, "MultiGroupSequential": { "name": "MultiGroupSequential", "version": "1.1.0", "sha256": "0mx0a10260ks77njxf7yhxwhw66b7rjlqkjxmidvxbl6r0jfgr5b", - "depends": ["hommel", "OpenMx"] + "depends": ["OpenMx", "hommel"] }, "MultiJoin": { "name": "MultiJoin", @@ -20411,31 +20633,31 @@ "name": "MultiKink", "version": "0.2.0", "sha256": "14npzvidqiy25ldg2g4vyj6bbrmi9vbpswbm9ah9hc4sdjdq344h", - "depends": ["gam", "Matrix", "pracma", "quantreg"] + "depends": ["Matrix", "gam", "pracma", "quantreg"] }, "MultiLCIRT": { "name": "MultiLCIRT", "version": "2.11", "sha256": "1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4", - "depends": ["limSolve", "MASS"] + "depends": ["MASS", "limSolve"] }, "MultiObjMatch": { "name": "MultiObjMatch", - "version": "0.1.3", - "sha256": "1a20ca8k7plgdz084hrjrlx7p1nm1cl74v3vlk3jk1dwbgq04833", - "depends": ["cobalt", "dplyr", "fields", "gtools", "MASS", "matchMulti", "optmatch", "plyr", "rcbalance", "RCurl", "rlemon"] + "version": "1.0.0", + "sha256": "0pgmhwydxi741ys8j1ba00rp6gbssjzgamqrywhvpc0jddaqdmrc", + "depends": ["MASS", "RCurl", "cobalt", "dplyr", "fields", "ggplot2", "gtools", "matchMulti", "optmatch", "plyr", "rcbalance", "rlang", "rlemon"] }, "MultiOrd": { "name": "MultiOrd", "version": "2.4.3", "sha256": "1fmp8979ibxrx43vhi6dncljpbc1388y915d4g0gnl6a7z8g1dnh", - "depends": ["corpcor", "Matrix", "mvtnorm", "psych"] + "depends": ["Matrix", "corpcor", "mvtnorm", "psych"] }, "MultiPhen": { "name": "MultiPhen", "version": "2.0.3", "sha256": "0razswg4wqsz4q0dvpxp3swmxk82ig8gkyi4vcmxh11nlhb258w3", - "depends": ["abind", "epitools", "HardyWeinberg", "MASS", "meta", "RColorBrewer"] + "depends": ["HardyWeinberg", "MASS", "RColorBrewer", "abind", "epitools", "meta"] }, "MultiRNG": { "name": "MultiRNG", @@ -20447,7 +20669,7 @@ "name": "MultiRR", "version": "1.1", "sha256": "1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3", - "depends": ["lme4", "MASS"] + "depends": ["MASS", "lme4"] }, "MultiRobust": { "name": "MultiRobust", @@ -20463,27 +20685,21 @@ }, "MultiStatM": { "name": "MultiStatM", - "version": "1.2.1", - "sha256": "0b0wk2zz8p0zqhv6f5030jpl4wxlnx3yya5i1jh7bm0rxyyx6d18", - "depends": ["arrangements", "MASS", "Matrix", "mvtnorm"] + "version": "2.0.0", + "sha256": "1d2dzchg6xmaazr6sajxq7f5bkx24m70w593wbmn49xxq8fbf1hp", + "depends": ["MASS", "Matrix", "arrangements", "mvtnorm"] }, "MultiVarMI": { "name": "MultiVarMI", "version": "1.0", "sha256": "1mlaprg3cfmfwrq7wh64fmyv1wpdnil7wpcrcg3921qydk65py6z", - "depends": ["BinOrdNonNor", "corpcor", "CorrToolBox", "Matrix", "moments", "norm", "PoisNonNor"] + "depends": ["BinOrdNonNor", "CorrToolBox", "Matrix", "PoisNonNor", "corpcor", "moments", "norm"] }, "MultiVarSel": { "name": "MultiVarSel", "version": "1.1.3", "sha256": "18wcw80m5knv6hbzczjsx3lf7sn9n84z12zz844agp6234im163p", - "depends": ["glmnet", "Matrix"] - }, - "Multiaovbay": { - "name": "Multiaovbay", - "version": "0.1.0", - "sha256": "0c5563h9v2xnxbxf9qkd567v154lnjnlyvc5aqbv4vd7awi8mn71", - "depends": ["BayesFactor", "broom", "car", "dplyr", "DT", "ggplot2", "ggstatsplot", "highcharter", "htmltools", "moments", "nortest", "PMCMRplus", "purrr", "reshape", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "stringr", "tibble", "waiter"] + "depends": ["Matrix", "glmnet"] }, "MultinomialCI": { "name": "MultinomialCI", @@ -20501,7 +20717,7 @@ "name": "MultipleBubbles", "version": "0.2.0", "sha256": "047a1pql3jf500gwlap6ws5z7mx0sqmdq6jbql24nl5iypi9jqpf", - "depends": ["foreach", "MASS"] + "depends": ["MASS", "foreach"] }, "MultipleRegression": { "name": "MultipleRegression", @@ -20513,31 +20729,31 @@ "name": "MultiplierDEA", "version": "0.1.19", "sha256": "0ns74496grklacpij2cvbv116kc77wa8kv3jdy9fjzxk8yd6kv4d", - "depends": ["dplyr", "lpSolveAPI", "ompr", "ompr_roi", "ROI", "ROI_plugin_glpk"] + "depends": ["ROI", "ROI_plugin_glpk", "dplyr", "lpSolveAPI", "ompr", "ompr_roi"] }, "MultiscaleDTM": { "name": "MultiscaleDTM", "version": "0.8.3", "sha256": "13kslxxbyil5y4ci5s9r0n0ymsrh8c65wvsdzhcgafh9ldr6l1ww", - "depends": ["dplyr", "raster", "Rcpp", "RcppArmadillo", "rgl", "shiny", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "raster", "rgl", "shiny", "terra"] }, "MultisiteMediation": { "name": "MultisiteMediation", "version": "0.0.4", "sha256": "0kkw6zxw29qmgd9nlgqjlyh99icxzkkqnpzzanxx8pn7m2ww0wkf", - "depends": ["ggplot2", "lme4", "MASS", "psych", "statmod"] + "depends": ["MASS", "ggplot2", "lme4", "psych", "statmod"] }, "MultivariateAnalysis": { "name": "MultivariateAnalysis", "version": "0.5.0", "sha256": "1hphl6swqkfjqbybkcpvf0bda6jf434v7l6pqzlviqzlnww94riv", - "depends": ["biotools", "candisc", "corrplot", "crayon", "ecodist", "factoextra", "ggdendro", "ggplot2", "gridExtra", "magrittr", "NbClust", "PCAmixdata", "plotly", "rstudioapi"] + "depends": ["NbClust", "PCAmixdata", "biotools", "candisc", "corrplot", "crayon", "ecodist", "factoextra", "ggdendro", "ggplot2", "gridExtra", "magrittr", "plotly", "rstudioapi"] }, "MultivariateRandomForest": { "name": "MultivariateRandomForest", "version": "1.1.5", "sha256": "0mww4x1hqraiyvmw2f9s6h180kplmj36hb7zfg7xlkmgdf4apk8d", - "depends": ["bootstrap", "Rcpp"] + "depends": ["Rcpp", "bootstrap"] }, "MultiwayRegression": { "name": "MultiwayRegression", @@ -20603,13 +20819,7 @@ "name": "NADA2", "version": "1.1.6", "sha256": "1kz1rvzjp18avm2jbsswnzz9jsdmk20h0vj9gs5bvjl56llih48q", - "depends": ["cenGAM", "coin", "EnvStats", "fitdistrplus", "Kendall", "mgcv", "multcomp", "NADA", "perm", "survival", "survminer", "vegan"] - }, - "NADIA": { - "name": "NADIA", - "version": "0.4.2", - "sha256": "19545sc75a82smjvvyd353wjlh3wwzhwapcrk9fkg3ffjv9p4a3n", - "depends": ["Amelia", "data_table", "doParallel", "foreach", "glmnet", "mice", "missForest", "missMDA", "missRanger", "mlr3", "mlr3learners", "mlr3pipelines", "paradox", "rpart", "softImpute", "testthat", "VIM"] + "depends": ["EnvStats", "Kendall", "NADA", "cenGAM", "coin", "fitdistrplus", "mgcv", "multcomp", "perm", "survival", "survminer", "vegan"] }, "NAEPirtparams": { "name": "NAEPirtparams", @@ -20627,7 +20837,7 @@ "name": "NAIR", "version": "1.0.4", "sha256": "0xxps6ri53i6fw0wd58v593jqcsiwr36lgqnx7bnf1b47pqnqc64", - "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "lifecycle", "Matrix", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "ggraph", "igraph", "lifecycle", "rlang"] }, "NAM": { "name": "NAM", @@ -20711,19 +20921,19 @@ "name": "NBtsVarSel", "version": "1.0", "sha256": "0dwmi69ahyrq54nx1xi591i3g87r4aiv9l5k81lhqwa2aniv6snh", - "depends": ["ggplot2", "glmnet", "MASS", "Matrix", "mpath"] + "depends": ["MASS", "Matrix", "ggplot2", "glmnet", "mpath"] }, "NCA": { "name": "NCA", "version": "4.0.1", "sha256": "0r7m6aklidi6dplv42xmaq38ifxs8zj495rs7pfidwx7z5iw0n84", - "depends": ["doParallel", "foreach", "ggplot2", "gplots", "iterators", "KernSmooth", "lpSolve", "plotly", "quantreg", "truncnorm"] + "depends": ["KernSmooth", "doParallel", "foreach", "ggplot2", "gplots", "iterators", "lpSolve", "plotly", "quantreg", "truncnorm"] }, "NCC": { "name": "NCC", "version": "1.0", "sha256": "0zp854m5ig8w5xag4a1s56b33kfjds3wqydjxacvj5fkpr1y586d", - "depends": ["doParallel", "foreach", "ggplot2", "iterators", "lmerTest", "magick", "mgcv", "parallelly", "RBesT", "rjags", "rlang", "spaMM"] + "depends": ["RBesT", "doParallel", "foreach", "ggplot2", "iterators", "lmerTest", "magick", "mgcv", "parallelly", "rjags", "rlang", "spaMM"] }, "NCSCopula": { "name": "NCSCopula", @@ -20747,7 +20957,7 @@ "name": "NCutYX", "version": "0.1.0", "sha256": "0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2", - "depends": ["fields", "glmnet", "MASS", "mvtnorm", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Rcpp", "RcppEigen", "fields", "glmnet", "mvtnorm"] }, "NDP": { "name": "NDP", @@ -20759,19 +20969,19 @@ "name": "NEONiso", "version": "0.7.0", "sha256": "1nkwymy6zyyk8g6lxk45srqf285329x60plhkbkm0wif6kx777s0", - "depends": ["caret", "data_table", "dplyr", "ggplot2", "gridExtra", "httr", "lubridate", "magrittr", "neonUtilities", "R_utils", "rhdf5", "rlang", "tidyselect", "zoo"] + "depends": ["R_utils", "caret", "data_table", "dplyr", "ggplot2", "gridExtra", "httr", "lubridate", "magrittr", "neonUtilities", "rhdf5", "rlang", "tidyselect", "zoo"] }, "NEpiC": { "name": "NEpiC", "version": "1.0.1", "sha256": "11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8", - "depends": ["igraph", "PairedData"] + "depends": ["PairedData", "igraph"] }, "NFCP": { "name": "NFCP", "version": "1.2.1", "sha256": "16dvk8jiyzd94lfif0nkwc0ix05is8bhyykaaa6p1irwgzk8cia4", - "depends": ["curl", "FKF_SP", "LSMRealOptions", "MASS", "mathjaxr", "numDeriv", "Rdpack", "rgenoud"] + "depends": ["FKF_SP", "LSMRealOptions", "MASS", "Rdpack", "curl", "mathjaxr", "numDeriv", "rgenoud"] }, "NFLSimulatoR": { "name": "NFLSimulatoR", @@ -20837,13 +21047,13 @@ "name": "NHSRplotthedots", "version": "0.1.0", "sha256": "1rqryqaxyb3d6kws8mznsnzv19h8nhn1323vkh9zq59la9r3kiai", - "depends": ["assertthat", "crayon", "dplyr", "ggplot2", "NHSRdatasets", "rlang", "scales"] + "depends": ["NHSRdatasets", "assertthat", "crayon", "dplyr", "ggplot2", "rlang", "scales"] }, "NIMAA": { "name": "NIMAA", "version": "0.2.1", "sha256": "1lnxh9mak25mji38bifrif6qg0rjg3fj0lacjdgpk8iqjallvq7y", - "depends": ["bipartite", "bnstruct", "crayon", "dplyr", "fpc", "ggplot2", "igraph", "mice", "missMDA", "networkD3", "plotly", "purrr", "RColorBrewer", "scales", "skimr", "softImpute", "tibble", "tidyr", "tidytext", "visNetwork"] + "depends": ["RColorBrewer", "bipartite", "bnstruct", "crayon", "dplyr", "fpc", "ggplot2", "igraph", "mice", "missMDA", "networkD3", "plotly", "purrr", "scales", "skimr", "softImpute", "tibble", "tidyr", "tidytext", "visNetwork"] }, "NIPTeR": { "name": "NIPTeR", @@ -20871,21 +21081,21 @@ }, "NLP": { "name": "NLP", - "version": "0.2-1", - "sha256": "1dpj04fmld2lnhg072ahgjbhmciqqy9h1lrz0wf32mr7mm9s9sh5", + "version": "0.3-0", + "sha256": "1v5kszwj56hdyd07ya9p0caxrd4ckpa1x6d0y6d1xrsi074638n0", "depends": [] }, "NLPclient": { "name": "NLPclient", "version": "1.0", "sha256": "0jhlz9mqziyk5574vl8qjjs4g75x27rlk90wvzm3q9kjrjyvad35", - "depends": ["curl", "NLP", "xml2"] + "depends": ["NLP", "curl", "xml2"] }, "NLPutils": { "name": "NLPutils", "version": "0.0-5.1", "sha256": "1ca7cqfjzrhn0idgw8viqlr2w4lkzng64bqk8hvd08qm7bgg5vjl", - "depends": ["NLP", "qdap", "SnowballC"] + "depends": ["NLP", "SnowballC", "qdap"] }, "NLRoot": { "name": "NLRoot", @@ -20897,25 +21107,25 @@ "name": "NMA", "version": "1.4-3", "sha256": "09y3arzw08054xb1y3nmnnzxybgjm2yyvkc530avpqkl1yrb1ap2", - "depends": ["forestplot", "ggplot2", "MASS", "metafor", "stringr"] + "depends": ["MASS", "forestplot", "ggplot2", "metafor", "stringr"] }, "NMADiagT": { "name": "NMADiagT", "version": "0.1.2", "sha256": "0fskc3ldfdl17gazpfr2hixy79n7db4c1f5yl1jalhwxiabnxjwp", - "depends": ["coda", "ggplot2", "imguR", "ks", "MASS", "MCMCpack", "plotrix", "Rdpack", "reshape2", "rjags"] + "depends": ["MASS", "MCMCpack", "Rdpack", "coda", "ggplot2", "imguR", "ks", "plotrix", "reshape2", "rjags"] }, "NMAoutlier": { "name": "NMAoutlier", "version": "0.1.18", "sha256": "0h0pxjg6ppz9zv7wcv1dka5g0f9wxk3bnwicfpsv1advcam4vmmn", - "depends": ["ggplot2", "gridExtra", "MASS", "meta", "netmeta", "reshape2"] + "depends": ["MASS", "ggplot2", "gridExtra", "meta", "netmeta", "reshape2"] }, "NMF": { "name": "NMF", "version": "0.27", "sha256": "1y9y7xpfd9y8j5b8s2x5g61455ilpgqpdhrirpz58xjarbph4hxg", - "depends": ["Biobase", "BiocManager", "cluster", "codetools", "colorspace", "digest", "doParallel", "foreach", "ggplot2", "gridBase", "RColorBrewer", "registry", "reshape2", "rngtools", "stringr"] + "depends": ["Biobase", "BiocManager", "RColorBrewer", "cluster", "codetools", "colorspace", "digest", "doParallel", "foreach", "ggplot2", "gridBase", "registry", "reshape2", "rngtools", "stringr"] }, "NMFN": { "name": "NMFN", @@ -20945,13 +21155,13 @@ "name": "NMRphasing", "version": "1.0.4", "sha256": "0rg2y26bnksp2hjbjn3xplnpi2hgc4ghlw796rqhjkmnrq9h1hrs", - "depends": ["baseline", "MassSpecWavelet"] + "depends": ["MassSpecWavelet", "baseline"] }, "NMTox": { "name": "NMTox", "version": "0.1.0", "sha256": "1slz6bq57l3f2wqd2nhm3b7dag6vg7wy9zi5rpl7ld1yyqfb0wfp", - "depends": ["dplyr", "forcats", "ggplot2", "gridExtra", "Iso", "tidyr"] + "depends": ["Iso", "dplyr", "forcats", "ggplot2", "gridExtra", "tidyr"] }, "NMVANOVA": { "name": "NMVANOVA", @@ -20973,9 +21183,9 @@ }, "NMsim": { "name": "NMsim", - "version": "0.1.0", - "sha256": "1lmfb6h78vj6r6n6br9awkxrq445f9cgzhsz06rzkydnb10xldrk", - "depends": ["data_table", "fst", "MASS", "NMdata", "R_utils", "xfun"] + "version": "0.1.2", + "sha256": "14n4zr32vjsdjafx7rc9x8x9hjdmvw86lh9hy66lavp3005xznia", + "depends": ["MASS", "NMdata", "R_utils", "data_table", "fst", "xfun"] }, "NNMIS": { "name": "NNMIS", @@ -20987,7 +21197,7 @@ "name": "NNS", "version": "10.8.2", "sha256": "11jacanqf7c7kaarwc6micmhzg47sna1lfj5fkpvpa9396xpbrjd", - "depends": ["data_table", "doParallel", "foreach", "plyr", "quantmod", "Rcpp", "RcppParallel", "Rfast", "rgl", "xts", "zoo"] + "depends": ["Rcpp", "RcppParallel", "Rfast", "data_table", "doParallel", "foreach", "plyr", "quantmod", "rgl", "xts", "zoo"] }, "NNTbiomarker": { "name": "NNTbiomarker", @@ -20999,7 +21209,7 @@ "name": "NNbenchmark", "version": "3.2.0", "sha256": "086smk3xy6p6ianw41h3gx806q7h28v1dg9d3khsrwyyf9gn8xyp", - "depends": ["pkgload", "R6"] + "depends": ["R6", "pkgload"] }, "NO_PING_PONG": { "name": "NO.PING.PONG", @@ -21017,7 +21227,7 @@ "name": "NPBayesImputeCat", "version": "0.5", "sha256": "05zwa7hhf8p1icgdvvla0r70fgvjm7s38gp69h7wgsq8yl6vd876", - "depends": ["bayesplot", "dplyr", "ggplot2", "Rcpp", "reshape2", "rlang"] + "depends": ["Rcpp", "bayesplot", "dplyr", "ggplot2", "reshape2", "rlang"] }, "NPCD": { "name": "NPCD", @@ -21029,7 +21239,7 @@ "name": "NPCirc", "version": "3.1.1", "sha256": "0qcam9n9llsblrpa2w0yj0axh79qwinz4wwbf4gvyrajfv935i8i", - "depends": ["Bolstad2", "circular", "misc3d", "movMF", "plotrix", "Rcpp", "RcppArmadillo", "rgl", "shape"] + "depends": ["Bolstad2", "Rcpp", "RcppArmadillo", "circular", "misc3d", "movMF", "plotrix", "rgl", "shape"] }, "NPCox": { "name": "NPCox", @@ -21067,29 +21277,35 @@ "sha256": "1jyxnblr8ibzlwb78k98idf856m5gnaba3b53qz0pfgxf2k8wdhv", "depends": [] }, + "NPRED": { + "name": "NPRED", + "version": "1.1.0", + "sha256": "1gn70lcmkqn686a486b7h8f98kb17y358l1kbxpn4m7mjyy5l862", + "depends": [] + }, "NPflow": { "name": "NPflow", "version": "0.13.5", "sha256": "14i5pfvpjj25frvxrfvch5a8ja8y4mnsk9h2ikcwh949br6mjq52", - "depends": ["ellipse", "fastcluster", "GGally", "ggplot2", "pheatmap", "Rcpp", "RcppArmadillo", "reshape2", "truncnorm"] + "depends": ["GGally", "Rcpp", "RcppArmadillo", "ellipse", "fastcluster", "ggplot2", "pheatmap", "reshape2", "truncnorm"] }, "NRejections": { "name": "NRejections", "version": "1.2.0", "sha256": "0lzj7kyn4s8l306a6xwkgkv1z4dlfsr61i902lvdxv4ln4m6a5kq", - "depends": ["doParallel", "foreach", "matrixcalc", "mvtnorm", "StepwiseTest"] + "depends": ["StepwiseTest", "doParallel", "foreach", "matrixcalc", "mvtnorm"] }, "NSAE": { "name": "NSAE", "version": "0.4.0", "sha256": "1pig0b2g6z1pc6is3nw7m88zwvwpg3pwvifvyc6p38kbin57m1pb", - "depends": ["cluster", "lattice", "MASS", "Matrix", "nlme", "numDeriv", "rlist", "SemiPar", "spgwr"] + "depends": ["MASS", "Matrix", "SemiPar", "cluster", "lattice", "nlme", "numDeriv", "rlist", "spgwr"] }, "NSM3": { "name": "NSM3", "version": "1.18", "sha256": "0m0ijafjlw9pili0hxfrv5blj9ysxhhwj6c4hpnp5ry97a4gkib9", - "depends": ["agricolae", "ash", "binom", "BSDA", "coin", "combinat", "fANCOVA", "gtools", "Hmisc", "km_ci", "MASS", "metafor", "nortest", "np", "partitions", "quantreg", "Rfit", "SuppDists", "survival", "waveslim"] + "depends": ["BSDA", "Hmisc", "MASS", "Rfit", "SuppDists", "agricolae", "ash", "binom", "coin", "combinat", "fANCOVA", "gtools", "km_ci", "metafor", "nortest", "np", "partitions", "quantreg", "survival", "waveslim"] }, "NSO1212": { "name": "NSO1212", @@ -21101,7 +21317,7 @@ "name": "NST", "version": "3.1.10", "sha256": "1ycpccg7hcg84ygjzksbi0fcrkisvis5165bbnj64h52gjifgxh7", - "depends": ["ape", "bigmemory", "DirichletReg", "iCAMP", "permute", "vegan"] + "depends": ["DirichletReg", "ape", "bigmemory", "iCAMP", "permute", "vegan"] }, "NScluster": { "name": "NScluster", @@ -21119,13 +21335,13 @@ "name": "NTS", "version": "1.1.3", "sha256": "0scj05h2r3sg34n0lmarbrgavz6q2n23gvs2v4w5q249q2cx6iis", - "depends": ["dlm", "MASS", "MSwM", "Rdpack", "tensor"] + "depends": ["MASS", "MSwM", "Rdpack", "dlm", "tensor"] }, "NTSS": { "name": "NTSS", "version": "0.1.3", "sha256": "18j7q5976ij0sn05j7s1k6rz7m8vi5lq7qx72cz9m8lj2f5l8apc", - "depends": ["geoR", "GET", "ks", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_univar"] + "depends": ["GET", "geoR", "ks", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_univar"] }, "NU_Learning": { "name": "NU.Learning", @@ -21155,7 +21371,13 @@ "name": "NVCSSL", "version": "2.0", "sha256": "1nsdhmay2blfa07ri1kfb204di8s5i7zk7qwwlbkhdjjl0qa3vd7", - "depends": ["dae", "GIGrvg", "grpreg", "MASS", "Matrix", "MCMCpack", "mvtnorm", "plyr"] + "depends": ["GIGrvg", "MASS", "MCMCpack", "Matrix", "dae", "grpreg", "mvtnorm", "plyr"] + }, + "NaileR": { + "name": "NaileR", + "version": "1.1.0", + "sha256": "03vrsv2mx4k3hp3wiscsvmg7kgscaikrx5a1qyybawl7vy92j0p4", + "depends": ["FactoMineR", "dplyr", "glue", "magrittr", "ollamar", "stringr"] }, "NameNeedle": { "name": "NameNeedle", @@ -21197,7 +21419,7 @@ "name": "NegBinBetaBinreg", "version": "1.0", "sha256": "0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d", - "depends": ["boot", "Matrix", "mvtnorm"] + "depends": ["Matrix", "boot", "mvtnorm"] }, "NegativeControlOutcomeAdjustment": { "name": "NegativeControlOutcomeAdjustment", @@ -21209,19 +21431,19 @@ "name": "Neighboot", "version": "1.0.1", "sha256": "18r6cww9g4fchf6hlwkw1lajh0lg4ch6msvx54zqgkrnhpixchnc", - "depends": ["dplyr", "igraph", "RDS", "RDStreeboot"] + "depends": ["RDS", "RDStreeboot", "dplyr", "igraph"] }, "NestMRMC": { "name": "NestMRMC", "version": "1.0", "sha256": "08zk9g3mkwyli94ry1s762ddniwzjlf89plh86sgxfrcrhx1m908", - "depends": ["dplyr", "iMRMC", "magrittr", "mvtnorm", "Rcpp"] + "depends": ["Rcpp", "dplyr", "iMRMC", "magrittr", "mvtnorm"] }, "NestedCategBayesImpute": { "name": "NestedCategBayesImpute", "version": "1.2.1", "sha256": "15j54whvhqy26v1iikpk8ys75d7m5b188ggdzrlgzhjg0f9j45fl", - "depends": ["coda", "dplyr", "Rcpp", "RcppParallel"] + "depends": ["Rcpp", "RcppParallel", "coda", "dplyr"] }, "NestedMenu": { "name": "NestedMenu", @@ -21257,7 +21479,7 @@ "name": "NetFACS", "version": "0.5.0", "sha256": "05lqfawirdw4fh0hawm815hjdpyli7025dz3a5fsm6jh3l906z9i", - "depends": ["arrangements", "doParallel", "dplyr", "ggplot2", "ggraph", "igraph", "magrittr", "patchwork", "picante", "Rfast", "rlang", "tibble", "tidygraph", "tidyr", "vctrs"] + "depends": ["Rfast", "arrangements", "doParallel", "dplyr", "ggplot2", "ggraph", "igraph", "magrittr", "patchwork", "picante", "rlang", "tibble", "tidygraph", "tidyr", "vctrs"] }, "NetIndices": { "name": "NetIndices", @@ -21281,13 +21503,13 @@ "name": "NetMix", "version": "0.2.0.2", "sha256": "1j45zxlirlsph411k76vzawd2zg9bldfp2r9z4pi5zdk129fprb5", - "depends": ["clue", "gtools", "igraph", "lda", "MASS", "Matrix", "poisbinom", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "clue", "gtools", "igraph", "lda", "poisbinom"] }, "NetOrigin": { "name": "NetOrigin", "version": "1.1-6", "sha256": "0brjg6w79r6bkga9dpqph9l7k6wq5hvsjfhrwx7dnyr437f7z4hk", - "depends": ["colorspace", "corpcor", "dplyr", "Hmisc", "igraph", "mvtnorm", "plyr", "tibble"] + "depends": ["Hmisc", "colorspace", "corpcor", "dplyr", "igraph", "mvtnorm", "plyr", "tibble"] }, "NetPreProc": { "name": "NetPreProc", @@ -21299,13 +21521,13 @@ "name": "NetRep", "version": "1.2.7", "sha256": "02ss45giv30pi31b5rysa36bn5c4fs5x58g4vb0arz9cnicznv97", - "depends": ["abind", "BH", "foreach", "RColorBrewer", "Rcpp", "RcppArmadillo", "RhpcBLASctl", "statmod"] + "depends": ["BH", "RColorBrewer", "Rcpp", "RcppArmadillo", "RhpcBLASctl", "abind", "foreach", "statmod"] }, "NetSimR": { "name": "NetSimR", "version": "0.1.5", "sha256": "1ipxr7wqlxa6qk5hhhbkr274v7f0hb1zjndcjgsk4gmv7cl7w21j", - "depends": ["DBI", "fitdistrplus", "future", "future_apply", "MASS", "Pareto", "plotly", "rmarkdown", "RMySQL", "RODBC", "RPostgreSQL", "RSQLite", "scales", "shiny", "shinybusy", "shinyjs", "shinyWidgets"] + "depends": ["DBI", "MASS", "Pareto", "RMySQL", "RODBC", "RPostgreSQL", "RSQLite", "fitdistrplus", "future", "future_apply", "plotly", "rmarkdown", "scales", "shiny", "shinyWidgets", "shinybusy", "shinyjs"] }, "NetSwan": { "name": "NetSwan", @@ -21323,7 +21545,7 @@ "name": "NetworkChange", "version": "0.8", "sha256": "03rzyfiwbqpr4jj3wdg3s1gnfizz39j07yk0q2fkq3a8pfx4w306", - "depends": ["abind", "GGally", "ggplot2", "ggrepel", "ggvis", "gridExtra", "igraph", "MASS", "MCMCpack", "mvtnorm", "network", "qgraph", "RColorBrewer", "reshape", "rlang", "Rmpfr", "tidyr"] + "depends": ["GGally", "MASS", "MCMCpack", "RColorBrewer", "Rmpfr", "abind", "ggplot2", "ggrepel", "ggvis", "gridExtra", "igraph", "mvtnorm", "network", "qgraph", "reshape", "rlang", "tidyr"] }, "NetworkComparisonTest": { "name": "NetworkComparisonTest", @@ -21341,37 +21563,37 @@ "name": "NetworkDistance", "version": "0.3.4", "sha256": "0z3q15aq5jqwbyxr4464nq74ib7644f185h8wfzvfi491xkrl4cr", - "depends": ["doParallel", "foreach", "graphon", "igraph", "Matrix", "network", "pracma", "Rcpp", "RcppArmadillo", "Rdpack", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "Rdpack", "doParallel", "foreach", "graphon", "igraph", "network", "pracma"] }, "NetworkExtinction": { "name": "NetworkExtinction", "version": "1.0.3", "sha256": "1y2f715y077bwj8ymamrskwhbc7adg7q9ijkks2yr2gwj8i47xy4", - "depends": ["broom", "doParallel", "doSNOW", "dplyr", "foreach", "ggplot2", "igraph", "magrittr", "MASS", "network", "patchwork", "purrr", "rlang", "scales", "sna", "tidyr"] + "depends": ["MASS", "broom", "doParallel", "doSNOW", "dplyr", "foreach", "ggplot2", "igraph", "magrittr", "network", "patchwork", "purrr", "rlang", "scales", "sna", "tidyr"] }, "NetworkInference": { "name": "NetworkInference", "version": "1.2.4", "sha256": "1x63szbns8wf3k89ibk2p66prngw4fr2ckfn1568mnxdwnzvhrb4", - "depends": ["assertthat", "checkmate", "ggplot2", "ggrepel", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "assertthat", "checkmate", "ggplot2", "ggrepel"] }, "NetworkReg": { "name": "NetworkReg", "version": "1.1", "sha256": "19z5m5hn2frqrfv3lymjwfy6b2vp6mfyanynzbb6g3xkafh6mnad", - "depends": ["Matrix", "randnet", "RSpectra"] + "depends": ["Matrix", "RSpectra", "randnet"] }, "NetworkRiskMeasures": { "name": "NetworkRiskMeasures", "version": "0.1.4", "sha256": "1121ma43jxc4p9rw0sc8w32shf9xrmn5qd1xsqgzr8diymc49zhg", - "depends": ["dplyr", "expm", "ggplot2", "Matrix"] + "depends": ["Matrix", "dplyr", "expm", "ggplot2"] }, "NetworkToolbox": { "name": "NetworkToolbox", "version": "1.4.2", "sha256": "026gizms1xsmlpzgssgqi2y5lfhvvbqkwy5q3a0d4xvzbmyan3y7", - "depends": ["corrplot", "doParallel", "fdrtool", "foreach", "igraph", "IsingFit", "MASS", "pbapply", "ppcor", "psych", "pwr", "qgraph", "R_matlab"] + "depends": ["IsingFit", "MASS", "R_matlab", "corrplot", "doParallel", "fdrtool", "foreach", "igraph", "pbapply", "ppcor", "psych", "pwr", "qgraph"] }, "NeuralNetTools": { "name": "NeuralNetTools", @@ -21383,13 +21605,13 @@ "name": "NeuralSens", "version": "1.1.3", "sha256": "0wd70qykzgsfz5pr05hjq5kcixz94787wm5qmh4nj7l8a5r01m76", - "depends": ["caret", "dplyr", "fastDummies", "ggbreak", "ggforce", "ggnewscale", "ggplot2", "ggrepel", "gridExtra", "Hmisc", "magrittr", "NeuralNetTools", "reshape2", "scales", "stringr"] + "depends": ["Hmisc", "NeuralNetTools", "caret", "dplyr", "fastDummies", "ggbreak", "ggforce", "ggnewscale", "ggplot2", "ggrepel", "gridExtra", "magrittr", "reshape2", "scales", "stringr"] }, "NeuroDecodeR": { "name": "NeuroDecodeR", "version": "0.2.0", "sha256": "1jylaw35q8c72j7r9mk2a03r0k46csm9qav00dd1axxifc9y7wyf", - "depends": ["doSNOW", "dplyr", "e1071", "forcats", "foreach", "ggplot2", "gridExtra", "magrittr", "purrr", "R_matlab", "scales", "stringr", "tibble", "tictoc", "tidyr"] + "depends": ["R_matlab", "doSNOW", "dplyr", "e1071", "forcats", "foreach", "ggplot2", "gridExtra", "magrittr", "purrr", "scales", "stringr", "tibble", "tictoc", "tidyr"] }, "Newdistns": { "name": "Newdistns", @@ -21413,7 +21635,7 @@ "name": "NicheBarcoding", "version": "1.0", "sha256": "16jkznc4624ww7vwid6f3m90wm2ds2c7zf1j1sw16dyrqmlyk9w3", - "depends": ["ape", "dismo", "e1071", "maps", "pROC", "randomForest", "raster", "rJava", "spider", "vegan"] + "depends": ["ape", "dismo", "e1071", "maps", "pROC", "rJava", "randomForest", "raster", "spider", "vegan"] }, "NightDay": { "name": "NightDay", @@ -21431,7 +21653,7 @@ "name": "NitrogenUptake2016", "version": "0.2.3", "sha256": "13mh63z3x8yqd31v5a4d10bhzk4y67ac38flwk2msv7qcx37sny6", - "depends": ["car", "MASS", "zoo"] + "depends": ["MASS", "car", "zoo"] }, "NlcOptim": { "name": "NlcOptim", @@ -21491,7 +21713,7 @@ "name": "NonProbEst", "version": "0.2.4", "sha256": "1w2ihnwwdnxlnphyd26261lsxaknpi51c15rmn9m183djz9gsvdv", - "depends": ["caret", "e1071", "glmnet", "Matrix", "sampling"] + "depends": ["Matrix", "caret", "e1071", "glmnet", "sampling"] }, "NonlinearTSA": { "name": "NonlinearTSA", @@ -21501,15 +21723,15 @@ }, "Nonpareil": { "name": "Nonpareil", - "version": "3.4.0", - "sha256": "130aags0pgry0d34mj1n4lavc8q43hls7c3jhmkr8k6vyg3ij372", + "version": "3.5.3", + "sha256": "1ih284darcb7y657xfm1zp1hzh3h8dj78n9q12gc0xpmwwffvp17", "depends": [] }, "NormData": { "name": "NormData", "version": "1.1", "sha256": "0v502sv5jpk644czq1d96qc4dw40j5hlvxy52ikjzhm89ri5gq9r", - "depends": ["car", "doBy", "dplyr", "lmtest", "MASS", "openxlsx", "sandwich"] + "depends": ["MASS", "car", "doBy", "dplyr", "lmtest", "openxlsx", "sandwich"] }, "NormExpression": { "name": "NormExpression", @@ -21533,7 +21755,7 @@ "name": "NormalityAssessment", "version": "0.1.0", "sha256": "0r9a51z614si3b45g01lfgapmgc4smjf2hylgy5kvq8w0yh0w5y6", - "depends": ["dplyr", "DT", "ggplot2", "rio", "rmatio", "shiny", "shinyalert", "shinyBS", "stringi", "stringr"] + "depends": ["DT", "dplyr", "ggplot2", "rio", "rmatio", "shiny", "shinyBS", "shinyalert", "stringi", "stringr"] }, "NostalgiR": { "name": "NostalgiR", @@ -21587,7 +21809,7 @@ "name": "OBASpatial", "version": "1.9", "sha256": "13jx5f5piii9cys7xyhfwilyg87zsi632fscy8902mlhbgg7abkp", - "depends": ["cubature", "HDInterval", "invgamma", "LaplacesDemon", "modeest", "mvtnorm", "truncdist"] + "depends": ["HDInterval", "LaplacesDemon", "cubature", "invgamma", "modeest", "mvtnorm", "truncdist"] }, "OBIC": { "name": "OBIC", @@ -21623,7 +21845,7 @@ "name": "OCNet", "version": "1.2.2", "sha256": "1ryb5jbz1dd4b9v45za6li1szdz8n9mmf3n3wx4ivqmcrnp2zqdh", - "depends": ["adespatial", "fields", "igraph", "Rcpp", "rgl", "spam", "spdep", "terra"] + "depends": ["Rcpp", "adespatial", "fields", "igraph", "rgl", "spam", "spdep", "terra"] }, "OCSdata": { "name": "OCSdata", @@ -21647,7 +21869,7 @@ "name": "ODEsensitivity", "version": "1.1.2", "sha256": "0yddv5h3y0xfviqjgrbixawd00jc1rh9ngckfqka5j855vhchh66", - "depends": ["checkmate", "deSolve", "ODEnetwork", "sensitivity"] + "depends": ["ODEnetwork", "checkmate", "deSolve", "sensitivity"] }, "ODMeans": { "name": "ODMeans", @@ -21659,7 +21881,7 @@ "name": "ODRF", "version": "0.0.4", "sha256": "017z7yr4r864cxvqyn14fxgmc2rgq01c95sbcmp6qg8dj03bcz53", - "depends": ["doParallel", "foreach", "glue", "lifecycle", "magrittr", "nnet", "partykit", "Pursuit", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Pursuit", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "glue", "lifecycle", "magrittr", "nnet", "partykit", "rlang"] }, "ODS": { "name": "ODS", @@ -21671,7 +21893,7 @@ "name": "ODataQuery", "version": "0.5.3", "sha256": "058j3rc5kh134ndsxn5gck2xh6llrs73cyxpa5z8zkmsw9am22qj", - "depends": ["httr", "jsonlite", "R6", "rlang"] + "depends": ["R6", "httr", "jsonlite", "rlang"] }, "OECD": { "name": "OECD", @@ -21683,7 +21905,7 @@ "name": "OEFPIL", "version": "0.1.1", "sha256": "0gnbbz2spaqlqqn7978l15jv7xiqpfrh8k9girrpdqih02x95rfw", - "depends": ["Deriv", "ggplot2", "MASS", "matrixcalc", "minpack_lm", "plyr"] + "depends": ["Deriv", "MASS", "ggplot2", "matrixcalc", "minpack_lm", "plyr"] }, "OGI": { "name": "OGI", @@ -21699,8 +21921,8 @@ }, "OHPL": { "name": "OHPL", - "version": "1.4", - "sha256": "0svim112khdymdj1bsj8vri6r0zph5312y148mlh5h98rah40i08", + "version": "1.4.1", + "sha256": "1bcg97lgjs00xka2k5k8kdnc42vz10g78cb9mh5jz2g58iamjzbk", "depends": ["glmnet", "mvtnorm", "pls"] }, "OLCPM": { @@ -21753,21 +21975,21 @@ }, "OPI": { "name": "OPI", - "version": "2.11.2", - "sha256": "0r1v1l04y39w5p99szwhrh1n0vjvk99pdnrc4c72rvlzcaq11zzx", - "depends": ["abind", "openssl", "Rfast"] + "version": "3.0.2", + "sha256": "19fgfkd8zf8r7cqmkqvhzkv8lwnbg33cvm8kapqp7sb6g4i3qk1x", + "depends": ["Rfast", "abind", "jsonlite", "openssl"] }, "OPTS": { "name": "OPTS", "version": "0.1", "sha256": "0h382gcjq2f4qm63xnqvhjvxyn9w01dzx8964fk6cm2izhw04bk2", - "depends": ["changepoint", "cvTools", "MASS"] + "depends": ["MASS", "changepoint", "cvTools"] }, "OPTtesting": { "name": "OPTtesting", "version": "1.0.0", "sha256": "1d5pkvrzz5hvr764kyliyba5mgix9y340gdcvc0d0si41rz12r91", - "depends": ["quantreg", "rootSolve", "RSpectra"] + "depends": ["RSpectra", "quantreg", "rootSolve"] }, "ORCME": { "name": "ORCME", @@ -21791,7 +22013,13 @@ "name": "ORION", "version": "1.0.3", "sha256": "0zzlvx1yd3hy8dy7nbmkj7d2k6609ys91s894qcgx5n7jirqviy3", - "depends": ["doParallel", "e1071", "foreach", "igraph", "knitr", "randomForest", "rmarkdown", "TunePareto"] + "depends": ["TunePareto", "doParallel", "e1071", "foreach", "igraph", "knitr", "randomForest", "rmarkdown"] + }, + "ORIONZ_G": { + "name": "ORIONZ.G", + "version": "1.0.1", + "sha256": "05223qkvqpr1nr7jxznin11jcyapzp76p47xqhl1jr1hif3akvrb", + "depends": [] }, "ORKM": { "name": "ORKM", @@ -21821,25 +22049,25 @@ "name": "OSFD", "version": "1.0", "sha256": "1xw76hi34vgq1r6r22z4bqp114nzg4h85mvz6pya724vyf110vhg", - "depends": ["dplyr", "lhs", "Rcpp", "RcppArmadillo", "twinning"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "lhs", "twinning"] }, "OSLdecomposition": { "name": "OSLdecomposition", "version": "1.0.0", "sha256": "0xz27p4wd1a5y8x24sqgpyvgdwi2dzk4qh2s50xrdr82prb2znkv", - "depends": ["DEoptim", "ggplot2", "ggpubr", "gridExtra", "Luminescence", "minpack_lm", "rmarkdown", "scales"] + "depends": ["DEoptim", "Luminescence", "ggplot2", "ggpubr", "gridExtra", "minpack_lm", "rmarkdown", "scales"] }, "OSMscale": { "name": "OSMscale", "version": "0.5.20", "sha256": "14n5574j083xllj0xs87cl8szc0favb8wp3v10bbdljbk35qvmbm", - "depends": ["berryFunctions", "OpenStreetMap", "pbapply", "sf"] + "depends": ["OpenStreetMap", "berryFunctions", "pbapply", "sf"] }, "OSNMTF": { "name": "OSNMTF", "version": "0.1.0", "sha256": "0g83wqh97iz3g4ganj2dy3biyn8cmb0v8zz6rydald1hfszj8aa2", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "OSTE": { "name": "OSTE", @@ -21875,19 +22103,19 @@ "name": "OTclust", "version": "1.0.6", "sha256": "00609z2fp3ijqid7yjgh045xz038h5jl7i1k2kww3kfpcf40mhzs", - "depends": ["class", "ggplot2", "magrittr", "RColorBrewer", "Rcpp"] + "depends": ["RColorBrewer", "Rcpp", "class", "ggplot2", "magrittr"] }, "OTrecod": { "name": "OTrecod", "version": "0.1.2", "sha256": "1w3w6vsp5v2sccpn0zzjiwcnwmgcindh7wnsnf90qprvjwlys7mw", - "depends": ["dplyr", "FactoMineR", "mice", "missMDA", "ompr", "ompr_roi", "party", "plyr", "proxy", "rdist", "ROI", "ROI_plugin_glpk", "StatMatch", "vcd"] + "depends": ["FactoMineR", "ROI", "ROI_plugin_glpk", "StatMatch", "dplyr", "mice", "missMDA", "ompr", "ompr_roi", "party", "plyr", "proxy", "rdist", "vcd"] }, "OUwie": { "name": "OUwie", "version": "2.10", "sha256": "19bh0vb7azxpzrjw2829gcjcq91fnzb5ybhkp3fsvg9xccmjq9dg", - "depends": ["ape", "corpcor", "geiger", "igraph", "interp", "lhs", "nloptr", "numDeriv", "paleotree", "phangorn", "phylolm", "phytools", "RColorBrewer"] + "depends": ["RColorBrewer", "ape", "corpcor", "geiger", "igraph", "interp", "lhs", "nloptr", "numDeriv", "paleotree", "phangorn", "phylolm", "phytools"] }, "OVL_CI": { "name": "OVL.CI", @@ -21899,13 +22127,13 @@ "name": "OVtool", "version": "1.0.3", "sha256": "1ghfbvnfl092g0kikgjghgf0l1y7ihqykssfvvfi6q6pgzl8kz4y", - "depends": ["Amelia", "devtools", "dplyr", "EnvStats", "ggplot2", "ggrepel", "glue", "magrittr", "metR", "progress", "purrr", "rlang", "survey", "tibble", "tidyselect", "twang", "varhandle"] + "depends": ["Amelia", "EnvStats", "devtools", "dplyr", "ggplot2", "ggrepel", "glue", "magrittr", "metR", "progress", "purrr", "rlang", "survey", "tibble", "tidyselect", "twang", "varhandle"] }, "OWEA": { "name": "OWEA", "version": "0.1.2", "sha256": "05h3aj074manlwnlzqp023zkql6gmsm9p1nfs6zki7ifdd83wj7m", - "depends": ["gtools", "MASS", "shiny"] + "depends": ["MASS", "gtools", "shiny"] }, "Oarray": { "name": "Oarray", @@ -21951,8 +22179,8 @@ }, "OlinkAnalyze": { "name": "OlinkAnalyze", - "version": "3.7.0", - "sha256": "0rj57ipm2lk11ysscgqaa38hgysyxr9nb5zvp17kxf5cla17dskc", + "version": "3.8.2", + "sha256": "0i8bpx3baq6x2hkk2zf45yxjk4mzhrw6wbksw1z1w11hghyld6vs", "depends": ["broom", "car", "dplyr", "emmeans", "forcats", "generics", "ggplot2", "ggpubr", "ggrepel", "lme4", "lmerTest", "magrittr", "readxl", "rlang", "rstatix", "stringr", "tibble", "tidyr", "tidyselect", "zip"] }, "OlympicRshiny": { @@ -21971,7 +22199,7 @@ "name": "OmicKriging", "version": "1.4.0", "sha256": "08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig", - "depends": ["doParallel", "foreach", "irlba", "ROCR"] + "depends": ["ROCR", "doParallel", "foreach", "irlba"] }, "OmicNavigator": { "name": "OmicNavigator", @@ -22001,7 +22229,7 @@ "name": "Omisc", "version": "0.1.5", "sha256": "0p0iraascyx16y05rpc2c9k25s4crc0wrxy58dpj7jd47g2360ar", - "depends": ["copula", "MASS", "psych"] + "depends": ["MASS", "copula", "psych"] }, "OmnibusFisher": { "name": "OmnibusFisher", @@ -22025,13 +22253,13 @@ "name": "OncoBayes2", "version": "0.8-9", "sha256": "06k0lbriyx6b1nlvpyjhf5g8dp8wa37wi1pmlpfqq7ryivp39v38", - "depends": ["abind", "assertthat", "bayesplot", "BH", "checkmate", "dplyr", "Formula", "ggplot2", "matrixStats", "posterior", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "scales", "StanHeaders", "tibble", "tidyr", "tidyselect"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "abind", "assertthat", "bayesplot", "checkmate", "dplyr", "ggplot2", "matrixStats", "posterior", "rlang", "rstan", "rstantools", "scales", "tibble", "tidyr", "tidyselect"] }, "OncoSubtype": { "name": "OncoSubtype", "version": "1.0.0", "sha256": "12d32i8q4j0hlkxlk6s8r5ycib6lx5jdsp8g404zmjrsd96aadr2", - "depends": ["caret", "dplyr", "e1071", "limma", "pheatmap", "randomForest", "Rdpack", "rlang", "SummarizedExperiment", "tibble"] + "depends": ["Rdpack", "SummarizedExperiment", "caret", "dplyr", "e1071", "limma", "pheatmap", "randomForest", "rlang", "tibble"] }, "Oncofilterfast": { "name": "Oncofilterfast", @@ -22047,15 +22275,15 @@ }, "One4All": { "name": "One4All", - "version": "0.4", - "sha256": "1f0gymlpdyz9dm71mj99cyp58c1nwxr8d4g9c976mf5mimz2rhyn", + "version": "0.5", + "sha256": "081d40n8whvhykzdpm2crwmpr3mlczd6svhcpr48nxdhh56pyhjf", "depends": ["aws_s3", "ckanr", "data_table", "digest", "dplyr", "httr", "jsonlite", "lexicon", "mongolite", "openxlsx", "readr", "readxl", "rlang", "shiny", "tibble", "validate"] }, "OneArm2stage": { "name": "OneArm2stage", "version": "1.2.1", "sha256": "040yv2bl6s7b1bgma7z1hgrsj8iynzayjc77ncp401nd1ng5wmw5", - "depends": ["flexsurv", "IPDfromKM", "survival"] + "depends": ["IPDfromKM", "flexsurv", "survival"] }, "OneArmTTE": { "name": "OneArmTTE", @@ -22077,9 +22305,9 @@ }, "OneSampleMR": { "name": "OneSampleMR", - "version": "0.1.4", - "sha256": "11wcrmhibr02wbkdw77imcjancfdfzcqkz6wfjiiydx3hsksymck", - "depends": ["ellipsis", "Formula", "gmm", "ivreg", "lmtest", "msm"] + "version": "0.1.5", + "sha256": "1swjc1gsddihdcx9c219vzh9xn379fp8jlvvs5jhikixkk1frqdq", + "depends": ["Formula", "gmm", "ivreg", "lmtest", "msm", "rlang"] }, "OneStep": { "name": "OneStep", @@ -22103,7 +22331,7 @@ "name": "OpEnHiMR", "version": "0.1.1", "sha256": "0wgjihdfjvsf3p97ll496ixwv2xzlgsr138pzgalw5hq0p1kmld6", - "depends": ["Biostrings", "caret", "devtools", "dplyr", "e1071", "entropy", "ftrCOOL", "gbm", "party", "randomForest", "RCurl", "seqinr", "splitstackshape", "stringr", "tidyverse"] + "depends": ["Biostrings", "RCurl", "caret", "devtools", "dplyr", "e1071", "entropy", "ftrCOOL", "gbm", "party", "randomForest", "seqinr", "splitstackshape", "stringr", "tidyverse"] }, "OpenCL": { "name": "OpenCL", @@ -22115,7 +22343,7 @@ "name": "OpenImageR", "version": "1.3.0", "sha256": "0j15kwhjazr35yqs9lhw0pfqmrd9rm75gs160dn3xcyc3nw2is56", - "depends": ["jpeg", "lifecycle", "png", "R6", "Rcpp", "RcppArmadillo", "shiny", "tiff"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "jpeg", "lifecycle", "png", "shiny", "tiff"] }, "OpenLand": { "name": "OpenLand", @@ -22127,7 +22355,7 @@ "name": "OpenML", "version": "1.12", "sha256": "0ij4mnbfkckidv9f414fclyhrbbkgmpz5zsjiqa3zlckr3pfaxg7", - "depends": ["backports", "BBmisc", "checkmate", "curl", "data_table", "digest", "httr", "jsonlite", "memoise", "stringi", "XML"] + "depends": ["BBmisc", "XML", "backports", "checkmate", "curl", "data_table", "digest", "httr", "jsonlite", "memoise", "stringi"] }, "OpenMindat": { "name": "OpenMindat", @@ -22137,21 +22365,21 @@ }, "OpenMx": { "name": "OpenMx", - "version": "2.21.11", - "sha256": "1k3i82higil43w4pryg1ghpswa8vxmc28dcv60gvkmmjrnwp098m", - "depends": ["BH", "digest", "lifecycle", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "rpf", "StanHeaders"] + "version": "2.21.12", + "sha256": "13jgm9ps4ak30ri61az8c5w4j36k77dq4gsbc0v66ydx3ciyf1n7", + "depends": ["BH", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "digest", "lifecycle", "rpf"] }, "OpenRepGrid": { "name": "OpenRepGrid", - "version": "0.1.14", - "sha256": "1gy06cyjb50673jb9548c9v37im4hsm245r7rwhx280q9fsn17ws", - "depends": ["abind", "colorspace", "crayon", "dplyr", "igraph", "openxlsx", "plyr", "psych", "pvclust", "rgl", "scales", "stringr", "tidyr", "XML"] + "version": "0.1.15", + "sha256": "0sdqz9bhwfqcpggd2yw4inlfzn4qkzv1vxnri6mxqmjpkb7arysw", + "depends": ["XML", "abind", "colorspace", "crayon", "dplyr", "igraph", "openxlsx", "plyr", "psych", "pvclust", "scales", "stringr", "tidyr"] }, "OpenRepGrid_ic": { "name": "OpenRepGrid.ic", "version": "0.6.2", "sha256": "1v8sqlid97xnp0nddn4yr6im8zah1pclirvmz1n7qmc91656plx6", - "depends": ["dplyr", "DT", "formattable", "igraph", "magrittr", "openxlsx", "RColorBrewer", "reshape2", "rintrojs", "scales", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyFeedback", "shinyjs", "shinythemes", "shinyWidgets", "stringr", "tidyr", "tidyverse", "withr"] + "depends": ["DT", "RColorBrewer", "dplyr", "formattable", "igraph", "magrittr", "openxlsx", "reshape2", "rintrojs", "scales", "shiny", "shinyBS", "shinyFeedback", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "shinythemes", "stringr", "tidyr", "tidyverse", "withr"] }, "OpenSpecy": { "name": "OpenSpecy", @@ -22163,7 +22391,7 @@ "name": "OpenStreetMap", "version": "0.4.0", "sha256": "0iq3y3331rjppc8nfx9krrrfybyn1spwfp15hf3vz8mnmcg86dkf", - "depends": ["ggplot2", "raster", "rJava", "sp"] + "depends": ["ggplot2", "rJava", "raster", "sp"] }, "OpenTreeChronograms": { "name": "OpenTreeChronograms", @@ -22181,13 +22409,13 @@ "name": "Opt5PL", "version": "0.1.1", "sha256": "0v3ibfzmkfnkhxylhaqcd3yqygsk7027ga12vb6gj4h4zcccf17f", - "depends": ["matrixcalc", "Rcpp"] + "depends": ["Rcpp", "matrixcalc"] }, "OptCirClust": { "name": "OptCirClust", "version": "0.0.4", "sha256": "0g34kn2gmvy9r4ph0vbssc9gl8bcpw6d72b8zpf38iml4zh52b0n", - "depends": ["Ckmeans_1d_dp", "plotrix", "Rcpp", "Rdpack", "reshape2"] + "depends": ["Ckmeans_1d_dp", "Rcpp", "Rdpack", "plotrix", "reshape2"] }, "OptGS": { "name": "OptGS", @@ -22219,12 +22447,6 @@ "sha256": "0fdszrblayi2hlmkgvwqxw1fh5nh2jad6sxlc788jrzjrd8nkldj", "depends": ["pwr"] }, - "OptiSembleForecasting": { - "name": "OptiSembleForecasting", - "version": "0.1.0", - "sha256": "0j1xjh59iyb99p73wjvqr8yrsj6yplsl2rrx50bds9ksjbq1qmym", - "depends": ["caretForecast", "dplyr", "factoextra", "FactoMineR", "forecast", "keras", "kknn", "MCS", "metaheuristicOpt", "Metrics", "neuralnet", "readxl", "tensorflow", "tibble", "tsutils"] - }, "OptimModel": { "name": "OptimModel", "version": "2.0-1", @@ -22235,7 +22457,7 @@ "name": "OptimaRegion", "version": "1.2", "sha256": "01nbisv45amv5pfnl0hmbc751qjkjvw8xsva50q8ypm02p2jw07f", - "depends": ["boot", "DepthProc", "fields", "magrittr", "nloptr", "Rdpack", "Rdsdp", "rsm", "spam", "stringr"] + "depends": ["DepthProc", "Rdpack", "Rdsdp", "boot", "fields", "magrittr", "nloptr", "rsm", "spam", "stringr"] }, "OptimalCutpoints": { "name": "OptimalCutpoints", @@ -22247,19 +22469,19 @@ "name": "OptimalDesign", "version": "1.0.1", "sha256": "02vxxb25q7fl73y7zq0a89ra0s88wji4mrql7p88014p073lj2as", - "depends": ["lpSolve", "Matrix", "matrixcalc", "matrixStats", "plyr", "quadprog", "rgl"] + "depends": ["Matrix", "lpSolve", "matrixStats", "matrixcalc", "plyr", "quadprog", "rgl"] }, "OptimalGoldstandardDesigns": { "name": "OptimalGoldstandardDesigns", "version": "1.0.1", "sha256": "1rw3syj5wb1v8ryqc9vkchi62pf02460f5i5zapq2azgfg99l66y", - "depends": ["cli", "dplyr", "mvtnorm", "nloptr", "Rdpack", "tibble"] + "depends": ["Rdpack", "cli", "dplyr", "mvtnorm", "nloptr", "tibble"] }, "OptimalRerandExpDesigns": { "name": "OptimalRerandExpDesigns", "version": "1.1", "sha256": "033qwzglpzjk302dr19yak34j2k19k6vihd3vlj9c8xsiikmrfmj", - "depends": ["ggplot2", "GreedyExperimentalDesign", "momentchi2"] + "depends": ["GreedyExperimentalDesign", "ggplot2", "momentchi2"] }, "OptimalSurrogate": { "name": "OptimalSurrogate", @@ -22289,19 +22511,19 @@ "name": "Orcs", "version": "1.2.3", "sha256": "0b2h0vyvp6hnp9i03c8yxfhrlbdq0akdlw2ik0k5c09wfiq7amq6", - "depends": ["bookdown", "knitr", "lattice", "latticeExtra", "plotrix", "Rcpp", "remotes", "sf", "sp", "terra"] + "depends": ["Rcpp", "bookdown", "knitr", "lattice", "latticeExtra", "plotrix", "remotes", "sf", "sp", "terra"] }, "OrdCD": { "name": "OrdCD", "version": "1.1.2", "sha256": "1wg4sxirzp8r91qzzvrx4yashg1f574ayaxbviy8hdca3iydfl1j", - "depends": ["bnlearn", "gRbase", "igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "bnlearn", "gRbase", "igraph"] }, "OrdFacReg": { "name": "OrdFacReg", "version": "1.0.6", "sha256": "16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv", - "depends": ["eha", "MASS", "survival"] + "depends": ["MASS", "eha", "survival"] }, "OrdMonReg": { "name": "OrdMonReg", @@ -22313,7 +22535,7 @@ "name": "OrdNor", "version": "2.2.3", "sha256": "0yjvylp8z24w6nbwy9rjyk0y7gpzsxzsqm8x4q4fn8g87cb3314v", - "depends": ["corpcor", "GenOrd", "Matrix", "mvtnorm"] + "depends": ["GenOrd", "Matrix", "corpcor", "mvtnorm"] }, "OrgMassSpecR": { "name": "OrgMassSpecR", @@ -22321,6 +22543,12 @@ "sha256": "1dx9d8rb1dfqyhyc26zhfnxiv3rz2ikvs2mwqnsrq3lsjs9dvyc8", "depends": [] }, + "OrigamiPlot": { + "name": "OrigamiPlot", + "version": "0.1.0", + "sha256": "1p2fzv8bx3pxhskf1h9b6mk72b15g0l0ribp4da1vq58xn9cjgil", + "depends": ["fmsb", "plotrix"] + }, "OrthoPanels": { "name": "OrthoPanels", "version": "1.2-4", @@ -22349,7 +22577,7 @@ "name": "Ostats", "version": "0.2.0", "sha256": "0d2qk76issb2k5f2ghfvpq0k8ra7d7nj9hp4ja1s0817zwr0g3zz", - "depends": ["circular", "ggplot2", "gridExtra", "hypervolume", "MASS", "matrixStats", "sfsmisc", "viridis"] + "depends": ["MASS", "circular", "ggplot2", "gridExtra", "hypervolume", "matrixStats", "sfsmisc", "viridis"] }, "OutliersLearn": { "name": "OutliersLearn", @@ -22361,7 +22589,7 @@ "name": "OutliersO3", "version": "0.6.3", "sha256": "165v572w9bnvay9f0xyxzbhgj1i86ndia4rzqy98i48dfdbdb990", - "depends": ["cellWise", "dplyr", "FastPCS", "forcats", "GGally", "ggplot2", "HDoutliers", "memisc", "rlist", "robustbase", "robustX", "tidyr"] + "depends": ["FastPCS", "GGally", "HDoutliers", "cellWise", "dplyr", "forcats", "ggplot2", "memisc", "rlist", "robustX", "robustbase", "tidyr"] }, "OwenQ": { "name": "OwenQ", @@ -22379,31 +22607,31 @@ "name": "PAC", "version": "1.1.4", "sha256": "0h7381mr3jgzl7fi6v7amgmkf5agpkgy068c6ysgh3adlwsh6gs6", - "depends": ["dplyr", "ggplot2", "ggrepel", "igraph", "infotheo", "parmigene", "Rcpp", "Rtsne"] + "depends": ["Rcpp", "Rtsne", "dplyr", "ggplot2", "ggrepel", "igraph", "infotheo", "parmigene"] }, "PACLasso": { "name": "PACLasso", "version": "1.0.0", "sha256": "1qzzymhfsjy8mk0r0xpd5h4wrx4wk8gq3vi6fnawkq5xkrg26rld", - "depends": ["lars", "limSolve", "MASS", "penalized", "quadprog"] + "depends": ["MASS", "lars", "limSolve", "penalized", "quadprog"] }, "PACVr": { "name": "PACVr", "version": "1.0.11", "sha256": "0wj32rghf040539z6lld4zspyalz3c4ag1syr940arvilvyv5wav", - "depends": ["Biostrings", "dplyr", "GenomicAlignments", "GenomicRanges", "IRanges", "logger", "R6", "RCircos", "read_gb", "tidyr"] + "depends": ["Biostrings", "GenomicAlignments", "GenomicRanges", "IRanges", "R6", "RCircos", "dplyr", "logger", "read_gb", "tidyr"] }, "PAFit": { "name": "PAFit", "version": "1.2.10", "sha256": "10p2q90jbjyzbvn8kgx1i8if144gq2zylqh8h3x4sg2ajqbcv8kg", - "depends": ["ggplot2", "igraph", "knitr", "magicaxis", "mapproj", "MASS", "network", "networkDynamic", "plyr", "RColorBrewer", "Rcpp", "VGAM"] + "depends": ["MASS", "RColorBrewer", "Rcpp", "VGAM", "ggplot2", "igraph", "knitr", "magicaxis", "mapproj", "network", "networkDynamic", "plyr"] }, "PAGFL": { "name": "PAGFL", - "version": "1.1.0", - "sha256": "1dh3hdrr5dhs7azvcn1r6lgyy2sqkr0nfzkcf2sh0vm6zxz85ssy", - "depends": ["ggplot2", "lifecycle", "Rcpp", "RcppArmadillo", "RcppParallel"] + "version": "1.1.1", + "sha256": "0as4azrg4hmh5slljjasvq248r0qylvgyqcz1myfxgja9lpzd604", + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2", "lifecycle"] }, "PAGWAS": { "name": "PAGWAS", @@ -22413,33 +22641,33 @@ }, "PAICE": { "name": "PAICE", - "version": "1.0.1", - "sha256": "1qnyg5p62xryifjnbc2z5yxy4s5fszxf713cgaisds96wjqvzx8a", + "version": "1.0.2", + "sha256": "04zqyi5zvigg21pa4mqz948gxiqixc8j12n47c1ndjsd2ras98wb", "depends": [] }, "PAMhm": { "name": "PAMhm", "version": "0.1.2", "sha256": "0k0n3ni0ypcizri39v76x1vv7hlxlmbpfi7w81yxy9inz7zz4zfw", - "depends": ["cluster", "heatmapFlex", "plyr", "R_utils", "RColorBrewer", "readmoRe", "readxl", "robustHD"] + "depends": ["RColorBrewer", "R_utils", "cluster", "heatmapFlex", "plyr", "readmoRe", "readxl", "robustHD"] }, "PAMmisc": { "name": "PAMmisc", "version": "1.12.1", "sha256": "0xv4bm1gzvhybgaww24nikwcbn8wq8299gbr1n831gscnzablzp3", - "depends": ["dplyr", "fftw", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "ncdf4", "PamBinaries", "purrr", "RcppRoll", "rerddap", "rjson", "RSQLite", "scales", "seewave", "signal", "suncalc", "tuneR", "xml2"] + "depends": ["PamBinaries", "RSQLite", "RcppRoll", "dplyr", "fftw", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "ncdf4", "purrr", "rerddap", "rjson", "scales", "seewave", "signal", "suncalc", "tuneR", "xml2"] }, "PAMpal": { "name": "PAMpal", - "version": "1.0.0", - "sha256": "0mr4c7ckw05mh5lmr0qhpas98122yn257gip6w2hwrcyziy5sc4v", - "depends": ["data_table", "dplyr", "gam", "geosphere", "ggplot2", "knitr", "lubridate", "manipulate", "PamBinaries", "PAMmisc", "purrr", "reticulate", "rlang", "RSQLite", "seewave", "signal", "stringr", "tidyr", "tuneR", "xml2"] + "version": "1.2.1", + "sha256": "1jb89rl1apb1nb1yfhq0knqkw7n6jcb2l4aqq61qy28iwl7vanr5", + "depends": ["PAMmisc", "PamBinaries", "RSQLite", "data_table", "dplyr", "gam", "geosphere", "ggplot2", "knitr", "lubridate", "purrr", "reticulate", "rlang", "seewave", "shiny", "signal", "tidyr", "tuneR", "xml2"] }, "PAMscapes": { "name": "PAMscapes", - "version": "0.5.8", - "sha256": "094084w6zamchzh6fwcgy839brq28vqkji2p335bpni9dfkz3cd5", - "depends": ["data_table", "dplyr", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "ncdf4", "PAMmisc", "purrr", "readr", "rlang", "scales", "sf", "tdigest", "tidyr"] + "version": "0.6.0", + "sha256": "0w8jrlr4j6fagzgqksbcrxn7zjqkwh4f5vaf958r48k8y6nfqpih", + "depends": ["PAMmisc", "data_table", "dplyr", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "ncdf4", "purrr", "readr", "rlang", "scales", "sf", "tdigest", "tidyr"] }, "PANACEA": { "name": "PANACEA", @@ -22451,7 +22679,7 @@ "name": "PANPRSnext", "version": "1.2.0", "sha256": "1s9kv58af7hj65qxcnrsfjrh8xfqhm5m4kpg279li5b4g4cpnqx9", - "depends": ["gtools", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "gtools"] }, "PAS": { "name": "PAS", @@ -22469,7 +22697,7 @@ "name": "PASWR", "version": "1.3", "sha256": "1p4896r4k6c0aaag4mwds2azp41amf726c4v62zca92cpsay4nml", - "depends": ["e1071", "lattice", "MASS"] + "depends": ["MASS", "e1071", "lattice"] }, "PASWR2": { "name": "PASWR2", @@ -22493,13 +22721,13 @@ "name": "PAsso", "version": "0.1.10", "sha256": "1qfwwgcra86x4469bqrv3jdm3vyvdiialfgfy184d1l5294pwv4x", - "depends": ["copBasic", "copula", "dplyr", "foreach", "GGally", "ggplot2", "gridExtra", "MASS", "pcaPP", "plotly", "progress", "Rcpp", "VGAM"] + "depends": ["GGally", "MASS", "Rcpp", "VGAM", "copBasic", "copula", "dplyr", "foreach", "ggplot2", "gridExtra", "pcaPP", "plotly", "progress"] }, "PBD": { "name": "PBD", "version": "1.4", "sha256": "1n8gq8ms6gszr469hblipbgalc5m7gfiknpsbqywxml62sr4wbsb", - "depends": ["ade4", "ape", "DDD", "deSolve", "phytools"] + "depends": ["DDD", "ade4", "ape", "deSolve", "phytools"] }, "PBIBD": { "name": "PBIBD", @@ -22517,7 +22745,7 @@ "name": "PBImisc", "version": "1.0", "sha256": "18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl", - "depends": ["lme4", "Matrix"] + "depends": ["Matrix", "lme4"] }, "PBNPA": { "name": "PBNPA", @@ -22559,7 +22787,13 @@ "name": "PCADSC", "version": "0.8.0", "sha256": "0pwkmmnsw3c6ch2k5wdc8ig71994pdp79v3a5aa9n9aq55a8c2ir", - "depends": ["ggplot2", "Matrix", "pander", "reshape2"] + "depends": ["Matrix", "ggplot2", "pander", "reshape2"] + }, + "PCAPAM50": { + "name": "PCAPAM50", + "version": "1.0.1", + "sha256": "09jmpw38q3j0yk27r54d3y6fbgh69a6712zklv8qrfyq59kkshnc", + "depends": ["Biobase", "ComplexHeatmap", "impute", "lattice"] }, "PCAmatchR": { "name": "PCAmatchR", @@ -22583,7 +22817,7 @@ "name": "PCDimension", "version": "1.1.13", "sha256": "0mpf7m4daqaip18yfsyanrmbjq4ib9fw1b65ajdazicm400bw6gb", - "depends": ["changepoint", "ClassDiscovery", "cpm", "kernlab", "oompaBase"] + "depends": ["ClassDiscovery", "changepoint", "cpm", "kernlab", "oompaBase"] }, "PCFAM": { "name": "PCFAM", @@ -22595,7 +22829,7 @@ "name": "PCGII", "version": "1.1.2", "sha256": "0bh37354qk2hj90f9l2908466bvwzjmxr70nyivhqkx2ffp5j42n", - "depends": ["corpcor", "dplyr", "glmnet", "igraph", "Matrix"] + "depends": ["Matrix", "corpcor", "dplyr", "glmnet", "igraph"] }, "PCGSE": { "name": "PCGSE", @@ -22631,13 +22865,13 @@ "name": "PCMBaseCpp", "version": "0.1.9", "sha256": "0k40mxs8w1vk7qwpkv8gnq6cq3kpj7wvf0i6f1qn1wmm2vvz1kfy", - "depends": ["abind", "data_table", "PCMBase", "Rcpp", "RcppArmadillo"] + "depends": ["PCMBase", "Rcpp", "RcppArmadillo", "abind", "data_table"] }, "PCMRS": { "name": "PCMRS", "version": "0.1-4", "sha256": "0bf85zv3nl13gsdi96cd2qg7mfppsccs0ci7l204hws8nmbvri83", - "depends": ["cubature", "ltm", "mvtnorm", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["Rcpp", "RcppArmadillo", "cubature", "ltm", "mvtnorm", "statmod"] }, "PCObw": { "name": "PCObw", @@ -22649,13 +22883,13 @@ "name": "PCPS", "version": "1.0.7", "sha256": "0gxymz0yws1q1bxkpxi0lmbv57xx62h3dl7z3i2cnbagswkax3zh", - "depends": ["ape", "nlme", "phylobase", "picante", "RcppArmadillo", "SYNCSA", "vegan"] + "depends": ["RcppArmadillo", "SYNCSA", "ape", "nlme", "phylobase", "picante", "vegan"] }, "PCRA": { "name": "PCRA", "version": "1.2", "sha256": "0nc7pfvy43drjhfgql7bxf93xlkaqg083hc5cvirya1blrx2m48j", - "depends": ["boot", "corpcor", "data_table", "lattice", "PerformanceAnalytics", "PortfolioAnalytics", "quadprog", "R_cache", "RobStatTM", "robustbase", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "PortfolioAnalytics", "R_cache", "RobStatTM", "boot", "corpcor", "data_table", "lattice", "quadprog", "robustbase", "xts", "zoo"] }, "PCS": { "name": "PCS", @@ -22723,6 +22957,12 @@ "sha256": "0s09sywvy83dj06rkxzyi06wfymwnfpgf3lpgjbb8ps8q3byd4vs", "depends": ["shiny"] }, + "PDXpower": { + "name": "PDXpower", + "version": "1.0.3", + "sha256": "0dpwc3wpsqm844lzlymanfi4pj7ajhqsqf025vx64j815j3q1122", + "depends": ["frailtypack", "ggplot2", "ggpubr", "nlme", "survival"] + }, "PDtoolkit": { "name": "PDtoolkit", "version": "1.2.0", @@ -22751,13 +22991,13 @@ "name": "PEIP", "version": "2.2-5", "sha256": "1xvwpsnyxnf3qi1hq5r7dx4bi4s03v53r0m979hyyzcc7w9fr5r5", - "depends": ["bvls", "fields", "geigen", "Matrix", "pracma", "RSEIS"] + "depends": ["Matrix", "RSEIS", "bvls", "fields", "geigen", "pracma"] }, "PELVIS": { "name": "PELVIS", "version": "2.0.4", "sha256": "0bn8zxw0lrc5bxm7iq216jnw35vr7zj2ajw0wn2rv7nx3zyd0r6z", - "depends": ["DT", "htmlwidgets", "MASS", "shiny"] + "depends": ["DT", "MASS", "htmlwidgets", "shiny"] }, "PEPBVS": { "name": "PEPBVS", @@ -22769,13 +23009,13 @@ "name": "PERK", "version": "0.0.9.2", "sha256": "0x62cmfl71s0mlhd22wifhfvhdvnz4ab6hzwinj549rvvrl8sw3j", - "depends": ["bs4Dash", "colourpicker", "config", "dplyr", "DT", "forcats", "ggplot2", "golem", "magrittr", "plotly", "readr", "shiny", "shinyjs", "shinyWidgets", "tibble", "tidyr", "viridis", "zoo"] + "depends": ["DT", "bs4Dash", "colourpicker", "config", "dplyr", "forcats", "ggplot2", "golem", "magrittr", "plotly", "readr", "shiny", "shinyWidgets", "shinyjs", "tibble", "tidyr", "viridis", "zoo"] }, "PERMANOVA": { "name": "PERMANOVA", "version": "0.2.0", "sha256": "1lmnp1g1i1kqa30cvakkl8g2m2h5jl73qx8dy37kv62mv0knlg5m", - "depends": ["deldir", "MASS", "Matrix", "scales", "xtable"] + "depends": ["MASS", "Matrix", "deldir", "scales", "xtable"] }, "PEkit": { "name": "PEkit", @@ -22793,7 +23033,13 @@ "name": "PFIM", "version": "6.0.3", "sha256": "0kp213ig73vj34qgwpc1zsnvz2hf8j0mjcqnsbb541s92zv2x4y7", - "depends": ["Deriv", "deSolve", "devtools", "ggplot2", "inline", "kableExtra", "knitr", "Matrix", "pracma", "Rcpp", "rmarkdown", "scales", "stringr"] + "depends": ["Deriv", "Matrix", "Rcpp", "deSolve", "devtools", "ggplot2", "inline", "kableExtra", "knitr", "pracma", "rmarkdown", "scales", "stringr"] + }, + "PFLR": { + "name": "PFLR", + "version": "1.0.0", + "sha256": "1iplycif2c9kaaxbibk1skbdnmsn0mxgbdj78lg8bgkf25gvzzii", + "depends": ["MASS", "fda", "flare", "glmnet", "psych"] }, "PGEE": { "name": "PGEE", @@ -22823,7 +23069,7 @@ "name": "PHENIX", "version": "1.3.1", "sha256": "1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4", - "depends": ["ppcor", "SuppDists"] + "depends": ["SuppDists", "ppcor"] }, "PHENTHAUproc": { "name": "PHENTHAUproc", @@ -22841,7 +23087,7 @@ "name": "PHInfiniteEstimates", "version": "2.9.5", "sha256": "1j00bb0jk912bkv6yhwnx1f2nr2bw72z9c5y4xby1mphljz059b7", - "depends": ["coxphf", "lpSolve", "nph", "Rdpack", "survival"] + "depends": ["Rdpack", "coxphf", "lpSolve", "nph", "survival"] }, "PHSMM": { "name": "PHSMM", @@ -22871,7 +23117,7 @@ "name": "PICBayes", "version": "1.0", "sha256": "1js6zrnyc8v345cds3pypb2g9dd3vvj3bjq159qc113m9ll2xk0b", - "depends": ["coda", "MCMCpack", "survival"] + "depends": ["MCMCpack", "coda", "survival"] }, "PINMA": { "name": "PINMA", @@ -22883,13 +23129,13 @@ "name": "PINSPlus", "version": "2.0.7", "sha256": "1r4fw3hm0bp3spxkcrwwcmirkp4a8myqwpw8d6cxmz7ns6202860", - "depends": ["cluster", "doParallel", "entropy", "FNN", "foreach", "impute", "irlba", "matrixStats", "mclust", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["FNN", "Rcpp", "RcppArmadillo", "RcppParallel", "cluster", "doParallel", "entropy", "foreach", "impute", "irlba", "matrixStats", "mclust"] }, "PINstimation": { "name": "PINstimation", "version": "0.1.2", "sha256": "0vys27ws0nk0bqf6pxgr689q3rnyx14ar560004g6pi0ii59mbyk", - "depends": ["coda", "dplyr", "furrr", "future", "knitr", "nloptr", "Rdpack", "rmarkdown", "skellam"] + "depends": ["Rdpack", "coda", "dplyr", "furrr", "future", "knitr", "nloptr", "rmarkdown", "skellam"] }, "PK": { "name": "PK", @@ -22911,15 +23157,15 @@ }, "PKNCA": { "name": "PKNCA", - "version": "0.10.2", - "sha256": "1imaj6a8y53hllhfxvmci4qh04pviw0zpwmxm12sqi1nl2kdb5y4", - "depends": ["checkmate", "digest", "dplyr", "nlme", "purrr", "rlang", "tibble", "tidyr"] + "version": "0.11.0", + "sha256": "1az62z5w9fydzbhzdlr0h1wzwby144vc7z0w907q3i43v3ziilb0", + "depends": ["checkmate", "digest", "dplyr", "lifecycle", "nlme", "purrr", "rlang", "tibble", "tidyr"] }, "PKPDsim": { "name": "PKPDsim", "version": "1.3.0", "sha256": "1n86zl8gka78anny7fj7l95bamckwkv5ijjiihpcfyj7fmac3y72", - "depends": ["BH", "data_table", "jsonlite", "magrittr", "MASS", "randtoolbox", "Rcpp", "stringr"] + "depends": ["BH", "MASS", "Rcpp", "data_table", "jsonlite", "magrittr", "randtoolbox", "stringr"] }, "PKconverter": { "name": "PKconverter", @@ -22943,7 +23189,7 @@ "name": "PLFD", "version": "0.2.0", "sha256": "0w6d3sy4cnn7sj5d2fbn510gc3y6hipd006jnyvkariaqwlh3fa0", - "depends": ["mathjaxr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mathjaxr"] }, "PLIS": { "name": "PLIS", @@ -22955,13 +23201,13 @@ "name": "PLMIX", "version": "2.1.1", "sha256": "05mnzsi7y71cvg50qx8hp4m31gqslldl34k41r1f8npyb6ldpdca", - "depends": ["abind", "coda", "foreach", "ggmcmc", "ggplot2", "gridExtra", "gtools", "label_switching", "MCMCpack", "PlackettLuce", "pmr", "prefmod", "radarchart", "rankdist", "rcdd", "Rcpp", "reshape2", "StatRank"] + "depends": ["MCMCpack", "PlackettLuce", "Rcpp", "StatRank", "abind", "coda", "foreach", "ggmcmc", "ggplot2", "gridExtra", "gtools", "label_switching", "pmr", "prefmod", "radarchart", "rankdist", "rcdd", "reshape2"] }, "PLNmodels": { "name": "PLNmodels", "version": "1.2.0", "sha256": "1fqfy3pipj8w3mma8ca33ppxpvam4hnzcklpma188s06vy75h1i9", - "depends": ["corrplot", "dplyr", "future", "future_apply", "ggplot2", "glassoFast", "gridExtra", "igraph", "magrittr", "MASS", "Matrix", "nloptr", "pscl", "purrr", "R6", "Rcpp", "RcppArmadillo", "rlang", "tidyr", "torch"] + "depends": ["MASS", "Matrix", "R6", "Rcpp", "RcppArmadillo", "corrplot", "dplyr", "future", "future_apply", "ggplot2", "glassoFast", "gridExtra", "igraph", "magrittr", "nloptr", "pscl", "purrr", "rlang", "tidyr", "torch"] }, "PLORN": { "name": "PLORN", @@ -22979,7 +23225,7 @@ "name": "PLSiMCpp", "version": "1.0.4", "sha256": "05pldxlszz4kcdqmzli31jgjd9v6sb3r89yaijc1i83c36ximarx", - "depends": ["crayon", "purrr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "crayon", "purrr"] }, "PLindleyROC": { "name": "PLindleyROC", @@ -22991,7 +23237,7 @@ "name": "PLmixed", "version": "0.1.7", "sha256": "1kn9w8xr9y1lnxa5hv95q3hipr7shs8pnhr6nr88v4rskgvvhffm", - "depends": ["lme4", "Matrix", "numDeriv", "optimx"] + "depends": ["Matrix", "lme4", "numDeriv", "optimx"] }, "PLordprob": { "name": "PLordprob", @@ -23003,7 +23249,7 @@ "name": "PLreg", "version": "0.4.1", "sha256": "1fa8h0igxqgdfapiz0z80ll2m3nqvxw4qjcrw4knrg7ladjdicwl", - "depends": ["BBmisc", "EnvStats", "Formula", "gamlss_dist", "GeneralizedHyperbolic", "nleqslv", "VGAM", "zipfR"] + "depends": ["BBmisc", "EnvStats", "Formula", "GeneralizedHyperbolic", "VGAM", "gamlss_dist", "nleqslv", "zipfR"] }, "PMA": { "name": "PMA", @@ -23027,7 +23273,7 @@ "name": "PMCMRplus", "version": "1.9.10", "sha256": "0w0zxlq80n673zlrfw46qzidwshc6rxsqka6pahbr816zabzi0yq", - "depends": ["BWStest", "gmp", "kSamples", "MASS", "multcompView", "mvtnorm", "Rmpfr", "SuppDists"] + "depends": ["BWStest", "MASS", "Rmpfr", "SuppDists", "gmp", "kSamples", "multcompView", "mvtnorm"] }, "PMEvapotranspiration": { "name": "PMEvapotranspiration", @@ -23037,33 +23283,33 @@ }, "PMwR": { "name": "PMwR", - "version": "0.19-3", - "sha256": "11pmhhyk39wc9qcgy16gavyqrrh5wkzvnk85jb9mnr9g673ljgfi", - "depends": ["datetimeutils", "fastmatch", "NMOF", "orgutils", "textutils", "zoo"] + "version": "0.19-5", + "sha256": "1yhqbp5f6a7rkxxljqw5xsl1v0yysxjlx2r99w3h2hka44mksm21", + "depends": ["NMOF", "datetimeutils", "fastmatch", "orgutils", "textutils", "zoo"] }, "PNADcIBGE": { "name": "PNADcIBGE", "version": "0.7.5", "sha256": "1pj482lanhkw389f9dwdh5h24icdcrqhnsadbbbidcaij02yraym", - "depends": ["dplyr", "httr", "magrittr", "projmgr", "RCurl", "readr", "readxl", "survey", "tibble", "timeDate"] + "depends": ["RCurl", "dplyr", "httr", "magrittr", "projmgr", "readr", "readxl", "survey", "tibble", "timeDate"] }, "PNAR": { "name": "PNAR", "version": "1.6", "sha256": "18nq5g2vsc8xy4l1km710l2v8frw3wwpn4yx23s3xczqd8hj9wfw", - "depends": ["doParallel", "foreach", "igraph", "nloptr", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "doParallel", "foreach", "igraph", "nloptr"] }, "PNDSIBGE": { "name": "PNDSIBGE", "version": "0.1.1", "sha256": "16shzhxp9vmlimp3r94ff652ca0ap7skb7iga6saynhnlk2fbm6b", - "depends": ["dplyr", "httr", "magrittr", "projmgr", "RCurl", "readr", "readxl", "survey", "tibble", "timeDate"] + "depends": ["RCurl", "dplyr", "httr", "magrittr", "projmgr", "readr", "readxl", "survey", "tibble", "timeDate"] }, "PNSIBGE": { "name": "PNSIBGE", "version": "0.2.1", "sha256": "19p8gky9ilcz8bw4hk16bprykghjvl0vhlhy37kq01lsz3hxvpaj", - "depends": ["dplyr", "httr", "magrittr", "projmgr", "RCurl", "readr", "readxl", "survey", "tibble", "timeDate"] + "depends": ["RCurl", "dplyr", "httr", "magrittr", "projmgr", "readr", "readxl", "survey", "tibble", "timeDate"] }, "PNWColors": { "name": "PNWColors", @@ -23105,13 +23351,13 @@ "name": "POMS", "version": "1.0.1", "sha256": "1ndry1csq7zsccdwd8nq9x4b9zq5j2ffykmhm38ari8n0zxxyrwy", - "depends": ["ape", "data_table", "MASS", "phangorn", "phylolm", "XNomial"] + "depends": ["MASS", "XNomial", "ape", "data_table", "phangorn", "phylolm"] }, "POMaSPU": { "name": "POMaSPU", "version": "1.0.0", "sha256": "0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya", - "depends": ["MASS", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "matrixStats"] }, "POPInf": { "name": "POPInf", @@ -23129,13 +23375,13 @@ "name": "POSTm", "version": "1.4", "sha256": "0gd6nqm66lms7yscf53qn6ny6rqhqa6c5l256867q52xlgcnjx35", - "depends": ["ape", "CompQuadForm"] + "depends": ["CompQuadForm", "ape"] }, "POSetR": { "name": "POSetR", "version": "1.1.4", "sha256": "00qz9z9mwbgvxh7775il2avrxdn116l8v31z3bksifvy81krw95a", - "depends": ["igraph", "Rcpp", "Rdpack"] + "depends": ["Rcpp", "Rdpack", "igraph"] }, "POT": { "name": "POT", @@ -23147,7 +23393,7 @@ "name": "POUMM", "version": "2.1.7", "sha256": "0pwa97sffb571nfqnbc35dj9lr8z07wjsjnwibj9dhj2dr5b2cfp", - "depends": ["adaptMCMC", "ape", "coda", "data_table", "foreach", "ggplot2", "lamW", "Rcpp"] + "depends": ["Rcpp", "adaptMCMC", "ape", "coda", "data_table", "foreach", "ggplot2", "lamW"] }, "POV": { "name": "POV", @@ -23163,8 +23409,8 @@ }, "PPCDT": { "name": "PPCDT", - "version": "0.1.0", - "sha256": "0i3j959i7rd5k1qkj1lknvsbksl15ir06avcffai4pbnpx7bl8dm", + "version": "0.2.0", + "sha256": "06984x73pb37vw8wjgpwd27j6h5j30p0idppmbbap0zz4vprgmpm", "depends": ["MASS"] }, "PPCI": { @@ -23177,7 +23423,7 @@ "name": "PPLasso", "version": "2.0", "sha256": "11xqpq7s8j1vrsf0x31pvk861wz4d3yg7a4gcwv43s3w5dxbljls", - "depends": ["cvCovEst", "genlasso", "ggplot2", "glmnet", "MASS"] + "depends": ["MASS", "cvCovEst", "genlasso", "ggplot2", "glmnet"] }, "PPMR": { "name": "PPMR", @@ -23207,7 +23453,7 @@ "name": "PPSFS", "version": "0.1.0", "sha256": "180brwqcs2qjh01a1qwdy2a8g19scn4mxzc3s6pw8gyl2r3fzxi7", - "depends": ["brglm2", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "brglm2"] }, "PPTcirc": { "name": "PPTcirc", @@ -23219,43 +23465,55 @@ "name": "PPbigdata", "version": "1.0.0", "sha256": "0v9p3mrxivq4ragi6039zgyxp9ksx3g3f6bksy9z08f8vyp1m1a8", - "depends": ["datanugget", "dplyr", "gtools", "magrittr", "MASS", "mclust", "rstiefel", "tourr", "weights"] + "depends": ["MASS", "datanugget", "dplyr", "gtools", "magrittr", "mclust", "rstiefel", "tourr", "weights"] }, "PPforest": { "name": "PPforest", "version": "0.1.3", "sha256": "1byn2l91nws91xgjjal610vv4yns12z861rq3iks4kv4giwgdfq1", - "depends": ["doParallel", "dplyr", "magrittr", "plyr", "Rcpp", "RcppArmadillo", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "dplyr", "magrittr", "plyr", "tibble", "tidyr"] }, "PPtreeViz": { "name": "PPtreeViz", "version": "2.0.4", "sha256": "008hlgi56p9wydpsb2f1dxi4slml7p417c34lw00hivbl53d6x97", - "depends": ["ggplot2", "gridExtra", "partykit", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra", "partykit"] }, "PPtreeregViz": { "name": "PPtreeregViz", "version": "2.0.5", "sha256": "0yg67fg4rjvpwp1xvznsbv635wmf6jvhp38irffccx915qvj7r51", - "depends": ["DALEX", "data_table", "dplyr", "ggplot2", "magrittr", "PPtreeViz", "Rcpp", "RcppArmadillo", "reshape2", "shapr", "tibble", "tidyr"] + "depends": ["DALEX", "PPtreeViz", "Rcpp", "RcppArmadillo", "data_table", "dplyr", "ggplot2", "magrittr", "reshape2", "shapr", "tibble", "tidyr"] }, "PQLseq": { "name": "PQLseq", "version": "1.2.1", "sha256": "0lyynzvv7n1igzfrw52021bnxprqcm2hjxmlrsxkx4898ca46g60", - "depends": ["doParallel", "foreach", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "doParallel", "foreach"] + }, + "PRA": { + "name": "PRA", + "version": "0.2.0", + "sha256": "1lpafrpzw43k29vk2y52wixdzgli9z8c3bvv2liypmlxmqmjfxly", + "depends": ["mc2d", "minpack_lm"] + }, + "PRANA": { + "name": "PRANA", + "version": "1.0.5", + "sha256": "0y7hrb1lx6mbkpayic20sr08x410cgwfvmx2a5nrssfzvxqbk5y1", + "depends": ["dplyr", "minet", "robustbase"] }, "PRDA": { "name": "PRDA", "version": "1.0.0", "sha256": "1lklwfakd54ylm5gizq36ng6498c2izapsz9yz2a95cjf860rr23", - "depends": ["MASS", "pbapply", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "pbapply"] }, "PRECAST": { "name": "PRECAST", "version": "1.6.5", "sha256": "17qk40j2by7bjc0r2wnyfca4drpzbrxp0m5r10a7494avqknjjk0", - "depends": ["colorspace", "cowplot", "dplyr", "DR_SC", "ggplot2", "ggpubr", "ggthemes", "GiRaF", "gtools", "MASS", "Matrix", "mclust", "patchwork", "pbapply", "purrr", "Rcpp", "RcppArmadillo", "scales", "scater", "Seurat"] + "depends": ["DR_SC", "GiRaF", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "Seurat", "colorspace", "cowplot", "dplyr", "ggplot2", "ggpubr", "ggthemes", "gtools", "mclust", "patchwork", "pbapply", "purrr", "scales", "scater"] }, "PREPShiny": { "name": "PREPShiny", @@ -23291,13 +23549,13 @@ "name": "PRISMA", "version": "0.2-7", "sha256": "0sk2d07m8rhipa0kdbaf8ngryda6f1ihp5akpnyw2llajf0x8as5", - "depends": ["ggplot2", "gplots", "Matrix"] + "depends": ["Matrix", "ggplot2", "gplots"] }, "PRISMA2020": { "name": "PRISMA2020", "version": "1.1.1", "sha256": "0jhf1kgcc29b8gsb42b3d5hyfzsa13lz9qgs104ynrzld94kqqwf", - "depends": ["DiagrammeR", "DiagrammeRsvg", "DT", "htmltools", "htmlwidgets", "rio", "rsvg", "scales", "shiny", "shinyjs", "stringr", "webp", "xml2", "zip"] + "depends": ["DT", "DiagrammeR", "DiagrammeRsvg", "htmltools", "htmlwidgets", "rio", "rsvg", "scales", "shiny", "shinyjs", "stringr", "webp", "xml2", "zip"] }, "PRISMAstatement": { "name": "PRISMAstatement", @@ -23307,15 +23565,15 @@ }, "PRNG": { "name": "PRNG", - "version": "0.0.2", - "sha256": "1x1nv5pfz521jkwsnafc55d4mlkp5yfy3ywya7y8p1qjsj0bisfx", + "version": "0.0.2.1", + "sha256": "0lsr0jf08mwi4ip3hcmk8y2jxk89366skqcx85yr8j2wzqwyds15", "depends": [] }, "PROBShiny": { "name": "PROBShiny", "version": "0.1.0", "sha256": "17p6pb8nwq36ha697f2lf8nwzj5cylmh8rdzyag49ks5hi9painb", - "depends": ["epitools", "LaplacesDemon", "rmarkdown", "rpivotTable", "shiny", "shinyMatrix"] + "depends": ["LaplacesDemon", "epitools", "rmarkdown", "rpivotTable", "shiny", "shinyMatrix"] }, "PROJ": { "name": "PROJ", @@ -23339,7 +23597,7 @@ "name": "PROreg", "version": "1.3", "sha256": "0x3gaadd9nd5mcs6l2jv0874afps13qgq81bqwcg1hhgjzy2k4mm", - "depends": ["car", "fmsb", "Matrix", "matrixcalc", "numDeriv", "RColorBrewer", "rootSolve"] + "depends": ["Matrix", "RColorBrewer", "car", "fmsb", "matrixcalc", "numDeriv", "rootSolve"] }, "PROscorer": { "name": "PROscorer", @@ -23357,7 +23615,7 @@ "name": "PROsetta", "version": "0.4.1", "sha256": "1b013cwng8k17yfm4zrwjg7vc4papr2wmqq3a5kawl7bfy4ibaqw", - "depends": ["equate", "lavaan", "mirt", "mvnfast", "plink", "psych", "Rcpp", "RcppArmadillo", "TestDesign"] + "depends": ["Rcpp", "RcppArmadillo", "TestDesign", "equate", "lavaan", "mirt", "mvnfast", "plink", "psych"] }, "PRP": { "name": "PRP", @@ -23375,7 +23633,7 @@ "name": "PRSPGx", "version": "0.3.0", "sha256": "1vvclrp6h63l471qvgwkdhs52lrkapz0v90gwld89zwim6pnh7av", - "depends": ["bdsmatrix", "bigparallelr", "bigsnpr", "bigsparser", "bigstatsr", "gglasso", "GIGrvg", "glmnet", "lmtest", "Matrix", "matrixcalc", "MCMCpack", "mvtnorm", "propagate", "Rfast", "SGL"] + "depends": ["GIGrvg", "MCMCpack", "Matrix", "Rfast", "SGL", "bdsmatrix", "bigparallelr", "bigsnpr", "bigsparser", "bigstatsr", "gglasso", "glmnet", "lmtest", "matrixcalc", "mvtnorm", "propagate"] }, "PRSim": { "name": "PRSim", @@ -23393,13 +23651,13 @@ "name": "PReMiuM", "version": "3.2.13", "sha256": "1qamq7glc0dag1ps0dr4f931ij9jk91lj5h1k2g0yd0h3kqamawn", - "depends": ["BH", "cluster", "data_table", "gamlss_dist", "ggplot2", "plotrix", "Rcpp", "RcppEigen", "sf", "spdep"] + "depends": ["BH", "Rcpp", "RcppEigen", "cluster", "data_table", "gamlss_dist", "ggplot2", "plotrix", "sf", "spdep"] }, "PResiduals": { "name": "PResiduals", "version": "1.0-1", "sha256": "0mq16cs07hw5c9jj08vpgbb15xvjvz9h0npsbqphiibsb6ca5fwb", - "depends": ["Formula", "MASS", "rms", "SparseM"] + "depends": ["Formula", "MASS", "SparseM", "rms"] }, "PSAWR": { "name": "PSAWR", @@ -23411,7 +23669,7 @@ "name": "PSAboot", "version": "1.3.8", "sha256": "1y0d5gglmzcnd0yvq33k1canjzhl62df9abgw1w08azm94arfh1q", - "depends": ["ggplot2", "ggthemes", "Matching", "MatchIt", "modeltools", "party", "PSAgraphics", "psych", "reshape2", "rpart", "TriMatch"] + "depends": ["MatchIt", "Matching", "PSAgraphics", "TriMatch", "ggplot2", "ggthemes", "modeltools", "party", "psych", "reshape2", "rpart"] }, "PSAgraphics": { "name": "PSAgraphics", @@ -23423,7 +23681,7 @@ "name": "PSCBS", "version": "0.67.0", "sha256": "1gnd2nkh587dqpnbk5fsai7hx261vm405550rhlxffvs366x3596", - "depends": ["aroma_light", "DNAcopy", "future", "listenv", "matrixStats", "R_cache", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["DNAcopy", "R_cache", "R_methodsS3", "R_oo", "R_utils", "aroma_light", "future", "listenv", "matrixStats"] }, "PSDistr": { "name": "PSDistr", @@ -23471,7 +23729,7 @@ "name": "PSS.Health", "version": "1.0.2", "sha256": "0vkg727rhh267vvcf8zkf5k6wm0k54vqysrsm4zc3sin3w1chnaf", - "depends": ["dplyr", "DT", "easypower", "EnvStats", "epiR", "ggplot2", "ICC_Sample_Size", "kappaSize", "longpower", "plotly", "powerMediation", "powerSurvEpi", "presize", "pROC", "pwr", "pwr2", "shiny", "shinycssloaders", "shinyFeedback", "shinyhelper", "writexl"] + "depends": ["DT", "EnvStats", "ICC_Sample_Size", "dplyr", "easypower", "epiR", "ggplot2", "kappaSize", "longpower", "pROC", "plotly", "powerMediation", "powerSurvEpi", "presize", "pwr", "pwr2", "shiny", "shinyFeedback", "shinycssloaders", "shinyhelper", "writexl"] }, "PSSIM": { "name": "PSSIM", @@ -23495,13 +23753,13 @@ "name": "PSW", "version": "1.1-3", "sha256": "0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x", - "depends": ["gtools", "Hmisc"] + "depends": ["Hmisc", "gtools"] }, "PScr": { "name": "PScr", "version": "1.1", "sha256": "0cbmb1z4iwxw82m3f3y5iyr2hd1mgqsrvn7ip4rmsqy3zakyh06s", - "depends": ["pracma", "survival", "VGAM"] + "depends": ["VGAM", "pracma", "survival"] }, "PSinference": { "name": "PSinference", @@ -23519,7 +23777,7 @@ "name": "PSweight", "version": "1.2.0", "sha256": "1p0iq95jwhh6j3gw3zd8m58rryy8j33k2lrzypb5qzhwrgx2i41v", - "depends": ["gbm", "ggplot2", "lme4", "MASS", "nnet", "numDeriv", "SuperLearner"] + "depends": ["MASS", "SuperLearner", "gbm", "ggplot2", "lme4", "nnet", "numDeriv"] }, "PTAk": { "name": "PTAk", @@ -23543,13 +23801,13 @@ "name": "PTSR", "version": "0.1.2", "sha256": "0zwqw8zdp0p05nm64yg658iqfbj26n3v2py8r5m6g1sjispm5whf", - "depends": ["actuar", "extraDistr", "numDeriv", "SuppDists"] + "depends": ["SuppDists", "actuar", "extraDistr", "numDeriv"] }, "PTXQC": { "name": "PTXQC", "version": "1.1.1", "sha256": "0855xir9b604lhhymxf3rhin2sikxvg25zbgd5gvwgc5n3114d3m", - "depends": ["data_table", "ggdendro", "ggplot2", "gridExtra", "gtable", "htmlTable", "knitr", "magrittr", "plyr", "R6", "R6P", "RColorBrewer", "reshape2", "rmarkdown", "rmzqc", "seqinr", "UpSetR", "xml2", "yaml"] + "depends": ["R6", "R6P", "RColorBrewer", "UpSetR", "data_table", "ggdendro", "ggplot2", "gridExtra", "gtable", "htmlTable", "knitr", "magrittr", "plyr", "reshape2", "rmarkdown", "rmzqc", "seqinr", "xml2", "yaml"] }, "PTwins": { "name": "PTwins", @@ -23561,7 +23819,7 @@ "name": "PUGMM", "version": "0.1.0", "sha256": "03bwg4mb0kc708plqzym0xw5giai45nk601fs53gfnad57y70wdp", - "depends": ["ClusterR", "doParallel", "foreach", "igraph", "MASS", "Matrix", "mclust", "mcompanion", "ppclust"] + "depends": ["ClusterR", "MASS", "Matrix", "doParallel", "foreach", "igraph", "mclust", "mcompanion", "ppclust"] }, "PUMP": { "name": "PUMP", @@ -23573,13 +23831,13 @@ "name": "PUPAIM", "version": "0.3.1", "sha256": "1sypmlpjsdn2rm6pci64xv6ibixz43zhjaw0k8q9jp3cajbb11qh", - "depends": ["ggplot2", "Metrics", "nls2"] + "depends": ["Metrics", "ggplot2", "nls2"] }, "PUPAK": { "name": "PUPAK", "version": "0.1.1", "sha256": "1274z53qclddww90qgnl9vwdnxv2p66lclmq9fixchnpgm9xc6qw", - "depends": ["ggplot2", "Metrics", "nls2", "segmented"] + "depends": ["Metrics", "ggplot2", "nls2", "segmented"] }, "PUPMCR": { "name": "PUPMCR", @@ -23591,13 +23849,13 @@ "name": "PUPMSI", "version": "0.1.0", "sha256": "04w2c783bbkfdqkxvwvrf3fk09hzswbkq7najcn456cz22241w9l", - "depends": ["ggplot2", "Metrics", "minpack_lm", "nls2"] + "depends": ["Metrics", "ggplot2", "minpack_lm", "nls2"] }, "PUlasso": { "name": "PUlasso", "version": "3.2.5", "sha256": "1lyf7x4sixpl74alns3kmr2iz10qmjz444gyqxgj5k4xqswgaz15", - "depends": ["doParallel", "foreach", "ggplot2", "Matrix", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "doParallel", "foreach", "ggplot2"] }, "PVAClone": { "name": "PVAClone", @@ -23609,7 +23867,7 @@ "name": "PVR", "version": "0.3", "sha256": "0pcnazkiwmicr3k6k70r8skqk0pd46fcqhhxghawxjs4slgnygkj", - "depends": ["ape", "MASS", "splancs"] + "depends": ["MASS", "ape", "splancs"] }, "PVplr": { "name": "PVplr", @@ -23627,7 +23885,7 @@ "name": "PWEV", "version": "0.1.0", "sha256": "1jl63wp6nl2zyznc63zcb97yi1fvzj4mic4ri0ni515s0nb5jd5b", - "depends": ["Metrics", "rugarch", "rumidas", "WeightedEnsemble", "xts", "zoo"] + "depends": ["Metrics", "WeightedEnsemble", "rugarch", "rumidas", "xts", "zoo"] }, "PWEXP": { "name": "PWEXP", @@ -23651,25 +23909,25 @@ "name": "PaRe", "version": "0.1.13", "sha256": "1p65p3anwyk1zg82lir7wqvl9zxi7p4hjb70kvfhj06p1n8f653c", - "depends": ["checkmate", "cli", "cyclocomp", "desc", "DiagrammeR", "DiagrammeRsvg", "dplyr", "git2r", "glue", "igraph", "lintr", "magrittr", "pak", "R6", "rmarkdown", "rsvg", "stringr"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "R6", "checkmate", "cli", "cyclocomp", "desc", "dplyr", "git2r", "glue", "igraph", "lintr", "magrittr", "pak", "rmarkdown", "rsvg", "stringr"] }, "Pade": { "name": "Pade", - "version": "1.0.6", - "sha256": "0bjkr3yh1kxymyrfzi9amjznxgqc2xx69zhs2immn4sk1w3xzvzp", + "version": "1.0.7", + "sha256": "1rs3wap5rx4kq1vabhcfj2qbzfq2b78nvs4bc5h0jg3z32g99220", "depends": [] }, "PairViz": { "name": "PairViz", "version": "1.3.6", "sha256": "12rg1ml401c9zz1q6qy2ghs18x9vdb8smrkb2bcp34afbg5dvdd3", - "depends": ["graph", "gtools", "TSP"] + "depends": ["TSP", "graph", "gtools"] }, "PairedData": { "name": "PairedData", "version": "1.1.1", "sha256": "07y5fd4fkwfp0lbacf41ya8cn7x4n1haxl0cln9iibjffc1mbr5q", - "depends": ["ggplot2", "gld", "lattice", "MASS", "mvtnorm"] + "depends": ["MASS", "ggplot2", "gld", "lattice", "mvtnorm"] }, "PakPC2017": { "name": "PakPC2017", @@ -23777,7 +24035,7 @@ "name": "PanelMatch", "version": "2.2.0", "sha256": "14y6msvs4h3xdpi83yi6q4a58xqbf1nxs5m0wbbzszzj7jdjiq79", - "depends": ["CBPS", "data_table", "doParallel", "foreach", "ggplot2", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["CBPS", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "data_table", "doParallel", "foreach", "ggplot2"] }, "PanelTM": { "name": "PanelTM", @@ -23795,7 +24053,7 @@ "name": "ParBayesianOptimization", "version": "1.2.6", "sha256": "0g5i4908fl2j1a4jfsg1xs4q92mc29zp8dyf52a370ki2512w6h1", - "depends": ["crayon", "data_table", "dbscan", "DiceKriging", "foreach", "ggplot2", "ggpubr", "lhs"] + "depends": ["DiceKriging", "crayon", "data_table", "dbscan", "foreach", "ggplot2", "ggpubr", "lhs"] }, "ParDNAcopy": { "name": "ParDNAcopy", @@ -23819,7 +24077,7 @@ "name": "ParamHelpers", "version": "1.14.1", "sha256": "088sl3az4ysq8cyw82brdn9xm5yy7rqskxih462d1m5hi62gyl04", - "depends": ["backports", "BBmisc", "checkmate", "fastmatch"] + "depends": ["BBmisc", "backports", "checkmate", "fastmatch"] }, "Pareto": { "name": "Pareto", @@ -23835,9 +24093,9 @@ }, "Paris2024Colours": { "name": "Paris2024Colours", - "version": "0.1.2", - "sha256": "12xycmqc9hr12db7w9499l89gmww5j0vs6nhyzsirkbg8vvq8qql", - "depends": [] + "version": "0.2.0", + "sha256": "10qf6rrk4lsw6qx5lsr8331fnvdli7cc24phg7asal2w2mg0h07v", + "depends": ["ggplot2"] }, "PartCensReg": { "name": "PartCensReg", @@ -23849,7 +24107,7 @@ "name": "PartialNetwork", "version": "1.0.4", "sha256": "010q3d0r40kszdsyc6bish7vrzl98zxi47ppbnv5n86p0n3dckjn", - "depends": ["abind", "doParallel", "doRNG", "foreach", "Formula", "formula_tools", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical", "RcppProgress"] + "depends": ["Formula", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppNumerical", "RcppProgress", "abind", "doParallel", "doRNG", "foreach", "formula_tools"] }, "Partiallyoverlapping": { "name": "Partiallyoverlapping", @@ -23859,15 +24117,15 @@ }, "PatientProfiles": { "name": "PatientProfiles", - "version": "1.1.0", - "sha256": "0f2qnf150h47ld5n2718r6iyxkb5hi2r6z3m7krdbr1i4fd2h5w2", + "version": "1.1.1", + "sha256": "0h9d4qm83qkfdvdmz0vm29yhn50vrbf9qxp2mbgmxx067yynncz6", "depends": ["CDMConnector", "checkmate", "cli", "dplyr", "lifecycle", "magrittr", "omopgenerics", "purrr", "rlang", "stringr", "tidyr", "visOmopResults"] }, "Patterns": { "name": "Patterns", "version": "1.5", "sha256": "1b4krl9gcwrxrslqyc0hhc6kqc7q34i70pyx9yb7xkdixs6dkr95", - "depends": ["abind", "cluster", "e1071", "gplots", "igraph", "jetset", "lars", "lattice", "limma", "Mfuzz", "movMF", "nnls", "plotrix", "repmis", "SelectBoost", "tnet", "VGAM", "WGCNA"] + "depends": ["Mfuzz", "SelectBoost", "VGAM", "WGCNA", "abind", "cluster", "e1071", "gplots", "igraph", "jetset", "lars", "lattice", "limma", "movMF", "nnls", "plotrix", "repmis", "tnet"] }, "PdPDB": { "name": "PdPDB", @@ -23901,8 +24159,8 @@ }, "PeakSegJoint": { "name": "PeakSegJoint", - "version": "2024.1.24", - "sha256": "0jq6ch623vgxmg8z6jwgprk6szqp8qbjzy743yl7qgj906pdg79v", + "version": "2024.6.27", + "sha256": "0rlm9adjrnbh58j7vb6lvqam13crgcrdcfs7rl7cbarfj3k9d8nr", "depends": ["PeakError", "penaltyLearning"] }, "PeakSegOptimal": { @@ -23931,9 +24189,9 @@ }, "PenCoxFrail": { "name": "PenCoxFrail", - "version": "1.0.1", - "sha256": "0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7", - "depends": ["Matrix", "Rcpp", "RcppArmadillo", "survival"] + "version": "2.0.0", + "sha256": "1g5qggazvfj38436kj144q46aa59s4idnqnr5yv9c3svjikmw1r7", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "coxme", "survival"] }, "PenIC": { "name": "PenIC", @@ -23957,7 +24215,7 @@ "name": "PerFit", "version": "1.4.6", "sha256": "13917nvxii8pg69h1wcpmlv45sdrdldd3zxdrypr4mn456ff74k4", - "depends": ["fda", "Hmisc", "irtoys", "ltm", "MASS", "Matrix", "mirt"] + "depends": ["Hmisc", "MASS", "Matrix", "fda", "irtoys", "ltm", "mirt"] }, "PerMat": { "name": "PerMat", @@ -23975,7 +24233,7 @@ "name": "PerfMeas", "version": "1.2.5", "sha256": "13yjk0kwpbsqwl056hzf0zj2br1mk4faqcn1whdfxmq348c14hjb", - "depends": ["graph", "limma", "RBGL"] + "depends": ["RBGL", "graph", "limma"] }, "PerformanceAnalytics": { "name": "PerformanceAnalytics", @@ -24005,7 +24263,7 @@ "name": "PerseusR", "version": "0.3.4", "sha256": "1k03flbnjndx5mm26hysk64z89858m50kjs8gyldm4s5f09iny6p", - "depends": ["Biobase", "plyr", "stringr", "XML"] + "depends": ["Biobase", "XML", "plyr", "stringr"] }, "PersianStemmer": { "name": "PersianStemmer", @@ -24029,7 +24287,7 @@ "name": "Petersen", "version": "2024.6.1", "sha256": "03xhsmlgqgp037ccy2q2a65cspcy1qxm1vzb6yljhv61r60zfqjz", - "depends": ["AICcmodavg", "bbmle", "BTSPAS", "formula_tools", "ggplot2", "MASS", "Matrix", "msm", "numDeriv", "plyr", "reshape2", "rlang", "SPAS", "stringr", "tidyr"] + "depends": ["AICcmodavg", "BTSPAS", "MASS", "Matrix", "SPAS", "bbmle", "formula_tools", "ggplot2", "msm", "numDeriv", "plyr", "reshape2", "rlang", "stringr", "tidyr"] }, "PetfindeR": { "name": "PetfindeR", @@ -24041,7 +24299,7 @@ "name": "PhageCocktail", "version": "1.0.3", "sha256": "0lr1gnwpaqrf8ny5ssx2cjv8hi6q2ilmr7qif3jl9agh4w0nkp89", - "depends": ["bipartite", "factoextra", "readxl", "RJSONIO", "smerc", "stringr"] + "depends": ["RJSONIO", "bipartite", "factoextra", "readxl", "smerc", "stringr"] }, "Phase123": { "name": "Phase123", @@ -24053,7 +24311,7 @@ "name": "Phase12Compare", "version": "1.5", "sha256": "0n9rjgdllpnj451a8d4p8x3mjf23czcmk7cn1c9v3l7mg4jn18h2", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm"] }, "PhaseType": { "name": "PhaseType", @@ -24071,7 +24329,7 @@ "name": "PheCAP", "version": "1.2.1", "sha256": "00dfy0iby21kqfxz2npz4dn1klxcdlll8xrk2hsmc56fjfidbdhz", - "depends": ["glmnet", "RMySQL"] + "depends": ["RMySQL", "glmnet"] }, "PheNorm": { "name": "PheNorm", @@ -24083,7 +24341,7 @@ "name": "PheVis", "version": "1.0.4", "sha256": "1anj079vdpfbkilbvk0b2b78qk87gc7lmivzl8syq6lb3dxkja2l", - "depends": ["dplyr", "ggplot2", "glmnet", "knitr", "lme4", "purrr", "randomForest", "Rcpp", "tidyr", "viridis", "zoo"] + "depends": ["Rcpp", "dplyr", "ggplot2", "glmnet", "knitr", "lme4", "purrr", "randomForest", "tidyr", "viridis", "zoo"] }, "Phenotype": { "name": "Phenotype", @@ -24095,7 +24353,7 @@ "name": "PhenotypeSimulator", "version": "0.3.4", "sha256": "19c79kls6i1qpsk41lp8whva5in47m2wlr0v3ggw5bblp4fkd43m", - "depends": ["cowplot", "data_table", "dplyr", "ggplot2", "Hmisc", "mvtnorm", "optparse", "R_utils", "Rcpp", "reshape2", "snpStats", "zoo"] + "depends": ["Hmisc", "R_utils", "Rcpp", "cowplot", "data_table", "dplyr", "ggplot2", "mvtnorm", "optparse", "reshape2", "snpStats", "zoo"] }, "Phi2rho": { "name": "Phi2rho", @@ -24131,7 +24389,7 @@ "name": "PhylogeneticEM", "version": "1.7.0", "sha256": "1yxg13jm6jhciip76wh9936d10hxhjqdvlj15f249jzn7vfs6pyx", - "depends": ["ape", "capushe", "foreach", "gglasso", "glmnet", "LINselect", "MASS", "Matrix", "plyr", "Rcpp", "RcppArmadillo", "robustbase"] + "depends": ["LINselect", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "ape", "capushe", "foreach", "gglasso", "glmnet", "plyr", "robustbase"] }, "PhysActBedRest": { "name": "PhysActBedRest", @@ -24153,9 +24411,9 @@ }, "PieGlyph": { "name": "PieGlyph", - "version": "0.1.0", - "sha256": "1wg8b0zsgcsgrmx5yz0sj6bifk76zr085lac3xlkrxqnxwxvlk0n", - "depends": ["cli", "dplyr", "forcats", "ggforce", "ggplot2", "plyr", "rlang", "scales", "tidyr"] + "version": "1.0.0", + "sha256": "1fjcxap6af2h9j2v26r3f4f1gyhgkar06p2y8p7j862i1fpgrrcd", + "depends": ["cli", "dplyr", "forcats", "ggforce", "ggiraph", "ggplot2", "plyr", "purrr", "rlang", "scales", "tidyr"] }, "PieceExpIntensity": { "name": "PieceExpIntensity", @@ -24173,13 +24431,13 @@ "name": "PlackettLuce", "version": "0.4.3", "sha256": "04pid91wsf3m3mg45zis17xa251491011ihbmfsdy7m914l9wcyd", - "depends": ["CVXR", "igraph", "Matrix", "matrixStats", "partykit", "psychotools", "psychotree", "qvcalc", "R6", "RSpectra", "sandwich"] + "depends": ["CVXR", "Matrix", "R6", "RSpectra", "igraph", "matrixStats", "partykit", "psychotools", "psychotree", "qvcalc", "sandwich"] }, "PlaneGeometry": { "name": "PlaneGeometry", "version": "1.6.0", "sha256": "0v4484kh8aqni0n6nfd9c1wiw62fj439647xb583pbmxi5ja58hq", - "depends": ["Carlson", "CVXR", "fitConic", "R6", "rcdd", "sdpt3r", "stringr", "uniformly"] + "depends": ["CVXR", "Carlson", "R6", "fitConic", "rcdd", "sdpt3r", "stringr", "uniformly"] }, "Planesmuestra": { "name": "Planesmuestra", @@ -24197,19 +24455,19 @@ "name": "PlasmaMutationDetector", "version": "1.7.2", "sha256": "0qra7q2pzw212qylyrfhv6zjcsldfw84b93cari0qjqnw4gyfph2", - "depends": ["GenomicRanges", "ggplot2", "robustbase", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["GenomicRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "ggplot2", "robustbase", "rtracklayer"] }, "PlasmaMutationDetector2": { "name": "PlasmaMutationDetector2", "version": "1.1.11", "sha256": "1dcmw6i488gxqqn52r0n9aclnz41ba2gc99vf6ac1wx5flcfm3l9", - "depends": ["GenomicRanges", "ggplot2", "robustbase", "Rsamtools", "rtracklayer", "S4Vectors", "SummarizedExperiment", "VariantAnnotation"] + "depends": ["GenomicRanges", "Rsamtools", "S4Vectors", "SummarizedExperiment", "VariantAnnotation", "ggplot2", "robustbase", "rtracklayer"] }, "Plasmidprofiler": { "name": "Plasmidprofiler", "version": "0.1.6", "sha256": "10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k", - "depends": ["ape", "dplyr", "gdata", "ggdendro", "ggplot2", "gridExtra", "gtable", "htmlwidgets", "magrittr", "plotly", "plyr", "RColorBrewer", "reshape2", "stringr"] + "depends": ["RColorBrewer", "ape", "dplyr", "gdata", "ggdendro", "ggplot2", "gridExtra", "gtable", "htmlwidgets", "magrittr", "plotly", "plyr", "reshape2", "stringr"] }, "PlatformDesign": { "name": "PlatformDesign", @@ -24263,12 +24521,12 @@ "name": "PoDBAY", "version": "1.4.3", "sha256": "1c1dmggcc8k4h56063r97gjavd44llc51j54qs1wck9zir414i8w", - "depends": ["dplyr", "ggplot2", "Rcpp"] + "depends": ["Rcpp", "dplyr", "ggplot2"] }, "PoPdesign": { "name": "PoPdesign", - "version": "1.0.4", - "sha256": "03nskqhc4xc40lww0q2gfd76rs8d5ypc571s9qhaibq7zslmy2h2", + "version": "1.1.0", + "sha256": "14vgxjzq9wlg3fgh1vy84v04ij51bgy97pl9yi61ysa84pgac6cb", "depends": ["Iso", "knitr", "magick"] }, "PoSI": { @@ -24281,7 +24539,7 @@ "name": "PogromcyDanych", "version": "1.7.1", "sha256": "0601n76nybvahd5xsghwbydc7gfcvj1qbpqhw06d4mzy97am7yl0", - "depends": ["dplyr", "SmarterPoland"] + "depends": ["SmarterPoland", "dplyr"] }, "PoiClaClu": { "name": "PoiClaClu", @@ -24293,49 +24551,49 @@ "name": "PointFore", "version": "0.2.0", "sha256": "0ml6xcdl4ygr01q0cjwd11ql7wal91jnf3hs1rfhfr4mh8jpgivx", - "depends": ["boot", "car", "ggplot2", "gmm", "lubridate", "MASS", "sandwich"] + "depends": ["MASS", "boot", "car", "ggplot2", "gmm", "lubridate", "sandwich"] }, "PointedSDMs": { "name": "PointedSDMs", - "version": "1.3.2", - "sha256": "1279zjjzxfyqaqwz9qji58rr4gjniplfb9hyg7kfqx062nlac49a", - "depends": ["blockCV", "ggplot2", "inlabru", "R_devices", "R6", "raster", "sf", "sp", "terra"] + "version": "2.1.0", + "sha256": "17z51hcpr2a3z49yjp4nn532assi6nws0adcs204jnr2i0zwb8a5", + "depends": ["R6", "R_devices", "blockCV", "ggplot2", "inlabru", "raster", "sf", "sp", "terra"] }, "PoisBinNonNor": { "name": "PoisBinNonNor", "version": "1.3.3", "sha256": "0m8ajizij9kvp057rqmd10zadmvr4a1ka664jc9rdjh2xqgd5s2i", - "depends": ["BB", "corpcor", "Matrix", "mvtnorm"] + "depends": ["BB", "Matrix", "corpcor", "mvtnorm"] }, "PoisBinOrd": { "name": "PoisBinOrd", "version": "1.4.3", "sha256": "0s6v0minnwqx025nfn3kkkhbh8pzx6wgxars92kh6x9gdzf9i6ka", - "depends": ["corpcor", "GenOrd", "Matrix", "mvtnorm"] + "depends": ["GenOrd", "Matrix", "corpcor", "mvtnorm"] }, "PoisBinOrdNonNor": { "name": "PoisBinOrdNonNor", "version": "1.5.3", "sha256": "16c0z3974lvvr7xvrv8frzn9m5sg2jicjan52xgg7dxlm3rsij1s", - "depends": ["BB", "corpcor", "GenOrd", "MASS", "Matrix"] + "depends": ["BB", "GenOrd", "MASS", "Matrix", "corpcor"] }, "PoisBinOrdNor": { "name": "PoisBinOrdNor", "version": "1.6.3", "sha256": "02v9p82z85vkbhap2xn1rz8ibvvavsq8mgxxzicl749j4j9hcrmf", - "depends": ["corpcor", "GenOrd", "Matrix", "mvtnorm", "psych"] + "depends": ["GenOrd", "Matrix", "corpcor", "mvtnorm", "psych"] }, "PoisNonNor": { "name": "PoisNonNor", "version": "1.6.3", "sha256": "1572ma1vk17gp2j9fvmbiaxmnmb773mw15z6mlcf1slgpayp1ldb", - "depends": ["BB", "corpcor", "MASS", "Matrix"] + "depends": ["BB", "MASS", "Matrix", "corpcor"] }, "PoisNor": { "name": "PoisNor", "version": "1.3.3", "sha256": "1qi54fg2b1qc305kaihfwr2dkh3b3dd6l67yp9gi61n29kfxaqmf", - "depends": ["corpcor", "Matrix", "mvtnorm"] + "depends": ["Matrix", "corpcor", "mvtnorm"] }, "PoissonBinomial": { "name": "PoissonBinomial", @@ -24347,7 +24605,7 @@ "name": "PoissonMultinomial", "version": "1.1", "sha256": "0xbbs37i23f2swd15rxrw780q7cck9qz5yc4218knxgbj9p5pn8h", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm"] }, "PoissonPCA": { "name": "PoissonPCA", @@ -24431,7 +24689,7 @@ "name": "PoolTestR", "version": "0.1.3", "sha256": "0n9fihb2yc6jnxs1v0yq872pg7b1jd7lx7bwa9d1r8yv36haxzvr", - "depends": ["BH", "brms", "dplyr", "lme4", "progress", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "stringr"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "brms", "dplyr", "lme4", "progress", "rstan", "rstantools", "stringr"] }, "PooledCohort": { "name": "PooledCohort", @@ -24449,19 +24707,19 @@ "name": "PopED", "version": "0.6.0", "sha256": "0s8lr17s6w8isjig4z8jzgpnpsb1kg98d32y7kslbwzl08cbnza0", - "depends": ["boot", "codetools", "dplyr", "ggplot2", "gtools", "magrittr", "MASS", "mvtnorm", "purrr", "stringr", "tibble"] + "depends": ["MASS", "boot", "codetools", "dplyr", "ggplot2", "gtools", "magrittr", "mvtnorm", "purrr", "stringr", "tibble"] }, "PopGenHelpR": { "name": "PopGenHelpR", - "version": "1.3.0", - "sha256": "0s7grqzh3dy6rn7ricq79sr936q3prnj9zq2c5474pyl0pypv85p", - "depends": ["adegenet", "dartR", "dplyr", "ggplot2", "gstat", "hierfstat", "magrittr", "poppr", "raster", "reshape2", "rlang", "scatterpie", "sp", "spData", "spdep", "StAMPP", "vcfR"] + "version": "1.3.2", + "sha256": "0qkfrv5qshzb06q0y6vp9f01xcs9zqc7zb8nmpyl1sb18a6bvv2r", + "depends": ["dplyr", "ggplot2", "magrittr", "reshape2", "rlang", "scatterpie", "spData", "spdep", "vcfR"] }, "PopGenReport": { "name": "PopGenReport", "version": "3.1", "sha256": "19df1178kznrrzfkhaaf0lkmfk6kasl0x39k3zv3b5w6k7697igs", - "depends": ["ade4", "adegenet", "calibrate", "dismo", "gap", "gdistance", "genetics", "GGally", "ggplot2", "knitr", "lattice", "mmod", "pegas", "plyr", "R_utils", "raster", "reshape2", "RgoogleMaps", "sp", "vegan", "xtable"] + "depends": ["GGally", "R_utils", "RgoogleMaps", "ade4", "adegenet", "calibrate", "dismo", "gap", "gdistance", "genetics", "ggplot2", "knitr", "lattice", "mmod", "pegas", "plyr", "raster", "reshape2", "sp", "vegan", "xtable"] }, "PopVar": { "name": "PopVar", @@ -24479,7 +24737,7 @@ "name": "PortRisk", "version": "1.1.0", "sha256": "05yxqcv0cijy3s9zx68f9xy59jv55kmj3v0pz5pgl17j23kb9rlc", - "depends": ["copula", "MASS", "MCMCpack", "tseries", "zoo"] + "depends": ["MASS", "MCMCpack", "copula", "tseries", "zoo"] }, "PortalHacienda": { "name": "PortalHacienda", @@ -24489,9 +24747,9 @@ }, "PortfolioAnalytics": { "name": "PortfolioAnalytics", - "version": "1.1.0", - "sha256": "1jy89brrdw8ilbi9pjxxq5yhqw85ik4kzdd2sa60crjlhvipx0ff", - "depends": ["foreach", "PerformanceAnalytics", "xts", "zoo"] + "version": "2.0.0", + "sha256": "0rncchlc3n5kyfw7hfbxivi45gr64i89ylzr20mh9lqrqi0rif6a", + "depends": ["GenSA", "PerformanceAnalytics", "ROI_plugin_symphony", "foreach", "mco", "pso", "xts", "zoo"] }, "PortfolioOptim": { "name": "PortfolioOptim", @@ -24515,7 +24773,7 @@ "name": "PosteriorBootstrap", "version": "0.1.2", "sha256": "078b287brz4nlbdzbbvf5avy4qjv5hnz2wy61bwkk8l2kbg1j6as", - "depends": ["e1071", "MASS"] + "depends": ["MASS", "e1071"] }, "PottsUtils": { "name": "PottsUtils", @@ -24527,7 +24785,7 @@ "name": "Power2Stage", "version": "0.5-4", "sha256": "1g4zrprbd5q1dn4jfq5c9ayss4p0ljhbsfr3h8h9sjbmcg62rsal", - "depends": ["cubature", "mvtnorm", "PowerTOST"] + "depends": ["PowerTOST", "cubature", "mvtnorm"] }, "PowerNormal": { "name": "PowerNormal", @@ -24561,21 +24819,21 @@ }, "PracTools": { "name": "PracTools", - "version": "1.4.3", - "sha256": "14bgwmly49ba0xrvlns9dfn3q5yz38q3kvc3g6swryzhfb5wjb4r", + "version": "1.5", + "sha256": "1ridvpj9zgf987ysg86620r7daxh6r48gfjnyd6amsb8i6rdvp31", "depends": ["dplyr", "geosphere", "ggplot2", "usmap"] }, "PracticalEquiDesign": { "name": "PracticalEquiDesign", "version": "0.0.3", "sha256": "0jms5j9vg5g1llwkzjglj6k26wgj16jxdigllra4gjzk0azbgn9q", - "depends": ["dplyr", "ggplot2", "numDeriv", "Temporal", "tidyr"] + "depends": ["Temporal", "dplyr", "ggplot2", "numDeriv", "tidyr"] }, "PreKnitPostHTMLRender": { "name": "PreKnitPostHTMLRender", "version": "0.1.0", "sha256": "1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1", - "depends": ["knitr", "rmarkdown", "XML"] + "depends": ["XML", "knitr", "rmarkdown"] }, "PreProcess": { "name": "PreProcess", @@ -24587,7 +24845,7 @@ "name": "PreProcessRecordLinkage", "version": "1.0.1", "sha256": "05j3nbilkw8iqhdazkjz58sgnnwan2nh28b2sqi0gphzdbwks7mi", - "depends": ["data_table", "RecordLinkage", "stringr", "syn", "tm"] + "depends": ["RecordLinkage", "data_table", "stringr", "syn", "tm"] }, "PreProcessing": { "name": "PreProcessing", @@ -24605,25 +24863,25 @@ "name": "PredCRG", "version": "1.0.2", "sha256": "0z84p8l2q66rapb9lhx8m8iadz3q989q5qkvcp8ylv80cz6qkibx", - "depends": ["Biostrings", "e1071", "kernlab", "Peptides", "protr"] + "depends": ["Biostrings", "Peptides", "e1071", "kernlab", "protr"] }, "PredPsych": { "name": "PredPsych", "version": "0.4", "sha256": "00h4p1szqzh4a2kjvlriyinh330cfwxsrvs6fi089mr207q890vj", - "depends": ["caret", "e1071", "ggplot2", "MASS", "mclust", "party", "plyr", "randomForest", "rpart", "statmod"] + "depends": ["MASS", "caret", "e1071", "ggplot2", "mclust", "party", "plyr", "randomForest", "rpart", "statmod"] }, "PredictABEL": { "name": "PredictABEL", "version": "1.2-4", "sha256": "144xmfsp62ssmg501f4y173jrqyv8vps36j4yrwg6ghcmyc01wf8", - "depends": ["Hmisc", "lazyeval", "PBSmodelling", "ROCR"] + "depends": ["Hmisc", "PBSmodelling", "ROCR", "lazyeval"] }, "PredictionR": { "name": "PredictionR", "version": "1.0-12", "sha256": "0kgc8rjdqskasdaxsbir9gwvm55rw5cpdg3y9nsj7ccg9fc1ji19", - "depends": ["fitdistrplus", "Renext"] + "depends": ["Renext", "fitdistrplus"] }, "PredictorSelect": { "name": "PredictorSelect", @@ -24645,20 +24903,20 @@ }, "PrettyCols": { "name": "PrettyCols", - "version": "1.0.1", - "sha256": "1q4l9138kdbk8m35k3am4qksi14rcfd793lplm3s1d17dh7zqb5f", - "depends": ["ggplot2", "purrr"] + "version": "1.1.0", + "sha256": "16r3bjrhdqpfbwlmiqp474wyj2pg6fnhql05carz1ayqga08pgwb", + "depends": ["ggplot2", "lifecycle"] }, "PrevMap": { "name": "PrevMap", "version": "1.5.4", "sha256": "12cw4dmbsnx9c4y5l5k0paqn1wwbxy9ciw46r254n5rd275fhksh", - "depends": ["lme4", "Matrix", "maxLik", "numDeriv", "pdist", "raster", "splancs", "truncnorm"] + "depends": ["Matrix", "lme4", "maxLik", "numDeriv", "pdist", "raster", "splancs", "truncnorm"] }, "PriceIndices": { "name": "PriceIndices", - "version": "0.1.9", - "sha256": "06mm2zn8j7jvqfmgw07q4rhpbp56y4w3jb03fwzkks9qavaimy4l", + "version": "0.2.0", + "sha256": "01r2pcq26kbz861gw2dg2crvc1dla8h7aknz7ym9ndk10v3gyl6r", "depends": ["caret", "dplyr", "ggplot2", "lubridate", "reclin2", "reshape", "strex", "stringr", "xgboost"] }, "PriorGen": { @@ -24675,9 +24933,9 @@ }, "ProAE": { "name": "ProAE", - "version": "0.2.15", - "sha256": "02k8ndqhmqixqprj8jsc41lj4hrgjm13m6nc310057kdrpvi8lhv", - "depends": ["DescTools", "dplyr", "ggnewscale", "ggpattern", "ggplot2", "ggtext", "gridExtra", "Hmisc", "magrittr"] + "version": "1.0.1", + "sha256": "1sgd5ws1jpnjsnx1daywsn3ygl6lmg048fgvc7i4nkkryq7zls6b", + "depends": ["DescTools", "Hmisc", "dplyr", "ggnewscale", "ggpattern", "ggplot2", "ggtext", "gridExtra", "kableExtra", "magrittr"] }, "ProDenICA": { "name": "ProDenICA", @@ -24689,7 +24947,7 @@ "name": "ProFAST", "version": "1.4", "sha256": "06643m0rr54v42sg16vp3dlfkvkjflqlmv2kv87c2n668gifxaw7", - "depends": ["AnnotationDbi", "biomaRt", "DR_SC", "furrr", "future", "ggplot2", "gtools", "harmony", "irlba", "Matrix", "mclust", "org_Hs_eg_db", "org_Mm_eg_db", "pbapply", "PRECAST", "Rcpp", "RcppArmadillo", "Seurat"] + "depends": ["AnnotationDbi", "DR_SC", "Matrix", "PRECAST", "Rcpp", "RcppArmadillo", "Seurat", "biomaRt", "furrr", "future", "ggplot2", "gtools", "harmony", "irlba", "mclust", "org_Hs_eg_db", "org_Mm_eg_db", "pbapply"] }, "ProPublicaR": { "name": "ProPublicaR", @@ -24701,25 +24959,25 @@ "name": "ProSGPV", "version": "1.0.0", "sha256": "1837p4vg1g4225rv55gaphma429j6pnfh078cxpv5ha2n0h1sfz3", - "depends": ["brglm2", "glmnet", "MASS", "survival"] + "depends": ["MASS", "brglm2", "glmnet", "survival"] }, "ProTrackR": { "name": "ProTrackR", "version": "0.4.3", "sha256": "08c53ndrfgaw8hxvrw13ypcbm62nlxgfnip7p9pivvlrjpiiryvj", - "depends": ["audio", "lattice", "signal", "tuneR", "XML"] + "depends": ["XML", "audio", "lattice", "signal", "tuneR"] }, "ProbBayes": { "name": "ProbBayes", "version": "1.1", "sha256": "0bkbqyrmpy9swaxsl91w6iiw81znjf1lk4b0vqgn6wdnrir6gkmn", - "depends": ["ggplot2", "gridExtra", "LearnBayes", "shiny"] + "depends": ["LearnBayes", "ggplot2", "gridExtra", "shiny"] }, "ProbBreed": { "name": "ProbBreed", - "version": "1.0.3.2", - "sha256": "150kbj6mkabgswxjg9adihz7i4paaknni49j2x9i7jyaw79iym78", - "depends": ["ggplot2", "lifecycle", "rlang", "rstan"] + "version": "1.0.4.1", + "sha256": "1m224wxzighadp8gdch4fg8pc5df4xphf75ixq6r99x7klp4mcah", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "lifecycle", "rlang", "rstan", "rstantools"] }, "ProbMarg": { "name": "ProbMarg", @@ -24749,19 +25007,19 @@ "name": "ProbitSpatial", "version": "1.1", "sha256": "1wa020hb02zjf4shzb345nyjkxm38wf67knvnl9iyh6n2sc34975", - "depends": ["Matrix", "numDeriv", "RANN", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "RANN", "Rcpp", "RcppEigen", "numDeriv"] }, "ProcData": { "name": "ProcData", "version": "0.3.2", "sha256": "1a0rbj57rbxf5axfyd1j9j1mh7ara3rlq31lysaprwaymig94mml", - "depends": ["keras", "Rcpp"] + "depends": ["Rcpp", "keras"] }, "ProcMod": { "name": "ProcMod", "version": "1.0.8", "sha256": "0rxh135gs9gq9sag1cmvywdgnax7n989gmffbxil71fy49kxpwdg", - "depends": ["foreach", "MASS", "Matrix", "permute", "Rdpack"] + "depends": ["MASS", "Matrix", "Rdpack", "foreach", "permute"] }, "ProfessR": { "name": "ProfessR", @@ -24795,15 +25053,15 @@ }, "ProjectTemplate": { "name": "ProjectTemplate", - "version": "0.10.4", - "sha256": "08idly6fdxhv2rx5s4309snvzpd9rhd5bq9vq4rw13hnvnbdzyya", + "version": "0.11.0", + "sha256": "1898dfrfrilpa9gackifgnyf5m5j6r9359c7m8avcxn0qsygiviz", "depends": ["digest", "tibble"] }, "ProjectionBasedClustering": { "name": "ProjectionBasedClustering", "version": "1.2.2", "sha256": "0v3w5bfmvc36bf19p1lp13p574xlbjq0gg43mwm598cnyqsw12xq", - "depends": ["deldir", "GeneralizedUmatrix", "geometry", "ggplot2", "plotly", "Rcpp", "shiny", "shinyjs", "shinythemes", "vegan"] + "depends": ["GeneralizedUmatrix", "Rcpp", "deldir", "geometry", "ggplot2", "plotly", "shiny", "shinyjs", "shinythemes", "vegan"] }, "ProliferativeIndex": { "name": "ProliferativeIndex", @@ -24863,7 +25121,7 @@ "name": "PsychWordVec", "version": "2023.9", "sha256": "04dp4k0x2nmcfiqbyzirhr595lgishxh0qbymy210g96sghbrpf3", - "depends": ["bruceR", "cli", "corrplot", "data_table", "dplyr", "fastTextR", "ggplot2", "ggrepel", "psych", "purrr", "qgraph", "reticulate", "rgl", "rsparse", "Rtsne", "stringr", "text", "text2vec", "vroom", "word2vec"] + "depends": ["Rtsne", "bruceR", "cli", "corrplot", "data_table", "dplyr", "fastTextR", "ggplot2", "ggrepel", "psych", "purrr", "qgraph", "reticulate", "rgl", "rsparse", "stringr", "text", "text2vec", "vroom", "word2vec"] }, "PtProcess": { "name": "PtProcess", @@ -24873,9 +25131,9 @@ }, "PubChemR": { "name": "PubChemR", - "version": "1.2", - "sha256": "00x9hm6mibla8ngwqx29n2v7zy4ichbymm4ahsg4r96c3hpp331z", - "depends": ["dplyr", "httr", "magick", "magrittr", "png", "RCurl", "RJSONIO", "rsvg", "stringr", "tibble", "tidyr", "XML", "xml2"] + "version": "2.0", + "sha256": "0c8n77r0yxjcb217xgalrvfwhajzkk7h0kfsg6k8jhvlvfrj7n00", + "depends": ["RCurl", "RJSONIO", "dplyr", "httr", "magick", "magrittr", "png", "rsvg", "stringr", "testthat", "tibble", "tidyr"] }, "PubMedMining": { "name": "PubMedMining", @@ -24887,7 +25145,7 @@ "name": "PubMedWordcloud", "version": "0.3.6", "sha256": "1wfp1fpr4an7psrwidx38brvhvghmvfsgjy4gdx81p1bdsdn2kw2", - "depends": ["RColorBrewer", "RCurl", "stringr", "tm", "wordcloud", "XML"] + "depends": ["RColorBrewer", "RCurl", "XML", "stringr", "tm", "wordcloud"] }, "PublicWorksFinanceIT": { "name": "PublicWorksFinanceIT", @@ -24899,7 +25157,7 @@ "name": "PublicationBias", "version": "2.4.0", "sha256": "1nwkp5czv31v57qzaahj18lkw557a48qcnwrz6lmz9hw74b52qm6", - "depends": ["dplyr", "ggplot2", "glue", "lifecycle", "metabias", "metafor", "Rdpack", "rlang", "robumeta"] + "depends": ["Rdpack", "dplyr", "ggplot2", "glue", "lifecycle", "metabias", "metafor", "rlang", "robumeta"] }, "Publish": { "name": "Publish", @@ -24911,7 +25169,7 @@ "name": "PupilPre", "version": "0.6.2", "sha256": "123m1zqld0jl26vqz41iic7vxzyfs1aw8zi5ki2cy6wzw9ss87m6", - "depends": ["dplyr", "ggplot2", "mgcv", "rlang", "robustbase", "shiny", "signal", "tidyr", "VWPre", "zoo"] + "depends": ["VWPre", "dplyr", "ggplot2", "mgcv", "rlang", "robustbase", "shiny", "signal", "tidyr", "zoo"] }, "PupillometryR": { "name": "PupillometryR", @@ -24919,16 +25177,22 @@ "sha256": "0jqpx5g0fjdxxp7wlgv4jm5vrhchm6r21qd7i825fi5552c46awv", "depends": ["dplyr", "fda", "ggplot2", "itsadug", "mgcv", "rlang", "signal", "stringr", "tidyr", "zoo"] }, + "PurpleAir": { + "name": "PurpleAir", + "version": "1.0.0", + "sha256": "0xsqd839x55m7wmr2knznqyrmvpa5kcxi16izxl5h2539diqssjx", + "depends": ["cli", "dplyr", "glue", "httr2", "purrr", "rlang", "tibble"] + }, "Pursuit": { "name": "Pursuit", - "version": "1.0.4", - "sha256": "0pgx2vfvfgf0gndgnawk91hd13q39f0855hj1ivq30id91ym421r", + "version": "1.0.5", + "sha256": "1wg1ix466zcbcgr2qqa6sbh9blx5g8hjqmagf9z3ig06qgxf1zrr", "depends": ["MASS"] }, "PwrGSD": { "name": "PwrGSD", - "version": "2.3.6", - "sha256": "1sxm4g4hrnn7rqxgx4pi98jlh15a8hm8jnrnmcyi2yj86x5l35r0", + "version": "2.3.7", + "sha256": "0gxyx2z4yjqvivwslb31ai2vpg664p6pvyhz23s9n43wlqahvjg1", "depends": ["survival"] }, "PxWebApiData": { @@ -24959,7 +25223,7 @@ "name": "QBMS", "version": "1.0.0", "sha256": "0kxhww5vvl4giap8fyymmk873j73waixa1dzg9cb6hqk3816vwqm", - "depends": ["DBI", "httr", "jsonlite", "RNetCDF", "RSQLite", "terra"] + "depends": ["DBI", "RNetCDF", "RSQLite", "httr", "jsonlite", "terra"] }, "QCA": { "name": "QCA", @@ -24971,7 +25235,7 @@ "name": "QCAcluster", "version": "0.1.0", "sha256": "094p11c9arry793zibr8x3xhpbrym9bfky95nds53g3yliprdd63", - "depends": ["data_table", "magrittr", "plyr", "purrr", "QCA", "rlist", "stringi", "testit", "UpSetR"] + "depends": ["QCA", "UpSetR", "data_table", "magrittr", "plyr", "purrr", "rlist", "stringi", "testit"] }, "QCApro": { "name": "QCApro", @@ -24983,7 +25247,7 @@ "name": "QCAtools", "version": "0.2.3", "sha256": "1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2", - "depends": ["directlabels", "ggplot2", "QCA", "stringr"] + "depends": ["QCA", "directlabels", "ggplot2", "stringr"] }, "QCEWAS": { "name": "QCEWAS", @@ -25031,7 +25295,7 @@ "name": "QFASA", "version": "1.2.0", "sha256": "1dhnfr4f5ij3irkragyllfjqisgm27phk40c9i539vm6046sc2w2", - "depends": ["boot", "bootstrap", "Compositional", "compositions", "dplyr", "futile_logger", "gamlss", "gamlss_dist", "MASS", "mvtnorm", "Rcpp", "RcppEigen", "Rsolnp", "TMB", "vegan"] + "depends": ["Compositional", "MASS", "Rcpp", "RcppEigen", "Rsolnp", "TMB", "boot", "bootstrap", "compositions", "dplyr", "futile_logger", "gamlss", "gamlss_dist", "mvtnorm", "vegan"] }, "QFRM": { "name": "QFRM", @@ -25049,7 +25313,7 @@ "name": "QGameTheory", "version": "0.1.2", "sha256": "0h3qkb0zg6km3s89bjnv9503hgcng4wfywfy1x5dsbj5azs9hs5w", - "depends": ["dplyr", "R_utils", "RColorBrewer"] + "depends": ["RColorBrewer", "R_utils", "dplyr"] }, "QGglmm": { "name": "QGglmm", @@ -25067,7 +25331,7 @@ "name": "QHScrnomo", "version": "3.0.1", "sha256": "1axl0scvk5q127rcffdfv8k9ikvq0wamrbnqaimm3smcyfbcyyqm", - "depends": ["cmprsk", "Hmisc", "rms"] + "depends": ["Hmisc", "cmprsk", "rms"] }, "QI": { "name": "QI", @@ -25109,7 +25373,7 @@ "name": "QRM", "version": "0.4-31", "sha256": "15dyk3zfy92vj4xny04dh5mqcyb8qh61566m313qs17mxwibvn2a", - "depends": ["gsl", "Matrix", "mgcv", "mvtnorm", "numDeriv", "Rcpp", "timeDate", "timeSeries"] + "depends": ["Matrix", "Rcpp", "gsl", "mgcv", "mvtnorm", "numDeriv", "timeDate", "timeSeries"] }, "QRank": { "name": "QRank", @@ -25121,7 +25385,7 @@ "name": "QRegVCM", "version": "1.2", "sha256": "0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq", - "depends": ["quantreg", "SparseM", "truncSP"] + "depends": ["SparseM", "quantreg", "truncSP"] }, "QSARdata": { "name": "QSARdata", @@ -25139,18 +25403,18 @@ "name": "QTL.gCIMapping", "version": "3.4", "sha256": "17f2xmgklbi8kicv7v951zm3bf1q4bdx9lcfbxpac3i7xm985fgr", - "depends": ["data_table", "doParallel", "foreach", "glmnet", "lars", "MASS", "openxlsx", "qtl", "Rcpp", "readxl", "stringr"] + "depends": ["MASS", "Rcpp", "data_table", "doParallel", "foreach", "glmnet", "lars", "openxlsx", "qtl", "readxl", "stringr"] }, "QTL_gCIMapping_GUI": { "name": "QTL.gCIMapping.GUI", "version": "2.1.1", "sha256": "0a155vl869i3li2i67b89p056x50ycqp9yk0ll5g3fp3xcdl80zs", - "depends": ["data_table", "doParallel", "foreach", "glmnet", "MASS", "openxlsx", "qtl", "QTL_gCIMapping", "Rcpp", "shiny", "stringr"] + "depends": ["MASS", "QTL_gCIMapping", "Rcpp", "data_table", "doParallel", "foreach", "glmnet", "openxlsx", "qtl", "shiny", "stringr"] }, "QTLEMM": { "name": "QTLEMM", - "version": "1.5.4", - "sha256": "0ha8ivwpjvymg143fdmg0w5kp2yf18alk00iq7y5i4qxdyyhyjpw", + "version": "2.1.0", + "sha256": "1w2h094ihvfybaq7gr9l0x6b1d81yvf921rki1bz263jbc9x57h3", "depends": ["gtools", "mvtnorm"] }, "QTLRel": { @@ -25163,19 +25427,19 @@ "name": "QTOCen", "version": "0.1.1", "sha256": "0wlbxk1rd56k02jf3pfzbx6xx5mmf6sb7gvds0067cvb7m42ghcr", - "depends": ["MatrixModels", "quantreg", "Rdpack", "rgenoud", "survival"] + "depends": ["MatrixModels", "Rdpack", "quantreg", "rgenoud", "survival"] }, "QUALYPSO": { "name": "QUALYPSO", "version": "2.3", "sha256": "1nbkbc5lcglrpp4k3jphdzqr9xl5kgdv6sg05ibdcwidn6bk3y5l", - "depends": ["expm", "MASS", "Rfast"] + "depends": ["MASS", "Rfast", "expm"] }, "QWDAP": { "name": "QWDAP", "version": "1.1.18", "sha256": "1i1g83k2fr0c7kchwpsyxxfhi6kvbdqg8caff9ly0crdzar5xrc4", - "depends": ["CORElearn", "pls", "Rcpp", "RcppEigen"] + "depends": ["CORElearn", "Rcpp", "RcppEigen", "pls"] }, "QZ": { "name": "QZ", @@ -25223,7 +25487,7 @@ "name": "Qtools", "version": "1.5.9", "sha256": "167c8mfj0if4j9m3rjbi1gnhwypq5ky297zyb437p42b3856qagi", - "depends": ["boot", "conquer", "glmx", "gtools", "MASS", "Matrix", "np", "numDeriv", "quantdr", "quantreg", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "boot", "conquer", "glmx", "gtools", "np", "numDeriv", "quantdr", "quantreg"] }, "QuClu": { "name": "QuClu", @@ -25247,7 +25511,7 @@ "name": "QuadratiK", "version": "1.1.1", "sha256": "0pjg0j0hb5v6gxlg4lv1ddrwbrvp91ah3rxm6y7mjclg3ff47g16", - "depends": ["cluster", "clusterRepro", "doParallel", "foreach", "ggplot2", "ggpp", "ggpubr", "mclust", "moments", "movMF", "mvtnorm", "Rcpp", "RcppEigen", "rgl", "rlecuyer", "rrcov", "sn", "Tinflex"] + "depends": ["Rcpp", "RcppEigen", "Tinflex", "cluster", "clusterRepro", "doParallel", "foreach", "ggplot2", "ggpp", "ggpubr", "mclust", "moments", "movMF", "mvtnorm", "rgl", "rlecuyer", "rrcov", "sn"] }, "Quandl": { "name": "Quandl", @@ -25259,7 +25523,7 @@ "name": "QuantBondCurves", "version": "0.3.0", "sha256": "1w6zlf8wvfh4568aa0l9l3p502hjmj8lhnkagv6dqg332jz0ikhr", - "depends": ["lubridate", "quantdates", "Rsolnp"] + "depends": ["Rsolnp", "lubridate", "quantdates"] }, "QuantNorm": { "name": "QuantNorm", @@ -25271,19 +25535,19 @@ "name": "QuantPsyc", "version": "1.6", "sha256": "1dbj830p5837fiwa800nzsaf19lf95vc3n7jmds2q9v06mrz6syq", - "depends": ["boot", "dplyr", "MASS", "purrr"] + "depends": ["MASS", "boot", "dplyr", "purrr"] }, "QuantRegGLasso": { "name": "QuantRegGLasso", "version": "1.0.0", "sha256": "0jjjrkj45148s2rymvgzkqpbg2bw7nvf3851153qpl8kp13mxgr1", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2"] }, "QuantileGH": { "name": "QuantileGH", "version": "0.1.7", "sha256": "0zsdvvx567dq17b5n9rdx2qmnm0ph9qnvffmgh7n4csz0c1ca4xg", - "depends": ["fmx", "mixtools", "tclust", "TukeyGH77"] + "depends": ["TukeyGH77", "fmx", "mixtools", "tclust"] }, "QuantileGradeR": { "name": "QuantileGradeR", @@ -25307,43 +25571,43 @@ "name": "Quartet", "version": "1.2.6", "sha256": "1qrhjxqg3899kw58irnqs7sj6n9ixyx71gaf1whld8xpj89dsz7f", - "depends": ["ape", "Rcpp", "Rdpack", "Ternary", "TreeTools", "viridisLite"] + "depends": ["Rcpp", "Rdpack", "Ternary", "TreeTools", "ape", "viridisLite"] }, "QuickJSR": { "name": "QuickJSR", - "version": "1.2.2", - "sha256": "1vb8b591imq737zin77sh3icld87pqk5mssmn7ddzj45cn22z12i", + "version": "1.3.1", + "sha256": "1lcg437b93yvbk4q63m2sh8ih4p2b6505invmjbyqf58hip9sm8h", "depends": [] }, "QurvE": { "name": "QurvE", "version": "1.1.1", "sha256": "0md97jgyl7lkq46zsl6svgdhyg95is92f8yn5szkaylfdb2cglg3", - "depends": ["doParallel", "dplyr", "drc", "DT", "foreach", "ggh4x", "ggnewscale", "ggplot2", "ggpubr", "kableExtra", "knitr", "labeling", "magrittr", "minpack_lm", "plyr", "purrr", "RColorBrewer", "readxl", "rmarkdown", "scales", "shiny", "stringr", "tidyr"] + "depends": ["DT", "RColorBrewer", "doParallel", "dplyr", "drc", "foreach", "ggh4x", "ggnewscale", "ggplot2", "ggpubr", "kableExtra", "knitr", "labeling", "magrittr", "minpack_lm", "plyr", "purrr", "readxl", "rmarkdown", "scales", "shiny", "stringr", "tidyr"] }, "Qval": { "name": "Qval", - "version": "0.1.6", - "sha256": "134cahaarly5qbdycm0s52fkxfk0pylg5g3k9sq5y6law8yb5q7v", - "depends": ["GDINA", "glmnet", "Matrix", "nloptr", "plyr"] + "version": "0.1.7", + "sha256": "02wvj7n3zbn13mn48gxd57kfkcbx9740ca2nl0yl15nfj45c21zh", + "depends": ["GDINA", "Matrix", "glmnet", "nloptr", "plyr"] }, "R_cache": { "name": "R.cache", "version": "0.16.0", "sha256": "14cja0d78mzipb94cwgdl00k5r7awjclzxl30c77j6jpc68l0lvq", - "depends": ["digest", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_methodsS3", "R_oo", "R_utils", "digest"] }, "R_devices": { "name": "R.devices", "version": "2.17.2", "sha256": "15gcvhmqwqyl3n299l9znwcjri8d8vixwwv915162sfxabsylgj0", - "depends": ["base64enc", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_methodsS3", "R_oo", "R_utils", "base64enc"] }, "R_filesets": { "name": "R.filesets", "version": "2.15.1", "sha256": "1qwxk3p56yq06nsdl0jwbw6j8r6qjakznsd3z63gnpsgkckfkx88", - "depends": ["digest", "R_cache", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_cache", "R_methodsS3", "R_oo", "R_utils", "digest"] }, "R_huge": { "name": "R.huge", @@ -25373,13 +25637,13 @@ "name": "R.rsp", "version": "0.46.0", "sha256": "1frkgjc2mzvjnay8g5nky1bvxv60wvsypmmdj6mbsfjnzq7ni7qs", - "depends": ["digest", "R_cache", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_cache", "R_methodsS3", "R_oo", "R_utils", "digest"] }, "R_temis": { "name": "R.temis", "version": "0.1.3", "sha256": "1qa381fv1hxd1fv9d22772aibiia6m2ycm69znjy3ah2w986hjfh", - "depends": ["crayon", "explor", "FactoMineR", "igraph", "NLP", "slam", "SnowballC", "stringi", "testthat", "tm", "tm_plugin_alceste", "tm_plugin_europresse", "tm_plugin_factiva", "tm_plugin_lexisnexis", "wordcloud"] + "depends": ["FactoMineR", "NLP", "SnowballC", "crayon", "explor", "igraph", "slam", "stringi", "testthat", "tm", "tm_plugin_alceste", "tm_plugin_europresse", "tm_plugin_factiva", "tm_plugin_lexisnexis", "wordcloud"] }, "R_utils": { "name": "R.utils", @@ -25403,7 +25667,7 @@ "name": "R2Addhaz", "version": "0.1.0", "sha256": "1xaqbzq2chsgkg1gc163fq8qcgzq9wwn2bm4mwvc31ay0gg4f3xi", - "depends": ["ahaz", "caTools", "pracma", "Rdpack", "survival", "zoo"] + "depends": ["Rdpack", "ahaz", "caTools", "pracma", "survival", "zoo"] }, "R2BEAT": { "name": "R2BEAT", @@ -25433,7 +25697,7 @@ "name": "R2MLwiN", "version": "0.8-9", "sha256": "0zzvpsmcfvnr6v0dg5dbfz8sx2h2m6krkb0q8bxxlj552nn2qvgr", - "depends": ["broom", "coda", "digest", "doParallel", "foreach", "foreign", "lattice", "Matrix", "memisc", "R2WinBUGS", "texreg", "tibble"] + "depends": ["Matrix", "R2WinBUGS", "broom", "coda", "digest", "doParallel", "foreach", "foreign", "lattice", "memisc", "texreg", "tibble"] }, "R2OpenBUGS": { "name": "R2OpenBUGS", @@ -25469,13 +25733,13 @@ "name": "R2jags", "version": "0.8-5", "sha256": "1k895xmlrq8k34s0yc06mjkay8gj2r80sfn4rpqql09j6vr1za3i", - "depends": ["abind", "coda", "R2WinBUGS", "rjags", "stringr"] + "depends": ["R2WinBUGS", "abind", "coda", "rjags", "stringr"] }, "R2sample": { "name": "R2sample", "version": "1.1.0", "sha256": "18v7i0h4jbnyd08c24sr8fydk209fp76hc2k7yivva616m5c4s2d", - "depends": ["ggplot2", "microbenchmark", "Rcpp", "shiny"] + "depends": ["Rcpp", "ggplot2", "microbenchmark", "shiny"] }, "R2ucare": { "name": "R2ucare", @@ -25493,7 +25757,7 @@ "name": "R4CouchDB", "version": "0.7.5", "sha256": "1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz", - "depends": ["bitops", "RCurl", "RJSONIO"] + "depends": ["RCurl", "RJSONIO", "bitops"] }, "R6": { "name": "R6", @@ -25517,13 +25781,13 @@ "name": "R6P", "version": "0.3.0", "sha256": "18qy69zwyzp27fiqlplcjh0034d2pn9dhnfkraarh4jxnbi7masm", - "depends": ["collections", "dplyr", "purrr", "R6", "stringr", "tibble", "tidyr"] + "depends": ["R6", "collections", "dplyr", "purrr", "stringr", "tibble", "tidyr"] }, "R6causal": { "name": "R6causal", "version": "0.8.3", "sha256": "0qi569gsjhslg7xk2xjcglnighlfpdr5yzfb4hajq57w49p310zf", - "depends": ["causaleffect", "cfid", "data_table", "dosearch", "glue", "igraph", "MASS", "R6"] + "depends": ["MASS", "R6", "causaleffect", "cfid", "data_table", "dosearch", "glue", "igraph"] }, "RABR": { "name": "RABR", @@ -25547,19 +25811,19 @@ "name": "RAFS", "version": "0.2.4", "sha256": "02s4p7hsjm2znj5rcfrd2cqwynd03p8zbby8qxnfxr3hp5ggq7hr", - "depends": ["fastcluster", "MDFS", "splitTools"] + "depends": ["MDFS", "fastcluster", "splitTools"] }, "RAINBOWR": { "name": "RAINBOWR", "version": "0.1.35", "sha256": "0cpjjnjfv53q0cwgia5fbay4n02z0q26jjr2p7c7rpykd382lr7c", - "depends": ["ape", "cluster", "expm", "gaston", "here", "htmlwidgets", "MASS", "Matrix", "MM4LMM", "optimx", "pbmcapply", "pegas", "R_utils", "Rcpp", "RcppEigen", "Rfast", "rrBLUP", "stringr"] + "depends": ["MASS", "MM4LMM", "Matrix", "R_utils", "Rcpp", "RcppEigen", "Rfast", "ape", "cluster", "expm", "gaston", "here", "htmlwidgets", "optimx", "pbmcapply", "pegas", "rrBLUP", "stringr"] }, "RALSA": { "name": "RALSA", - "version": "1.4.5", - "sha256": "1bg2s12803q2rayjmwbksm7ncpb6lbhhx9b6zj8gd12n8dxn0syy", - "depends": ["data_table", "DT", "foreign", "ggplot2", "haven", "Hmisc", "openxlsx", "r_import", "rclipboard", "readr", "rstudioapi", "shiny", "shinydashboard", "shinyFiles", "shinyjs", "shinyWidgets", "stringi", "stringr"] + "version": "1.4.7", + "sha256": "1m9fp1y5fgyngm5n6kgwfdpr8pnczs250hy63dd3ld3n50qdmc4l", + "depends": ["DT", "Hmisc", "data_table", "foreign", "ggplot2", "haven", "openxlsx", "r_import", "rclipboard", "readr", "rstudioapi", "shiny", "shinyFiles", "shinyWidgets", "shinydashboard", "shinyjs", "stringi", "stringr"] }, "RAMClustR": { "name": "RAMClustR", @@ -25577,13 +25841,13 @@ "name": "RAMpath", "version": "0.5.1", "sha256": "0dp5illypz3qdj2qmn47wy208mcjhkkwvw8yq2spzcsn55l8f0nx", - "depends": ["ellipse", "lavaan", "MASS"] + "depends": ["MASS", "ellipse", "lavaan"] }, "RANKS": { "name": "RANKS", "version": "1.1", "sha256": "1c7khw2rxf88cycy81kqxyg7rzb9f8ns8n5x24zzjdvsws77fshq", - "depends": ["graph", "limma", "NetPreProc", "PerfMeas", "RBGL"] + "depends": ["NetPreProc", "PerfMeas", "RBGL", "graph", "limma"] }, "RANN": { "name": "RANN", @@ -25607,13 +25871,13 @@ "name": "RARfreq", "version": "0.1.5", "sha256": "05yb1hkhqq5x4q34z6kvdd6s8iy90528zypbc2pjhhb264v5k8qd", - "depends": ["data_table", "dplyr", "ggplot2", "latex2exp", "magrittr", "patchwork", "Rdpack", "reshape2", "tidyr"] + "depends": ["Rdpack", "data_table", "dplyr", "ggplot2", "latex2exp", "magrittr", "patchwork", "reshape2", "tidyr"] }, "RARtrials": { "name": "RARtrials", "version": "0.0.1", "sha256": "03hfbr08f4wbb8apfdqg32118615zzyaihvriqsfr7q2qxy4byla", - "depends": ["pins", "Rdpack"] + "depends": ["Rdpack", "pins"] }, "RAT": { "name": "RAT", @@ -25655,7 +25919,7 @@ "name": "RAthena", "version": "2.6.1", "sha256": "1zncmkx93c28z0xf4n5rdc7fzlrdqw3x9ab2ci07f00gjf9gwkf1", - "depends": ["data_table", "DBI", "reticulate", "uuid"] + "depends": ["DBI", "data_table", "reticulate", "uuid"] }, "RBE3": { "name": "RBE3", @@ -25679,19 +25943,19 @@ "name": "RBPcurve", "version": "1.2", "sha256": "0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782", - "depends": ["BBmisc", "checkmate", "mlr", "shape", "TeachingDemos"] + "depends": ["BBmisc", "TeachingDemos", "checkmate", "mlr", "shape"] }, "RBaseX": { "name": "RBaseX", "version": "1.1.2", "sha256": "1f7lgfsxwqjplv8kk81sw3zmwqi9kxc8g328ylb2c2hiyq4fg49k", - "depends": ["data_table", "dplyr", "httr", "magrittr", "openssl", "pingr", "R6", "RCurl", "rex", "stringr", "tibble"] + "depends": ["R6", "RCurl", "data_table", "dplyr", "httr", "magrittr", "openssl", "pingr", "rex", "stringr", "tibble"] }, "RBesT": { "name": "RBesT", "version": "1.7-3", "sha256": "19bhn1j03qsmc20xndyls0ynhqbwb3kis6mxm7wh9k87zcm1lvla", - "depends": ["abind", "assertthat", "bayesplot", "BH", "checkmate", "dplyr", "Formula", "ggplot2", "matrixStats", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "abind", "assertthat", "bayesplot", "checkmate", "dplyr", "ggplot2", "matrixStats", "mvtnorm", "rlang", "rstan", "rstantools"] }, "RBtest": { "name": "RBtest", @@ -25721,7 +25985,7 @@ "name": "RCBR", "version": "0.6.2", "sha256": "08rcnvdbavcww2cpl052ca93lbzkza7q6jlr4namdpzmf22z7bma", - "depends": ["Formula", "Matrix", "mvtnorm", "orthopolynom", "REBayes", "Rmosek"] + "depends": ["Formula", "Matrix", "REBayes", "Rmosek", "mvtnorm", "orthopolynom"] }, "RCCPCA": { "name": "RCCPCA", @@ -25733,7 +25997,7 @@ "name": "RCDT", "version": "1.3.0", "sha256": "1k27kydqzxqdhjbygq5a8mdhwlvbc32j1hg4vr223rwwc94864w6", - "depends": ["BH", "colorsGen", "gplots", "Polychrome", "Rcpp", "RcppArmadillo", "rgl", "Rvcg"] + "depends": ["BH", "Polychrome", "Rcpp", "RcppArmadillo", "Rvcg", "colorsGen", "gplots", "rgl"] }, "RCEIM": { "name": "RCEIM", @@ -25745,13 +26009,13 @@ "name": "RCGLS", "version": "1.0.3", "sha256": "12mmfs91fmhdxdxr7q16hnjlg7bz2bbkf8chld4cyf8clnflzvsj", - "depends": ["ncdf4", "raster", "RCurl", "sp"] + "depends": ["RCurl", "ncdf4", "raster", "sp"] }, "RCLabels": { "name": "RCLabels", "version": "0.1.10", "sha256": "0nb1032mlqbs9aslq4hsmahfn3bp1qvg26pfbgk784rj64ibd6gz", - "depends": ["assertthat", "Hmisc", "magrittr", "purrr"] + "depends": ["Hmisc", "assertthat", "magrittr", "purrr"] }, "RCMinification": { "name": "RCMinification", @@ -25761,15 +26025,15 @@ }, "RCPA": { "name": "RCPA", - "version": "0.2.2", - "sha256": "116qb2zqlw6jsxz5mn7s35nv3d27kzpfjmnqk3whh9r91dkdhfyk", - "depends": ["AnnotationDbi", "Biobase", "BiocManager", "DESeq2", "dplyr", "edgeR", "GEOquery", "ggnewscale", "ggpattern", "ggplot2", "ggrepel", "graph", "httr", "IRdisplay", "jsonlite", "limma", "rlang", "RobustRankAggreg", "scales", "stringr", "SummarizedExperiment", "tidyr"] + "version": "0.2.3", + "sha256": "0jk53sqcjy6a2ydv4b2ai57lbpjpva1ssmfqgzb3nl7j8iqk2ggl", + "depends": ["AnnotationDbi", "Biobase", "BiocManager", "DESeq2", "GEOquery", "IRdisplay", "RobustRankAggreg", "SummarizedExperiment", "dplyr", "edgeR", "ggnewscale", "ggpattern", "ggplot2", "ggrepel", "graph", "httr", "jsonlite", "limma", "rlang", "scales", "stringr", "tidyr"] }, "RCPA3": { "name": "RCPA3", "version": "1.2.1", "sha256": "1xcrlnd41r9f7p4ql258hjh81alzah1p19pk9kady0ardp0xq1zz", - "depends": ["beepr", "car", "descr", "haven", "Hmisc", "knitr", "lmtest", "survey", "weights"] + "depends": ["Hmisc", "beepr", "car", "descr", "haven", "knitr", "lmtest", "survey", "weights"] }, "RCRnorm": { "name": "RCRnorm", @@ -25787,7 +26051,7 @@ "name": "RCT", "version": "1.2", "sha256": "0yq0jiavkplfm1swa1zd83rwl34h5p33cj3lsmj5aplpg1pbbvvh", - "depends": ["broom", "dplyr", "estimatr", "forcats", "ggplot2", "glue", "magrittr", "MASS", "pracma", "purrr", "rlang", "stringr", "tidyr", "tidyselect"] + "depends": ["MASS", "broom", "dplyr", "estimatr", "forcats", "ggplot2", "glue", "magrittr", "pracma", "purrr", "rlang", "stringr", "tidyr", "tidyselect"] }, "RCT2": { "name": "RCT2", @@ -25799,13 +26063,13 @@ "name": "RCTS", "version": "0.2.4", "sha256": "0wx0c9sk8y1frjwifgszzp38yx5lmwndhvixbak1kcjw5n02rkyj", - "depends": ["cellWise", "dplyr", "ggplot2", "magrittr", "ncvreg", "purrr", "Rdpack", "rlang", "robustbase", "stringr", "tibble", "tidyr"] + "depends": ["Rdpack", "cellWise", "dplyr", "ggplot2", "magrittr", "ncvreg", "purrr", "rlang", "robustbase", "stringr", "tibble", "tidyr"] }, "RCTrep": { "name": "RCTrep", "version": "1.2.0", "sha256": "1miqidpn8a3wv6pd4xqsnk9gzdsvdwdzsm656ass67jgyzzh2c9h", - "depends": ["BART", "caret", "copula", "dplyr", "fastDummies", "geex", "ggplot2", "ggpubr", "glue", "MatchIt", "mvtnorm", "numDeriv", "PSweight", "R6", "shiny", "shinydashboard", "tidyr"] + "depends": ["BART", "MatchIt", "PSweight", "R6", "caret", "copula", "dplyr", "fastDummies", "geex", "ggplot2", "ggpubr", "glue", "mvtnorm", "numDeriv", "shiny", "shinydashboard", "tidyr"] }, "RCarb": { "name": "RCarb", @@ -25835,7 +26099,7 @@ "name": "RClickhouse", "version": "0.6.9", "sha256": "06r3xn3xjhr2adpmh4cpykbx1ly5i7aw4izcg2xci7cm5xbg2vzl", - "depends": ["bit64", "cli", "DBI", "dbplyr", "dplyr", "Rcpp"] + "depends": ["DBI", "Rcpp", "bit64", "cli", "dbplyr", "dplyr"] }, "RClimacell": { "name": "RClimacell", @@ -25877,12 +26141,12 @@ "name": "RCriteo", "version": "1.0.2", "sha256": "1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy", - "depends": ["httr", "plyr", "RCurl", "XML"] + "depends": ["RCurl", "XML", "httr", "plyr"] }, "RCurl": { "name": "RCurl", - "version": "1.98-1.14", - "sha256": "1kq3ydvm7hvy8pxk9iy13pkq5mxyxqlx4mpjsadzl7a7jj32gbgf", + "version": "1.98-1.16", + "sha256": "19qddkyasfwa61mj0r0m4wk2xhpsqxf2dikih0s1fdjr207c938s", "depends": ["bitops"] }, "RCytoGPS": { @@ -25893,8 +26157,8 @@ }, "RCzechia": { "name": "RCzechia", - "version": "1.12.0", - "sha256": "1yvwnxab3h1ai2nr8aaw5hbp13a4ayq4cq2f5sbzx1x8szq97sni", + "version": "1.12.2", + "sha256": "0qkg307cik7bvhgi8rm8h27pv1247559ndk39r4mjf6wql7bylwb", "depends": ["curl", "httr", "jsonlite", "magrittr", "sf"] }, "RDHonest": { @@ -25913,7 +26177,7 @@ "name": "RDML", "version": "1.0", "sha256": "13ly1p42njbcygwvkyii8sjqbsywjy5w5g1kd7m8kswi5dsk3qqv", - "depends": ["checkmate", "data_table", "lubridate", "pipeR", "R6", "readxl", "rlist", "stringr", "xml2"] + "depends": ["R6", "checkmate", "data_table", "lubridate", "pipeR", "readxl", "rlist", "stringr", "xml2"] }, "RDP": { "name": "RDP", @@ -25925,7 +26189,7 @@ "name": "RDS", "version": "0.9-9", "sha256": "02gd6jara1hi6h9rqcxb0an9dvnvajdi1x10cf3kqfvaa0i64igf", - "depends": ["anytime", "ergm", "ggplot2", "gridExtra", "Hmisc", "igraph", "isotone", "network", "reshape2", "scales", "statnet_common"] + "depends": ["Hmisc", "anytime", "ergm", "ggplot2", "gridExtra", "igraph", "isotone", "network", "reshape2", "scales", "statnet_common"] }, "RDSsamplesize": { "name": "RDSsamplesize", @@ -25949,7 +26213,7 @@ "name": "RDnp", "version": "1.3", "sha256": "1a10afwn41c0sd35i2hywg79gyf55nd212rfq5pv5inqdrr7kxym", - "depends": ["cellWise", "MASS"] + "depends": ["MASS", "cellWise"] }, "RDota2": { "name": "RDota2", @@ -25965,9 +26229,9 @@ }, "REBayes": { "name": "REBayes", - "version": "2.54", - "sha256": "1kg105jnc7hjxihvrjcfklz6i29kznz9aqh6303v9v6hfmy6a094", - "depends": ["lattice", "Matrix"] + "version": "2.56", + "sha256": "0wfqibyzj3kcydsv2jr8x5pmcrig9y7183r7raqnqkss9iy60qyj", + "depends": ["Matrix", "lattice"] }, "RECA": { "name": "RECA", @@ -25979,13 +26243,13 @@ "name": "REDCapCAST", "version": "24.6.1", "sha256": "18s85ryg5mr7cv1j4938ax7v3b8fsrbaaa5lv191h0ixwkyz5cp9", - "depends": ["assertthat", "dplyr", "haven", "keyring", "openxlsx2", "purrr", "readODS", "readr", "REDCapR", "shiny", "tidyr", "tidyselect", "zip"] + "depends": ["REDCapR", "assertthat", "dplyr", "haven", "keyring", "openxlsx2", "purrr", "readODS", "readr", "shiny", "tidyr", "tidyselect", "zip"] }, "REDCapDM": { "name": "REDCapDM", "version": "0.9.9", "sha256": "1xpl5n046cj7r8rlkffmsfdffs0q0av2c13zw5v6agr265y3d33j", - "depends": ["cli", "dplyr", "forcats", "janitor", "labelled", "magrittr", "openxlsx", "purrr", "REDCapR", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["REDCapR", "cli", "dplyr", "forcats", "janitor", "labelled", "magrittr", "openxlsx", "purrr", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect"] }, "REDCapExporter": { "name": "REDCapExporter", @@ -26003,7 +26267,7 @@ "name": "REDCapTidieR", "version": "1.1.1", "sha256": "0a7q2mfnjfyfkdafvvl7y69c52qh8wsqrygv77wnrjl4kjf80gwv", - "depends": ["checkmate", "cli", "dplyr", "formattable", "lobstr", "lubridate", "pillar", "purrr", "readr", "REDCapR", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["REDCapR", "checkmate", "cli", "dplyr", "formattable", "lobstr", "lubridate", "pillar", "purrr", "readr", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "REDI": { "name": "REDI", @@ -26033,7 +26297,7 @@ "name": "REMLA", "version": "1.1", "sha256": "1j094h38047vlbql8vvlbbdnwxqpw7vnvc08qa2c95jqw8kvhwa6", - "depends": ["geex", "GPArotation"] + "depends": ["GPArotation", "geex"] }, "REPLesentR": { "name": "REPLesentR", @@ -26045,7 +26309,7 @@ "name": "REPPlab", "version": "0.9.6", "sha256": "1hiv6fz2s7dwjixnlqckvpa4dns8wannpinjjpxs3fcskgxmkgrz", - "depends": ["lattice", "LDRTools", "rJava"] + "depends": ["LDRTools", "lattice", "rJava"] }, "REPPlabShiny": { "name": "REPPlabShiny", @@ -26099,7 +26363,7 @@ "name": "REddyProc", "version": "1.3.3", "sha256": "0ss8zyvvhkkw42vk3v4qx21i9navb74kjlgj3dikz0a19z93nrrz", - "depends": ["bigleaf", "dplyr", "magrittr", "mlegp", "purrr", "Rcpp", "readr", "rlang", "solartime", "tibble"] + "depends": ["Rcpp", "bigleaf", "dplyr", "magrittr", "mlegp", "purrr", "readr", "rlang", "solartime", "tibble"] }, "REddyProcNCDF": { "name": "REddyProcNCDF", @@ -26115,9 +26379,9 @@ }, "REndo": { "name": "REndo", - "version": "2.4.9", - "sha256": "08am92h1j2zx7pannnd6z9h4xr14awdp4rzv4sdmgf3x7sfjcp5g", - "depends": ["AER", "corpcor", "data_table", "Formula", "lme4", "lmtest", "Matrix", "mvtnorm", "optimx", "Rcpp", "RcppEigen"] + "version": "2.4.10", + "sha256": "08wxk8s4bwxbvk4d49dd3nb5nhngd0rvh8nfnncsm0agrly82k78", + "depends": ["AER", "Formula", "Matrix", "Rcpp", "RcppEigen", "corpcor", "data_table", "lme4", "lmtest", "mvtnorm", "optimx"] }, "RFCCA": { "name": "RFCCA", @@ -26135,7 +26399,7 @@ "name": "RFOC", "version": "3.4-10", "sha256": "0011irdbvflqz9r1l6c8d801y6jx0xmwhcv2a6xjwj0bjsw1s8di", - "depends": ["fields", "GEOmap", "MASS", "RPMG", "RSEIS"] + "depends": ["GEOmap", "MASS", "RPMG", "RSEIS", "fields"] }, "RFPM": { "name": "RFPM", @@ -26159,7 +26423,7 @@ "name": "RFlocalfdr", "version": "0.8.5", "sha256": "0vp2zblx5419jhs1l6wg18k3wdf4kaslmrys4xml8432pkqmnja0", - "depends": ["fitdistrplus", "minpack_lm", "randomForest", "ranger", "RFlocalfdr_data", "sn", "vita"] + "depends": ["RFlocalfdr_data", "fitdistrplus", "minpack_lm", "randomForest", "ranger", "sn", "vita"] }, "RFlocalfdr_data": { "name": "RFlocalfdr.data", @@ -26177,7 +26441,7 @@ "name": "RFpredInterval", "version": "1.0.8", "sha256": "08nr4a5nzwb4wdzi87jangv4yfl8dh3bhbwksipal3dhmmiwgzbf", - "depends": ["data_table", "data_tree", "DiagrammeR", "hdrcde", "ranger"] + "depends": ["DiagrammeR", "data_table", "data_tree", "hdrcde", "ranger"] }, "RGAN": { "name": "RGAN", @@ -26189,7 +26453,7 @@ "name": "RGAP", "version": "0.1.1", "sha256": "1gskz1zsr9v30f7w67a7d3fm66cnlafj329zq110ddgbp3agd2ll", - "depends": ["dlm", "ggplot2", "gridExtra", "KFAS", "openxlsx", "zoo"] + "depends": ["KFAS", "dlm", "ggplot2", "gridExtra", "openxlsx", "zoo"] }, "RGBM": { "name": "RGBM", @@ -26201,31 +26465,31 @@ "name": "RGCCA", "version": "3.0.3", "sha256": "00ap665i3vg4nnrs7wasyd05rgvk1mr1gcihrc50awdfkgwjghs8", - "depends": ["caret", "Deriv", "ggplot2", "ggrepel", "gridExtra", "MASS", "matrixStats", "pbapply", "rlang"] + "depends": ["Deriv", "MASS", "caret", "ggplot2", "ggrepel", "gridExtra", "matrixStats", "pbapply", "rlang"] }, "RGCxGC": { "name": "RGCxGC", "version": "1.2.0", "sha256": "1hz363pqlx0l3wi4di69fmrv4awl37lz8fzl4g070zchwzbffcpc", - "depends": ["colorRamps", "ptw", "Rdpack", "RNetCDF"] + "depends": ["RNetCDF", "Rdpack", "colorRamps", "ptw"] }, "RGE": { "name": "RGE", "version": "1.0", "sha256": "1ild1if10xicfapfcmydz1cgvn5fyydrik8qclb90i95bl9bs4ia", - "depends": ["coda", "Matrix", "MatrixModels"] + "depends": ["Matrix", "MatrixModels", "coda"] }, "RGENERATE": { "name": "RGENERATE", "version": "1.3.7", "sha256": "0w6hqrf2lr6qz79skml2vjpfwfv5vxj94rghxxa3rp9dqzhi7rc0", - "depends": ["magrittr", "RMAWGEN"] + "depends": ["RMAWGEN", "magrittr"] }, "RGENERATEPREC": { "name": "RGENERATEPREC", "version": "1.2.9", "sha256": "0bnw77vny61pkhp9pb3v3ckz6immm4pp9f7qzyhc97646fci9ysl", - "depends": ["blockmatrix", "copula", "Matrix", "RGENERATE", "RMAWGEN", "stringr"] + "depends": ["Matrix", "RGENERATE", "RMAWGEN", "blockmatrix", "copula", "stringr"] }, "RGF": { "name": "RGF", @@ -26243,7 +26507,7 @@ "name": "RGMM", "version": "2.1.0", "sha256": "1b0r1scxd40d93s96xa1cc9ls1f7vs2g5g8sjnm0kd562mwj4pxp", - "depends": ["DescTools", "doParallel", "foreach", "genieclust", "ggplot2", "LaplacesDemon", "mclust", "mvtnorm", "Rcpp", "RcppArmadillo", "reshape2", "RSpectra"] + "depends": ["DescTools", "LaplacesDemon", "RSpectra", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "genieclust", "ggplot2", "mclust", "mvtnorm", "reshape2"] }, "RGN": { "name": "RGN", @@ -26279,19 +26543,19 @@ "name": "RGoogleFit", "version": "0.4.0", "sha256": "0k1vvl4l6pq37llpbq996rbghdfld7mz7bhzbpw393fmrkd45vyi", - "depends": ["bit64", "httr", "jsonlite", "RCurl"] + "depends": ["RCurl", "bit64", "httr", "jsonlite"] }, "RGraphSpace": { "name": "RGraphSpace", - "version": "1.0.5", - "sha256": "1w1dflh35j44ypdy8nd6l9i9la49hjvwkrlk74mch5knafgb8xzw", + "version": "1.0.6", + "sha256": "1rdq9gnmc2znlpq60n3sn8zpir3wfa2k2ds63pcw1v4w921dmz55", "depends": ["ggplot2", "igraph", "scales"] }, "RGraphics": { "name": "RGraphics", "version": "3.0-2", "sha256": "02gp2lqc5qzid81d28cqb7x88zr0ivxppy55a9q649whcd027071", - "depends": ["ggplot2", "gridBase", "gridGraphics", "gridSVG", "grImport", "grImport2", "lattice"] + "depends": ["ggplot2", "grImport", "grImport2", "gridBase", "gridGraphics", "gridSVG", "lattice"] }, "RGreenplum": { "name": "RGreenplum", @@ -26309,19 +26573,19 @@ "name": "RH2", "version": "0.2.4", "sha256": "14590l3a2znd56nrq1zfbfv7fgii4672qy1xfwiynrh3mjad217k", - "depends": ["chron", "rJava", "RJDBC"] + "depends": ["RJDBC", "chron", "rJava"] }, "RHMS": { "name": "RHMS", "version": "1.7", "sha256": "1fld5y39a4xq40wh23944ngcrkqk2pw8w9raxir9wn2z2nysr7zg", - "depends": ["GGally", "ggplot2", "Hmisc", "network", "pso"] + "depends": ["GGally", "Hmisc", "ggplot2", "network", "pso"] }, "RHPCBenchmark": { "name": "RHPCBenchmark", "version": "0.1.0", "sha256": "1f94d8z15ybqgc2pccsi1m6563xf26ygri6f4pwxkqjmxkxnk34y", - "depends": ["cluster", "Matrix", "mvtnorm"] + "depends": ["Matrix", "cluster", "mvtnorm"] }, "RHRT": { "name": "RHRT", @@ -26363,7 +26627,7 @@ "name": "RI2by2", "version": "1.4", "sha256": "1kaphphc21jxizm3h6kfh0ky17pyq3ykh30v7b582d7km00hivg8", - "depends": ["gtools", "Rcpp"] + "depends": ["Rcpp", "gtools"] }, "RIA": { "name": "RIA", @@ -26381,7 +26645,7 @@ "name": "RISCA", "version": "1.0.5", "sha256": "1ysd3al4bai3nrzqxrs4bq9613h77d4wm54pchp6g89cgnrgzn3v", - "depends": ["caret", "cubature", "date", "doParallel", "foreach", "glmnet", "kernlab", "MASS", "mosaic", "mvtnorm", "nlme", "nnet", "relsurv", "reticulate", "rpart", "statmod", "SuperLearner", "survival", "tune"] + "depends": ["MASS", "SuperLearner", "caret", "cubature", "date", "doParallel", "foreach", "glmnet", "kernlab", "mosaic", "mvtnorm", "nlme", "nnet", "relsurv", "reticulate", "rpart", "statmod", "survival", "tune"] }, "RISmed": { "name": "RISmed", @@ -26393,13 +26657,13 @@ "name": "RITCH", "version": "0.1.26", "sha256": "0n8vd7jdw5hb4vx3nspg64m52j2n2pmjh649nr87444dkfnaf4wc", - "depends": ["bit64", "data_table", "nanotime", "Rcpp"] + "depends": ["Rcpp", "bit64", "data_table", "nanotime"] }, "RIbench": { "name": "RIbench", "version": "1.0.2", "sha256": "0dfxwcm3q8bgwprv0vn440w3186g04a4rm4i33pnpvg2c0qph0sp", - "depends": ["data_table", "digest", "optparse", "RColorBrewer"] + "depends": ["RColorBrewer", "data_table", "digest", "optparse"] }, "RIdeogram": { "name": "RIdeogram", @@ -26409,9 +26673,9 @@ }, "RImageJROI": { "name": "RImageJROI", - "version": "0.1.2", - "sha256": "1rsc8iv80zyjzpj80yyyhndxvskdbldsfc2gskrr1r8yh5gmhn23", - "depends": ["spatstat", "spatstat_geom"] + "version": "0.1.3", + "sha256": "058l1lgxjw70cn1dmmxd9ap7lrnj98kl495v3j6zn91afwshic4w", + "depends": ["spatstat_geom"] }, "RImagePalette": { "name": "RImagePalette", @@ -26441,7 +26705,7 @@ "name": "RItools", "version": "0.3-4", "sha256": "1msjxrlil82sa8xm705zi5kqy74nq8jndgm7aq0skn9ms6w88xh4", - "depends": ["abind", "dplyr", "ggplot2", "SparseM", "survival", "svd", "tibble", "tidyr", "xtable"] + "depends": ["SparseM", "abind", "dplyr", "ggplot2", "survival", "svd", "tibble", "tidyr", "xtable"] }, "RJDBC": { "name": "RJDBC", @@ -26477,19 +26741,19 @@ "name": "RJafroc", "version": "2.1.2", "sha256": "1immjb2313ss7pc61m3y59h6m3i0257lhvrkkvhrprl9jsyanfca", - "depends": ["bbmle", "binom", "dplyr", "ggplot2", "mvtnorm", "numDeriv", "openxlsx", "Rcpp", "readxl", "stringr"] + "depends": ["Rcpp", "bbmle", "binom", "dplyr", "ggplot2", "mvtnorm", "numDeriv", "openxlsx", "readxl", "stringr"] }, "RJcluster": { "name": "RJcluster", "version": "3.2.4", "sha256": "157dmi5gksq7s16ip4n9j5bj9s9bawl078rh13s1xxyr6f51yp09", - "depends": ["foreach", "infotheo", "matrixStats", "mclust", "profvis", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "foreach", "infotheo", "matrixStats", "mclust", "profvis", "rlang"] }, "RKEA": { "name": "RKEA", "version": "0.0-6", "sha256": "1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp", - "depends": ["rJava", "RKEAjars", "tm"] + "depends": ["RKEAjars", "rJava", "tm"] }, "RKEAjars": { "name": "RKEAjars", @@ -26501,7 +26765,7 @@ "name": "RKEEL", "version": "1.3.4", "sha256": "05fwzpa4dixc7lp89x122w07gzblxyyaf5l74gds0zgib9ik5cab", - "depends": ["arules", "doParallel", "downloader", "foreach", "gdata", "Matrix", "openssl", "pmml", "R6", "rJava", "RKEELdata", "XML"] + "depends": ["Matrix", "R6", "RKEELdata", "XML", "arules", "doParallel", "downloader", "foreach", "gdata", "openssl", "pmml", "rJava"] }, "RKEELdata": { "name": "RKEELdata", @@ -26531,13 +26795,13 @@ "name": "RKorAPClient", "version": "0.8.1", "sha256": "1p3i2h5lw288vgqj6z5xiv0y0f73pwzvi7wlmbvf6i7adr3qcdg6", - "depends": ["broom", "curl", "dplyr", "ggplot2", "highcharter", "httr", "jsonlite", "keyring", "lubridate", "magrittr", "PTXQC", "purrr", "R_cache", "stringr", "tibble", "tidyr", "urltools"] + "depends": ["PTXQC", "R_cache", "broom", "curl", "dplyr", "ggplot2", "highcharter", "httr", "jsonlite", "keyring", "lubridate", "magrittr", "purrr", "stringr", "tibble", "tidyr", "urltools"] }, "RLRsim": { "name": "RLRsim", "version": "3.1-8", "sha256": "06i4slc7fj8xifq20i1vqfadfw2p81b0kfzga60139hnryz1zpva", - "depends": ["lme4", "mgcv", "nlme", "Rcpp"] + "depends": ["Rcpp", "lme4", "mgcv", "nlme"] }, "RLT": { "name": "RLT", @@ -26561,19 +26825,19 @@ "name": "RLumCarlo", "version": "0.1.9", "sha256": "1a57nrhnq2q68yi0djh40kk1ms075kpwnmiq33vvy5pl57axnqpr", - "depends": ["abind", "doParallel", "foreach", "khroma", "magrittr", "Rcpp", "RcppArmadillo", "scatterplot3d"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "doParallel", "foreach", "khroma", "magrittr", "scatterplot3d"] }, "RLumModel": { "name": "RLumModel", "version": "0.2.10", "sha256": "1klb7zvxksij517bi8xi68bia6y7jlp3ils659mmwdm2w0ljmwa6", - "depends": ["deSolve", "khroma", "Luminescence", "Rcpp", "RcppArmadillo"] + "depends": ["Luminescence", "Rcpp", "RcppArmadillo", "deSolve", "khroma"] }, "RLumShiny": { "name": "RLumShiny", "version": "0.2.3", "sha256": "12dc30q41b1vha52mn9rr1m86ykp3yfsyxcxxwklavd60g76b8vd", - "depends": ["data_table", "DT", "googleVis", "knitr", "Luminescence", "markdown", "RCarb", "readxl", "rhandsontable", "shiny", "shinydashboard"] + "depends": ["DT", "Luminescence", "RCarb", "data_table", "googleVis", "knitr", "markdown", "readxl", "rhandsontable", "shiny", "shinydashboard"] }, "RM_weights": { "name": "RM.weights", @@ -26603,12 +26867,12 @@ "name": "RMBC", "version": "0.1.0", "sha256": "1fqbr28d09j01rmr9gylzkpvrd6bc9rnjbyzv06hmlx5mmjmzkb4", - "depends": ["ktaucenters", "MASS", "mvtnorm"] + "depends": ["MASS", "ktaucenters", "mvtnorm"] }, "RMCC": { "name": "RMCC", - "version": "0.1.0", - "sha256": "12ksv4yms1pgk7yj40yjmbc5rz1ai1mn8xd3a4w2pdx0mwjin6sz", + "version": "0.1.1", + "sha256": "0nzbjnayp85541pnibal517dhc0s7mhlllshx36m44lv2x3figpl", "depends": ["BH", "Rcpp"] }, "RMKdiscrete": { @@ -26621,19 +26885,19 @@ "name": "RMLPCA", "version": "0.0.1", "sha256": "1xzh6fwl71dzdpbqgpkqnmdzdk8rblg6n1ddic5yxxfvzg3bh13x", - "depends": ["Matrix", "pracma", "RSpectra"] + "depends": ["Matrix", "RSpectra", "pracma"] }, "RMM": { "name": "RMM", "version": "0.1.0", "sha256": "01qkcsybjgwx6gkww3hjmd4gqv20zkxbnwygn6wnim3clxrxphil", - "depends": ["dplyr", "magrittr", "numDeriv", "Rcpp", "rlang", "tibble"] + "depends": ["Rcpp", "dplyr", "magrittr", "numDeriv", "rlang", "tibble"] }, "RMOA": { "name": "RMOA", "version": "1.1.0", "sha256": "1yiv8xd9a8vgqgrnf68kkcr2hnr0q16pisi50pplr6z4mn07w8ba", - "depends": ["rJava", "RMOAjars"] + "depends": ["RMOAjars", "rJava"] }, "RMOAjars": { "name": "RMOAjars", @@ -26645,7 +26909,7 @@ "name": "RMOPI", "version": "1.1", "sha256": "0jjli73b1xinrkq0fndfaan1mgf6yb29skqvva4lib0zgd8p1v21", - "depends": ["fPortfolio", "ggplot2", "lubridate", "MASS", "PerformanceAnalytics", "rugarch", "tibble", "timeDate", "timeSeries", "TTR", "xts"] + "depends": ["MASS", "PerformanceAnalytics", "TTR", "fPortfolio", "ggplot2", "lubridate", "rugarch", "tibble", "timeDate", "timeSeries", "xts"] }, "RMPSH": { "name": "RMPSH", @@ -26675,19 +26939,19 @@ "name": "RMSS", "version": "1.1.1", "sha256": "18hm626yr3xrsi9spzr42y9pf547xdx7byqq15bvh9f04qaalck3", - "depends": ["cellWise", "Rcpp", "RcppArmadillo", "robStepSplitReg", "robustbase", "srlars"] + "depends": ["Rcpp", "RcppArmadillo", "cellWise", "robStepSplitReg", "robustbase", "srlars"] }, "RMT4DS": { "name": "RMT4DS", "version": "0.0.1", "sha256": "05fwhd36lvi21gr5nz8mgxk5qzw4vxkrgw499p11aa9qhcn8xq4g", - "depends": ["lpSolve", "MASS", "mpoly", "nleqslv", "pracma", "quadprog", "rARPACK", "RMTstat", "rootSolve"] + "depends": ["MASS", "RMTstat", "lpSolve", "mpoly", "nleqslv", "pracma", "quadprog", "rARPACK", "rootSolve"] }, "RMTL": { "name": "RMTL", "version": "0.9.9", "sha256": "1wyv9l1xgdm4s8ibjw3kwfsr77hxkxj80cgvkfv4mdir0bxm84b4", - "depends": ["corpcor", "doParallel", "foreach", "MASS", "psych"] + "depends": ["MASS", "corpcor", "doParallel", "foreach", "psych"] }, "RMThreshold": { "name": "RMThreshold", @@ -26709,9 +26973,9 @@ }, "RMaCzek": { "name": "RMaCzek", - "version": "1.5.1", - "sha256": "1zbpwhfa9mb55yglf4kgvch3hg7pvsfga4kpq45lz1cbs9454mzw", - "depends": ["e1071", "ecp", "GA", "RColorBrewer", "seriation"] + "version": "1.6.0", + "sha256": "17vnan5c4yxzbx95x4mk9j7ff0nz26rzdpxydv7dnsqygpcf58a5", + "depends": ["FuzzyDBScan", "GA", "RColorBrewer", "e1071", "ecp", "seriation"] }, "RMallow": { "name": "RMallow", @@ -26723,7 +26987,7 @@ "name": "RMariaDB", "version": "1.3.2", "sha256": "0a38hbc9nc25x9a8z91wc24h4llmyhjim6vavmwrx2r14c3fz1vw", - "depends": ["bit64", "blob", "cpp11", "DBI", "hms", "lubridate", "plogr", "rlang"] + "depends": ["DBI", "bit64", "blob", "cpp11", "hms", "lubridate", "plogr", "rlang"] }, "RMark": { "name": "RMark", @@ -26735,25 +26999,25 @@ "name": "RMediation", "version": "1.2.2", "sha256": "16zw8ic8h2q1qg627ddaxmr9dvj7ckdljbzfgwq557nxc2fgk1v2", - "depends": ["doParallel", "e1071", "foreach", "iterators", "lavaan", "MASS", "modelr", "OpenMx", "stringr"] + "depends": ["MASS", "OpenMx", "doParallel", "e1071", "foreach", "iterators", "lavaan", "modelr", "stringr"] }, "RMixpanel": { "name": "RMixpanel", "version": "0.7-1", "sha256": "1xwmmfvky49n1l0w3kwcyaf2h4rhzz4k5icjwvpc90fqk8sxib6a", - "depends": ["base64enc", "jsonlite", "RCurl", "uuid"] + "depends": ["RCurl", "base64enc", "jsonlite", "uuid"] }, "RMixtComp": { "name": "RMixtComp", "version": "4.1.4", "sha256": "1jybw5yhcahvixpyb551mzifi6kw914g80g1g4pdbgpkg4f9sfk4", - "depends": ["ggplot2", "plotly", "RMixtCompIO", "RMixtCompUtilities", "scales"] + "depends": ["RMixtCompIO", "RMixtCompUtilities", "ggplot2", "plotly", "scales"] }, "RMixtCompIO": { "name": "RMixtCompIO", "version": "4.0.11", "sha256": "1y2m5fb8a2xc0ydrjl2l1a6vfabndvrighwz5yi288wqgih70gqz", - "depends": ["BH", "doParallel", "foreach", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "doParallel", "foreach"] }, "RMixtCompUtilities": { "name": "RMixtCompUtilities", @@ -26769,21 +27033,21 @@ }, "RNAmf": { "name": "RNAmf", - "version": "0.1.2", - "sha256": "0hshkb5dhfpvgwpcp7a1rlp27a78lp48v7zsciw1lmga2igq5x42", + "version": "1.0.0", + "sha256": "13c00l660f6yl5hhbv99h95q0nvzrfv0svm40bzfaz88q54pv9q1", "depends": ["doParallel", "foreach", "lhs", "plgp"] }, "RNAseqNet": { "name": "RNAseqNet", "version": "0.1.5", "sha256": "09jqgj1wwwxhk6xkfhkwzkbj0byk3441wa4kj4nzgwzv0qw6inds", - "depends": ["ggplot2", "glmnet", "hot_deck", "igraph", "PoiClaClu"] + "depends": ["PoiClaClu", "ggplot2", "glmnet", "hot_deck", "igraph"] }, "RNAseqQC": { "name": "RNAseqQC", - "version": "0.1.4", - "sha256": "0f9k3ba2w75sjywngmvp7g10837wx65v112inpag3rplk9ljahvp", - "depends": ["AnnotationFilter", "AnnotationHub", "circlize", "ComplexHeatmap", "cowplot", "DESeq2", "dplyr", "ensembldb", "gghighlight", "ggplot2", "ggpointdensity", "ggrepel", "ggsci", "magrittr", "matrixStats", "patchwork", "purrr", "RColorBrewer", "stringr", "SummarizedExperiment", "tibble", "tidyr", "tidyselect", "vsn"] + "version": "0.2.1", + "sha256": "1041whycnph2bdmphy9k27b39g541lxa210jbnfxc5r9617rcavh", + "depends": ["AnnotationFilter", "AnnotationHub", "BiocGenerics", "ComplexHeatmap", "DESeq2", "SummarizedExperiment", "circlize", "cowplot", "dplyr", "ensembldb", "ggplot2", "ggpointdensity", "ggrepel", "magrittr", "matrixStats", "patchwork", "purrr", "stringr", "tibble", "tidyr", "tidyselect"] }, "RNCBIEUtilsLibs": { "name": "RNCBIEUtilsLibs", @@ -26795,7 +27059,7 @@ "name": "RNCEP", "version": "1.0.10", "sha256": "19ja7pcp7ajwhqhqw92pdmvxzyjc4kw3943pllpx47s1zvi6dmci", - "depends": ["abind", "fields", "maps", "RColorBrewer", "sp", "tgp"] + "depends": ["RColorBrewer", "abind", "fields", "maps", "sp", "tgp"] }, "RND": { "name": "RND", @@ -26807,7 +27071,7 @@ "name": "RNGforGPD", "version": "1.1.0", "sha256": "0zriv0pd86ciwrms95bbb9wh40xvxv20vla2hxbmaynfy1s1vd4j", - "depends": ["corpcor", "Matrix", "mvtnorm"] + "depends": ["Matrix", "corpcor", "mvtnorm"] }, "RNHANES": { "name": "RNHANES", @@ -26819,13 +27083,13 @@ "name": "RNOmni", "version": "1.0.1.2", "sha256": "1ap6rf59sr9v28s1a484bfz1c7jizrivlf1r4xvnp8dvb1hj1k9n", - "depends": ["plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "plyr"] }, "RNeXML": { "name": "RNeXML", "version": "2.4.11", "sha256": "0ipxdhfzccpqmnfrqdy8bizm80k2chhdlzg3p0dl05p8n35i6s94", - "depends": ["ape", "dplyr", "httr", "plyr", "reshape2", "rlang", "stringi", "stringr", "tidyr", "uuid", "XML", "xml2"] + "depends": ["XML", "ape", "dplyr", "httr", "plyr", "reshape2", "rlang", "stringi", "stringr", "tidyr", "uuid", "xml2"] }, "RNentropy": { "name": "RNentropy", @@ -26849,25 +27113,25 @@ "name": "RNewsflow", "version": "1.2.8", "sha256": "08qb0vh2j1v13wqsrmklh6d4ln7ipsy962cwnlr86j0r2bscrqgy", - "depends": ["data_table", "igraph", "Matrix", "quanteda", "Rcpp", "RcppEigen", "RcppProgress", "scales", "stringi", "wordcloud"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "RcppProgress", "data_table", "igraph", "quanteda", "scales", "stringi", "wordcloud"] }, "RNifti": { "name": "RNifti", - "version": "1.6.1", - "sha256": "0wn06fnq5c7f0vwakryb75vzkjh03dqz2z57lgmn68hwgssnpalc", + "version": "1.7.0", + "sha256": "1s0q1vs6hzg1xadk43rxqxi55swkl7pgsnw45im5vgsz1wxgg375", "depends": ["Rcpp"] }, "RNiftyReg": { "name": "RNiftyReg", - "version": "2.8.2", - "sha256": "0jrb1j8hl25lby2ikpvmmrxq39plx3r6qmrn0bnzbmyvbb5x1vfq", - "depends": ["ore", "Rcpp", "RcppEigen", "RNifti"] + "version": "2.8.3", + "sha256": "0vbzjybn0431r7brh53azzw5n6nii5j4mcd9j8s7ifps6apd3s3f", + "depends": ["RNifti", "Rcpp", "RcppEigen", "ore"] }, "ROAuth": { "name": "ROAuth", "version": "0.9.6", "sha256": "0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m", - "depends": ["digest", "RCurl"] + "depends": ["RCurl", "digest"] }, "ROCFTP_MMS": { "name": "ROCFTP.MMS", @@ -26885,7 +27149,7 @@ "name": "ROCSI", "version": "0.1.0", "sha256": "0bj1f62j2b39whm0grl1xvzkwi3jlrzpgzm77vskgyhaqrk17j9z", - "depends": ["glmnet", "MASS"] + "depends": ["MASS", "glmnet"] }, "ROCaggregator": { "name": "ROCaggregator", @@ -26909,7 +27173,7 @@ "name": "ROCnReg", "version": "1.0-9", "sha256": "149iq8i67qmdy6a65b4zw03f1sha8dbnirqw24in1kar3m5zg9hn", - "depends": ["lattice", "MASS", "Matrix", "moments", "nor1mix", "np", "pbivnorm", "spatstat_univar"] + "depends": ["MASS", "Matrix", "lattice", "moments", "nor1mix", "np", "pbivnorm", "spatstat_univar"] }, "ROCpsych": { "name": "ROCpsych", @@ -26917,6 +27181,12 @@ "sha256": "0fcrhhxmvrrchbswb94liahbgz5pfhs86fbj0vby7vnakrhngh7v", "depends": ["pROC", "reportROC"] }, + "ROCsurf": { + "name": "ROCsurf", + "version": "0.1.1", + "sha256": "0xp1v95kfwkizm194hrcypc0lvaq111v7c3lqai6vkbz444al4dp", + "depends": ["plotly", "pracma"] + }, "RODBC": { "name": "RODBC", "version": "1.3-23", @@ -26939,13 +27209,13 @@ "name": "ROI.models.globalOptTests", "version": "1.1-1", "sha256": "1zj636cmjhhqbn6hh6760bi5y8lf6y7qqkz72yijq7dj2y1za2ph", - "depends": ["globalOptTests", "ROI"] + "depends": ["ROI", "globalOptTests"] }, "ROI_models_miplib": { "name": "ROI.models.miplib", "version": "1.0-0", "sha256": "12yxra45s9f14dn12wibxrz598g3s39lm3af4dxmw9jnlfb8z84b", - "depends": ["R_utils", "Rglpk", "ROI"] + "depends": ["ROI", "R_utils", "Rglpk"] }, "ROI_models_netlib": { "name": "ROI.models.netlib", @@ -26957,19 +27227,19 @@ "name": "ROI.plugin.alabama", "version": "1.0-2", "sha256": "0if6994xcc0w9dy3ph8g9lhnx0lpndgf0yzcgn558i00d21csqz7", - "depends": ["alabama", "ROI"] + "depends": ["ROI", "alabama"] }, "ROI_plugin_clarabel": { "name": "ROI.plugin.clarabel", "version": "0.3", "sha256": "0icaqbgh435drd00104rpy0xwvkdadh697nfp22kjnlz9mcwzfp1", - "depends": ["clarabel", "ROI", "slam"] + "depends": ["ROI", "clarabel", "slam"] }, "ROI_plugin_cplex": { "name": "ROI.plugin.cplex", "version": "0.3-0", "sha256": "1ipwvclrxws7nvirvns58gpakg23ldiphyl6g0akxk5hczr0lazf", - "depends": ["Rcplex", "ROI", "slam"] + "depends": ["ROI", "Rcplex", "slam"] }, "ROI_plugin_deoptim": { "name": "ROI.plugin.deoptim", @@ -26987,25 +27257,25 @@ "name": "ROI.plugin.glpk", "version": "1.0-0", "sha256": "0i5l0k5mk2xp2gdvpmlgxjycvzmgc83rkind68ab4x1d4bab0qdk", - "depends": ["Rglpk", "ROI"] + "depends": ["ROI", "Rglpk"] }, "ROI_plugin_highs": { "name": "ROI.plugin.highs", "version": "1.0-3", "sha256": "0ldfm4y66wj4marwzvm6f7dgq31q3bdr2cwqw4hlc0nc379anmrv", - "depends": ["highs", "ROI"] + "depends": ["ROI", "highs"] }, "ROI_plugin_ipop": { "name": "ROI.plugin.ipop", "version": "1.0-0", "sha256": "00xjariraga2j4zk6vyzwl5g4a65ki1jmky556hizma78ksjrikv", - "depends": ["kernlab", "ROI", "slam"] + "depends": ["ROI", "kernlab", "slam"] }, "ROI_plugin_lpsolve": { "name": "ROI.plugin.lpsolve", "version": "1.0-2", "sha256": "0xgg1fzq5sba3yvvrci3iw97p31walpnhv4zwnd39gw8v5z6f9dj", - "depends": ["lpSolveAPI", "ROI"] + "depends": ["ROI", "lpSolveAPI"] }, "ROI_plugin_msbinlp": { "name": "ROI.plugin.msbinlp", @@ -27023,31 +27293,31 @@ "name": "ROI.plugin.nloptr", "version": "1.0-1", "sha256": "05517zgk5p548criz6211hqc11r745bbj4fxjvkbcrh03ijhxyhx", - "depends": ["nloptr", "ROI"] + "depends": ["ROI", "nloptr"] }, "ROI_plugin_optimx": { "name": "ROI.plugin.optimx", "version": "1.0-1", "sha256": "1d2kwzgs9pf56fm90n0wxldgm3n7ybk31avklcspa40bki9lr6af", - "depends": ["optimx", "ROI"] + "depends": ["ROI", "optimx"] }, "ROI_plugin_osqp": { "name": "ROI.plugin.osqp", - "version": "1.0-1", - "sha256": "1b62jwj946mxlq7n2ilk2v7bknkjhifxy15yaqvbfxvkyk0r8jfi", - "depends": ["Matrix", "osqp", "ROI", "slam"] + "version": "1.0-2", + "sha256": "0jz8yzq6p50s3ggm1dkmfw1a14l5yz5ag2fdknf62xljhzwgv62a", + "depends": ["Matrix", "ROI", "osqp", "slam"] }, "ROI_plugin_qpoases": { "name": "ROI.plugin.qpoases", "version": "1.0-3", "sha256": "1hbb71y4pcp6ia1qc0gg87ynxv82awjpsfl2pc6qlrlb9plx355c", - "depends": ["checkmate", "Rcpp", "ROI", "slam"] + "depends": ["ROI", "Rcpp", "checkmate", "slam"] }, "ROI_plugin_quadprog": { "name": "ROI.plugin.quadprog", "version": "1.0-1", "sha256": "11r0f5lx9jkiqaj48lzvz21rrh2imka04pl8rf7nif0w8n57g4g8", - "depends": ["quadprog", "ROI", "slam"] + "depends": ["ROI", "quadprog", "slam"] }, "ROI_plugin_scs": { "name": "ROI.plugin.scs", @@ -27065,13 +27335,13 @@ "name": "ROMDB", "version": "0.1.0", "sha256": "14jijcqd2zmps8sacx5nwfclj5yvqf4nx72y8pfvr0nswqqb895i", - "depends": ["dplyr", "httr", "magick", "purrr", "RODBC", "stringr"] + "depends": ["RODBC", "dplyr", "httr", "magick", "purrr", "stringr"] }, "ROOPSD": { "name": "ROOPSD", "version": "0.3.9", "sha256": "0xc7fgg376wld4g61k7pfi1fwkxzzl69njn6p4v8ia4mnvp1p892", - "depends": ["Lmoments", "numDeriv", "R6"] + "depends": ["Lmoments", "R6", "numDeriv"] }, "ROSE": { "name": "ROSE", @@ -27087,15 +27357,15 @@ }, "ROpenCVLite": { "name": "ROpenCVLite", - "version": "4.90.1", - "sha256": "0kmz4vfpwpjhbx12qvpwz9vhz3ab61kf6sz4mmpzcr54r5v8l71r", - "depends": ["pkgbuild"] + "version": "4.90.2", + "sha256": "0iiyajrc9njx41f1mm4jhdj2a8ljzasn8lmbnrpv2bvppclsqc8q", + "depends": [] }, "ROpenDota": { "name": "ROpenDota", "version": "0.1.2", "sha256": "17s73yj2w5hlpy09ad83m4s2d9shg5h4zg64wvbp1ivyvpp7l308", - "depends": ["jsonlite", "RCurl"] + "depends": ["RCurl", "jsonlite"] }, "ROpenFIGI": { "name": "ROpenFIGI", @@ -27107,13 +27377,13 @@ "name": "ROpenWeatherMap", "version": "1.1", "sha256": "0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9", - "depends": ["httr", "jsonlite", "RCurl"] + "depends": ["RCurl", "httr", "jsonlite"] }, "ROptEst": { "name": "ROptEst", "version": "1.3.3", "sha256": "0mid70i7mjic6s5vswbggpln9iv78sm9h8lrqqg2a0g379n9brbp", - "depends": ["distr", "distrEx", "distrMod", "MASS", "RandVar", "RobAStBase", "startupmsg"] + "depends": ["MASS", "RandVar", "RobAStBase", "distr", "distrEx", "distrMod", "startupmsg"] }, "ROptSpace": { "name": "ROptSpace", @@ -27137,7 +27407,7 @@ "name": "RPANDA", "version": "2.3", "sha256": "12cah5vw9jcpnprnfhqwdh11fkn68djzgvdv2hr23yppa8nfn9zc", - "depends": ["ape", "BB", "bipartite", "cluster", "coda", "deSolve", "fields", "fpc", "geiger", "glassoFast", "GUniFrac", "igraph", "Matrix", "mvMORPH", "mvtnorm", "ParallelLogger", "phangorn", "phytools", "picante", "pracma", "pspline", "pvclust", "R_utils", "raster", "RColorBrewer", "Rmpfr", "TESS", "vegan"] + "depends": ["BB", "GUniFrac", "Matrix", "ParallelLogger", "RColorBrewer", "R_utils", "Rmpfr", "TESS", "ape", "bipartite", "cluster", "coda", "deSolve", "fields", "fpc", "geiger", "glassoFast", "igraph", "mvMORPH", "mvtnorm", "phangorn", "phytools", "picante", "pracma", "pspline", "pvclust", "raster", "vegan"] }, "RPDTest": { "name": "RPDTest", @@ -27149,7 +27419,7 @@ "name": "RPEGLMEN", "version": "1.1.2", "sha256": "0rbwxdh252vfx6qnplqqgmawpfk3naksi4wx11g1h7aj68cv8xjw", - "depends": ["Rcpp", "RcppEigen", "RPEIF"] + "depends": ["RPEIF", "Rcpp", "RcppEigen"] }, "RPEIF": { "name": "RPEIF", @@ -27161,7 +27431,7 @@ "name": "RPESE", "version": "1.2.5", "sha256": "157xvfa6m4vii92fac8xbhnah7np3jvd1y1y7ryw5c80yfbdhf0y", - "depends": ["boot", "RobStatTM", "RPEGLMEN", "RPEIF", "xts", "zoo"] + "depends": ["RPEGLMEN", "RPEIF", "RobStatTM", "boot", "xts", "zoo"] }, "RPEXE_RPEXT": { "name": "RPEXE.RPEXT", @@ -27173,7 +27443,7 @@ "name": "RPEnsemble", "version": "0.5", "sha256": "013dka8f8x9z84j3956l4h6c3afqs0ml14pzpzlsgh5ikby3jhbx", - "depends": ["class", "MASS"] + "depends": ["MASS", "class"] }, "RPMG": { "name": "RPMG", @@ -27191,7 +27461,7 @@ "name": "RPPASPACE", "version": "1.0.10", "sha256": "0k9z02qpzxqqcdq5kqrrlc9k9bqcrl69ik6l30fa0rd7ywaqwsbc", - "depends": ["bmp", "cobs", "doParallel", "foreach", "imager", "iterators", "jpeg", "mgcv", "nlme", "png", "quantreg", "robustbase", "SparseM", "tiff", "timeDate"] + "depends": ["SparseM", "bmp", "cobs", "doParallel", "foreach", "imager", "iterators", "jpeg", "mgcv", "nlme", "png", "quantreg", "robustbase", "tiff", "timeDate"] }, "RPPairwiseDesign": { "name": "RPPairwiseDesign", @@ -27203,13 +27473,19 @@ "name": "RPPanalyzer", "version": "1.4.9", "sha256": "1lw28cfi397klxxhs97dwzsfk7ykggbh4p82yg73sq6yq3liha1a", - "depends": ["Biobase", "gam", "ggplot2", "gplots", "Hmisc", "lattice", "limma", "quantreg"] + "depends": ["Biobase", "Hmisc", "gam", "ggplot2", "gplots", "lattice", "limma", "quantreg"] }, "RPhosFate": { "name": "RPhosFate", "version": "1.0.4", "sha256": "1gmnnvihxg6j83w4qgrrx61fz4p9r145qxs2qcscrs1q8bzlvw9k", - "depends": ["checkmate", "raster", "Rcpp", "RcppArmadillo", "spatstat_geom", "yaml"] + "depends": ["Rcpp", "RcppArmadillo", "checkmate", "raster", "spatstat_geom", "yaml"] + }, + "RPointCloud": { + "name": "RPointCloud", + "version": "0.6.2", + "sha256": "1n2rlw7zpmwsk95glgfa1wcr1k4hpyknd6xcc4996305k0s0lim2", + "depends": ["ClassDiscovery", "Mercator", "TDA", "circlize", "rgl"] }, "RPostgreSQL": { "name": "RPostgreSQL", @@ -27221,7 +27497,7 @@ "name": "RPostgres", "version": "1.4.7", "sha256": "0939ysl9m35aknnh3xk92xxymk1g0xqnjb2khq55m8nq7gcg3l9x", - "depends": ["bit64", "blob", "cpp11", "DBI", "hms", "lubridate", "plogr", "withr"] + "depends": ["DBI", "bit64", "blob", "cpp11", "hms", "lubridate", "plogr", "withr"] }, "RPregression": { "name": "RPregression", @@ -27233,7 +27509,7 @@ "name": "RPresto", "version": "1.4.6", "sha256": "1q8c3h328iwscnayxj8qc71s2hkqdqwnpf38kn3zz3ks66qzjf8c", - "depends": ["bit64", "DBI", "dbplyr", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "openssl", "progress", "purrr", "rlang", "stringi", "tibble", "vctrs"] + "depends": ["DBI", "bit64", "dbplyr", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "openssl", "progress", "purrr", "rlang", "stringi", "tibble", "vctrs"] }, "RProbSup": { "name": "RProbSup", @@ -27257,7 +27533,7 @@ "name": "RPtests", "version": "0.1.5", "sha256": "04j4nqy2qxn1pa8ar0j0wgzkpd624983wwhd73l1ax7fnskx0yhh", - "depends": ["glmnet", "randomForest", "Rcpp"] + "depends": ["Rcpp", "glmnet", "randomForest"] }, "RPublica": { "name": "RPublica", @@ -27287,12 +27563,12 @@ "name": "RQdeltaCT", "version": "1.3.0", "sha256": "1zwajwyiwhl12v1119w9xlyw07a9iigj3yy27nm65ninqjbfrn8j", - "depends": ["coin", "corrplot", "ctrlGene", "dplyr", "GGally", "ggplot2", "ggpmisc", "ggsignif", "Hmisc", "magrittr", "oddsratio", "pheatmap", "pROC", "tidyr", "tidyselect", "tidyverse"] + "depends": ["GGally", "Hmisc", "coin", "corrplot", "ctrlGene", "dplyr", "ggplot2", "ggpmisc", "ggsignif", "magrittr", "oddsratio", "pROC", "pheatmap", "tidyr", "tidyselect", "tidyverse"] }, "RQuantLib": { "name": "RQuantLib", - "version": "0.4.22", - "sha256": "0zs8ldaf1h8hr6czlvj457rr0w4z0rjgj290r3krg4a9ilb1iink", + "version": "0.4.24", + "sha256": "1wcc93vmkzycq19cc6byp66svwcv4za27izzywszqyd9a93a99rg", "depends": ["Rcpp", "zoo"] }, "RRBoost": { @@ -27321,15 +27597,15 @@ }, "RRNA": { "name": "RRNA", - "version": "1.1", - "sha256": "0bgsakpz1wr3wr6c5xa7wx2xmzs3xzkscrgwn6dc7f93kpq1j17p", + "version": "1.2", + "sha256": "05ijsnxxylfan4c4hnl20655qjzix2l43i5qmdzm19wqcf4ipylp", "depends": [] }, "RRPP": { "name": "RRPP", - "version": "2.0.2", - "sha256": "10hd5mp4a39gh6d13lw8xnn4qvziacywls33dngvjxaq9ccxc05p", - "depends": ["ape", "ggplot2", "Matrix"] + "version": "2.0.3", + "sha256": "1dd2v1zsi1hgb73a4fjd54k2mg43sb26h9l45nq9phsn8rnrfw7z", + "depends": ["Matrix", "ape", "ggplot2"] }, "RRRR": { "name": "RRRR", @@ -27371,7 +27647,7 @@ "name": "RSA", "version": "0.10.6", "sha256": "137izjrvicf02bnc6q00wn187754f25dh22swpb46vid18cf1q9h", - "depends": ["aplpack", "ggplot2", "lattice", "lavaan", "plyr", "RColorBrewer"] + "depends": ["RColorBrewer", "aplpack", "ggplot2", "lattice", "lavaan", "plyr"] }, "RSADBE": { "name": "RSADBE", @@ -27385,6 +27661,12 @@ "sha256": "0mdirx7d3z4l0k54wa6rb1c5gma470ypifd3flj2287m8y2wjqq5", "depends": ["gstat", "magrittr", "plyr", "shapefiles", "stringr"] }, + "RSAtools": { + "name": "RSAtools", + "version": "0.1.1", + "sha256": "0bri0hnq689vlxhi4vjya0hy529ksild62dlz40wybzywpaqa46g", + "depends": ["RColorBrewer", "RSA", "aplpack", "ggplot2", "lattice", "lavaan", "plyr", "semTools"] + }, "RSBJson": { "name": "RSBJson", "version": "1.1.2", @@ -27395,19 +27677,19 @@ "name": "RSC", "version": "2.0.4", "sha256": "106pvrg10f8w0aqbnahqjdii49ijp2659l7kkj5y46pbr90lbpzs", - "depends": ["doParallel", "foreach", "Matrix"] + "depends": ["Matrix", "doParallel", "foreach"] }, "RSCAT": { "name": "RSCAT", "version": "1.1.3", "sha256": "08p4gywh1g13mwcmvp046ybz410jyrzi505rdqr8yirjpk59bw1p", - "depends": ["ggplot2", "gridExtra", "Metrics", "rJava", "shiny", "shinycssloaders", "shinyjs"] + "depends": ["Metrics", "ggplot2", "gridExtra", "rJava", "shiny", "shinycssloaders", "shinyjs"] }, "RSDA": { "name": "RSDA", "version": "3.2.1", "sha256": "10dx9ds7i738wydljkfw5jvggixsysbg2674hrw4z4lccgijjmrc", - "depends": ["dplyr", "e1071", "FactoMineR", "forcats", "gbm", "ggplot2", "ggpolypath", "ggrepel", "glmnet", "kknn", "magrittr", "neuralnet", "nloptr", "plotly", "princurve", "purrr", "randomcoloR", "randomForest", "reshape", "RJSONIO", "rlang", "rpart", "scales", "sqldf", "stringr", "tibble", "tidyselect", "umap", "vctrs", "XML", "xtable"] + "depends": ["FactoMineR", "RJSONIO", "XML", "dplyr", "e1071", "forcats", "gbm", "ggplot2", "ggpolypath", "ggrepel", "glmnet", "kknn", "magrittr", "neuralnet", "nloptr", "plotly", "princurve", "purrr", "randomForest", "randomcoloR", "reshape", "rlang", "rpart", "scales", "sqldf", "stringr", "tibble", "tidyselect", "umap", "vctrs", "xtable"] }, "RSDK": { "name": "RSDK", @@ -27449,25 +27731,25 @@ "name": "RSP", "version": "0.4", "sha256": "126lag0i2k4fwlr7gnc9jfn63pyi6d6gzzmypyr6jk666pwsk5f6", - "depends": ["catR", "DT", "foreign", "ggplot2", "GPArotation", "gt", "hornpa", "igraph", "lavaan", "ltm", "Metrics", "mirt", "MVN", "plyr", "polycor", "psych", "rJava", "rstudioapi", "scales", "semPlot", "shiny", "shinyBS", "shinycustomloader", "ShinyItemAnalysis", "shinyjs", "shinythemes", "shinyWidgets", "xlsx"] + "depends": ["DT", "GPArotation", "MVN", "Metrics", "ShinyItemAnalysis", "catR", "foreign", "ggplot2", "gt", "hornpa", "igraph", "lavaan", "ltm", "mirt", "plyr", "polycor", "psych", "rJava", "rstudioapi", "scales", "semPlot", "shiny", "shinyBS", "shinyWidgets", "shinycustomloader", "shinyjs", "shinythemes", "xlsx"] }, "RSQL": { "name": "RSQL", "version": "0.2.2", "sha256": "1k0s32lcfr2ari7jrkspmzf9ygpz4h737yigz3lkwj5k2r9ls2ax", - "depends": ["DBI", "lgr", "R6"] + "depends": ["DBI", "R6", "lgr"] }, "RSQLite": { "name": "RSQLite", "version": "2.3.7", "sha256": "1kllna6hfnyy3rizr8wkpfn7p5sxv3sra12x9vz68hp6i4jmgq15", - "depends": ["bit64", "blob", "cpp11", "DBI", "memoise", "pkgconfig", "plogr", "rlang"] + "depends": ["DBI", "bit64", "blob", "cpp11", "memoise", "pkgconfig", "plogr", "rlang"] }, "RSSL": { "name": "RSSL", "version": "0.9.7", "sha256": "1am8xv0v5b2z87y8i7m1s41aq55fx30pdnhna5dj87fql5faydqx", - "depends": ["cluster", "dplyr", "ggplot2", "kernlab", "MASS", "Matrix", "quadprog", "Rcpp", "RcppArmadillo", "reshape2", "scales", "tidyr"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "cluster", "dplyr", "ggplot2", "kernlab", "quadprog", "reshape2", "scales", "tidyr"] }, "RSSOP": { "name": "RSSOP", @@ -27527,7 +27809,7 @@ "name": "RSiena", "version": "1.4.7", "sha256": "0hvjd0f80p5icrzd4qa01349pkc5884l2p00m580aqiigri49d1q", - "depends": ["lattice", "MASS", "Matrix", "xtable"] + "depends": ["MASS", "Matrix", "lattice", "xtable"] }, "RSizeBiased": { "name": "RSizeBiased", @@ -27555,8 +27837,8 @@ }, "RSpectra": { "name": "RSpectra", - "version": "0.16-1", - "sha256": "16ij84wgpsmqmnxqiii8dgihy3bfxazry9znmckhwzba7m0d79fb", + "version": "0.16-2", + "sha256": "0zma49ah0sycjdx95m8mac21daa7p3gp9cg1mffygzhrjpblkwd2", "depends": ["Matrix", "Rcpp", "RcppEigen"] }, "RSpincalc": { @@ -27581,7 +27863,7 @@ "name": "RStoolbox", "version": "1.0.0", "sha256": "1haf2pi1jzlzh077gfanby5g4lp1djz01qcdinxiq0dgs98anrl8", - "depends": ["caret", "dplyr", "exactextractr", "ggplot2", "lifecycle", "magrittr", "Rcpp", "RcppArmadillo", "reshape2", "sf", "terra", "tidyr", "XML"] + "depends": ["Rcpp", "RcppArmadillo", "XML", "caret", "dplyr", "exactextractr", "ggplot2", "lifecycle", "magrittr", "reshape2", "sf", "terra", "tidyr"] }, "RSurveillance": { "name": "RSurveillance", @@ -27593,13 +27875,13 @@ "name": "RTCC", "version": "0.1.1", "sha256": "0bnm0qwikbbpq3i5q5fwmsgi8fn7w0xk993ngpiqbrf5my3h93kc", - "depends": ["matrixStats", "Rcpp", "testthat", "vegan"] + "depends": ["Rcpp", "matrixStats", "testthat", "vegan"] }, "RTD": { "name": "RTD", "version": "0.4.1", "sha256": "0zsv62hx1y9q5a6rd8ri91ff64671b84jr3f88h0q4yni2mribhr", - "depends": ["dplyr", "httr", "jsonlite", "purrr", "RcppMsgPack", "readr", "urltools", "uuid"] + "depends": ["RcppMsgPack", "dplyr", "httr", "jsonlite", "purrr", "readr", "urltools", "uuid"] }, "RTDE": { "name": "RTDE", @@ -27617,13 +27899,13 @@ "name": "RTIGER", "version": "2.1.0", "sha256": "08gs26wv6jnd4rzdhb87as26aslgqs128x1ip8h9nmr3l9mwg5fq", - "depends": ["e1071", "extraDistr", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "JuliaCall", "qpdf", "reshape2", "TailRank"] + "depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "JuliaCall", "TailRank", "e1071", "extraDistr", "ggplot2", "qpdf", "reshape2"] }, "RTL": { "name": "RTL", "version": "1.3.5", "sha256": "0ajdrwg8g68imwj21l9mh8q9n1xc00d8lxw60p6vnb39m730d8vg", - "depends": ["dplyr", "ggplot2", "glue", "httr", "jsonlite", "lifecycle", "lubridate", "magrittr", "PerformanceAnalytics", "plotly", "purrr", "Rcpp", "readr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "timetk", "tsibble", "TTR", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "Rcpp", "TTR", "dplyr", "ggplot2", "glue", "httr", "jsonlite", "lifecycle", "lubridate", "magrittr", "plotly", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "timetk", "tsibble", "xts", "zoo"] }, "RTLknitr": { "name": "RTLknitr", @@ -27641,7 +27923,7 @@ "name": "RTSA", "version": "0.2.2", "sha256": "1fkr374y7pjv99g2b0cdcr5qhfjnjwl52p39w4fvw7iv4ahvvxs1", - "depends": ["ggplot2", "metafor", "Rcpp", "scales"] + "depends": ["Rcpp", "ggplot2", "metafor", "scales"] }, "RTTWebClient": { "name": "RTTWebClient", @@ -27659,13 +27941,13 @@ "name": "RTextTools", "version": "1.4.3", "sha256": "0fxjviqc36k06rn8xzbi8ylzzj9zgf3zsp6xv0kssakss1a45lzz", - "depends": ["caTools", "e1071", "glmnet", "ipred", "nnet", "randomForest", "SparseM", "tau", "tm", "tree"] + "depends": ["SparseM", "caTools", "e1071", "glmnet", "ipred", "nnet", "randomForest", "tau", "tm", "tree"] }, "RTransferEntropy": { "name": "RTransferEntropy", "version": "0.2.21", "sha256": "05n97mwaxjika81bwwbx6vrsshdcd8h0n28iji2q7qwkk0746imd", - "depends": ["future", "future_apply", "Rcpp"] + "depends": ["Rcpp", "future", "future_apply"] }, "RTriangle": { "name": "RTriangle", @@ -27683,19 +27965,19 @@ "name": "RVA", "version": "0.0.5", "sha256": "1a0av2vhqnkc4w76q5dhds0p12icmkkxyr1d04rsd83srwkwh4fb", - "depends": ["circlize", "clusterProfiler", "ComplexHeatmap", "data_table", "dplyr", "edgeR", "ggplot2", "ggpubr", "gridExtra", "GSEABase", "GSVAdata", "haven", "msigdbr", "org_Hs_eg_db", "plotly", "purrr", "rlang", "rWikiPathways", "stringr", "tibble", "tidyr", "XML"] + "depends": ["ComplexHeatmap", "GSEABase", "GSVAdata", "XML", "circlize", "clusterProfiler", "data_table", "dplyr", "edgeR", "ggplot2", "ggpubr", "gridExtra", "haven", "msigdbr", "org_Hs_eg_db", "plotly", "purrr", "rWikiPathways", "rlang", "stringr", "tibble", "tidyr"] }, "RVAideMemoire": { "name": "RVAideMemoire", "version": "0.9-83-7", "sha256": "1ix6v1m4h1wffvgmzhrzdgj5268z54bnd02wqivrjf32pi7s9vn5", - "depends": ["ade4", "boot", "car", "FactoMineR", "lme4", "MASS", "nnet", "pls", "pspearman", "vegan"] + "depends": ["FactoMineR", "MASS", "ade4", "boot", "car", "lme4", "nnet", "pls", "pspearman", "vegan"] }, "RVCompare": { "name": "RVCompare", "version": "0.1.8", "sha256": "0dqz0c3idy9nzb9mlmlnyq05zql0nca1na7qxbgk136g4spbr1n3", - "depends": ["ggplot2", "pracma", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "pracma"] }, "RVIpkg": { "name": "RVIpkg", @@ -27725,13 +28007,13 @@ "name": "RWDataPlyr", "version": "0.6.4", "sha256": "1jjra885339n6kpqz28rn9byy4md4s0k47m6ll4a6srd4hsf3ni3", - "depends": ["data_table", "dplyr", "feather", "Rcpp", "tibble", "tidyr", "xts", "zoo"] + "depends": ["Rcpp", "data_table", "dplyr", "feather", "tibble", "tidyr", "xts", "zoo"] }, "RWeka": { "name": "RWeka", "version": "0.4-46", "sha256": "0rsbz7ck7z4bjk9qrwrr4nq30b1iv3kwkkwx9jcrph832xw5a1b6", - "depends": ["rJava", "RWekajars"] + "depends": ["RWekajars", "rJava"] }, "RWekajars": { "name": "RWekajars", @@ -27767,13 +28049,13 @@ "name": "RWsearch", "version": "5.1.4", "sha256": "09rkq84ppy6f6ak229wim5y0zd295saabh3q4lmv23zi6z3a9ngh", - "depends": ["brew", "latexpdf", "networkD3", "sig", "sos", "XML"] + "depends": ["XML", "brew", "latexpdf", "networkD3", "sig", "sos"] }, "RXKCD": { "name": "RXKCD", "version": "1.9.2", "sha256": "1yk12ic6kdbwc44ppag2yfnga7xjmifkglhvcw93vc3qg469mm15", - "depends": ["jpeg", "plyr", "png", "RJSONIO"] + "depends": ["RJSONIO", "jpeg", "plyr", "png"] }, "RXshrink": { "name": "RXshrink", @@ -27785,7 +28067,7 @@ "name": "RYandexTranslate", "version": "1.0", "sha256": "0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s", - "depends": ["httr", "jsonlite", "RCurl"] + "depends": ["RCurl", "httr", "jsonlite"] }, "RZabbix": { "name": "RZabbix", @@ -27803,7 +28085,7 @@ "name": "RZooRoH", "version": "0.3.2.1", "sha256": "02sz2hgddgws4qwwvqgcd470r7ffyzs88r90mnhjl3889a5ixkml", - "depends": ["data_table", "doParallel", "foreach", "iterators", "RColorBrewer"] + "depends": ["RColorBrewer", "data_table", "doParallel", "foreach", "iterators"] }, "RaJIVE": { "name": "RaJIVE", @@ -27821,19 +28103,19 @@ "name": "RaSEn", "version": "3.0.0", "sha256": "1a7jvyvvhzn4aifnhjldn5jr6sxh16b67x335p8wh8g24yvvglvw", - "depends": ["caret", "class", "doParallel", "e1071", "FNN", "foreach", "formatR", "ggplot2", "glmnet", "gridExtra", "KernelKnn", "MASS", "ModelMetrics", "nnet", "randomForest", "ranger", "rpart"] + "depends": ["FNN", "KernelKnn", "MASS", "ModelMetrics", "caret", "class", "doParallel", "e1071", "foreach", "formatR", "ggplot2", "glmnet", "gridExtra", "nnet", "randomForest", "ranger", "rpart"] }, "RaceID": { "name": "RaceID", "version": "0.3.5", "sha256": "0jmgc2nf65ymhk88mzlmh96wwygr0gs3ca1mc0all0a5c6vxyj8b", - "depends": ["cluster", "coop", "FateID", "FNN", "fpc", "ggplot2", "harmony", "ica", "igraph", "irlba", "leiden", "locfit", "MASS", "Matrix", "matrixStats", "pheatmap", "princurve", "quadprog", "randomForest", "RColorBrewer", "Rcpp", "Rtsne", "runner", "umap", "vegan"] + "depends": ["FNN", "FateID", "MASS", "Matrix", "RColorBrewer", "Rcpp", "Rtsne", "cluster", "coop", "fpc", "ggplot2", "harmony", "ica", "igraph", "irlba", "leiden", "locfit", "matrixStats", "pheatmap", "princurve", "quadprog", "randomForest", "runner", "umap", "vegan"] }, "Racmacs": { "name": "Racmacs", "version": "1.2.9", "sha256": "0csrbmri44ykrrx25a21hnqca74w6hvsiza43k7jix26bchysynl", - "depends": ["brotli", "dplyr", "ellipsis", "ggplot2", "htmltools", "htmlwidgets", "igraph", "jsonlite", "ks", "magrittr", "MASS", "rapidjsonr", "Rcpp", "RcppArmadillo", "RcppEnsmallen", "RcppProgress", "rlang", "rmarchingcubes", "shape", "shiny", "shinyFiles", "shinyjs", "vctrs"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppEnsmallen", "RcppProgress", "brotli", "dplyr", "ellipsis", "ggplot2", "htmltools", "htmlwidgets", "igraph", "jsonlite", "ks", "magrittr", "rapidjsonr", "rlang", "rmarchingcubes", "shape", "shiny", "shinyFiles", "shinyjs", "vctrs"] }, "RadData": { "name": "RadData", @@ -27863,7 +28145,7 @@ "name": "Radviz", "version": "0.9.3", "sha256": "0ayrkax1g7x9jvkl8lni08ydm1lhcwpcbvy1xj9zk3bpd5zpll86", - "depends": ["dplyr", "ggplot2", "hexbin", "igraph", "pracma", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "hexbin", "igraph", "pracma", "rlang"] }, "RagGrid": { "name": "RagGrid", @@ -27875,7 +28157,7 @@ "name": "Rage", "version": "1.6.0", "sha256": "0scpig0glh1ajc5fp7xrdb0b5f11x1f5ls43wb6b9kjif4fi25cl", - "depends": ["DiagrammeR", "expm", "MASS", "popdemo"] + "depends": ["DiagrammeR", "MASS", "expm", "popdemo"] }, "RainfallErosivityFactor": { "name": "RainfallErosivityFactor", @@ -27923,7 +28205,7 @@ "name": "RandomProjectionTest", "version": "0.1.4", "sha256": "1pg88q7k89s33yfnqkn5d03mc3ix8ihh4q3l6064p44d98wdsw4f", - "depends": ["glue", "MASS"] + "depends": ["MASS", "glue"] }, "Randomuseragent": { "name": "Randomuseragent", @@ -27941,7 +28223,7 @@ "name": "RankAggSIgFUR", "version": "1.0.0", "sha256": "0wsmd9p3dfjs650q3b81k91fbl3bpjc8grm4233m8f941cabap8p", - "depends": ["combinat", "data_table", "plyr", "Rfast"] + "depends": ["Rfast", "combinat", "data_table", "plyr"] }, "RankAggreg": { "name": "RankAggreg", @@ -27983,7 +28265,7 @@ "name": "Rapi", "version": "1.0.5", "sha256": "044c3qs6vyijl8j21rs351jvmz2f6i864bzzy8vrh4p58j7zhq0d", - "depends": ["crayon", "digest", "dplyr", "glue", "httr", "httr2", "jsonlite", "lubridate", "magrittr", "purrr", "Rcpp", "rlang", "rlist", "stringr", "tibble"] + "depends": ["Rcpp", "crayon", "digest", "dplyr", "glue", "httr", "httr2", "jsonlite", "lubridate", "magrittr", "purrr", "rlang", "rlist", "stringr", "tibble"] }, "RapidPolygonLookup": { "name": "RapidPolygonLookup", @@ -27995,19 +28277,19 @@ "name": "RapidoPGS", "version": "2.3.0", "sha256": "0jks5v9822gk4gip7027m2l26gccrm81iazn1006n1a0871caf98", - "depends": ["bigreadr", "bigsnpr", "coloc", "curl", "data_table", "dplyr", "GenomicRanges", "IRanges", "magrittr", "RCurl"] + "depends": ["GenomicRanges", "IRanges", "RCurl", "bigreadr", "bigsnpr", "coloc", "curl", "data_table", "dplyr", "magrittr"] }, "Rapp": { "name": "Rapp", - "version": "0.1.0", - "sha256": "06rixyz2r4w82dbpr0d3z74hv0kxgd677d9c690jjnm9hrskwfbn", + "version": "0.2.0", + "sha256": "18d62wn808673qx3qclvi119i29r8pzm634x2zyy4mx59ixka9l4", "depends": ["yaml"] }, "Raquifer": { "name": "Raquifer", "version": "0.1.0", "sha256": "148inkn6yiyvicw0b4kw99n172xsvhrrdx1khghqs966smjw54wy", - "depends": ["dplyr", "gsl", "magrittr", "pracma", "Rdpack"] + "depends": ["Rdpack", "dplyr", "gsl", "magrittr", "pracma"] }, "RareComb": { "name": "RareComb", @@ -28031,7 +28313,7 @@ "name": "Rata", "version": "0.0.2", "sha256": "1s7am08691lil5hbd8jpa5wnbvr0qqf0gkxczpm6yvizbjpx16qx", - "depends": ["ggplot2", "glpkAPI", "lpSolveAPI", "reshape2", "Rirt"] + "depends": ["Rirt", "ggplot2", "glpkAPI", "lpSolveAPI", "reshape2"] }, "RatingScaleReduction": { "name": "RatingScaleReduction", @@ -28049,25 +28331,25 @@ "name": "RationalMatrix", "version": "1.0.0", "sha256": "1nzhfmvckb9hp53lyw6gyv5r492n4xii8l1xkr38p5i07r52zq2c", - "depends": ["BH", "gmp", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "gmp"] }, "Ravages": { "name": "Ravages", "version": "1.1.3", "sha256": "0scfxzfisqcj9zn50pvhy9xrl3k5bgglp11gqxf885yskdiwrkik", - "depends": ["bedr", "BH", "curl", "data_table", "dfidx", "Formula", "gaston", "mlogit", "Rcpp", "RcppEigen", "RcppParallel"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "RcppParallel", "bedr", "curl", "data_table", "dfidx", "gaston", "mlogit"] }, "RavenR": { "name": "RavenR", "version": "2.2.2", "sha256": "0z1gp1jvh0b80f5bkfg1gg7x116axfgix13hpviyh0c3mfi5yw37", - "depends": ["colorspace", "cowplot", "crayon", "DiagrammeR", "dplyr", "dygraphs", "gdata", "ggplot2", "igraph", "lubridate", "magrittr", "purrr", "Rcpp", "RCurl", "scales", "stringr", "tidyr", "visNetwork", "xts", "zoo"] + "depends": ["DiagrammeR", "RCurl", "Rcpp", "colorspace", "cowplot", "crayon", "dplyr", "dygraphs", "gdata", "ggplot2", "igraph", "lubridate", "magrittr", "purrr", "scales", "stringr", "tidyr", "visNetwork", "xts", "zoo"] }, "RawHummus": { "name": "RawHummus", "version": "0.3.3", "sha256": "0m88cywxwwiyvr2i7ipi9yf5znzdjfsmgz2x0ry4d6mm5469rws4", - "depends": ["config", "data_table", "dplyr", "ggplot2", "golem", "kableExtra", "markdown", "plotly", "purrr", "RaMS", "RColorBrewer", "rmarkdown", "shiny", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyMatrix"] + "depends": ["RColorBrewer", "RaMS", "config", "data_table", "dplyr", "ggplot2", "golem", "kableExtra", "markdown", "plotly", "purrr", "rmarkdown", "shiny", "shinyMatrix", "shinycustomloader", "shinydashboard", "shinydashboardPlus"] }, "Rbeast": { "name": "Rbeast", @@ -28097,7 +28379,7 @@ "name": "Rborist", "version": "0.3-7", "sha256": "15i5aj7p3lwp7r84kv7i9jfhwbs8r1yn44shpm9gf17kwvwzw7h1", - "depends": ["data_table", "digest", "Rcpp"] + "depends": ["Rcpp", "data_table", "digest"] }, "RbyExample": { "name": "RbyExample", @@ -28157,25 +28439,25 @@ "name": "RclusTool", "version": "0.91.6", "sha256": "03qz4k6h0z1sj2gyyq5sk7hilmynvqvvj35mrml629rxhgjyyhgs", - "depends": ["class", "cluster", "conclust", "corrplot", "e1071", "factoextra", "FactoMineR", "ggplot2", "jpeg", "knitr", "MASS", "mclust", "mda", "mmand", "nnet", "png", "randomForest", "reshape", "rlang", "SearchTrees", "sp", "stringi", "stringr", "tcltk2", "tkrplot"] + "depends": ["FactoMineR", "MASS", "SearchTrees", "class", "cluster", "conclust", "corrplot", "e1071", "factoextra", "ggplot2", "jpeg", "knitr", "mclust", "mda", "mmand", "nnet", "png", "randomForest", "reshape", "rlang", "sp", "stringi", "stringr", "tcltk2", "tkrplot"] }, "Rcmdr": { "name": "Rcmdr", "version": "2.9-2", "sha256": "175c5iqgp2j7x5vjijnklc35nbnyz0s83rzmf7qq8kxv8fv2jmw8", - "depends": ["abind", "car", "effects", "lme4", "RcmdrMisc", "relimp", "tcltk2"] + "depends": ["RcmdrMisc", "abind", "car", "effects", "lme4", "relimp", "tcltk2"] }, "RcmdrMisc": { "name": "RcmdrMisc", "version": "2.9-1", "sha256": "0khp8dw1b3v5jqbhnqxjcyyjz9hj9pb98niacn17cf9iln9rr7mc", - "depends": ["abind", "car", "colorspace", "e1071", "foreign", "haven", "Hmisc", "lattice", "MASS", "nortest", "readstata13", "readxl", "sandwich"] + "depends": ["Hmisc", "MASS", "abind", "car", "colorspace", "e1071", "foreign", "haven", "lattice", "nortest", "readstata13", "readxl", "sandwich"] }, "RcmdrPlugin_BWS1": { "name": "RcmdrPlugin.BWS1", "version": "0.2-2", "sha256": "0as8nnyfk2fjsc92rxywi36bp41zppwcx9207zywqxb0b3awdn08", - "depends": ["crossdes", "Rcmdr", "support_BWS", "support_CEs", "survival"] + "depends": ["Rcmdr", "crossdes", "support_BWS", "support_CEs", "survival"] }, "RcmdrPlugin_BWS2": { "name": "RcmdrPlugin.BWS2", @@ -28193,7 +28475,7 @@ "name": "RcmdrPlugin.BiclustGUI", "version": "1.1.3.1", "sha256": "1wb1pbwghq1xxpwlihfixx42yf1f1py3hdwh8sfpqklh63ymwifk", - "depends": ["BcDiag", "BiBitR", "BicARE", "biclust", "fabia", "gplots", "iBBiG", "Rcmdr", "s4vd", "superbiclust", "viridis"] + "depends": ["BcDiag", "BiBitR", "BicARE", "Rcmdr", "biclust", "fabia", "gplots", "iBBiG", "s4vd", "superbiclust", "viridis"] }, "RcmdrPlugin_DCCV": { "name": "RcmdrPlugin.DCCV", @@ -28217,18 +28499,18 @@ "name": "RcmdrPlugin.EACSPIR", "version": "0.2-3", "sha256": "0v7pw0m8cxpnkdm47b8jb3z94p1igi98s4r8i0gm7x7ad4fzccww", - "depends": ["abind", "ez", "nortest", "R2HTML", "Rcmdr", "RcmdrMisc", "reshape"] + "depends": ["R2HTML", "Rcmdr", "RcmdrMisc", "abind", "ez", "nortest", "reshape"] }, "RcmdrPlugin_EBM": { "name": "RcmdrPlugin.EBM", "version": "1.0-10", "sha256": "02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw", - "depends": ["abind", "epiR", "Rcmdr"] + "depends": ["Rcmdr", "abind", "epiR"] }, "RcmdrPlugin_EZR": { "name": "RcmdrPlugin.EZR", - "version": "1.67", - "sha256": "035a1ch36ygwknk2hwjxs6ir1izwbqn0iq3y0qxv8iw4qa668ar8", + "version": "1.68", + "sha256": "0ppdn3fz8y3ckhhzhn0bhis4i2wd0r2ll8xmvvp6vnx42q9vnh0z", "depends": ["Rcmdr", "readstata13"] }, "RcmdrPlugin_EcoVirtual": { @@ -28259,31 +28541,31 @@ "name": "RcmdrPlugin.HH", "version": "1.1-51", "sha256": "1kfx74nlkdyzh73cwab8gflrpw99pvjgr3ch8ikkg39h8yyi83qh", - "depends": ["HH", "lattice", "mgcv", "Rcmdr"] + "depends": ["HH", "Rcmdr", "lattice", "mgcv"] }, "RcmdrPlugin_KMggplot2": { "name": "RcmdrPlugin.KMggplot2", "version": "0.2-6", "sha256": "0xh0lfgmr5sc15f3v5avwy1zl0gk1krlw3jb1prjyk9prp8albz9", - "depends": ["ggplot2", "ggthemes", "plyr", "Rcmdr", "RColorBrewer", "scales", "survival", "tcltk2"] + "depends": ["RColorBrewer", "Rcmdr", "ggplot2", "ggthemes", "plyr", "scales", "survival", "tcltk2"] }, "RcmdrPlugin_MA": { "name": "RcmdrPlugin.MA", "version": "0.0-2", "sha256": "1zivlc0r2mkxpx23ba76njmb2wnnjijysvza4f24dg4l47d0sr2p", - "depends": ["MAd", "metafor", "Rcmdr"] + "depends": ["MAd", "Rcmdr", "metafor"] }, "RcmdrPlugin_MPAStats": { "name": "RcmdrPlugin.MPAStats", "version": "1.2.2", "sha256": "1ynj42p12ncgrbghd8w7mkyys2cq9r9dpbir57rj3k5l46yzj7d5", - "depends": ["ordinal", "Rcmdr"] + "depends": ["Rcmdr", "ordinal"] }, "RcmdrPlugin_NMBU": { "name": "RcmdrPlugin.NMBU", "version": "1.8.15", "sha256": "0y5pwwfvqdc2a6wbkjnvgrlh7251s60l74cmfi7k9n2gkzx5d34y", - "depends": ["car", "MASS", "mixlm", "phia", "pls", "Rcmdr", "xtable"] + "depends": ["MASS", "Rcmdr", "car", "mixlm", "phia", "pls", "xtable"] }, "RcmdrPlugin_PcaRobust": { "name": "RcmdrPlugin.PcaRobust", @@ -28295,25 +28577,25 @@ "name": "RcmdrPlugin.RMTCJags", "version": "1.0-2", "sha256": "04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80", - "depends": ["coda", "igraph", "Rcmdr", "rjags", "rmeta", "runjags"] + "depends": ["Rcmdr", "coda", "igraph", "rjags", "rmeta", "runjags"] }, "RcmdrPlugin_ROC": { "name": "RcmdrPlugin.ROC", "version": "1.0-19", "sha256": "1m5k8y2xy78bpyvi2cdnvmicr5dkjxb8v65blcmgrhf7i0zhhj5p", - "depends": ["pROC", "Rcmdr", "ResourceSelection"] + "depends": ["Rcmdr", "ResourceSelection", "pROC"] }, "RcmdrPlugin_RiskDemo": { "name": "RcmdrPlugin.RiskDemo", "version": "3.2", "sha256": "07v15wnmqqa69gy2kl2jkdgn9nzjj2fz5yy56gkhxczw7j6516ij", - "depends": ["data_table", "demography", "dplyr", "forecast", "ftsa", "ggplot2", "Rcmdr", "scales", "zoo"] + "depends": ["Rcmdr", "data_table", "demography", "dplyr", "forecast", "ftsa", "ggplot2", "scales", "zoo"] }, "RcmdrPlugin_TeachStat": { "name": "RcmdrPlugin.TeachStat", "version": "1.1.3", "sha256": "1l73zpy94av30x31rskzggaf6bmj7wfx1k6mksmpjmy47hk07qlg", - "depends": ["distr", "distrEx", "Hmisc", "IndexNumR", "lme4", "Rcmdr", "tcltk2", "tseries"] + "depends": ["Hmisc", "IndexNumR", "Rcmdr", "distr", "distrEx", "lme4", "tcltk2", "tseries"] }, "RcmdrPlugin_TeachingDemos": { "name": "RcmdrPlugin.TeachingDemos", @@ -28325,7 +28607,7 @@ "name": "RcmdrPlugin.UCA", "version": "5.1-1", "sha256": "15z2pyi92vznkbfqycc33b39dl2wx0kf2l5w1wv8pr85i5449dzq", - "depends": ["IQCC", "qcc", "qicharts2", "randtests", "Rcmdr", "rmarkdown", "TeachingDemos", "tseries"] + "depends": ["IQCC", "Rcmdr", "TeachingDemos", "qcc", "qicharts2", "randtests", "rmarkdown", "tseries"] }, "RcmdrPlugin_WorldFlora": { "name": "RcmdrPlugin.WorldFlora", @@ -28343,19 +28625,19 @@ "name": "RcmdrPlugin.cpd", "version": "0.2.0", "sha256": "1s0y40nh91fi6i91zvn7q106d4nnshflfnzs8m63skklsdxk3by0", - "depends": ["cpd", "Rcmdr", "RcmdrMisc"] + "depends": ["Rcmdr", "RcmdrMisc", "cpd"] }, "RcmdrPlugin_depthTools": { "name": "RcmdrPlugin.depthTools", "version": "1.4", "sha256": "16y60yymx97nh587939lahsh0mk53yy25zy6i90l9vad0r7ih23v", - "depends": ["depthTools", "Rcmdr"] + "depends": ["Rcmdr", "depthTools"] }, "RcmdrPlugin_orloca": { "name": "RcmdrPlugin.orloca", "version": "4.8.2", "sha256": "0nkszrbcprd08p0i9r6k2syg44kyqpdakmwmjf480pwydq3sz69n", - "depends": ["orloca", "orloca_es", "Rcmdr"] + "depends": ["Rcmdr", "orloca", "orloca_es"] }, "RcmdrPlugin_sos": { "name": "RcmdrPlugin.sos", @@ -28367,13 +28649,13 @@ "name": "RcmdrPlugin.survival", "version": "1.3-2", "sha256": "1kyqrpqi1gbc7vbdy524a7ifpnsx42rkz34p72cdi7qjyq8x7vs7", - "depends": ["car", "date", "Rcmdr", "survival"] + "depends": ["Rcmdr", "car", "date", "survival"] }, "RcmdrPlugin_temis": { "name": "RcmdrPlugin.temis", "version": "0.7.10", "sha256": "02rs5xdj6g57frndc87fly0ans16584j4d0rfpy1h72655cz66ab", - "depends": ["ca", "lattice", "latticeExtra", "NLP", "R2HTML", "Rcmdr", "RColorBrewer", "slam", "stringi", "tcltk2", "tm", "zoo"] + "depends": ["NLP", "R2HTML", "RColorBrewer", "Rcmdr", "ca", "lattice", "latticeExtra", "slam", "stringi", "tcltk2", "tm", "zoo"] }, "Rcompadre": { "name": "Rcompadre", @@ -28389,8 +28671,8 @@ }, "Rcpp": { "name": "Rcpp", - "version": "1.0.12", - "sha256": "1l1b0q2r6q2bjr4wvj98kp9844fyrsn2ppx339v05vmy8g65jwqc", + "version": "1.0.13", + "sha256": "1ki2vdfavwxvpw1y47kc0fpg248836zd3iw6zlspkr8kq58cdzi1", "depends": [] }, "Rcpp11": { @@ -28419,8 +28701,8 @@ }, "RcppArmadillo": { "name": "RcppArmadillo", - "version": "0.12.8.4.0", - "sha256": "0iihy2pbmc56s5s6x7ac1c1biqda60gyqkddvn2c211j0xjnigya", + "version": "14.0.0-1", + "sha256": "145sci5fkwzrngqx2ykpxvvy3wn5wjfjfl7wmw92gn9yvkxd9i40", "depends": ["Rcpp"] }, "RcppArray": { @@ -28455,8 +28737,8 @@ }, "RcppCGAL": { "name": "RcppCGAL", - "version": "5.6.3", - "sha256": "0jb410wcf9djlii2ry27xbykkanld6vngl141b6i68v40y1c2n73", + "version": "5.6.4", + "sha256": "0dll6s8asylvghdzjjj1sxckyczkdjw111bfdiz0rb0ylc27yf7x", "depends": ["Rcpp"] }, "RcppCNPy": { @@ -28469,13 +28751,13 @@ "name": "RcppCWB", "version": "0.6.4", "sha256": "17w4jz6rngwm3kqwz0v547s43xvjlxc86y9yy4hnc7blkqcp4w2g", - "depends": ["fs", "Rcpp"] + "depends": ["Rcpp", "fs"] }, "RcppCensSpatial": { "name": "RcppCensSpatial", "version": "0.3.0", "sha256": "0ghywbg2zrhd72y3hf99niqlw04gvfzfa02pa581lvvd67z19gjp", - "depends": ["ggplot2", "gridExtra", "MomTrunc", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "relliptical", "roptim", "StempCens"] + "depends": ["MomTrunc", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "StempCens", "ggplot2", "gridExtra", "mvtnorm", "relliptical", "roptim"] }, "RcppClassic": { "name": "RcppClassic", @@ -28493,7 +28775,7 @@ "name": "RcppClock", "version": "1.1", "sha256": "0h59s6f9ib6d2n1fi94bcbqw0gcpbd5zvnc3pk4kb9lm7ih4dw7b", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "RcppColors": { "name": "RcppColors", @@ -28527,8 +28809,8 @@ }, "RcppEigen": { "name": "RcppEigen", - "version": "0.3.4.0.0", - "sha256": "0djiyimgka7g3kfakb6mfaq7cxna9kn6kgib59x9p7qj24ha1m18", + "version": "0.3.4.0.1", + "sha256": "09jf5bvz77qsx4m6draarm7an07yxvip6bbmjbfsl2mm93qliv95", "depends": ["Rcpp"] }, "RcppEnsmallen": { @@ -28577,7 +28859,7 @@ "name": "RcppGreedySetCover", "version": "0.1.0", "sha256": "1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x", - "depends": ["BH", "data_table", "Rcpp"] + "depends": ["BH", "Rcpp", "data_table"] }, "RcppHMM": { "name": "RcppHMM", @@ -28607,7 +28889,7 @@ "name": "RcppJagger", "version": "0.0.2", "sha256": "1zzc7vkwylwwgrbak2z32629gbl5jq2gdfc9qq0a8fk7c7rvk988", - "depends": ["cli", "purrr", "Rcpp", "rlang"] + "depends": ["Rcpp", "cli", "purrr", "rlang"] }, "RcppLbfgsBlaze": { "name": "RcppLbfgsBlaze", @@ -28637,7 +28919,7 @@ "name": "RcppNLoptExample", "version": "0.0.1", "sha256": "1fml6hpa12q0lgg5fg6fi9lz6mckwh345pbh95mld2qagzvmg01n", - "depends": ["nloptr", "Rcpp"] + "depends": ["Rcpp", "nloptr"] }, "RcppNumerical": { "name": "RcppNumerical", @@ -28647,8 +28929,8 @@ }, "RcppParallel": { "name": "RcppParallel", - "version": "5.1.7", - "sha256": "175j0plh9gzy45sxsck0wdqfkjwdsbb17m9511czrgqsrswhxhzr", + "version": "5.1.8", + "sha256": "09m1pfblmcqh02simzvnal5qqv5swx35ls8kjggy6manv25b2mfn", "depends": [] }, "RcppProgress": { @@ -28671,8 +28953,8 @@ }, "RcppRoll": { "name": "RcppRoll", - "version": "0.3.0", - "sha256": "0srzfhzkk42kzrdjnhbb37946jp1p688rgysy6k3i2is8jb21zyb", + "version": "0.3.1", + "sha256": "1prnc3svhc2v1w97vbdzfyxh545zx2h0p9d1q4753f7ynrwdkxfj", "depends": ["Rcpp"] }, "RcppSMC": { @@ -28683,8 +28965,8 @@ }, "RcppSimdJson": { "name": "RcppSimdJson", - "version": "0.1.11", - "sha256": "1q5gqa1pp71f952wvl1fpw9r2qm92112x5irw1splf3y6k6m4r6h", + "version": "0.1.12", + "sha256": "0fvmcn56d8p0wf3ax9w7l8s72zfmxkq0pf8z5lm4v6l6vj7wrfgz", "depends": ["Rcpp"] }, "RcppSpdlog": { @@ -28775,12 +29057,12 @@ "name": "Rcurvep", "version": "1.3.1", "sha256": "1l29z50ka9n2qma1pk8gw00xhxvzxkrd07dwrd8k5b36kiql2q3y", - "depends": ["boot", "dplyr", "furrr", "ggplot2", "magrittr", "purrr", "Rdpack", "rJava", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Rdpack", "boot", "dplyr", "furrr", "ggplot2", "magrittr", "purrr", "rJava", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "Rd2md": { "name": "Rd2md", - "version": "1.0.0", - "sha256": "130y2s16404jrl6xprra9wnscbpk3adhd29br6w9y0m8ngw2wxj0", + "version": "1.0.1", + "sha256": "1xidp50s90m9kl3c0lbakzhmzlf9v9b2ikka18vsamhc6w0kk0sw", "depends": [] }, "Rd2roxygen": { @@ -28805,7 +29087,7 @@ "name": "Rdimtools", "version": "1.1.2", "sha256": "0bl8ffyy9jb6xp1jb350fj5pw3zvc1dnrdhl4vi25kl84pp30xl6", - "depends": ["ADMM", "CVXR", "maotai", "MASS", "mclustcomp", "RANN", "Rcpp", "RcppArmadillo", "RcppDE", "RcppDist", "Rdpack", "RSpectra"] + "depends": ["ADMM", "CVXR", "MASS", "RANN", "RSpectra", "Rcpp", "RcppArmadillo", "RcppDE", "RcppDist", "Rdpack", "maotai", "mclustcomp"] }, "Rdistance": { "name": "Rdistance", @@ -28815,8 +29097,8 @@ }, "Rdpack": { "name": "Rdpack", - "version": "2.6", - "sha256": "02i21i85pb5aim529byjwhmyyz9jd82mi4j26a3kay0pcn6djxba", + "version": "2.6.1", + "sha256": "0igrmi0v17jsbfa770d6rcfnkjx6l2x3shskvjzhc5xbqjbn6qir", "depends": ["rbibutils"] }, "Rdrw": { @@ -28835,7 +29117,7 @@ "name": "Rdta", "version": "1.0.1", "sha256": "0a9n78kn6vf6nkv83v2vn5hha0l7d8sdvpl7320kgs29vd2nrwzm", - "depends": ["MCMCpack", "mvtnorm", "Rdpack"] + "depends": ["MCMCpack", "Rdpack", "mvtnorm"] }, "Rduino": { "name": "Rduino", @@ -28849,35 +29131,41 @@ "sha256": "1vrmj2cmf1yz453875d234f53636a3bfr5k5ymy00f4wsjkr9pqj", "depends": ["cli", "httr", "jsonlite", "purrr", "tibble"] }, + "Rdune": { + "name": "Rdune", + "version": "1.1.1", + "sha256": "1q4jql23h4yk970dr6mk8ykjisdyn5lwrlhgjxgzwxrdkmrs92pj", + "depends": ["ggplot2"] + }, "ReAD": { "name": "ReAD", "version": "1.0.1", "sha256": "0wn8ka8mjx216py26h1fcswgv061wrcdfzdj55sryvykfxaggiir", - "depends": ["qvalue", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "qvalue"] }, "ReDaMoR": { "name": "ReDaMoR", - "version": "0.7.4", - "sha256": "14msbr297haj1v8aq61m0zbj98sphcx0q8g3883lnrabjsshkws2", - "depends": ["colourpicker", "crayon", "dplyr", "DT", "jsonlite", "magrittr", "markdown", "Matrix", "readr", "rintrojs", "rstudioapi", "shiny", "shinyjs", "visNetwork"] + "version": "0.7.6", + "sha256": "1pl5yg7dxlg719zhbsywg4y9yqn8fyk5h6kqjl37gs7czb8s6ak1", + "depends": ["DT", "Matrix", "colourpicker", "crayon", "dplyr", "jsonlite", "magrittr", "markdown", "readr", "rintrojs", "rstudioapi", "shiny", "shinyjs", "visNetwork"] }, "ReDirection": { "name": "ReDirection", "version": "1.0.1", "sha256": "0hcl09drgr93yjssw2mpdpvr084ifzylsi6140hafjpm9f9pmvkm", - "depends": ["gtools", "MASS", "pracma"] + "depends": ["MASS", "gtools", "pracma"] }, "ReIns": { "name": "ReIns", "version": "1.0.14", "sha256": "1qqgphlc7wl541nx7qrkbc66414gy0l2pi164h03ndw0s7x7k4g7", - "depends": ["doParallel", "foreach", "Rcpp", "survival"] + "depends": ["Rcpp", "doParallel", "foreach", "survival"] }, "ReMFPCA": { "name": "ReMFPCA", "version": "1.0.0", "sha256": "0q7jzya5is4ik8cjirnhixcpgda5s9a450pyksyzc05fmn7rw3rc", - "depends": ["expm", "fda", "Matrix", "R6"] + "depends": ["Matrix", "R6", "expm", "fda"] }, "ReacTran": { "name": "ReacTran", @@ -28895,7 +29183,7 @@ "name": "RealVAMS", "version": "0.4-6", "sha256": "1945vxqj4y6fci3pwrq5jr91ikx2yn91jm33fm0x1x1bzv7krcgh", - "depends": ["Matrix", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "numDeriv"] }, "Rearrangement": { "name": "Rearrangement", @@ -28913,7 +29201,7 @@ "name": "Recocrop", "version": "0.4-1", "sha256": "1drh1qssnb42p1zl45phpggxhx6is435k9f1vzga0q0dddr5q770", - "depends": ["meteor", "Rcpp", "terra"] + "depends": ["Rcpp", "meteor", "terra"] }, "Recon": { "name": "Recon", @@ -28925,7 +29213,7 @@ "name": "RecordLinkage", "version": "0.4-12.4", "sha256": "0jfissk9gcf1w78dhly01dpjlb8nyk32iz1s2n38ggk8ywd4zgbk", - "depends": ["ada", "data_table", "DBI", "e1071", "evd", "ff", "ipred", "nnet", "rpart", "RSQLite", "xtable"] + "depends": ["DBI", "RSQLite", "ada", "data_table", "e1071", "evd", "ff", "ipred", "nnet", "rpart", "xtable"] }, "RecordTest": { "name": "RecordTest", @@ -28955,7 +29243,7 @@ "name": "Rediscover", "version": "0.3.2", "sha256": "0g36j5xdc86422jc1njlab4kvlsq3z6bxigxgzsl31bf1k7kc1ra", - "depends": ["data_table", "maftools", "Matrix", "matrixStats", "PoissonBinomial", "RColorBrewer", "ShiftConvolvePoibin"] + "depends": ["Matrix", "PoissonBinomial", "RColorBrewer", "ShiftConvolvePoibin", "data_table", "maftools", "matrixStats"] }, "Redmonder": { "name": "Redmonder", @@ -28979,7 +29267,7 @@ "name": "RegCombin", "version": "0.4.1", "sha256": "14vb46d8m5w5vik7kfhsj97yil3sc6qnmyp3c6myadlsw9k3x4lj", - "depends": ["dplyr", "geometry", "Hmisc", "kableExtra", "pracma", "RationalExp", "snowfall"] + "depends": ["Hmisc", "RationalExp", "dplyr", "geometry", "kableExtra", "pracma", "snowfall"] }, "RegKink": { "name": "RegKink", @@ -29009,7 +29297,7 @@ "name": "RelDists", "version": "1.0.0", "sha256": "1dxgn8gs80cvk0i8q1j4fpayazv01hly16jawf32m03irml6kl6c", - "depends": ["BBmisc", "EstimationTools", "gamlss", "gamlss_dist", "lamW", "Rdpack", "survival", "VGAM", "zipfR"] + "depends": ["BBmisc", "EstimationTools", "Rdpack", "VGAM", "gamlss", "gamlss_dist", "lamW", "survival", "zipfR"] }, "Relatedness": { "name": "Relatedness", @@ -29027,13 +29315,13 @@ "name": "ReliabilityTheory", "version": "0.3.0", "sha256": "1vj09a2gc36cp98kai4m0wyjg6h9yldawhjimjqr5nrf70i60bg5", - "depends": ["actuar", "combinat", "FRACTION", "igraph", "mcmc", "PhaseType", "sfsmisc"] + "depends": ["FRACTION", "PhaseType", "actuar", "combinat", "igraph", "mcmc", "sfsmisc"] }, "RelimpPCR": { "name": "RelimpPCR", "version": "0.3.0", "sha256": "04ab20clx9hdk1mi3rvkkaqaxypyb27w5d90y3qpnxhgy1bjqs6r", - "depends": ["caret", "ggplot2", "logger", "relaimpo", "reshape2", "Rmisc"] + "depends": ["Rmisc", "caret", "ggplot2", "logger", "relaimpo", "reshape2"] }, "Renext": { "name": "Renext", @@ -29051,7 +29339,7 @@ "name": "Renvlp", "version": "3.4.5", "sha256": "1af1hjv66kxjljrx1ryr4c8w969jjvdd284nxsh1b7rms80iw16r", - "depends": ["Matrix", "matrixcalc", "orthogonalsplinebasis", "pls", "Rsolnp"] + "depends": ["Matrix", "Rsolnp", "matrixcalc", "orthogonalsplinebasis", "pls"] }, "RepaymentPlan": { "name": "RepaymentPlan", @@ -29063,7 +29351,7 @@ "name": "RepeatedHighDim", "version": "2.3.0", "sha256": "17zgmw78lz6ymz8371g03kasfnrj5z9dhhfpgjpfq4ba3g0mvxlx", - "depends": ["ddalpha", "geometry", "MASS", "mvtnorm", "netmeta", "nlme", "progress", "rgl"] + "depends": ["MASS", "ddalpha", "geometry", "mvtnorm", "netmeta", "nlme", "progress", "rgl"] }, "RepertoiR": { "name": "RepertoiR", @@ -29097,21 +29385,21 @@ }, "ReporterScore": { "name": "ReporterScore", - "version": "0.1.5", - "sha256": "0dcxaf8yvcvzxwfk3y8knkk03qr9wa5g382k0cllxjwq8ly0nxcw", + "version": "0.1.6", + "sha256": "13ha7xncl1slmvhi2pb6l4qwzmgrmj1fp2m6vmwxbig7fvcw0rkg", "depends": ["dplyr", "foreach", "ggnewscale", "ggplot2", "ggrepel", "magrittr", "pcutils", "reshape2", "scales", "stringr"] }, "Require": { "name": "Require", - "version": "0.3.1", - "sha256": "1d87vzxix2lwqjkl5h5kcpvjyd794li5z8vxf1r5dyd7nzmkm1qq", - "depends": ["data_table"] + "version": "1.0.1", + "sha256": "0038rr91hfx7q0rcbkl76sjjykx2wnxr5fc6zdgfqy31p0j6c9aj", + "depends": ["data_table", "sys"] }, "ResIN": { "name": "ResIN", "version": "1.1.0", "sha256": "0m40s7qsxpphja4cw8d6f7aq5vphqzkqzy61jpa17bnyfq0v9v2d", - "depends": ["DirectedClustering", "dplyr", "fastDummies", "ggplot2", "igraph", "Matrix", "qgraph", "wCorr"] + "depends": ["DirectedClustering", "Matrix", "dplyr", "fastDummies", "ggplot2", "igraph", "qgraph", "wCorr"] }, "ResPBIBD": { "name": "ResPBIBD", @@ -29123,7 +29411,7 @@ "name": "ResearchAssociate", "version": "1.0.1", "sha256": "00j339ngc72gn2gyn1irjmazrv6l5nbsy3z25r6j1zrjwsbay15p", - "depends": ["ggplot2", "plyr", "rentrez", "XML"] + "depends": ["XML", "ggplot2", "plyr", "rentrez"] }, "ResidentialEnergyConsumption": { "name": "ResidentialEnergyConsumption", @@ -29147,25 +29435,37 @@ "name": "RespirAnalyzer", "version": "1.0.2", "sha256": "00qyylmnjlw7hd56bgf48p2za4dqmm7nk7j17g9n219hz11yx0pi", - "depends": ["pracma", "Rcpp", "signal"] + "depends": ["Rcpp", "pracma", "signal"] }, "RestRserve": { "name": "RestRserve", "version": "1.2.3", "sha256": "0d5ppgasaqpgvdi1spxlhp4ywpafbphlhkqfcfvgxrdm6y9igl2c", - "depends": ["checkmate", "digest", "jsonlite", "mime", "R6", "Rcpp", "Rserve", "uuid"] + "depends": ["R6", "Rcpp", "Rserve", "checkmate", "digest", "jsonlite", "mime", "uuid"] }, "RestoreNet": { "name": "RestoreNet", "version": "1.0.1", "sha256": "1lgdx6kqd5hqrj36p3vhgy42haj74dwb75gdjka61ms4j7l514hf", - "depends": ["ggplot2", "Matrix", "RColorBrewer", "scales", "scatterpie", "stringr", "xtable"] + "depends": ["Matrix", "RColorBrewer", "ggplot2", "scales", "scatterpie", "stringr", "xtable"] + }, + "ResultModelManager": { + "name": "ResultModelManager", + "version": "0.5.9", + "sha256": "0adjf9b9j4qmn55zlh6sq55vdvpkdbfkbbwvjy0d2y8bw0yfscxs", + "depends": ["DBI", "DatabaseConnector", "ParallelLogger", "R6", "SqlRender", "checkmate", "dbplyr", "dplyr", "fastmap", "lubridate", "pool", "readr", "rlang", "withr", "zip"] + }, + "ReturnCurves": { + "name": "ReturnCurves", + "version": "1.0", + "sha256": "0bcj8qcky9hqgnm2b1m7c207bx6ybzmd9v6v7ri20mddmxbpkz15", + "depends": ["DT", "Rdpack", "evd", "ggplot2", "gridExtra", "ismev", "mathjaxr", "openair", "shiny", "shinydashboard"] }, "RevEcoR": { "name": "RevEcoR", "version": "0.99.3", "sha256": "1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj", - "depends": ["gtools", "igraph", "magrittr", "Matrix", "plyr", "purrr", "stringr", "XML"] + "depends": ["Matrix", "XML", "gtools", "igraph", "magrittr", "plyr", "purrr", "stringr"] }, "RevGadgets": { "name": "RevGadgets", @@ -29183,7 +29483,7 @@ "name": "ReviewR", "version": "2.3.10", "sha256": "1h5vgqxvx5cjcwgrj7ayc7b1xzkgyndif46pjfmaz4pw1sz8990h", - "depends": ["bigrquery", "config", "DBI", "dbplyr", "dplyr", "DT", "gargle", "glue", "golem", "httr", "jsonlite", "magrittr", "purrr", "redcapAPI", "REDCapR", "rlang", "RPostgres", "RSQLite", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "shinyWidgets", "snakecase", "stringr", "tibble", "tidyr"] + "depends": ["DBI", "DT", "REDCapR", "RPostgres", "RSQLite", "bigrquery", "config", "dbplyr", "dplyr", "gargle", "glue", "golem", "httr", "jsonlite", "magrittr", "purrr", "redcapAPI", "rlang", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "snakecase", "stringr", "tibble", "tidyr"] }, "Revticulate": { "name": "Revticulate", @@ -29195,7 +29495,7 @@ "name": "Rexperigen", "version": "0.2.1", "sha256": "158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw", - "depends": ["digest", "jsonlite", "RCurl"] + "depends": ["RCurl", "digest", "jsonlite"] }, "RfEmpImp": { "name": "RfEmpImp", @@ -29243,7 +29543,7 @@ "name": "Rforestry", "version": "0.10.0", "sha256": "1h5bnaakpig7b2041s43kfljywdbdq6kkvv3agld2953nn8kcbw3", - "depends": ["glmnet", "onehot", "pROC", "Rcpp", "RcppArmadillo", "RcppThread", "visNetwork"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "glmnet", "onehot", "pROC", "visNetwork"] }, "Rfractran": { "name": "Rfractran", @@ -29255,7 +29555,7 @@ "name": "Rfssa", "version": "3.1.0", "sha256": "0knz199h29ph6qxbasrjqdyhgsqnrmp83syz3d3mblqnlz3ar1mi", - "depends": ["dplyr", "fda", "ftsa", "ggplot2", "lattice", "markdown", "plotly", "rainbow", "Rcpp", "RcppArmadillo", "RcppEigen", "RSpectra", "Rssa", "shiny", "tibble"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "RcppEigen", "Rssa", "dplyr", "fda", "ftsa", "ggplot2", "lattice", "markdown", "plotly", "rainbow", "shiny", "tibble"] }, "Rgb": { "name": "Rgb", @@ -29273,7 +29573,7 @@ "name": "Rgff", "version": "0.1.6", "sha256": "1prcjnr4zvp8ksrnzrvz7zmwbsximhg3aifa1wsz6h9aa3pcl2gl", - "depends": ["data_tree", "dplyr", "magrittr", "RJSONIO", "rlang", "stringi", "tibble", "tidyr", "withr"] + "depends": ["RJSONIO", "data_tree", "dplyr", "magrittr", "rlang", "stringi", "tibble", "tidyr", "withr"] }, "Rglpk": { "name": "Rglpk", @@ -29285,7 +29585,7 @@ "name": "Rgof", "version": "1.2.2", "sha256": "0csya8lkjj3w1pwr6g0avs17na07rfnfpx5z9s01vcql92v8aii0", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "RgoogleMaps": { "name": "RgoogleMaps", @@ -29303,25 +29603,25 @@ "name": "Ricrt", "version": "0.1.0", "sha256": "12fj6q5disl5vmpcwfvf64zqxjw2srrvbvpy10gy81k5lidzznqc", - "depends": ["dplyr", "glmnet", "randomForest", "Rdpack", "rlang", "SuperLearner", "tidyverse"] + "depends": ["Rdpack", "SuperLearner", "dplyr", "glmnet", "randomForest", "rlang", "tidyverse"] }, "RiemBase": { "name": "RiemBase", "version": "0.2.5", "sha256": "1ikv7n8hp23a5dbmnfypdkx74vxwjd9br0hvysnhhpg1ffvr5vhi", - "depends": ["pracma", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "pracma"] }, "Riemann": { "name": "Riemann", "version": "0.1.4", "sha256": "1a3mlfgnzdvl5x1nqnmm4v3xb2nkdq87c21m6xyxbm7zh5vx5b6m", - "depends": ["CVXR", "DEoptim", "lpSolve", "maotai", "Matrix", "Rcpp", "RcppArmadillo", "Rdimtools", "Rdpack", "RiemBase", "T4cluster"] + "depends": ["CVXR", "DEoptim", "Matrix", "Rcpp", "RcppArmadillo", "Rdimtools", "Rdpack", "RiemBase", "T4cluster", "lpSolve", "maotai"] }, "Riex": { "name": "Riex", "version": "1.0.2", "sha256": "03627dik6dd9d2kwv757zanh0i4invmcwg162m9ayhv41ygj5z1l", - "depends": ["dplyr", "ggplot2", "httr", "purrr", "quantmod", "rjson", "stringr", "tibble", "tidyr", "TTR", "urltools", "xts", "zoo"] + "depends": ["TTR", "dplyr", "ggplot2", "httr", "purrr", "quantmod", "rjson", "stringr", "tibble", "tidyr", "urltools", "xts", "zoo"] }, "Rigma": { "name": "Rigma", @@ -29339,7 +29639,7 @@ "name": "Rirt", "version": "0.0.2", "sha256": "0npd2g3a4dh5hlj6l06k1pf0j4731ybqqd4mpi4id16nf81cg104", - "depends": ["ggplot2", "Rcpp", "reshape2"] + "depends": ["Rcpp", "ggplot2", "reshape2"] }, "Risk": { "name": "Risk", @@ -29347,6 +29647,12 @@ "sha256": "1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg", "depends": [] }, + "RiskMap": { + "name": "RiskMap", + "version": "0.1.0", + "sha256": "17najil5lddwbzwd1ja44jpiwp2iva2y27p6lw0s0qhnlyr8vz4y", + "depends": ["Matrix", "ggplot2", "maxLik", "sf", "terra", "xtable"] + }, "RiskPortfolios": { "name": "RiskPortfolios", "version": "2.1.7", @@ -29355,9 +29661,9 @@ }, "RiskScorescvd": { "name": "RiskScorescvd", - "version": "0.1.0", - "sha256": "1lh0ag5k72msvj2pg3v2ajvwysjd638hxbifqklvsv5qjv7hzwfy", - "depends": ["dplyr", "PooledCohort"] + "version": "0.2.0", + "sha256": "0mv4xk98l8pq7s6bx246h5w8k49yhv4x5m5gajrg5kxq1mgcjfh4", + "depends": ["PooledCohort", "dplyr"] }, "Rita": { "name": "Rita", @@ -29375,7 +29681,7 @@ "name": "RivRetrieve", "version": "0.1.5", "sha256": "1lrm5rmnn9wk5r1xfmlnhgfwjz1s0kyck9iy71fc01d2b37lh6wz", - "depends": ["BBmisc", "dataRetrieval", "devtools", "dplyr", "httr", "jsonlite", "lubridate", "readr", "rlang", "rlist", "RSelenium", "rvest", "stringr", "tibble", "tidyhydat", "tidyr"] + "depends": ["BBmisc", "RSelenium", "dataRetrieval", "devtools", "dplyr", "httr", "jsonlite", "lubridate", "readr", "rlang", "rlist", "rvest", "stringr", "tibble", "tidyhydat", "tidyr"] }, "RiverBuilder": { "name": "RiverBuilder", @@ -29403,15 +29709,15 @@ }, "Rlabkey": { "name": "Rlabkey", - "version": "3.2.2", - "sha256": "1s7j9vcy0mb358wk0rdc73g94i1xpi3cwxw33gsw0cvga4pmhk6s", - "depends": ["httr", "jsonlite", "Rcpp"] + "version": "3.2.3", + "sha256": "17z9fk89wj81z3cfs1g545im87191jbkh4ka849nra51dpdq4zmi", + "depends": ["Rcpp", "httr", "jsonlite"] }, "Rlgt": { "name": "Rlgt", - "version": "0.2-1", - "sha256": "0hrqishf056d8nivm2rya2xxpdzmn69ajnxdp9w39fhdfjhzv90p", - "depends": ["BH", "forecast", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sn", "StanHeaders", "truncnorm"] + "version": "0.2-2", + "sha256": "1c23flwrw2b361dgjms3h5407w3ll98gsbsy0nmi3000wza5xdzz", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "forecast", "rstan", "rstantools", "sn", "truncnorm"] }, "Rlibeemd": { "name": "Rlibeemd", @@ -29423,13 +29729,13 @@ "name": "Rlibkdv", "version": "1.1", "sha256": "1lcmnc50bfnrnw03bs3lsxdsj2n3qylfw51w6kvnz9x1qmr9p54p", - "depends": ["leaflet", "magrittr", "raster", "Rcpp", "sf"] + "depends": ["Rcpp", "leaflet", "magrittr", "raster", "sf"] }, "Rlinkedin": { "name": "Rlinkedin", "version": "0.2", "sha256": "15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56", - "depends": ["httpuv", "httr", "XML"] + "depends": ["XML", "httpuv", "httr"] }, "Rlinsolve": { "name": "Rlinsolve", @@ -29519,7 +29825,7 @@ "name": "Rmst", "version": "0.0.3", "sha256": "1fykpii17k460qlsjhhh5vag02lhkyk5l3zjmg8hifqp0cjhz2fl", - "depends": ["ggplot2", "Rata", "reshape2", "Rirt"] + "depends": ["Rata", "Rirt", "ggplot2", "reshape2"] }, "Rnanoflann": { "name": "Rnanoflann", @@ -29537,7 +29843,7 @@ "name": "Rnest", "version": "0.0.0.1", "sha256": "0fj1a1qsc8v238nv1dsrdw1398ah3qpf5dgimdgipkznb5dnjjc7", - "depends": ["crayon", "EFA_MRFA", "fungible", "ggplot2", "MASS", "scales"] + "depends": ["EFA_MRFA", "MASS", "crayon", "fungible", "ggplot2", "scales"] }, "Rnightly": { "name": "Rnightly", @@ -29549,7 +29855,7 @@ "name": "Rnmr1D", "version": "1.3.2", "sha256": "0apkwrsxcp2frq9lmfn70dn2ajaiswnbvfjmqc7lbrimya3pwznb", - "depends": ["base64enc", "doParallel", "foreach", "ggplot2", "igraph", "impute", "MASS", "MassSpecWavelet", "Matrix", "minqa", "plotly", "plyr", "ptw", "Rcpp", "scales", "signal", "XML"] + "depends": ["MASS", "MassSpecWavelet", "Matrix", "Rcpp", "XML", "base64enc", "doParallel", "foreach", "ggplot2", "igraph", "impute", "minqa", "plotly", "plyr", "ptw", "scales", "signal"] }, "Rnumerai": { "name": "Rnumerai", @@ -29567,25 +29873,25 @@ "name": "RoBMA", "version": "3.1.0", "sha256": "0cq1hjm49sj4lnzvninf6wlpm0p0rbw3mk6sa36167b6snr6rra2", - "depends": ["BayesTools", "ggplot2", "mvtnorm", "Rdpack", "rjags", "rlang", "runjags", "scales"] + "depends": ["BayesTools", "Rdpack", "ggplot2", "mvtnorm", "rjags", "rlang", "runjags", "scales"] }, "RoBSA": { "name": "RoBSA", "version": "1.0.2", "sha256": "1hk4pdkgqjqhn7wxzzgw1f1rz4kk3gri7wispzz0m3nxk7bksw6b", - "depends": ["BayesTools", "coda", "Rdpack", "rjags", "rlang", "runjags", "scales", "survival"] + "depends": ["BayesTools", "Rdpack", "coda", "rjags", "rlang", "runjags", "scales", "survival"] }, "RoBTT": { "name": "RoBTT", "version": "1.3.0", "sha256": "00yrl6l6pz1y8j5qwhvwg84lcxvisp578i9fsd3iv9f3hfhsw9nh", - "depends": ["BayesTools", "BH", "bridgesampling", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "BayesTools", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "bridgesampling", "ggplot2", "rstan", "rstantools"] }, "RobAStBase": { "name": "RobAStBase", "version": "1.2.5", "sha256": "16sl3nlb1cl3xyski05l0qhrl23w615sbdmvnnzxnkva6sppxqcx", - "depends": ["distr", "distrEx", "distrMod", "RandVar", "rrcov", "startupmsg"] + "depends": ["RandVar", "distr", "distrEx", "distrMod", "rrcov", "startupmsg"] }, "RobAStRDA": { "name": "RobAStRDA", @@ -29597,37 +29903,37 @@ "name": "RobExtremes", "version": "1.3.0", "sha256": "0dziaykrnhy8ijbq0pxwl5p9xjlbz3kxkmwl3s21kmjnv7nm8sx4", - "depends": ["actuar", "distr", "distrEx", "distrMod", "evd", "RandVar", "RobAStBase", "RobAStRDA", "robustbase", "ROptEst", "startupmsg"] + "depends": ["ROptEst", "RandVar", "RobAStBase", "RobAStRDA", "actuar", "distr", "distrEx", "distrMod", "evd", "robustbase", "startupmsg"] }, "RobGARCHBoot": { "name": "RobGARCHBoot", "version": "1.2.0", "sha256": "142r6cmzwhg4xfbpbgrvngncm2wczly2arg6p8612ypjsk4yinrf", - "depends": ["doParallel", "doRNG", "foreach", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "doRNG", "foreach"] }, "RobKF": { "name": "RobKF", "version": "1.0.2", "sha256": "0jmc11s9gl4fin4p6wwd79m3zqbr65p1x8h69qcxmx4cy9af54kq", - "depends": ["ggplot2", "Matrix", "Rcpp", "RcppEigen", "Rdpack", "reshape2"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rdpack", "ggplot2", "reshape2"] }, "RobLox": { "name": "RobLox", "version": "1.2.1", "sha256": "0dc1hrzx63wv85djzivzimzkjj4ywilm3xm5kmqlmrkfpzsm9qs2", - "depends": ["Biobase", "distr", "distrMod", "lattice", "RandVar", "RColorBrewer", "RobAStBase"] + "depends": ["Biobase", "RColorBrewer", "RandVar", "RobAStBase", "distr", "distrMod", "lattice"] }, "RobLoxBioC": { "name": "RobLoxBioC", "version": "1.2.2", "sha256": "1fhf5svfb1sf792aj9xydaj8r9d99ia68b9n5g4nha1ia8jcixwl", - "depends": ["affy", "AnnotationDbi", "beadarray", "Biobase", "BiocGenerics", "distr", "distrMod", "lattice", "RColorBrewer", "RobLox"] + "depends": ["AnnotationDbi", "Biobase", "BiocGenerics", "RColorBrewer", "RobLox", "affy", "beadarray", "distr", "distrMod", "lattice"] }, "RobMixReg": { "name": "RobMixReg", "version": "1.1.0", "sha256": "13w6zvncwh561wzzqy548x0w25rnzf0pfvi5cc6mzn71x5l7cmh2", - "depends": ["dplyr", "flexmix", "glmnet", "gplots", "gtools", "lars", "MASS", "RColorBrewer", "rlang", "robust", "robustbase", "scales"] + "depends": ["MASS", "RColorBrewer", "dplyr", "flexmix", "glmnet", "gplots", "gtools", "lars", "rlang", "robust", "robustbase", "scales"] }, "RobPer": { "name": "RobPer", @@ -29639,7 +29945,7 @@ "name": "RobRegression", "version": "0.1.0", "sha256": "11mlxqvrlf8wlmwa44jcp3rxac7yykwa1n0fsmn861zl9b4969y8", - "depends": ["capushe", "DescTools", "doParallel", "fastmatrix", "foreach", "KneeArrower", "mvtnorm", "Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["DescTools", "KneeArrower", "RSpectra", "Rcpp", "RcppArmadillo", "capushe", "doParallel", "fastmatrix", "foreach", "mvtnorm"] }, "RobStatTM": { "name": "RobStatTM", @@ -29651,7 +29957,7 @@ "name": "RobinCar", "version": "0.3.0", "sha256": "0pyp73fk871ka85ci2il7cmb2g7cqrj7c53k73x5yr1kp51srxb0", - "depends": ["AIPW", "broom", "data_table", "dplyr", "emulator", "fastDummies", "magrittr", "MASS", "numDeriv", "rlang", "SuperLearner", "survival", "tidyr", "tidyverse"] + "depends": ["AIPW", "MASS", "SuperLearner", "broom", "data_table", "dplyr", "emulator", "fastDummies", "magrittr", "numDeriv", "rlang", "survival", "tidyr", "tidyverse"] }, "RobinHood": { "name": "RobinHood", @@ -29669,7 +29975,7 @@ "name": "RobustANOVA", "version": "0.3.0", "sha256": "1kpvahxipcmsqk6mv2zagcvw0glmsj0xkpf6f3gjnckin6mxnjyv", - "depends": ["optimbase", "PEIP"] + "depends": ["PEIP", "optimbase"] }, "RobustBF": { "name": "RobustBF", @@ -29687,19 +29993,19 @@ "name": "RobustCalibration", "version": "0.5.5", "sha256": "0ilbj88bgjymyyn7jh7dnxhhba7xrmpsnhkwr1cr53zd9rpywfdf", - "depends": ["nloptr", "Rcpp", "RcppEigen", "RobustGaSP"] + "depends": ["Rcpp", "RcppEigen", "RobustGaSP", "nloptr"] }, "RobustGaSP": { "name": "RobustGaSP", "version": "0.6.6", "sha256": "1pcy0n4krshjw9c4g41m7487qydrjbh45yqg77i74s5bvwd47fnp", - "depends": ["nloptr", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "nloptr"] }, "RobustIV": { "name": "RobustIV", "version": "0.2.5", "sha256": "1iz5g0ynkx38vdsf7rm8haai7a8igw3rdqrgxllahnbykwhm4d51", - "depends": ["CVXR", "glmnet", "igraph", "intervals", "MASS", "Matrix"] + "depends": ["CVXR", "MASS", "Matrix", "glmnet", "igraph", "intervals"] }, "RobustLinearReg": { "name": "RobustLinearReg", @@ -29715,8 +30021,8 @@ }, "Robyn": { "name": "Robyn", - "version": "3.10.3", - "sha256": "1nsicscgdp85mhvwb3i6liqhvkszj5x3z6rhm6v3vq7mfxwfn7rf", + "version": "3.11.1", + "sha256": "0bcam3ki00s4rn1jyny7n9azandpl72b4w6gm1s50iivx17w6km2", "depends": ["doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "ggridges", "glmnet", "jsonlite", "lares", "lubridate", "minpack_lm", "nloptr", "patchwork", "prophet", "reticulate", "stringr", "tidyr"] }, "RockFab": { @@ -29729,7 +30035,7 @@ "name": "Rogue", "version": "2.1.6", "sha256": "0wbgl9dj2lr5ffn27q6q06n45vj9lm9qxx07dvd37jniqjxz71v4", - "depends": ["ape", "cli", "fastmatch", "matrixStats", "Rdpack", "Rfast", "TreeDist", "TreeTools"] + "depends": ["Rdpack", "Rfast", "TreeDist", "TreeTools", "ape", "cli", "fastmatch", "matrixStats"] }, "RolWinMulCor": { "name": "RolWinMulCor", @@ -29747,7 +30053,7 @@ "name": "RonFHIR", "version": "0.4.0", "sha256": "1ajpgpp300m0zzqzzwsn8sfy8x751hrr8py9n9xvzjmkgyrh4hhw", - "depends": ["httr", "jsonlite", "R6", "stringr"] + "depends": ["R6", "httr", "jsonlite", "stringr"] }, "Rook": { "name": "Rook", @@ -29789,7 +30095,7 @@ "name": "Routliers", "version": "0.0.0.3", "sha256": "1yrzl3gqh7xkclqdqjwy4yn7qawixpb9mzw31a6wxnrr09hzv989", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "Rpadrino": { "name": "Rpadrino", @@ -29813,7 +30119,7 @@ "name": "Rphylopars", "version": "0.3.10", "sha256": "081sirrrqs42hvap4scwba3g8ciyqss11g8xipzqk96a9wfqcdf6", - "depends": ["ape", "doBy", "MASS", "Matrix", "numDeriv", "phylolm", "phytools", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "ape", "doBy", "numDeriv", "phylolm", "phytools"] }, "Rpoet": { "name": "Rpoet", @@ -29825,37 +30131,37 @@ "name": "Rpolyhedra", "version": "0.5.4", "sha256": "00wmxk8j89lyzbb7fws4g8znnqbw5dh64vqhxjg5rxjdpr3vibl8", - "depends": ["digest", "geometry", "git2r", "lgr", "R6", "rgl", "stringr", "XML"] + "depends": ["R6", "XML", "digest", "geometry", "git2r", "lgr", "rgl", "stringr"] }, "Rpoppler": { "name": "Rpoppler", - "version": "0.1-2", - "sha256": "11m3vw1an91567nf72vz2cbm520vbh6h4dmfzbrxbw24qy3y58x3", + "version": "0.1-3", + "sha256": "1nyl3zcn5664hbzcqi4r86d9imbviwis9amj1kxb2fcx70n0pr9s", "depends": [] }, "RprobitB": { "name": "RprobitB", "version": "1.1.4", "sha256": "0345cq3kjkhlbykwqzdjagixjdlw6a0ipckchky1hfm8kb4nkyzy", - "depends": ["checkmate", "cli", "crayon", "doSNOW", "foreach", "ggplot2", "gridExtra", "MASS", "mixtools", "mvtnorm", "oeli", "plotROC", "progress", "Rcpp", "RcppArmadillo", "Rdpack", "rlang", "viridis"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rdpack", "checkmate", "cli", "crayon", "doSNOW", "foreach", "ggplot2", "gridExtra", "mixtools", "mvtnorm", "oeli", "plotROC", "progress", "rlang", "viridis"] }, "Rprofet": { "name": "Rprofet", "version": "3.1.1", "sha256": "1czz920hw18afvyjm8fm9r4dzmini1qniyhsvx949qr74aj1gmal", - "depends": ["binr", "ClustOfVar", "corrplot", "dplyr", "ggplot2", "gridExtra", "kableExtra", "plyr", "purrr", "reshape2", "ROCit", "sqldf", "stringr"] + "depends": ["ClustOfVar", "ROCit", "binr", "corrplot", "dplyr", "ggplot2", "gridExtra", "kableExtra", "plyr", "purrr", "reshape2", "sqldf", "stringr"] }, "Rquake": { "name": "Rquake", "version": "2.5-1", "sha256": "0kd8ghclfz81c5lgj4fc06lgkniksch7xi6fmj1ydn2i35k0ji6l", - "depends": ["GEOmap", "MBA", "minpack_lm", "RPMG", "RSEIS"] + "depends": ["GEOmap", "MBA", "RPMG", "RSEIS", "minpack_lm"] }, "Rquefts": { "name": "Rquefts", "version": "1.2-3", "sha256": "14p9g0bqkaslr3164a58crhj024xphp9ig24mvs2ad8vxvf1gsf0", - "depends": ["meteor", "Rcpp"] + "depends": ["Rcpp", "meteor"] }, "Rramas": { "name": "Rramas", @@ -29863,12 +30169,6 @@ "sha256": "16aapvz9j81lvi5ryj41bvn3wf51b0gynnzs0jpvva4m3mvzw6an", "depends": ["diagram"] }, - "Rraven": { - "name": "Rraven", - "version": "1.0.13", - "sha256": "0nlqr1hzbzbz4rb3hjy01iw8czhaqvwmy9hh728fgl5vajwqwn8g", - "depends": ["NatureSounds", "pbapply", "seewave", "tuneR", "warbleR"] - }, "Rrdap": { "name": "Rrdap", "version": "1.0.7", @@ -29927,13 +30227,13 @@ "name": "RsimMosaic", "version": "1.0.3", "sha256": "0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji", - "depends": ["fields", "jpeg", "RANN"] + "depends": ["RANN", "fields", "jpeg"] }, "Rsmlx": { "name": "Rsmlx", "version": "2024.1.0", "sha256": "1y4pgyk0njvlgbxm0hncxjjkrfb1b10c5k7hdy4zmryz3421677j", - "depends": ["dplyr", "ggplot2", "gridExtra", "MASS", "tidyr"] + "depends": ["MASS", "dplyr", "ggplot2", "gridExtra", "tidyr"] }, "Rsolnp": { "name": "Rsolnp", @@ -29945,7 +30245,7 @@ "name": "Rsomoclu", "version": "1.7.6", "sha256": "1jbi4nib0a749k7vkqzhdb5l2jipxq9k8vi5x7i06qns8sb3ajil", - "depends": ["kohonen", "Rcpp"] + "depends": ["Rcpp", "kohonen"] }, "Rspc": { "name": "Rspc", @@ -30017,13 +30317,19 @@ "name": "Rtrack", "version": "2.0.3", "sha256": "0aq4487vj0c9hcq1vgqcyjr3pzyjx4w008x8lrhimjvsqxd5vngd", - "depends": ["crayon", "Hmisc", "KernSmooth", "openxlsx", "pbapply", "randomForest", "RCurl", "readxl", "rjson", "scales", "stringi", "terra", "zip"] + "depends": ["Hmisc", "KernSmooth", "RCurl", "crayon", "openxlsx", "pbapply", "randomForest", "readxl", "rjson", "scales", "stringi", "terra", "zip"] }, "Rtropical": { "name": "Rtropical", "version": "1.2.1", "sha256": "1r4585z1fna9s8whaq1w0drndg9cpqmrmqylj3m2ahfppb0xr3ic", - "depends": ["ape", "caret", "lpSolve", "lpSolveAPI", "RcppAlgos", "Rfast"] + "depends": ["RcppAlgos", "Rfast", "ape", "caret", "lpSolve", "lpSolveAPI"] + }, + "RtsEva": { + "name": "RtsEva", + "version": "1.0.0", + "sha256": "0bnpplsyc4k4gs5gh2hxr4597xqsfpd9kvkfhp7s802xby4hqnia", + "depends": ["POT", "changepoint", "dplyr", "evd", "ggplot2", "lubridate", "moments", "pracma", "rlang", "scales", "texmex", "tsibble", "xts"] }, "Rtsne": { "name": "Rtsne", @@ -30063,14 +30369,14 @@ }, "Rvcg": { "name": "Rvcg", - "version": "0.22.2", - "sha256": "077p4c16nqi6ayxv1i31cr6sw9fwnxpmfkmrrhzh02khpi2c2jg5", + "version": "0.23", + "sha256": "0jdhl769r99g0x9kaf1cymzjd96z2pdnha7wyy221q3w3iy81whz", "depends": ["Rcpp", "RcppArmadillo", "RcppEigen"] }, "Rveg": { "name": "Rveg", - "version": "0.1.4", - "sha256": "1a4cb19gvq1lm2v918pskpfpxl4xqb06hm08wacv7gj4wyvj7adi", + "version": "0.1.5", + "sha256": "0avnsbddsls55q9c2cbfy103yxrkay7812a2wfij27y9s7p66v3x", "depends": ["dplyr"] }, "Rwave": { @@ -30083,7 +30389,7 @@ "name": "Rwclust", "version": "0.1.0", "sha256": "0c7q2i9n22sqj3wq9m0j49y5h14848myjbixrdkic8lvv91dm438", - "depends": ["checkmate", "Matrix"] + "depends": ["Matrix", "checkmate"] }, "RweaveExtra": { "name": "RweaveExtra", @@ -30101,7 +30407,7 @@ "name": "Rwofost", "version": "0.8-3", "sha256": "1x6ia49xrdqcxilq12g47gd00smm5jdrq7xavndd3dcnvl1nqk1y", - "depends": ["meteor", "Rcpp"] + "depends": ["Rcpp", "meteor"] }, "Rwtss": { "name": "Rwtss", @@ -30113,13 +30419,13 @@ "name": "RxnSim", "version": "1.0.4", "sha256": "1cpbrqr5gx84ny0kk7y5h5awynf5mvwsavyfmg5gg539xh55pnkk", - "depends": ["data_table", "fingerprint", "rcdk", "rJava"] + "depends": ["data_table", "fingerprint", "rJava", "rcdk"] }, "Ryacas": { "name": "Ryacas", "version": "1.1.5", "sha256": "1g43rm492is2rkhjn7dv40qdmx70321sp2z7cigqfh6ffwcgbz9y", - "depends": ["magrittr", "Rcpp"] + "depends": ["Rcpp", "magrittr"] }, "Ryacas0": { "name": "Ryacas0", @@ -30137,7 +30443,7 @@ "name": "SACCR", "version": "3.2", "sha256": "1sp8hjpwzyczj85saps6a6yw30yh5098ig2xmlf79jvzv86nqgn1", - "depends": ["data_tree", "jsonlite", "Trading"] + "depends": ["Trading", "data_tree", "jsonlite"] }, "SADEG": { "name": "SADEG", @@ -30161,7 +30467,7 @@ "name": "SAFARI", "version": "0.1.0", "sha256": "10fmav9dbq5kbgy8gjsp3561vi46bjvkh2wqjs39vx5z8x1ml7i3", - "depends": ["caTools", "EBImage", "lattice", "png"] + "depends": ["EBImage", "caTools", "lattice", "png"] }, "SAFD": { "name": "SAFD", @@ -30173,13 +30479,13 @@ "name": "SAGM", "version": "1.0.0", "sha256": "10hxj5ic7mq6wzpqizkxyqc165dmpc2wqc9naf6b9r560pk52hv6", - "depends": ["fastmatrix", "GIGrvg", "mvtnorm"] + "depends": ["GIGrvg", "fastmatrix", "mvtnorm"] }, "SAGMM": { "name": "SAGMM", "version": "0.2.4", "sha256": "18ig7ncmrfs5cyc28xpbqk9zjhwqfp7gwix7y2v1j4j2wbdc2hzs", - "depends": ["lowmemtkmeans", "mclust", "MixSim", "Rcpp", "RcppArmadillo"] + "depends": ["MixSim", "Rcpp", "RcppArmadillo", "lowmemtkmeans", "mclust"] }, "SALES": { "name": "SALES", @@ -30215,7 +30521,7 @@ "name": "SAMGEP", "version": "0.1.0-1", "sha256": "01f460vk60sl3f9cg2pqcpi5r2rayjhgsp73w1ik1g4rhrs4bl9s", - "depends": ["abind", "doParallel", "foreach", "mvtnorm", "nlme", "nloptr", "pROC", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "doParallel", "foreach", "mvtnorm", "nlme", "nloptr", "pROC"] }, "SAMTx": { "name": "SAMTx", @@ -30233,13 +30539,13 @@ "name": "SAMprior", "version": "1.1.1", "sha256": "1xp3wvgjp9252l8w42fsr61bh6ggs3b21df182rw3irh2ijn1mc0", - "depends": ["assertthat", "checkmate", "ggplot2", "Metrics", "RBesT"] + "depends": ["Metrics", "RBesT", "assertthat", "checkmate", "ggplot2"] }, "SAMtool": { "name": "SAMtool", "version": "1.6.4", "sha256": "187j6i0giq45mgg1bb33ssiryipdk7ahc8jpimij3icxy9v73d4b", - "depends": ["abind", "dplyr", "gplots", "MSEtool", "pbapply", "RcppEigen", "rmarkdown", "snowfall", "TMB", "vars"] + "depends": ["MSEtool", "RcppEigen", "TMB", "abind", "dplyr", "gplots", "pbapply", "rmarkdown", "snowfall", "vars"] }, "SANple": { "name": "SANple", @@ -30251,7 +30557,7 @@ "name": "SANvi", "version": "0.1.1", "sha256": "17sb8gq4nnjn0zqgdi7xs749i8f46gswkmj0skh89hlq5m3kvrv4", - "depends": ["matrixStats", "RColorBrewer", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "matrixStats", "scales"] }, "SAP": { "name": "SAP", @@ -30269,7 +30575,7 @@ "name": "SAR", "version": "1.0.3", "sha256": "1cnf0hsq82lzssvz5xs2abvnrjxda0g6mjx70a1j223zdwjqmw64", - "depends": ["AzureRMR", "AzureStor", "dplyr", "httr", "jsonlite", "Matrix", "R6", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["AzureRMR", "AzureStor", "Matrix", "R6", "Rcpp", "RcppArmadillo", "RcppParallel", "dplyr", "httr", "jsonlite"] }, "SARP_compo": { "name": "SARP.compo", @@ -30311,13 +30617,13 @@ "name": "SAVER", "version": "1.1.2", "sha256": "1s1kw8idkaj7j90fw4qn9k0wd4vz0sblsk06ry6lm4afcar0p158", - "depends": ["doParallel", "foreach", "glmnet", "iterators", "Matrix"] + "depends": ["Matrix", "doParallel", "foreach", "glmnet", "iterators"] }, "SAiVE": { "name": "SAiVE", "version": "1.0.6", "sha256": "08f6icmr4x6kn0d7r98v9cmjqbfqgp1hzya68bl8p9fzfkjnmg4k", - "depends": ["caret", "crayon", "doParallel", "proxy", "rlang", "terra", "VSURF"] + "depends": ["VSURF", "caret", "crayon", "doParallel", "proxy", "rlang", "terra"] }, "SAutomata": { "name": "SAutomata", @@ -30329,13 +30635,13 @@ "name": "SBAGM", "version": "0.1.0", "sha256": "0vb1679016b0bhz2xlka9wgr2fxwa0447ymfncm1n5fks60rrnnf", - "depends": ["forecast", "MSGARCH", "rugarch"] + "depends": ["MSGARCH", "forecast", "rugarch"] }, "SBCK": { "name": "SBCK", "version": "1.0.0", "sha256": "1z5svxa639245jmv3bsikmbch8j4j51d7rjwhj62zcaxhb3ykhcs", - "depends": ["R6", "Rcpp", "RcppEigen", "ROOPSD", "transport"] + "depends": ["R6", "ROOPSD", "Rcpp", "RcppEigen", "transport"] }, "SBI": { "name": "SBI", @@ -30347,7 +30653,7 @@ "name": "SBICgraph", "version": "1.0.0", "sha256": "04c9xb9fdxz62qdsfkdkckvfpccrc7n5j3j5v1lgjywxq6l78wsm", - "depends": ["glmnet", "MASS", "network"] + "depends": ["MASS", "glmnet", "network"] }, "SBMSplitMerge": { "name": "SBMSplitMerge", @@ -30377,13 +30683,13 @@ "name": "SBmedian", "version": "0.1.1", "sha256": "1pxwsp6z1qvhmzprhr8f8i1id5zy4ppq7dxbd6ny2h1r1zvy16xm", - "depends": ["expm", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "expm"] }, "SC_MEB": { "name": "SC.MEB", "version": "1.1", "sha256": "04vv1ckirfmjvb3hfk3ldma96j4c6ykjgf77f13n550cvp2bhp3w", - "depends": ["BiocSingular", "ggplot2", "Matrix", "mclust", "purrr", "Rcpp", "RcppArmadillo", "S4Vectors", "scater", "scran", "SingleCellExperiment", "SummarizedExperiment"] + "depends": ["BiocSingular", "Matrix", "Rcpp", "RcppArmadillo", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "ggplot2", "mclust", "purrr", "scater", "scran"] }, "SC2API": { "name": "SC2API", @@ -30401,7 +30707,7 @@ "name": "SCBmeanfd", "version": "1.2.2", "sha256": "045498q71zqgcg8p3665vwd99a8ybf21y0sa7y8316zw66wb1caz", - "depends": ["boot", "KernSmooth"] + "depends": ["KernSmooth", "boot"] }, "SCCI": { "name": "SCCI", @@ -30413,13 +30719,13 @@ "name": "SCCS", "version": "1.7", "sha256": "0cx7xw15pwkk2nza8ng4ic6mq07vgf5idcclkwdyp3ry5j3rqnvl", - "depends": ["corpcor", "fda", "gnm", "R_methodsS3", "survival"] + "depends": ["R_methodsS3", "corpcor", "fda", "gnm", "survival"] }, "SCDB": { "name": "SCDB", "version": "0.4.0", "sha256": "0n6vmn7jjl8lp5yf53kxh2d3660sbwjnl7chiv4x7dkidi81lfnr", - "depends": ["checkmate", "DBI", "dbplyr", "dplyr", "glue", "lifecycle", "openssl", "parallelly", "purrr", "R6", "rlang", "stringr", "tidyr", "tidyselect"] + "depends": ["DBI", "R6", "checkmate", "dbplyr", "dplyr", "glue", "lifecycle", "openssl", "parallelly", "purrr", "rlang", "stringr", "tidyr", "tidyselect"] }, "SCEM": { "name": "SCEM", @@ -30449,7 +30755,7 @@ "name": "SCGLR", "version": "3.0", "sha256": "10hsvcjgsycap6wkp06snp2zab1ppsp78kyncpbjnm3vp84qm0nz", - "depends": ["ade4", "expm", "Formula", "ggplot2", "Matrix", "pROC"] + "depends": ["Formula", "Matrix", "ade4", "expm", "ggplot2", "pROC"] }, "SCI": { "name": "SCI", @@ -30467,7 +30773,13 @@ "name": "SCINA", "version": "1.2.0", "sha256": "1gv9widjwvk5j535r1zx6f41ylpa2r4168ya580llgblx85z402d", - "depends": ["gplots", "MASS"] + "depends": ["MASS", "gplots"] + }, + "SCIntRuler": { + "name": "SCIntRuler", + "version": "0.99.6", + "sha256": "1ap23iighbx1x3blfh0b9srgk5mzinl3gy0addfwd6i40a160brp", + "depends": ["Matrix", "MatrixGenerics", "Rcpp", "Seurat", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "batchelor", "coin", "cowplot", "dplyr", "ggplot2", "gridExtra", "harmony", "magrittr"] }, "SCMA": { "name": "SCMA", @@ -30491,19 +30803,19 @@ "name": "SCORNET", "version": "0.1.1", "sha256": "13aibikvrc3ril4gqki4fk4y7ha85bniqabmaifzbr1dw5xy2wxm", - "depends": ["doParallel", "foreach", "Matrix", "pracma", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "pracma", "survival"] }, "SCORPION": { "name": "SCORPION", "version": "1.0.2", "sha256": "0bkhg3y7irbigy14l9a747032ljhssvgcj1gdqs07p76k0x6fv5y", - "depends": ["cli", "igraph", "irlba", "Matrix", "pbapply", "RANN", "RhpcBLASctl"] + "depends": ["Matrix", "RANN", "RhpcBLASctl", "cli", "igraph", "irlba", "pbapply"] }, "SCORPIUS": { "name": "SCORPIUS", "version": "1.0.9", "sha256": "0i464i6fbxxcrvc48ajmz7i75sqfwizjypbbmc0mmj0dgmnxgby9", - "depends": ["dplyr", "dynutils", "dynwrap", "ggplot2", "lmds", "MASS", "Matrix", "mclust", "pbapply", "pheatmap", "princurve", "purrr", "ranger", "RANN", "RColorBrewer", "reshape2", "tidyr", "TSP"] + "depends": ["MASS", "Matrix", "RANN", "RColorBrewer", "TSP", "dplyr", "dynutils", "dynwrap", "ggplot2", "lmds", "mclust", "pbapply", "pheatmap", "princurve", "purrr", "ranger", "reshape2", "tidyr"] }, "SCOUTer": { "name": "SCOUTer", @@ -30515,7 +30827,7 @@ "name": "SCRIP", "version": "1.0.0", "sha256": "1cv8443y2s67q3krsyj7r2d1vqv01w8xr0iz8dz4kijmhksyg7ng", - "depends": ["BiocGenerics", "BiocManager", "checkmate", "crayon", "edgeR", "fitdistrplus", "knitr", "mgcv", "S4Vectors", "Seurat", "SingleCellExperiment", "splatter", "SummarizedExperiment"] + "depends": ["BiocGenerics", "BiocManager", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "checkmate", "crayon", "edgeR", "fitdistrplus", "knitr", "mgcv", "splatter"] }, "SCRT": { "name": "SCRT", @@ -30533,7 +30845,7 @@ "name": "SCdeconR", "version": "1.0.0", "sha256": "0wp7l226hw75jgi9j7n4c2f0nxlrmi3z3iv5wi5vhflvndgr95ym", - "depends": ["Biobase", "data_table", "dplyr", "edgeR", "foreach", "ggplot2", "glmGamPoi", "gtools", "harmony", "MASS", "Matrix", "mgcv", "NMF", "reshape2", "Seurat"] + "depends": ["Biobase", "MASS", "Matrix", "NMF", "Seurat", "data_table", "dplyr", "edgeR", "foreach", "ggplot2", "glmGamPoi", "gtools", "harmony", "mgcv", "reshape2"] }, "SCperf": { "name": "SCperf", @@ -30551,7 +30863,7 @@ "name": "SCtools", "version": "0.3.3", "sha256": "0mwpia145swzqgxfh0h6fzmd1v5jxwigbw2rqm4rmla60yapn5hz", - "depends": ["cvTools", "dplyr", "furrr", "future", "ggplot2", "magrittr", "purrr", "stringr", "Synth", "tidyr"] + "depends": ["Synth", "cvTools", "dplyr", "furrr", "future", "ggplot2", "magrittr", "purrr", "stringr", "tidyr"] }, "SDAR": { "name": "SDAR", @@ -30569,7 +30881,7 @@ "name": "SDCNway", "version": "1.0.1", "sha256": "0zmjc3xh4qvwyrq4ma2k6q08f4ny4iqnl5a640pj17jk8awzwbg0", - "depends": ["dplyr", "ggplot2", "MASS", "plyr", "Rdpack"] + "depends": ["MASS", "Rdpack", "dplyr", "ggplot2", "plyr"] }, "SDEFSR": { "name": "SDEFSR", @@ -30593,13 +30905,13 @@ "name": "SDMtune", "version": "1.3.1", "sha256": "0zzra0vig3gyz3b0h66fdlkpl2ii939d7k6p7ym5mzhz1vqdaljz", - "depends": ["cli", "dismo", "gbm", "ggplot2", "jsonlite", "maxnet", "nnet", "randomForest", "Rcpp", "rlang", "rstudioapi", "stringr", "terra", "whisker"] + "depends": ["Rcpp", "cli", "dismo", "gbm", "ggplot2", "jsonlite", "maxnet", "nnet", "randomForest", "rlang", "rstudioapi", "stringr", "terra", "whisker"] }, "SDPDmod": { "name": "SDPDmod", "version": "0.0.5", "sha256": "1f136nb32y3lnnhyri03y8p5akc2c06g9rynx53w702fyi72bgy6", - "depends": ["Matrix", "plm", "RSpectra", "sf", "sp", "spdep"] + "depends": ["Matrix", "RSpectra", "plm", "sf", "sp", "spdep"] }, "SDPrism2D": { "name": "SDPrism2D", @@ -30629,7 +30941,7 @@ "name": "SEA", "version": "2.0.1", "sha256": "03iqvs95v2q252dl62z39i0nwg8n44g1p9ljbmb1nx6zq98fd7bw", - "depends": ["data_table", "doParallel", "foreach", "KScorrect", "MASS", "shiny"] + "depends": ["KScorrect", "MASS", "data_table", "doParallel", "foreach", "shiny"] }, "SEAGLE": { "name": "SEAGLE", @@ -30641,7 +30953,7 @@ "name": "SEAHORS", "version": "1.8.0", "sha256": "172wqna58sfmdaparvy14nva8lsflvsz55ndkd2ficfmp28qqp6n", - "depends": ["dplyr", "DT", "ggplot2", "gridExtra", "htmlwidgets", "MASS", "plotly", "raster", "readxl", "rmarkdown", "shiny", "shinyjs", "shinythemes", "shinyWidgets", "stringr", "viridis"] + "depends": ["DT", "MASS", "dplyr", "ggplot2", "gridExtra", "htmlwidgets", "plotly", "raster", "readxl", "rmarkdown", "shiny", "shinyWidgets", "shinyjs", "shinythemes", "stringr", "viridis"] }, "SEARS": { "name": "SEARS", @@ -30653,7 +30965,7 @@ "name": "SECFISH", "version": "0.1.7", "sha256": "0yd9k6anz9g4psg5kh1bhp0lr1i4y7in1m0mxk4qp14nl1zqy4fy", - "depends": ["ggplot2", "Hmisc", "optimization"] + "depends": ["Hmisc", "ggplot2", "optimization"] }, "SECP": { "name": "SECP", @@ -30665,7 +30977,7 @@ "name": "SEERaBomb", "version": "2019.2", "sha256": "0rlah68jbaw4qbqq5rnlrm6m9ckz7igbsay6iq1yvk4gy24p9bfh", - "depends": ["DBI", "demography", "dplyr", "forcats", "ggplot2", "labelled", "LaF", "mgcv", "openxlsx", "plyr", "purrr", "Rcpp", "readr", "reshape2", "rgl", "RSQLite", "scales", "stringr", "survival", "tibble", "tidyr", "WriteXLS"] + "depends": ["DBI", "LaF", "RSQLite", "Rcpp", "WriteXLS", "demography", "dplyr", "forcats", "ggplot2", "labelled", "mgcv", "openxlsx", "plyr", "purrr", "readr", "reshape2", "rgl", "scales", "stringr", "survival", "tibble", "tidyr"] }, "SEI": { "name": "SEI", @@ -30677,7 +30989,7 @@ "name": "SEIRfansy", "version": "1.1.1", "sha256": "0xnyrsv04n22s71v1wajwpccwk78q27fgry9dhxxzw8a6yd082x8", - "depends": ["arm", "DescTools", "dplyr", "ggplot2", "ggpubr", "knitr", "magrittr", "patchwork", "pbapply", "rlang", "scales"] + "depends": ["DescTools", "arm", "dplyr", "ggplot2", "ggpubr", "knitr", "magrittr", "patchwork", "pbapply", "rlang", "scales"] }, "SEL": { "name": "SEL", @@ -30689,19 +31001,19 @@ "name": "SELF", "version": "0.1.1", "sha256": "1yafjhxwsanr33dqy7w9x61ghldr29s8k6h68idq6nnfb77ghjyx", - "depends": ["bnlearn", "CompareCausalNetworks", "data_table", "Rcpp", "xgboost"] + "depends": ["CompareCausalNetworks", "Rcpp", "bnlearn", "data_table", "xgboost"] }, "SEMID": { "name": "SEMID", "version": "0.4.1", "sha256": "14x2vir17fp9wm9hzsrc1sw0qgavkpfdvcsfnnklhznl0h526xrr", - "depends": ["igraph", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["R_methodsS3", "R_oo", "R_utils", "igraph"] }, "SEMgraph": { "name": "SEMgraph", - "version": "1.2.1", - "sha256": "1ch82mqhmjyk7lz8hxzl17w342bcviyhsja50gm0j99bh6a8gwz7", - "depends": ["aspect", "boot", "corpcor", "dagitty", "flip", "gdata", "ggm", "glasso", "glmnet", "graph", "igraph", "lavaan", "mgcv", "mvtnorm", "pbapply", "protoclust", "RBGL", "Rgraphviz"] + "version": "1.2.2", + "sha256": "08lka7zv3w8m4l855whcjwijqyhv7x45m6bcqaivbw5clxhidmgw", + "depends": ["RBGL", "Rgraphviz", "aspect", "boot", "corpcor", "dagitty", "flip", "gdata", "ggm", "glasso", "glmnet", "graph", "igraph", "lavaan", "mgcv", "mvtnorm", "pbapply", "protoclust"] }, "SEMsens": { "name": "SEMsens", @@ -30731,7 +31043,13 @@ "name": "SEset", "version": "1.0.1", "sha256": "127z85m95xn46s7lk3sdzrs73mi7pa2smx9r80fnl678f2kyz6lm", - "depends": ["combinat", "Matrix", "Rdpack"] + "depends": ["Matrix", "Rdpack", "combinat"] + }, + "SFPL": { + "name": "SFPL", + "version": "1.0.0", + "sha256": "03axwipil1k1dcjc2zsc62a464qqrncyl2z828w7dqkhp2mfyz2s", + "depends": ["gtools", "pracma"] }, "SFS": { "name": "SFS", @@ -30739,6 +31057,12 @@ "sha256": "1pig64pj30yyfzyv97f74gshw4lnklrx0npp4da3absk6anb3iv7", "depends": ["Rcpp", "RcppArmadillo"] }, + "SFSI": { + "name": "SFSI", + "version": "1.4", + "sha256": "1ikw1mksgzbznhraa15ckhrbygidvwjl5h2psvzv81j9547f7zbq", + "depends": ["ggplot2", "igraph", "reshape2", "scales", "stringr", "tensorEVD", "viridis"] + }, "SFtools": { "name": "SFtools", "version": "0.1.0", @@ -30749,7 +31073,7 @@ "name": "SGB", "version": "1.0.1.1", "sha256": "0lhb0rqih154lxzczdk8i613my3zwym9479n3r4h9xym9bjq80lr", - "depends": ["alabama", "Formula", "MASS", "numDeriv"] + "depends": ["Formula", "MASS", "alabama", "numDeriv"] }, "SGDinference": { "name": "SGDinference", @@ -30767,7 +31091,7 @@ "name": "SGP", "version": "2.1-0.0", "sha256": "1msz3ccgmmwwla70gwwichgzjhzym942wa6hw0imr5cgkm4hk0kq", - "depends": ["Cairo", "callr", "colorspace", "crayon", "data_table", "digest", "doParallel", "equate", "foreach", "gridBase", "gtools", "iterators", "jsonlite", "matrixStats", "plotly", "quantreg", "randomNames", "rngtools", "RSQLite", "sn", "svglite", "toOrdinal"] + "depends": ["Cairo", "RSQLite", "callr", "colorspace", "crayon", "data_table", "digest", "doParallel", "equate", "foreach", "gridBase", "gtools", "iterators", "jsonlite", "matrixStats", "plotly", "quantreg", "randomNames", "rngtools", "sn", "svglite", "toOrdinal"] }, "SGPR": { "name": "SGPR", @@ -30777,27 +31101,27 @@ }, "SGPdata": { "name": "SGPdata", - "version": "27.0-0.0", - "sha256": "0d6lwxqp9ajzinfg258gaqr2k537v32f1gfn7565vsdrlp9miki3", + "version": "28.0-0.0", + "sha256": "03x4ihxhwisrq6bwqclxh56n88b7z0b4yfcrfxxfrgc7zqs9adv2", "depends": ["crayon", "data_table"] }, "SHAPforxgboost": { "name": "SHAPforxgboost", "version": "0.1.3", "sha256": "0b3h6py80a0dmb8f8j4h7a7d0k6ld8l0qr24r8pxxy7dbqbyxh5x", - "depends": ["BBmisc", "data_table", "ggExtra", "ggforce", "ggplot2", "ggpubr", "RColorBrewer", "xgboost"] + "depends": ["BBmisc", "RColorBrewer", "data_table", "ggExtra", "ggforce", "ggplot2", "ggpubr", "xgboost"] }, "SHELF": { "name": "SHELF", "version": "1.10.0", "sha256": "0867d66iak8kb4mkbj16k5b5dm58xsk5djm7r1xha3m2f73yalvd", - "depends": ["ggExtra", "ggplot2", "ggridges", "Hmisc", "rmarkdown", "scales", "shiny", "shinyMatrix", "sn", "tidyr"] + "depends": ["Hmisc", "ggExtra", "ggplot2", "ggridges", "rmarkdown", "scales", "shiny", "shinyMatrix", "sn", "tidyr"] }, "SHT": { "name": "SHT", "version": "0.1.8", "sha256": "03mzjm0hx1i8jz7gam19zyr5w6whwk7a3gfid68h5hj8x60p04wx", - "depends": ["flare", "pracma", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "flare", "pracma"] }, "SI": { "name": "SI", @@ -30809,12 +31133,12 @@ "name": "SIAmodules", "version": "0.1.1", "sha256": "1x6a1apscxdrqlh0dnz9slrfiz4vhxx32rp32lfg27sc1awlx6xy", - "depends": ["cli", "difNLR", "dplyr", "DT", "forcats", "ggplot2", "glue", "lme4", "magrittr", "mirt", "mirtCAT", "plotly", "purrr", "rlang", "scales", "shiny", "ShinyItemAnalysis", "shinyjs", "stringr", "tibble", "tidyr", "yaml"] + "depends": ["DT", "ShinyItemAnalysis", "cli", "difNLR", "dplyr", "forcats", "ggplot2", "glue", "lme4", "magrittr", "mirt", "mirtCAT", "plotly", "purrr", "rlang", "scales", "shiny", "shinyjs", "stringr", "tibble", "tidyr", "yaml"] }, "SIAtools": { "name": "SIAtools", - "version": "0.1.0", - "sha256": "07vl7c0fkpxyk970h35prxks1prd6827bvglq2iqy0micmr6g7qr", + "version": "0.1.1", + "sha256": "17gw4qz9k6m7wys9ik37b72x554ig240cb3ppbbihwryy3wzygw3", "depends": ["cli", "desc", "fs", "magrittr", "purrr", "rlang", "shiny", "usethis", "yaml"] }, "SIBER": { @@ -30833,13 +31157,13 @@ "name": "SID", "version": "1.1", "sha256": "0wqbv9mlrcf0kjdd8n43vf7fjlhp2nialaaid5dfjsxnlzbf1sl6", - "depends": ["igraph", "Matrix", "pcalg", "RBGL"] + "depends": ["Matrix", "RBGL", "igraph", "pcalg"] }, "SIDES": { "name": "SIDES", "version": "1.18", "sha256": "12a87kdbdhqqjjs0k99c1fv0mxi0gjhvq71rm9wvx3wkf0s5p5sv", - "depends": ["doParallel", "foreach", "MASS", "memoise", "multicool", "nnet", "survival"] + "depends": ["MASS", "doParallel", "foreach", "memoise", "multicool", "nnet", "survival"] }, "SIGN": { "name": "SIGN", @@ -30853,17 +31177,23 @@ "sha256": "03i78kpp5gnq9v4b8rq6v0ndlsjfj2rr1m9gnl10v7z8j021qw1q", "depends": ["CVXR", "glmnet"] }, + "SILFS": { + "name": "SILFS", + "version": "0.1.0", + "sha256": "0rr27bmmjw2hb6w3d6jw1kpk3y212n652qlglnlpryhp7gcckq26", + "depends": ["Ckmeans_1d_dp", "MASS", "glmnet"] + }, "SILGGM": { "name": "SILGGM", "version": "1.0.0", "sha256": "1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0", - "depends": ["glasso", "MASS", "Rcpp", "reshape"] + "depends": ["MASS", "Rcpp", "glasso", "reshape"] }, "SILM": { "name": "SILM", "version": "1.0.0", "sha256": "1iaivpdx18djfm5dqak0q9kfl1xfrnx3gk5x9a4y53h1d7jhl9p6", - "depends": ["glmnet", "hdi", "scalreg", "SIS"] + "depends": ["SIS", "glmnet", "hdi", "scalreg"] }, "SIMEXBoost": { "name": "SIMEXBoost", @@ -30875,31 +31205,31 @@ "name": "SIMICO", "version": "0.2.0", "sha256": "0inyiv2ccz6amdwy94liln0lfs9f12nwq6l0wcqvj42idyjas4ky", - "depends": ["bindata", "CompQuadForm", "fastGHQuad", "ICSKAT"] + "depends": ["CompQuadForm", "ICSKAT", "bindata", "fastGHQuad"] }, "SIMMS": { "name": "SIMMS", "version": "1.3.2", "sha256": "1pdbgqndnhgyfcwgr5ijnnmn64cwlalwbanb2grkm7h80bpql3lw", - "depends": ["doParallel", "foreach", "glmnet", "MASS", "randomForestSRC", "survival"] + "depends": ["MASS", "doParallel", "foreach", "glmnet", "randomForestSRC", "survival"] }, "SIMPLE_REGRESSION": { "name": "SIMPLE.REGRESSION", - "version": "0.1.6", - "sha256": "06kqmvj8pbfgnlib0d6dzg1bh41l6jgwx6b02lgvc6z3nqnpm08w", - "depends": ["nlme"] + "version": "0.1.9", + "sha256": "0drcf4f1ypg667rkbfd4gcmnijbzx9j9qirvja0w2cqhv48mzj9g", + "depends": ["MASS", "nlme"] }, "SIMle": { "name": "SIMle", "version": "0.1.0", "sha256": "1lwi9dxv93f6fnc3j0lkl7kvf806z5f5s8flxzm2km3j5fl0bp2j", - "depends": ["ggplot2", "Matrix", "plotly", "RCurl", "Sie2nts", "stringr"] + "depends": ["Matrix", "RCurl", "Sie2nts", "ggplot2", "plotly", "stringr"] }, "SIMplyBee": { "name": "SIMplyBee", "version": "0.3.0", "sha256": "0013sdgyq29w9yah1yafkd0vj9sgw5lkhi5g5fcb59w386nlfhm5", - "depends": ["AlphaSimR", "extraDistr", "R6"] + "depends": ["AlphaSimR", "R6", "extraDistr"] }, "SINRELEF_LD": { "name": "SINRELEF.LD", @@ -30911,7 +31241,7 @@ "name": "SIPDIBGE", "version": "0.2.1", "sha256": "1scrr08fpyv2qk8yqccwbvzslxp0cjv3939kkcs3v577l6ywb414", - "depends": ["cli", "COVIDIBGE", "PNADcIBGE", "PNDSIBGE", "png", "PNSIBGE", "purrr", "rstudioapi", "tibble"] + "depends": ["COVIDIBGE", "PNADcIBGE", "PNDSIBGE", "PNSIBGE", "cli", "png", "purrr", "rstudioapi", "tibble"] }, "SIPETool": { "name": "SIPETool", @@ -30923,13 +31253,13 @@ "name": "SIPmg", "version": "1.4.1", "sha256": "1f3jirfnxxbrkala5kk0hkkm8gn2zciva6xy459vc80y058hr7z1", - "depends": ["data_table", "DESeq2", "dplyr", "ggplot2", "ggpubr", "HTSSIP", "lazyeval", "magrittr", "MASS", "phyloseq", "plyr", "purrr", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["DESeq2", "HTSSIP", "MASS", "data_table", "dplyr", "ggplot2", "ggpubr", "lazyeval", "magrittr", "phyloseq", "plyr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "SIRE": { "name": "SIRE", "version": "1.1.0", "sha256": "0f624j087k7krg73bqn2qxdgzq66jyhvzz8n024vz3h4hwagxs5n", - "depends": ["dplyr", "igraph", "magrittr", "MASS", "Matrix", "matrixcalc", "numDeriv", "psych", "Rsolnp", "stringr", "systemfit"] + "depends": ["MASS", "Matrix", "Rsolnp", "dplyr", "igraph", "magrittr", "matrixcalc", "numDeriv", "psych", "stringr", "systemfit"] }, "SIRmcmc": { "name": "SIRmcmc", @@ -30951,9 +31281,9 @@ }, "SISIR": { "name": "SISIR", - "version": "0.2.2", - "sha256": "0lmhwi8cm1gq761wzjmsgmqb6p62asr881yjwvyc4hxm2sybfqyz", - "depends": ["adjclust", "aricode", "Boruta", "CORElearn", "dendextend", "doParallel", "dplyr", "expm", "foreach", "ggplot2", "glmnet", "magrittr", "Matrix", "mixOmics", "purrr", "ranger", "RColorBrewer", "reshape2", "rlang", "RSpectra", "tidyr", "tidyselect"] + "version": "0.2.3", + "sha256": "01kgvk2m7wqn74nnihkqi7kps1fj7s6glx1why36jylllck3vbvb", + "depends": ["Boruta", "CORElearn", "Matrix", "RColorBrewer", "RSpectra", "adjclust", "aricode", "dendextend", "doParallel", "dplyr", "expm", "foreach", "ggplot2", "glmnet", "magrittr", "mixOmics", "purrr", "ranger", "reshape2", "rlang", "tidyr", "tidyselect"] }, "SIT": { "name": "SIT", @@ -30983,7 +31313,7 @@ "name": "SKFCPD", "version": "0.2.4", "sha256": "115afbld15c8av179c023mvhzb9cmwc0mgv2s86vv3ldy6l2s39d", - "depends": ["FastGaSP", "ggplot2", "ggpubr", "Rcpp", "RcppEigen", "reshape2", "rlang"] + "depends": ["FastGaSP", "Rcpp", "RcppEigen", "ggplot2", "ggpubr", "reshape2", "rlang"] }, "SKNN": { "name": "SKNN", @@ -30995,13 +31325,13 @@ "name": "SLBDD", "version": "0.0.4", "sha256": "06v2id6rqdn9gcjmnpixdfxgh7wvqx9xpna6lnciqz974k8lblsb", - "depends": ["cluster", "corpcor", "fGarch", "forecast", "glmnet", "gsarima", "imputeTS", "MASS", "Matrix", "matrixcalc", "MTS", "rnn", "TSclust", "tsoutliers"] + "depends": ["MASS", "MTS", "Matrix", "TSclust", "cluster", "corpcor", "fGarch", "forecast", "glmnet", "gsarima", "imputeTS", "matrixcalc", "rnn", "tsoutliers"] }, "SLCARE": { "name": "SLCARE", - "version": "1.1.0", - "sha256": "0l2r7rqyvrisjdl721n6jbbv8y579l3m3i1c3xsn4r2fnry125yx", - "depends": ["dplyr", "ggplot2", "magrittr", "nnet", "reda", "reReg", "rlang", "tidyr"] + "version": "1.2.0", + "sha256": "0ci04i231dgnknqaw2wwv9q7q6psazd537c2x3330kk6zydgass8", + "depends": ["dplyr", "ggplot2", "magrittr", "nnet", "reReg", "reda", "rlang", "tidyr"] }, "SLDAssay": { "name": "SLDAssay", @@ -31013,7 +31343,7 @@ "name": "SLEMI", "version": "1.0.2", "sha256": "0fpnnzzflgahmiy1hypss215qbmq2wf35ps34r1izhvww5cj8f4r", - "depends": ["caret", "corrplot", "doParallel", "e1071", "foreach", "ggplot2", "gridExtra", "Hmisc", "nnet", "reshape2", "stringr"] + "depends": ["Hmisc", "caret", "corrplot", "doParallel", "e1071", "foreach", "ggplot2", "gridExtra", "nnet", "reshape2", "stringr"] }, "SLFPCA": { "name": "SLFPCA", @@ -31041,9 +31371,9 @@ }, "SLOPE": { "name": "SLOPE", - "version": "0.5.0", - "sha256": "0v176w2zj32j8988xf0d7myfcr0ahh49gckfav4v73z6ilfmbchy", - "depends": ["checkmate", "foreach", "ggplot2", "glmnet", "Matrix", "mice", "Rcpp", "RcppArmadillo"] + "version": "0.5.1", + "sha256": "1fwfk6caj3hhb1nc3msky3faakfkvilxqna8564zki5hnmbjny69", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "foreach", "ggplot2"] }, "SLPresElection": { "name": "SLPresElection", @@ -31061,7 +31391,7 @@ "name": "SLTCA", "version": "0.1.0", "sha256": "0pq87fbi79srgjblv40yyj3w1dzf115kfidp8gi564l8xf0qilqg", - "depends": ["geepack", "Matrix", "mvtnorm", "VGAM"] + "depends": ["Matrix", "VGAM", "geepack", "mvtnorm"] }, "SMARTbayesR": { "name": "SMARTbayesR", @@ -31085,7 +31415,7 @@ "name": "SMDIC", "version": "0.1.5", "sha256": "1dx6k67cbk863l9vvp870syn23l7vwxylgs980mp418nfj3d1s23", - "depends": ["backports", "e1071", "GSVA", "maftools", "MASS", "pheatmap", "pracma", "preprocessCore", "RColorBrewer", "samr", "survival", "survminer"] + "depends": ["GSVA", "MASS", "RColorBrewer", "backports", "e1071", "maftools", "pheatmap", "pracma", "preprocessCore", "samr", "survival", "survminer"] }, "SMFilter": { "name": "SMFilter", @@ -31103,7 +31433,7 @@ "name": "SMITIDvisu", "version": "0.0.9", "sha256": "143zz49rx7106v0a46dn1jssqxp60djf5rycfy38167zz7f9wx3y", - "depends": ["htmlwidgets", "jsonlite", "magrittr", "Rcpp", "yaml"] + "depends": ["Rcpp", "htmlwidgets", "jsonlite", "magrittr", "yaml"] }, "SMLE": { "name": "SMLE", @@ -31139,7 +31469,7 @@ "name": "SMMT", "version": "1.2.0", "sha256": "02mm2f4cg8dbzdmpmdv8pf2jskk5kv0w99qzdjri00zwrcd6ckm9", - "depends": ["curl", "dplyr", "rvest", "tibble", "XML", "xml2"] + "depends": ["XML", "curl", "dplyr", "rvest", "tibble", "xml2"] }, "SMNCensReg": { "name": "SMNCensReg", @@ -31157,7 +31487,7 @@ "name": "SMPracticals", "version": "1.4-3.1", "sha256": "1xplp7ihy9ish7fqhc27bhvij9lk9w9mrs7lpdca38ppi4iiafi2", - "depends": ["ellipse", "MASS", "nlme", "survival"] + "depends": ["MASS", "ellipse", "nlme", "survival"] }, "SMR": { "name": "SMR", @@ -31187,7 +31517,7 @@ "name": "SNFtool", "version": "2.3.1", "sha256": "05hz230aq5wbzhknxzr4iqv3nqjhbpf66n6bp1rc5h2jgz2yfbwq", - "depends": ["alluvial", "ExPosition"] + "depends": ["ExPosition", "alluvial"] }, "SNPannotator": { "name": "SNPannotator", @@ -31205,7 +31535,7 @@ "name": "SNPfiltR", "version": "1.0.1", "sha256": "01bm848v0jvf8v568ls8iglz7cjcikriaa7vpavz1smkkm1bs71d", - "depends": ["adegenet", "cluster", "ggplot2", "ggridges", "gridExtra", "Rtsne", "vcfR"] + "depends": ["Rtsne", "adegenet", "cluster", "ggplot2", "ggridges", "gridExtra", "vcfR"] }, "SNPknock": { "name": "SNPknock", @@ -31229,7 +31559,7 @@ "name": "SNSeg", "version": "1.0.3", "sha256": "0p2a8ilxg17a2idnbiaqlmlpbafadl8w1np4bxzbgkkjs0s0qijc", - "depends": ["mvtnorm", "Rcpp"] + "depends": ["Rcpp", "mvtnorm"] }, "SNSequate": { "name": "SNSequate", @@ -31253,7 +31583,7 @@ "name": "SOAs", "version": "1.4", "sha256": "1a3gwqyhw9fzb06xmyapxw0xyff1arb4sfsg3id7blkgxsmahd75", - "depends": ["combinat", "conf_design", "DoE_base", "FrF2", "igraph", "lhs", "partitions", "sfsmisc"] + "depends": ["DoE_base", "FrF2", "combinat", "conf_design", "igraph", "lhs", "partitions", "sfsmisc"] }, "SOFIA": { "name": "SOFIA", @@ -31271,7 +31601,7 @@ "name": "SOIL", "version": "1.1", "sha256": "0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9", - "depends": ["brglm2", "glmnet", "MASS", "ncvreg"] + "depends": ["MASS", "brglm2", "glmnet", "ncvreg"] }, "SOMEnv": { "name": "SOMEnv", @@ -31285,6 +31615,12 @@ "sha256": "15bwdw3awwqq6d4b8ja8lsvcyr2v37l5jc3ja3df3y0ziazdllpn", "depends": ["ggplot2", "ggwordcloud", "igraph", "interp", "markdown", "metR", "rlang", "scatterplot3d", "shiny"] }, + "SOMnmR": { + "name": "SOMnmR", + "version": "0.3.0", + "sha256": "16vd41x4sazjlqwp5fdxcxs8n8rkgjdg819yrbnjlhp54938laj3", + "depends": ["IntervalSurgeon", "data_table", "dplyr", "ggplot2", "minpack_lm", "pracma", "quadprog", "rlang"] + }, "SOP": { "name": "SOP", "version": "1.0-1", @@ -31313,13 +31649,13 @@ "name": "SP2000", "version": "0.2.0", "sha256": "01wrc7p36js20jv04zhphj2vq7qqfgxmrzic066wij0c0mnh0xn5", - "depends": ["DT", "jsonlite", "pbmcapply", "purrr", "rlist", "tibble", "urltools", "XML", "xml2"] + "depends": ["DT", "XML", "jsonlite", "pbmcapply", "purrr", "rlist", "tibble", "urltools", "xml2"] }, "SPADAR": { "name": "SPADAR", "version": "1.0", "sha256": "0xzhcy5nglwx9j2jkm3i9xj1iw1y9wbf6rwfjyhpiwwq6qn8mn5r", - "depends": ["mapproj", "RCEIM"] + "depends": ["RCEIM", "mapproj"] }, "SPARRAfairness": { "name": "SPARRAfairness", @@ -31331,19 +31667,19 @@ "name": "SPARSEMODr", "version": "1.2.0", "sha256": "0nshy1ppwsik7x1n0xp3wknm7fsl7c6y5523qnr41ijh18j165bq", - "depends": ["data_table", "future", "future_apply", "geosphere", "lubridate", "Rcpp", "tidyverse", "viridis"] + "depends": ["Rcpp", "data_table", "future", "future_apply", "geosphere", "lubridate", "tidyverse", "viridis"] }, "SPARTAAS": { "name": "SPARTAAS", - "version": "1.2.1", - "sha256": "1syk48pz3f9dcz03104k9g8l48fjzx3raz3zzggbpbkdbw7hvc9f", - "depends": ["ade4", "ape", "cluster", "colorspace", "crayon", "dplyr", "explor", "FactoMineR", "fastcluster", "foreign", "fpc", "ggdendro", "ggplot2", "htmltools", "htmlwidgets", "ks", "leaflet", "lmtest", "mapview", "MASS", "nor1mix", "plotly", "rstudioapi", "scales", "scatterD3", "shiny", "shinycssloaders", "shinydashboard", "shinyjqui", "shinyjs", "shinythemes", "shinyWidgets", "sp", "stringr", "tidyr"] + "version": "1.2.4", + "sha256": "0795n9z8z4mr0fc4mrdq8xgnn3jaqcqsdpfq0iyyl7zn3nl3bgca", + "depends": ["FactoMineR", "MASS", "ade4", "ape", "cluster", "colorspace", "dplyr", "explor", "fastcluster", "foreign", "fpc", "ggdendro", "ggplot2", "htmltools", "htmlwidgets", "ks", "leaflet", "lmtest", "nor1mix", "plotly", "rstudioapi", "scales", "scatterD3", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjqui", "shinyjs", "shinythemes", "stringr", "tidyr"] }, "SPAS": { "name": "SPAS", "version": "2024.1.31", "sha256": "06axnkq22jyc208ndvmiyp13vfr9sxg85rsdzdi6mm70rzgwba6c", - "depends": ["MASS", "Matrix", "msm", "numDeriv", "plyr", "RcppEigen", "reshape2", "TMB"] + "depends": ["MASS", "Matrix", "RcppEigen", "TMB", "msm", "numDeriv", "plyr", "reshape2"] }, "SPAtest": { "name": "SPAtest", @@ -31391,7 +31727,7 @@ "name": "SPECK", "version": "1.0.0", "sha256": "0n67gqwd01klk8x3ds5ik11nwiga0138vdw3yhnrj1pp3pnpnq7k", - "depends": ["Ckmeans_1d_dp", "magrittr", "Matrix", "rsvd", "Seurat"] + "depends": ["Ckmeans_1d_dp", "Matrix", "Seurat", "magrittr", "rsvd"] }, "SPEDInstabR": { "name": "SPEDInstabR", @@ -31403,7 +31739,7 @@ "name": "SPEI", "version": "1.8.1", "sha256": "1xn7hdj5h68mvkb81pmwha665c6k57pa7k59bb84zhvxgdnczksn", - "depends": ["checkmate", "ggplot2", "lmom", "lmomco", "lubridate", "reshape", "TLMoments", "zoo"] + "depends": ["TLMoments", "checkmate", "ggplot2", "lmom", "lmomco", "lubridate", "reshape", "zoo"] }, "SPEV": { "name": "SPEV", @@ -31427,7 +31763,7 @@ "name": "SPLICE", "version": "1.1.2", "sha256": "1vzacbgb2z6b7cbcn6l5zjminl8gr5irzva0l8shq7g8cqggrvwm", - "depends": ["lifecycle", "SynthETIC", "zoo"] + "depends": ["SynthETIC", "lifecycle", "zoo"] }, "SPORTSCausal": { "name": "SPORTSCausal", @@ -31463,7 +31799,7 @@ "name": "SPSP", "version": "0.2.0", "sha256": "0gf5cw2fnssl198ccpvnma4bcqi33whl6ihc1s9i2lw6xg4qvb33", - "depends": ["glmnet", "lars", "Matrix", "ncvreg", "Rcpp"] + "depends": ["Matrix", "Rcpp", "glmnet", "lars", "ncvreg"] }, "SPUTNIK": { "name": "SPUTNIK", @@ -31499,19 +31835,19 @@ "name": "SQI", "version": "0.1.0", "sha256": "1mb1vzc8r52zr1rp4dakmsdayv47pqsbissljskl9c0nkhlah1kq", - "depends": ["dplyr", "FactoMineR", "matrixStats", "olsrr", "readxl"] + "depends": ["FactoMineR", "dplyr", "matrixStats", "olsrr", "readxl"] }, "SQL": { "name": "SQL", "version": "0.1.1", "sha256": "1l949crb4fz13yxbr9gag7lfqs9ak3ab3i25g20mjrz6iix99hrd", - "depends": ["arrow", "DBI", "duckdb", "stringr"] + "depends": ["DBI", "arrow", "duckdb", "stringr"] }, "SQLove": { "name": "SQLove", "version": "0.0.4", "sha256": "0k746spnhi07rdw8lbblsxgabqlzr3h368svxhs7987r333wlsyh", - "depends": ["DBI", "readr", "RJDBC"] + "depends": ["DBI", "RJDBC", "readr"] }, "SQMtools": { "name": "SQMtools", @@ -31553,7 +31889,7 @@ "name": "SRTsim", "version": "0.99.6", "sha256": "1436lhpjbciln8xmr9sd7d0akh5kap8a9f0az7209c1zqc46i576", - "depends": ["concaveman", "dashboardthemes", "dplyr", "FNN", "ggplot2", "ggpubr", "magrittr", "MASS", "Matrix", "matrixStats", "Morpho", "pdist", "plotly", "S4Vectors", "sf", "shiny", "shinyBS", "shinydashboard", "sp", "spatstat_geom", "spatstat_random", "viridis"] + "depends": ["FNN", "MASS", "Matrix", "Morpho", "S4Vectors", "concaveman", "dashboardthemes", "dplyr", "ggplot2", "ggpubr", "magrittr", "matrixStats", "pdist", "plotly", "sf", "shiny", "shinyBS", "shinydashboard", "sp", "spatstat_geom", "spatstat_random", "viridis"] }, "SRTtools": { "name": "SRTtools", @@ -31577,25 +31913,25 @@ "name": "SSDforR", "version": "1.5.34", "sha256": "12lrvh9231cix5lkc53cf4fk11sfa89011kj2qddk3lkmcyvcwfz", - "depends": ["Kendall", "MAd", "MASS", "metafor", "modifiedmk", "psych", "SingleCaseES", "TTR"] + "depends": ["Kendall", "MASS", "MAd", "SingleCaseES", "TTR", "metafor", "modifiedmk", "psych"] }, "SSEparser": { "name": "SSEparser", "version": "0.1.0", "sha256": "1qjvrs8cv2m4g2rjcdylwss641z4cchzsdymn0lmmdpfcnfys1vy", - "depends": ["magrittr", "purrr", "R6", "rlang", "stringr"] + "depends": ["R6", "magrittr", "purrr", "rlang", "stringr"] }, "SSGL": { "name": "SSGL", "version": "1.0", "sha256": "1f65sc713bzi6nq7ay9jnz92bxh7lrzj6aj77dczkafac2vgmba2", - "depends": ["grpreg", "MASS", "pracma"] + "depends": ["MASS", "grpreg", "pracma"] }, "SSHAARP": { "name": "SSHAARP", "version": "1.1.0", "sha256": "0x8dinhhfk4q1cck7ms78f4k23430c4wyvlh2qclq0c83acjj4y9", - "depends": ["BIGDAWG", "data_table", "DescTools", "dplyr", "filesstrings", "gmt", "gtools", "stringr"] + "depends": ["BIGDAWG", "DescTools", "data_table", "dplyr", "filesstrings", "gmt", "gtools", "stringr"] }, "SSIMmap": { "name": "SSIMmap", @@ -31613,7 +31949,7 @@ "name": "SSLR", "version": "0.9.3.3", "sha256": "0fv1jqri3gpzcfs429pgx4hjqmjrglb4g7nfqdihd2hjmq9k4sql", - "depends": ["conclust", "dplyr", "foreach", "generics", "magrittr", "parsnip", "plyr", "proxy", "purrr", "RANN", "Rcpp", "RcppArmadillo", "rlang", "RSSL"] + "depends": ["RANN", "RSSL", "Rcpp", "RcppArmadillo", "conclust", "dplyr", "foreach", "generics", "magrittr", "parsnip", "plyr", "proxy", "purrr", "rlang"] }, "SSM": { "name": "SSM", @@ -31623,21 +31959,21 @@ }, "SSN2": { "name": "SSN2", - "version": "0.1.1", - "sha256": "0j3523fc5ilh5z3dmml5fqxgnjykm7qqlfvzb0ay8p60l43aybss", - "depends": ["generics", "Matrix", "RSQLite", "sf", "spmodel", "tibble"] + "version": "0.2.0", + "sha256": "05q6vhpf305jqq9spkiwkyam6l9rjj4vhdvq1lf1a1dmync7i4x7", + "depends": ["Matrix", "RSQLite", "generics", "sf", "spmodel", "tibble", "withr"] }, "SSNbayes": { "name": "SSNbayes", "version": "0.0.3", "sha256": "1smfd7mas19y8n4jpywphck54crxn15lnc8dpi9s5il50icr2hls", - "depends": ["dplyr", "plyr", "rstan", "sf", "SSN2"] + "depends": ["SSN2", "dplyr", "plyr", "rstan", "sf"] }, "SSOSVM": { "name": "SSOSVM", "version": "0.2.1", "sha256": "11wlalpw6yhvv95xr8vvgxgl4jafc2ghzsk5wqyv71ahxarmrlss", - "depends": ["MASS", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "mvtnorm"] }, "SSP": { "name": "SSP", @@ -31655,7 +31991,7 @@ "name": "SSRMST", "version": "0.1.1", "sha256": "15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg", - "depends": ["survival", "survRM2"] + "depends": ["survRM2", "survival"] }, "SSRTcalc": { "name": "SSRTcalc", @@ -31667,7 +32003,7 @@ "name": "SSVS", "version": "2.0.0", "sha256": "002k10b3s4f84jiq7yjazmf7jz02z5l4g9ma0cyrdglbhhn3pbrd", - "depends": ["bayestestR", "BoomSpikeSlab", "checkmate", "ggplot2", "rlang"] + "depends": ["BoomSpikeSlab", "bayestestR", "checkmate", "ggplot2", "rlang"] }, "SSplots": { "name": "SSplots", @@ -31697,7 +32033,7 @@ "name": "STAREG", "version": "1.0.3", "sha256": "1skxwk817p4r7svnfrgv8bmkaz06ndqfxnypp9wdmndrgivrmg54", - "depends": ["qvalue", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "qvalue"] }, "STARTS": { "name": "STARTS", @@ -31715,13 +32051,13 @@ "name": "STAT", "version": "0.1.0", "sha256": "0x0qpnlcb52k3x8jwiljsamx81hdcjagfpapv63z054bvig0jvgv", - "depends": ["corrgram", "dplyr", "Hmisc", "psych", "psycho", "rmarkdown", "rpivotTable", "shiny"] + "depends": ["Hmisc", "corrgram", "dplyr", "psych", "psycho", "rmarkdown", "rpivotTable", "shiny"] }, "STAT2": { "name": "STAT2", "version": "0.1.0", "sha256": "09i6vzp5zmi84kdwafb5cbqvja32mdpj8bnp8gnc2wyqwy3a8cqv", - "depends": ["corrgram", "dplyr", "Hmisc", "psych", "psycho", "rmarkdown", "rpivotTable", "shiny"] + "depends": ["Hmisc", "corrgram", "dplyr", "psych", "psycho", "rmarkdown", "rpivotTable", "shiny"] }, "STB": { "name": "STB", @@ -31733,7 +32069,7 @@ "name": "STEPCAM", "version": "1.2", "sha256": "03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf", - "depends": ["ade4", "ape", "FD", "geometry", "gtools", "MASS", "vcd"] + "depends": ["FD", "MASS", "ade4", "ape", "geometry", "gtools", "vcd"] }, "STFTS": { "name": "STFTS", @@ -31751,7 +32087,7 @@ "name": "STMotif", "version": "2.0.2", "sha256": "04cmghys37abxjkcj6hm4nxq5mjiwy93v8xhl6gacmahjr4fj0dl", - "depends": ["ggplot2", "RColorBrewer", "reshape2", "scales"] + "depends": ["RColorBrewer", "ggplot2", "reshape2", "scales"] }, "STMr": { "name": "STMr", @@ -31763,7 +32099,7 @@ "name": "STOPES", "version": "0.2", "sha256": "0dlr9hasily74wlwb44qadql9qdii326xhdnam1anszsvijzs4dk", - "depends": ["changepoint", "cvTools", "glmnet", "MASS"] + "depends": ["MASS", "changepoint", "cvTools", "glmnet"] }, "STPGA": { "name": "STPGA", @@ -31775,13 +32111,13 @@ "name": "STREAK", "version": "1.0.0", "sha256": "1gi228y3rn187pkr74abiydlkdwaahd9b9nn5dn5433y69kwnkw5", - "depends": ["Ckmeans_1d_dp", "Matrix", "Seurat", "SPECK", "VAM"] + "depends": ["Ckmeans_1d_dp", "Matrix", "SPECK", "Seurat", "VAM"] }, "STRMPS": { "name": "STRMPS", "version": "0.5.8", "sha256": "0vlmhrna0laqzjpbg4sgnscrli3cly2lc5d69n6iqfl213zsfz78", - "depends": ["Biostrings", "dplyr", "IRanges", "purrr", "ShortRead", "stringr", "tibble", "tidyr"] + "depends": ["Biostrings", "IRanges", "ShortRead", "dplyr", "purrr", "stringr", "tibble", "tidyr"] }, "STV": { "name": "STV", @@ -31793,19 +32129,19 @@ "name": "STraTUS", "version": "1.1.2", "sha256": "0n3i7gbycp1f10058h9xlh3yk21w2izdb3xgs793mmh1i1sjy394", - "depends": ["ape", "ggplot2", "ggtree", "gmp", "igraph", "phangorn", "RcppAlgos"] + "depends": ["RcppAlgos", "ape", "ggplot2", "ggtree", "gmp", "igraph", "phangorn"] }, "SUMMER": { "name": "SUMMER", "version": "1.4.0", "sha256": "0x93mppdaah7sznzk1rrw76ia07fnjmb676q1rrya6bzkv5fbf5z", - "depends": ["data_table", "fields", "ggplot2", "ggridges", "haven", "Matrix", "RColorBrewer", "reshape2", "scales", "sf", "shadowtext", "sp", "spdep", "survey", "survival", "terra", "viridis"] + "depends": ["Matrix", "RColorBrewer", "data_table", "fields", "ggplot2", "ggridges", "haven", "reshape2", "scales", "sf", "shadowtext", "sp", "spdep", "survey", "survival", "terra", "viridis"] }, "SUNGEO": { "name": "SUNGEO", "version": "1.3.0", "sha256": "0ydwsrgqknngx7567xwfhwj1jdmi4ip1jxkb5jdy41f7ysy1myd0", - "depends": ["automap", "cartogram", "data_table", "dplyr", "httr", "jsonlite", "measurements", "packcircles", "purrr", "RANN", "raster", "Rcpp", "RCurl", "rlang", "rmapshaper", "sf", "spdep", "stringr", "terra"] + "depends": ["RANN", "RCurl", "Rcpp", "automap", "cartogram", "data_table", "dplyr", "httr", "jsonlite", "measurements", "packcircles", "purrr", "raster", "rlang", "rmapshaper", "sf", "spdep", "stringr", "terra"] }, "SUSY": { "name": "SUSY", @@ -31829,19 +32165,19 @@ "name": "SWIM", "version": "1.0.0", "sha256": "1pfrwxn4rha7a68b82lq18x6acyhjy9d8nn2hdwd9hhf576vkvhg", - "depends": ["ggplot2", "Hmisc", "nleqslv", "plyr", "Rdpack", "reshape2"] + "depends": ["Hmisc", "Rdpack", "ggplot2", "nleqslv", "plyr", "reshape2"] }, "SWMPr": { "name": "SWMPr", - "version": "2.5.0", - "sha256": "1p7gzyzdm3fiam76dwl2sb3drphifakx2mj5jz1v3gp57xyhihiz", - "depends": ["data_table", "dplyr", "ggplot2", "gridExtra", "httr", "lattice", "oce", "openair", "RColorBrewer", "reshape2", "suncalc", "tictoc", "tidyr", "XML", "zoo"] + "version": "2.5.1", + "sha256": "15193hv4hvr46l42qvpi5pd187bjjcmrs7akm13vm3nr6nlvzpkx", + "depends": ["RColorBrewer", "XML", "data_table", "dplyr", "ggplot2", "gridExtra", "httr", "lattice", "oce", "openair", "reshape2", "suncalc", "tictoc", "tidyr", "zoo"] }, "SWMPrExtension": { "name": "SWMPrExtension", "version": "2.2.5.1", "sha256": "107v5fh3h03dk9ma67hj8988hfmswrl9lfijhjv5b4ww73n2v6x7", - "depends": ["broom", "curl", "dplyr", "EnvStats", "flextable", "ggimage", "ggplot2", "ggthemes", "lubridate", "magrittr", "officer", "purrr", "RColorBrewer", "rlang", "scales", "sf", "SWMPr", "tidyr", "tidyselect"] + "depends": ["EnvStats", "RColorBrewer", "SWMPr", "broom", "curl", "dplyr", "flextable", "ggimage", "ggplot2", "ggthemes", "lubridate", "magrittr", "officer", "purrr", "rlang", "scales", "sf", "tidyr", "tidyselect"] }, "SWTools": { "name": "SWTools", @@ -31853,7 +32189,7 @@ "name": "SYNCSA", "version": "1.3.4", "sha256": "0n9za302x638s666xs86zy94qch9wn0rln8xy6x9jymhhq9zn0kj", - "depends": ["FD", "permute", "RcppArmadillo", "vegan"] + "depends": ["FD", "RcppArmadillo", "permute", "vegan"] }, "SafeVote": { "name": "SafeVote", @@ -31873,6 +32209,12 @@ "sha256": "0s8svsgwh79rcwnskz0my2xqasyp370hn7aixqm9m6zqlvf42zc2", "depends": [] }, + "SampleSizeDiagnostics": { + "name": "SampleSizeDiagnostics", + "version": "0.1.0", + "sha256": "1h4scywysya36sc6qvfn5csdghb38wicr96xgwhba289zrd9j2az", + "depends": [] + }, "SampleSizeMeans": { "name": "SampleSizeMeans", "version": "1.2.3", @@ -31895,7 +32237,7 @@ "name": "SamplingStrata", "version": "1.5-4", "sha256": "093x9rfilxhgf75p0rfsvglz0sg3imhdm15azxnjiblamyxbhfjm", - "depends": ["doParallel", "glue", "memoise", "pbapply", "SamplingBigData"] + "depends": ["SamplingBigData", "doParallel", "glue", "memoise", "pbapply"] }, "SanFranBeachWater": { "name": "SanFranBeachWater", @@ -31931,13 +32273,13 @@ "name": "ScatterDensity", "version": "0.0.4", "sha256": "126jvjgfja6vyjadl3a7ahpb8z99hazijai4ymvnr1g1wcnx1z19", - "depends": ["pracma", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "pracma"] }, "SchoolDataIT": { "name": "SchoolDataIT", - "version": "0.1.2", - "sha256": "1mhjlll6vplg7alnrl359bb5gvf5b54f2pf4lpazsv29hqiavhqg", - "depends": ["curl", "dplyr", "ggplot2", "httr", "leafpop", "magrittr", "mapview", "readr", "readxl", "rlang", "rvest", "sf", "stringr", "tidyr", "xml2"] + "version": "0.2.0", + "sha256": "1yi65xzi4h0aviisswrn78zgqzp17y4vvjnfcvphlgyr67nh3g6k", + "depends": ["curl", "dplyr", "ggplot2", "httr", "leafpop", "magrittr", "mapview", "readr", "rlang", "rvest", "sf", "stringr", "tidyr", "xml2"] }, "SciViews": { "name": "SciViews", @@ -31955,7 +32297,7 @@ "name": "ScorePlus", "version": "0.1", "sha256": "07hmrx1k256i4cs605j5bpg6brzypryxlcnjkzqak8cw4f26k24q", - "depends": ["combinat", "igraph", "igraphdata", "limSolve", "RSpectra"] + "depends": ["RSpectra", "combinat", "igraph", "igraphdata", "limSolve"] }, "ScottKnott": { "name": "ScottKnott", @@ -31985,19 +32327,19 @@ "name": "ScriptMapR", "version": "0.0.3", "sha256": "18pd23yqn3ai1yfl149081n42hbh0d57hm71s2lhm1z7a5ccjkmf", - "depends": ["dplyr", "formatR", "RCy3", "stringr"] + "depends": ["RCy3", "dplyr", "formatR", "stringr"] }, "SeBR": { "name": "SeBR", "version": "1.0.0", "sha256": "0xk002y4nim5f3mcfbl3zk484cf2s5mvg1paj2jg4f5v60vr4pwp", - "depends": ["fields", "GpGp", "MASS", "quantreg", "spikeSlabGAM", "statmod"] + "depends": ["GpGp", "MASS", "fields", "quantreg", "spikeSlabGAM", "statmod"] }, "SeaVal": { "name": "SeaVal", "version": "1.2.0", "sha256": "1j4y96pqh6h791hiz07f6c4bhacm8n5v720bkwpkmbkky39yi2bf", - "depends": ["data_table", "ggnewscale", "ggplot2", "ggplotify", "lifecycle", "maps", "ncdf4", "patchwork", "RColorBrewer", "scales", "stringr"] + "depends": ["RColorBrewer", "data_table", "ggnewscale", "ggplot2", "ggplotify", "lifecycle", "maps", "ncdf4", "patchwork", "scales", "stringr"] }, "SearchTrees": { "name": "SearchTrees", @@ -32009,7 +32351,7 @@ "name": "SecDim", "version": "3.2", "sha256": "04l4qpw409dj5i494vmf7vmksis6910599gh259nbyv0pdfw5svr", - "depends": ["geosphere", "RcppArmadillo"] + "depends": ["RcppArmadillo", "geosphere"] }, "SeedCalc": { "name": "SeedCalc", @@ -32027,7 +32369,7 @@ "name": "SeedMatchR", "version": "1.1.1", "sha256": "138chb0z1gyhvl56g3a7zf4nash1v3v5l3qfxiqai2kxvladmz9y", - "depends": ["AnnotationHub", "Biostrings", "cowplot", "dplyr", "GenomeInfoDb", "GenomicFeatures", "ggmsa", "ggplot2", "lifecycle", "msa", "stringr", "testit"] + "depends": ["AnnotationHub", "Biostrings", "GenomeInfoDb", "GenomicFeatures", "cowplot", "dplyr", "ggmsa", "ggplot2", "lifecycle", "msa", "stringr", "testit"] }, "SeedVigorIndex": { "name": "SeedVigorIndex", @@ -32057,13 +32399,13 @@ "name": "Select", "version": "1.4", "sha256": "1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2", - "depends": ["ade4", "FD", "lattice", "latticeExtra", "Rsolnp"] + "depends": ["FD", "Rsolnp", "ade4", "lattice", "latticeExtra"] }, "SelectBoost": { "name": "SelectBoost", "version": "2.2.2", "sha256": "189hdr50sikg6pr9x9amjmgg9z0c95j65bddmifsy7zvjhllzjiy", - "depends": ["abind", "Cascade", "glmnet", "igraph", "lars", "msgps", "Rfast", "spls", "varbvs"] + "depends": ["Cascade", "Rfast", "abind", "glmnet", "igraph", "lars", "msgps", "spls", "varbvs"] }, "SelectionBias": { "name": "SelectionBias", @@ -32081,7 +32423,7 @@ "name": "SemNetCleaner", "version": "1.3.4", "sha256": "1fll6i4bz2z07h23z5m3x8hqw5rkianh0w6v8gnnkjqlrnacpfp9", - "depends": ["easycsv", "editData", "foreign", "miniUI", "R_matlab", "readxl", "rstudioapi", "searcher", "SemNetDictionaries", "shiny", "stringdist", "stringi"] + "depends": ["R_matlab", "SemNetDictionaries", "easycsv", "editData", "foreign", "miniUI", "readxl", "rstudioapi", "searcher", "shiny", "stringdist", "stringi"] }, "SemNetDictionaries": { "name": "SemNetDictionaries", @@ -32093,7 +32435,7 @@ "name": "Semblance", "version": "1.1.0", "sha256": "1kzrg5z3244nx9y37p092wpangni3fxpx04i5fb4dhrmav4rvgab", - "depends": ["DescTools", "fields", "msos", "PerformanceAnalytics"] + "depends": ["DescTools", "PerformanceAnalytics", "fields", "msos"] }, "SemiCompRisks": { "name": "SemiCompRisks", @@ -32111,13 +32453,13 @@ "name": "SemiMarkov", "version": "1.4.6", "sha256": "0nga790kcrvmbrx5asp4062711x0kjsccc246l4syiiw30b769ig", - "depends": ["MASS", "numDeriv", "Rsolnp"] + "depends": ["MASS", "Rsolnp", "numDeriv"] }, "SemiPar": { "name": "SemiPar", "version": "1.0-4.2", "sha256": "0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w", - "depends": ["cluster", "MASS", "nlme"] + "depends": ["MASS", "cluster", "nlme"] }, "SemiPar_depCens": { "name": "SemiPar.depCens", @@ -32141,13 +32483,13 @@ "name": "SenTinMixt", "version": "1.0.0", "sha256": "1yja63087nhb5c0wlql7yynjkhkrjw69amvz4w55xqvp605rh46f", - "depends": ["data_table", "doSNOW", "expint", "foreach", "mclust", "rlist", "snow", "tidyr", "TSdist", "withr", "zipfR"] + "depends": ["TSdist", "data_table", "doSNOW", "expint", "foreach", "mclust", "rlist", "snow", "tidyr", "withr", "zipfR"] }, "SensMap": { "name": "SensMap", "version": "0.7", "sha256": "1aac3mr7jq6fl0r230igdwcmpivpd9by5sx1vbrz3rpircgy28nz", - "depends": ["doBy", "factoextra", "FactoMineR", "fields", "ggdendro", "ggplot2", "glmulti", "lattice", "MCMCpack", "mgcv", "plotly", "reshape2", "shiny"] + "depends": ["FactoMineR", "MCMCpack", "doBy", "factoextra", "fields", "ggdendro", "ggplot2", "glmulti", "lattice", "mgcv", "plotly", "reshape2", "shiny"] }, "SensitivityCaseControl": { "name": "SensitivityCaseControl", @@ -32159,13 +32501,13 @@ "name": "SensoMineR", "version": "1.27", "sha256": "0si7zklv94li8payg4zxcac1a7ivk90q4ckcyak536sqfinihpb3", - "depends": ["AlgDesign", "cluster", "FactoMineR", "ggplot2", "ggrepel", "gtools", "KernSmooth", "reshape2"] + "depends": ["AlgDesign", "FactoMineR", "KernSmooth", "cluster", "ggplot2", "ggrepel", "gtools", "reshape2"] }, "SensusR": { "name": "SensusR", "version": "2.3.1", "sha256": "1x1a8vnpn6h7905wa4lvf7vibkl2dsa4yyg2sg4bbi719lcki2q0", - "depends": ["ggmap", "ggplot2", "jsonlite", "lubridate", "openssl", "plyr", "R_utils"] + "depends": ["R_utils", "ggmap", "ggplot2", "jsonlite", "lubridate", "openssl", "plyr"] }, "SentimentAnalysis": { "name": "SentimentAnalysis", @@ -32189,25 +32531,25 @@ "name": "SeqDetect", "version": "1.0.7", "sha256": "054b5v0jzk9pj9hrxk31kvcdm789lx8gzh70ivskixz57kajmiss", - "depends": ["dplyr", "eventdataR", "igraph", "Rcpp"] + "depends": ["Rcpp", "dplyr", "eventdataR", "igraph"] }, "SeqExpMatch": { "name": "SeqExpMatch", "version": "0.1.0", "sha256": "0i4hsmkapsavhqx99zk9d2qajaqh8kchdf8qy3rbdwgchiiwzybv", - "depends": ["checkmate", "doParallel", "R6"] + "depends": ["R6", "checkmate", "doParallel"] }, "SeqFeatR": { "name": "SeqFeatR", "version": "0.3.1", "sha256": "1dvl65n60j7wl0jdb0myi9hprlr9grq6nf9m68gzxm9sz3h8lpvh", - "depends": ["ape", "Biostrings", "calibrate", "coda", "ggplot2", "phangorn", "plotrix", "plyr", "qvalue", "R2jags", "scales", "tcltk2", "widgetTools"] + "depends": ["Biostrings", "R2jags", "ape", "calibrate", "coda", "ggplot2", "phangorn", "plotrix", "plyr", "qvalue", "scales", "tcltk2", "widgetTools"] }, "SeqKat": { "name": "SeqKat", "version": "0.0.8", "sha256": "09b5zrp41241ha5q8bxll9n12sn11hsbv46g2ld1lqsy2razivr4", - "depends": ["doParallel", "foreach", "Rcpp"] + "depends": ["Rcpp", "doParallel", "foreach"] }, "SeqMADE": { "name": "SeqMADE", @@ -32219,7 +32561,7 @@ "name": "SeqNet", "version": "1.1.3", "sha256": "1ix3c249q758si6670hqa56g1snqqwqdrwshfwajvynl7k2zqzmv", - "depends": ["fitdistrplus", "ggplot2", "igraph", "mvtnorm", "purrr", "Rcpp", "Rdpack", "rlang", "tibble"] + "depends": ["Rcpp", "Rdpack", "fitdistrplus", "ggplot2", "igraph", "mvtnorm", "purrr", "rlang", "tibble"] }, "SequenceSpikeSlab": { "name": "SequenceSpikeSlab", @@ -32243,25 +32585,25 @@ "name": "SetMethods", "version": "4.0", "sha256": "0pzxcqbc7jnsxhv902qw2q9rcqskib11z36d5nav9wny6bj2z658", - "depends": ["admisc", "betareg", "fmsb", "ggplot2", "ggrepel", "QCA", "scatterplot3d", "stargazer"] + "depends": ["QCA", "admisc", "betareg", "fmsb", "ggplot2", "ggrepel", "scatterplot3d", "stargazer"] }, "SetTest": { "name": "SetTest", - "version": "0.2.0", - "sha256": "08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0", + "version": "0.3.0", + "sha256": "12w297xmq76afiwj1h8ygk24rjhhd7a77fj12dsksw20y1g0f30d", "depends": [] }, "Seurat": { "name": "Seurat", "version": "5.1.0", "sha256": "0nad49g13v5zg4rr2099m1cl1qcmmj1a0m09gam5xiccg8yv9kxd", - "depends": ["cluster", "cowplot", "fastDummies", "fitdistrplus", "future", "future_apply", "generics", "ggplot2", "ggrepel", "ggridges", "httr", "ica", "igraph", "irlba", "jsonlite", "KernSmooth", "leiden", "lifecycle", "lmtest", "MASS", "Matrix", "matrixStats", "miniUI", "patchwork", "pbapply", "plotly", "png", "progressr", "purrr", "RANN", "RColorBrewer", "Rcpp", "RcppAnnoy", "RcppEigen", "RcppHNSW", "RcppProgress", "reticulate", "rlang", "ROCR", "RSpectra", "Rtsne", "scales", "scattermore", "sctransform", "SeuratObject", "shiny", "spatstat_explore", "spatstat_geom", "tibble", "uwot"] + "depends": ["KernSmooth", "MASS", "Matrix", "RANN", "RColorBrewer", "ROCR", "RSpectra", "Rcpp", "RcppAnnoy", "RcppEigen", "RcppHNSW", "RcppProgress", "Rtsne", "SeuratObject", "cluster", "cowplot", "fastDummies", "fitdistrplus", "future", "future_apply", "generics", "ggplot2", "ggrepel", "ggridges", "httr", "ica", "igraph", "irlba", "jsonlite", "leiden", "lifecycle", "lmtest", "matrixStats", "miniUI", "patchwork", "pbapply", "plotly", "png", "progressr", "purrr", "reticulate", "rlang", "scales", "scattermore", "sctransform", "shiny", "spatstat_explore", "spatstat_geom", "tibble", "uwot"] }, "SeuratObject": { "name": "SeuratObject", "version": "5.0.2", "sha256": "1kx0icqzjck7vynxj5962sz9zlassia4j32azr9y7ds5yhhhvlyy", - "depends": ["future", "future_apply", "generics", "lifecycle", "Matrix", "progressr", "Rcpp", "RcppEigen", "rlang", "sp", "spam"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "future", "future_apply", "generics", "lifecycle", "progressr", "rlang", "sp", "spam"] }, "ShapDoE": { "name": "ShapDoE", @@ -32281,12 +32623,6 @@ "sha256": "1vlzvfns6grxc2g0d4slsckg6lzzr0k38brncf2akb41jkczbyak", "depends": ["igraph", "landscapemetrics", "raster", "sp", "terra"] }, - "ShapeRotator": { - "name": "ShapeRotator", - "version": "0.1.0", - "sha256": "1pg2m1wh7fbchm8gp3mngfnf5g2rbhvzim1bpzqyvxqpx6ynicsa", - "depends": ["plot3D"] - }, "ShapeSelectForest": { "name": "ShapeSelectForest", "version": "1.7", @@ -32297,19 +32633,19 @@ "name": "ShapleyOutlier", "version": "0.1.1", "sha256": "1qdb872cppq1dh33l75pxw4l7isp8nlsinbipygm989f1sf24xkh", - "depends": ["dplyr", "egg", "forcats", "ggplot2", "gridExtra", "magrittr", "RColorBrewer", "Rdpack", "robustbase", "tibble", "tidyr"] + "depends": ["RColorBrewer", "Rdpack", "dplyr", "egg", "forcats", "ggplot2", "gridExtra", "magrittr", "robustbase", "tibble", "tidyr"] }, "ShapleyValue": { "name": "ShapleyValue", "version": "0.2.0", "sha256": "05ziyvvd81l0lx572in9snndnjdq8y4wkd8bxqs0y979l49yr6fd", - "depends": ["kableExtra", "MASS", "tidyverse"] + "depends": ["MASS", "kableExtra", "tidyverse"] }, "SharkDemography": { "name": "SharkDemography", "version": "1.1.0", "sha256": "188qzbixz44qvi1jqr76hmmamkxn43lc9sayrpsvwi3bhkj9ablw", - "depends": ["doFuture", "doParallel", "dplyr", "foreach", "interp", "iterators", "magrittr", "MASS", "popbio", "readr", "tidyr"] + "depends": ["MASS", "doFuture", "doParallel", "dplyr", "foreach", "interp", "iterators", "magrittr", "popbio", "readr", "tidyr"] }, "SharpeR": { "name": "SharpeR", @@ -32357,13 +32693,13 @@ "name": "ShinyLink", "version": "0.2.2", "sha256": "1idb95hdjllrhzm4fx1lrx3d2palbwjshm6ppjw916p7wg7y7wqn", - "depends": ["config", "DT", "fastLink", "gender", "ggplot2", "ggvenn", "golem", "haven", "htmlwidgets", "jsonlite", "lubridate", "magrittr", "readxl", "shiny", "shinydashboard", "shinydashboardPlus", "shinyWidgets", "tidyr", "tidyselect", "vroom"] + "depends": ["DT", "config", "fastLink", "gender", "ggplot2", "ggvenn", "golem", "haven", "htmlwidgets", "jsonlite", "lubridate", "magrittr", "readxl", "shiny", "shinyWidgets", "shinydashboard", "shinydashboardPlus", "tidyr", "tidyselect", "vroom"] }, "ShinyQuickStarter": { "name": "ShinyQuickStarter", "version": "2.0.1", "sha256": "19k46hwcab33l6dc43dp4hvvr366qh3z2jjw3b79x7f824wampnn", - "depends": ["colourpicker", "data_table", "dplyr", "fs", "ggplot2", "miniUI", "plotly", "reshape2", "shiny", "shinyalert", "shinydashboard", "shinyFiles", "shinyjs", "shinyWidgets", "stringi", "stringr", "styler"] + "depends": ["colourpicker", "data_table", "dplyr", "fs", "ggplot2", "miniUI", "plotly", "reshape2", "shiny", "shinyFiles", "shinyWidgets", "shinyalert", "shinydashboard", "shinyjs", "stringi", "stringr", "styler"] }, "ShinyTester": { "name": "ShinyTester", @@ -32399,7 +32735,7 @@ "name": "SiPhyNetwork", "version": "1.1.0", "sha256": "11p50ysznrrjjsiba1ivsbfpqg3zd5dqmkvj9p574acwhqj3dflp", - "depends": ["ape", "lifecycle", "Rcpp", "rstackdeque"] + "depends": ["Rcpp", "ape", "lifecycle", "rstackdeque"] }, "SiZer": { "name": "SiZer", @@ -32411,13 +32747,13 @@ "name": "Sie2nts", "version": "0.1.0", "sha256": "14s13v5y33kjgd779wrdzy985sp9qg0a0rh5qx66qs9gmff6r663", - "depends": ["ggplot2", "Matrix", "plotly", "RCurl", "stringr"] + "depends": ["Matrix", "RCurl", "ggplot2", "plotly", "stringr"] }, "Sieve": { "name": "Sieve", "version": "2.1", "sha256": "1smsr073zl91jxdrawy12rn2ygs2zhj79npb20c98zs7npp5yrj6", - "depends": ["combinat", "glmnet", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "combinat", "glmnet"] }, "SigOptR": { "name": "SigOptR", @@ -32429,25 +32765,25 @@ "name": "SigTree", "version": "1.10.6", "sha256": "18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w", - "depends": ["ape", "MASS", "phyext2", "phylobase", "phyloseq", "RColorBrewer", "vegan"] + "depends": ["MASS", "RColorBrewer", "ape", "phyext2", "phylobase", "phyloseq", "vegan"] }, "SightabilityModel": { "name": "SightabilityModel", "version": "1.5.5", "sha256": "1fj871q0mav3dffm3sjg4zsci0lm8z74nfgbbrv6jzab155vfrmc", - "depends": ["formula_tools", "Matrix", "msm", "mvtnorm", "plyr", "survey"] + "depends": ["Matrix", "formula_tools", "msm", "mvtnorm", "plyr", "survey"] }, "Signac": { "name": "Signac", "version": "1.13.0", "sha256": "0ahv4j1jbhbclvidyw6h15p6n64zhawamqnrn8s1hf9pchy11d6r", - "depends": ["BiocGenerics", "data_table", "dplyr", "fastmatch", "future", "future_apply", "GenomeInfoDb", "GenomicRanges", "ggplot2", "IRanges", "irlba", "lifecycle", "Matrix", "patchwork", "pbapply", "Rcpp", "RcppRoll", "rlang", "Rsamtools", "S4Vectors", "scales", "SeuratObject", "stringi", "tidyr", "tidyselect", "vctrs"] + "depends": ["BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "Matrix", "Rcpp", "RcppRoll", "Rsamtools", "S4Vectors", "SeuratObject", "data_table", "dplyr", "fastmatch", "future", "future_apply", "ggplot2", "irlba", "lifecycle", "patchwork", "pbapply", "rlang", "scales", "stringi", "tidyr", "tidyselect", "vctrs"] }, "SignacX": { "name": "SignacX", "version": "2.2.5", "sha256": "0b38k3lxca985mqwvbbdczkjnn2x79kga05yw995gb6d20cjh96v", - "depends": ["igraph", "jsonlite", "lme4", "Matrix", "neuralnet", "pbmcapply", "RColorBrewer", "RJSONIO", "Seurat"] + "depends": ["Matrix", "RColorBrewer", "RJSONIO", "Seurat", "igraph", "jsonlite", "lme4", "neuralnet", "pbmcapply"] }, "SignifReg": { "name": "SignifReg", @@ -32459,7 +32795,7 @@ "name": "SillyPutty", "version": "0.4.1", "sha256": "18qc7dwd29zghx9klsslvr2pianbf3av0pvc0wc09781hiv3xksg", - "depends": ["cluster", "oompaBase", "Polychrome", "Thresher"] + "depends": ["Polychrome", "Thresher", "cluster", "oompaBase"] }, "Sim_DiffProc": { "name": "Sim.DiffProc", @@ -32477,7 +32813,7 @@ "name": "SimBIID", "version": "0.2.1", "sha256": "01gkkgxx5x9pkwsmpmf1rg4i0ls7fl6yv6pcg8gscr51bnxsrwpp", - "depends": ["coda", "dplyr", "ggplot2", "mvtnorm", "purrr", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppXPtrUtils", "tibble", "tidyr"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "RcppXPtrUtils", "coda", "dplyr", "ggplot2", "mvtnorm", "purrr", "tibble", "tidyr"] }, "SimComp": { "name": "SimComp", @@ -32501,13 +32837,13 @@ "name": "SimCorrMix", "version": "0.1.1", "sha256": "1mx8xkg1nbh4x4xr6m672zyg00s3lky2sy5mz7dfkw40vz2bwi53", - "depends": ["BB", "ggplot2", "MASS", "Matrix", "mvtnorm", "nleqslv", "SimMultiCorrData", "triangle", "VGAM"] + "depends": ["BB", "MASS", "Matrix", "SimMultiCorrData", "VGAM", "ggplot2", "mvtnorm", "nleqslv", "triangle"] }, "SimDesign": { "name": "SimDesign", - "version": "2.15.1", - "sha256": "045bw9zjwhpfgvcl7vfgszxlb6h6wxp83fjh79rm2spnq96vzwk2", - "depends": ["beepr", "dplyr", "foreach", "future", "future_apply", "pbapply", "progressr", "R_utils", "RPushbullet", "sessioninfo"] + "version": "2.17.1", + "sha256": "0anmnzxxw7mv9kykjf2kmgv6qwxkrg48g91q32r2ia4dw8n17782", + "depends": ["RPushbullet", "R_utils", "beepr", "dplyr", "future", "future_apply", "parallelly", "pbapply", "progressr", "sessioninfo", "snow", "testthat"] }, "SimDissolution": { "name": "SimDissolution", @@ -32525,7 +32861,7 @@ "name": "SimEngine", "version": "1.4.0", "sha256": "0rcggzaz6vjf4vrnl9ashyl2lyn0zydypaj9bjhar5bq652xrwz5", - "depends": ["data_table", "dplyr", "magrittr", "MASS", "pbapply", "rlang"] + "depends": ["MASS", "data_table", "dplyr", "magrittr", "pbapply", "rlang"] }, "SimHaz": { "name": "SimHaz", @@ -32535,9 +32871,9 @@ }, "SimInf": { "name": "SimInf", - "version": "9.7.0", - "sha256": "1pkr4x3qmv1b75b2s38nck08lsj8k81rp3md4biachvw56ym74s9", - "depends": ["digest", "MASS", "Matrix"] + "version": "9.8.1", + "sha256": "1lpx7749ld6h5gdlyrlxwp2zx7g9fxxb6s7r8p2pxpyvgrss2pqr", + "depends": ["MASS", "Matrix", "digest"] }, "SimJoint": { "name": "SimJoint", @@ -32549,25 +32885,25 @@ "name": "SimMultiCorrData", "version": "0.2.2", "sha256": "0brszbqxf40y65xp96c5hp7hhvz3gv0xlg93r5ik8qdh0bn0y1sw", - "depends": ["BB", "GenOrd", "ggplot2", "Matrix", "nleqslv", "psych", "triangle", "VGAM"] + "depends": ["BB", "GenOrd", "Matrix", "VGAM", "ggplot2", "nleqslv", "psych", "triangle"] }, "SimNPH": { "name": "SimNPH", "version": "0.5.5", "sha256": "05qp6cnih319p88vrppwvxh595a7vawkc7508xzmzhvrjbn3p7jn", - "depends": ["car", "dplyr", "miniPCH", "nph", "nphRCT", "purrr", "rlang", "SimDesign", "stringr", "survival", "tibble", "tidyr"] + "depends": ["SimDesign", "car", "dplyr", "miniPCH", "nph", "nphRCT", "purrr", "rlang", "stringr", "survival", "tibble", "tidyr"] }, "SimReg": { "name": "SimReg", "version": "3.4", "sha256": "07wkrfv65mbddbnsv0cbdn7m1ahfk2z11dv6r6ia97vz9yz0k03j", - "depends": ["ontologyIndex", "ontologyPlot", "ontologySimilarity", "Rcpp"] + "depends": ["Rcpp", "ontologyIndex", "ontologyPlot", "ontologySimilarity"] }, "SimSST": { "name": "SimSST", "version": "0.0.5.2", "sha256": "1c3bkcvq4767yabw7ifv3akhlavscgxwx5rp18c23icjd3pk9avx", - "depends": ["dplyr", "gamlss_dist", "MASS"] + "depends": ["MASS", "dplyr", "gamlss_dist"] }, "SimSeq": { "name": "SimSeq", @@ -32591,7 +32927,7 @@ "name": "SimTimeVar", "version": "1.0.0", "sha256": "1x0lkgqwx1vz1gbyvy0hx20n638n30j0dny1iz5vs0cvviq3cdv8", - "depends": ["car", "corpcor", "ICC", "metafor", "miscTools", "mvtnorm", "plyr", "psych"] + "depends": ["ICC", "car", "corpcor", "metafor", "miscTools", "mvtnorm", "plyr", "psych"] }, "SimVitD": { "name": "SimVitD", @@ -32621,7 +32957,7 @@ "name": "SimplyAgree", "version": "0.2.0", "sha256": "10n63rn7kl4k1q7k3jz4f3macmn8y662jy41vdspgdwf0iqvf5in", - "depends": ["boot", "dplyr", "emmeans", "ggplot2", "insight", "jmvcore", "lifecycle", "lme4", "magrittr", "MASS", "Matrix", "nlme", "patchwork", "purrr", "quantreg", "stringr", "tidyr", "tidyselect"] + "depends": ["MASS", "Matrix", "boot", "dplyr", "emmeans", "ggplot2", "insight", "jmvcore", "lifecycle", "lme4", "magrittr", "nlme", "patchwork", "purrr", "quantreg", "stringr", "tidyr", "tidyselect"] }, "SingleCaseES": { "name": "SingleCaseES", @@ -32687,13 +33023,13 @@ "name": "SlidingWindows", "version": "0.2.0", "sha256": "0hvxg4hrk3rb1wxhi71rgamxd8wcwys569137znfs0y8j6yvf0jj", - "depends": ["DCCA", "nonlinearTseries", "PerformanceAnalytics", "TSEntropies"] + "depends": ["DCCA", "PerformanceAnalytics", "TSEntropies", "nonlinearTseries"] }, "SmCCNet": { "name": "SmCCNet", "version": "2.0.3", "sha256": "16kw1nk0y8v2dg4akv5biwznx6a0pv754453r3ymfxw7qjrknyqc", - "depends": ["EnvStats", "furrr", "future", "igraph", "magrittr", "Matrix", "pbapply", "pracma", "pROC", "purrr", "rlist", "spls"] + "depends": ["EnvStats", "Matrix", "furrr", "future", "igraph", "magrittr", "pROC", "pbapply", "pracma", "purrr", "rlist", "spls"] }, "SmallCountRounding": { "name": "SmallCountRounding", @@ -32705,7 +33041,7 @@ "name": "SmartEDA", "version": "0.3.10", "sha256": "05m96kp1ylbxslf9y9n063r807wz3wxf6whqmysb7bgyjpsnbzlb", - "depends": ["data_table", "GGally", "ggplot2", "gridExtra", "ISLR", "qpdf", "rmarkdown", "sampling", "scales"] + "depends": ["GGally", "ISLR", "data_table", "ggplot2", "gridExtra", "qpdf", "rmarkdown", "sampling", "scales"] }, "SmartMeterAnalytics": { "name": "SmartMeterAnalytics", @@ -32717,7 +33053,7 @@ "name": "SmartSVA", "version": "0.1.3", "sha256": "10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np", - "depends": ["isva", "Rcpp", "RcppEigen", "RSpectra", "sva"] + "depends": ["RSpectra", "Rcpp", "RcppEigen", "isva", "sva"] }, "SmarterPoland": { "name": "SmarterPoland", @@ -32725,6 +33061,12 @@ "sha256": "07nag50mzj7a4f5lprvvs6k7mppyzcwvkc3dj8b1il2k06q5ffh5", "depends": ["ggplot2", "htmltools", "httr", "jsonlite", "rjson"] }, + "SmithWilsonYieldCurve": { + "name": "SmithWilsonYieldCurve", + "version": "1.1.1", + "sha256": "0p24ay1y874qi4yvfa6b3xkf0m2gjwl8sl2dp59k0g20v0qzynzb", + "depends": [] + }, "SmoothHazard": { "name": "SmoothHazard", "version": "2024.04.10", @@ -32741,7 +33083,7 @@ "name": "SmoothWin", "version": "3.0.0", "sha256": "0zq2sq0w4rs3hrra24wgbbzv88d1hx6m8q8gmc5h6nbs1172hs66", - "depends": ["nlme", "Rfast"] + "depends": ["Rfast", "nlme"] }, "Snake": { "name": "Snake", @@ -32777,7 +33119,7 @@ "name": "SoftBart", "version": "1.0.1", "sha256": "0s7d2gxh6qnpwzagfrwhacgd7w3hxx3xkxrhk6kqjykpckdwy091", - "depends": ["caret", "glmnet", "MASS", "progress", "Rcpp", "RcppArmadillo", "scales", "truncnorm"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "caret", "glmnet", "progress", "scales", "truncnorm"] }, "SoftClustering": { "name": "SoftClustering", @@ -32867,7 +33209,7 @@ "name": "SortedEffects", "version": "1.7.0", "sha256": "188qlgg3m8f07hbjim65yw3qy6200y0b54imkdqm8mq0f14nmi0f", - "depends": ["boot", "Hmisc", "pbapply", "quantreg", "SparseM"] + "depends": ["Hmisc", "SparseM", "boot", "pbapply", "quantreg"] }, "SoundShape": { "name": "SoundShape", @@ -32885,7 +33227,7 @@ "name": "SoupX", "version": "1.6.2", "sha256": "19g3gqgiqllpafc9ihlm083d47zqiygh4p2dhy54k486gk6jcqlv", - "depends": ["ggplot2", "Matrix", "Seurat"] + "depends": ["Matrix", "Seurat", "ggplot2"] }, "SouthParkRshiny": { "name": "SouthParkRshiny", @@ -32897,7 +33239,7 @@ "name": "SoyNAM", "version": "1.6.2", "sha256": "1ajsk51bd9aajlyv9q6yjmdm9xs9jf07j5m189m00mhl21xpzn0b", - "depends": ["lme4", "NAM", "Rcpp", "RcppEigen", "reshape2"] + "depends": ["NAM", "Rcpp", "RcppEigen", "lme4", "reshape2"] }, "SoyURT": { "name": "SoyURT", @@ -32927,37 +33269,37 @@ "name": "SpTe2M", "version": "1.0.3", "sha256": "1xykmbgwwnvl7c9mf0aam3s55xmq2pxdy5wkkz9nzj1c74m0bxqf", - "depends": ["ggplot2", "glmnet", "knitr", "mapproj", "maps", "MASS", "rmarkdown"] + "depends": ["MASS", "ggplot2", "glmnet", "knitr", "mapproj", "maps", "rmarkdown"] }, "SpaCOAP": { "name": "SpaCOAP", "version": "1.2", "sha256": "1cj5avfsfzlb9jbyckpb2zjqkx9ny1msxcdcrcz7kr5njswyw55a", - "depends": ["irlba", "LaplacesDemon", "MASS", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["LaplacesDemon", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "irlba"] }, "SpaDES": { "name": "SpaDES", "version": "2.0.11", "sha256": "0clanr9cwyjhpjv5wsfhm34rmpf5gjh1hq0pzh6p1yp63wnj13m8", - "depends": ["quickPlot", "reproducible", "SpaDES_core", "SpaDES_tools"] + "depends": ["SpaDES_core", "SpaDES_tools", "quickPlot", "reproducible"] }, "SpaDES_core": { "name": "SpaDES.core", "version": "2.1.0", "sha256": "0avn2fvabwq8hfvpwkvrpmdq9692a8nx3km7343j217y7l4s7qdf", - "depends": ["cli", "data_table", "fs", "igraph", "lobstr", "qs", "quickPlot", "reproducible", "Require", "terra", "whisker"] + "depends": ["Require", "cli", "data_table", "fs", "igraph", "lobstr", "qs", "quickPlot", "reproducible", "terra", "whisker"] }, "SpaDES_tools": { "name": "SpaDES.tools", "version": "2.0.7", "sha256": "1kxjwxjr8ncjygj94wpp8z2q58hrb0fyhnz3ajp1jlgpdz3jripi", - "depends": ["backports", "checkmate", "data_table", "fpCompare", "Rcpp", "reproducible", "terra"] + "depends": ["Rcpp", "backports", "checkmate", "data_table", "fpCompare", "reproducible", "terra"] }, "SpaTopic": { "name": "SpaTopic", "version": "1.1.0", "sha256": "19jyxav7mbhpfi85b99wk6lah81ra81r5vbj4l6xm75fli4g3qzm", - "depends": ["foreach", "iterators", "RANN", "Rcpp", "RcppArmadillo", "RcppProgress", "sf"] + "depends": ["RANN", "Rcpp", "RcppArmadillo", "RcppProgress", "foreach", "iterators", "sf"] }, "SpaceTimeBSS": { "name": "SpaceTimeBSS", @@ -33005,12 +33347,12 @@ "name": "SparseLPM", "version": "1.0", "sha256": "1mpjf7yk2haa8hch315davb6nrhxhy0w2vgw2x4111rn4bskhd8m", - "depends": ["gtools", "Rcpp", "RcppArmadillo", "vegan"] + "depends": ["Rcpp", "RcppArmadillo", "gtools", "vegan"] }, "SparseM": { "name": "SparseM", - "version": "1.83", - "sha256": "0nh9nwp4k0mvvp8rawsxvbl4bk5pgzbpnx2xia3mrzw1y5f5szph", + "version": "1.84-2", + "sha256": "0rc6x466jhalb6baxxhffmmcpi03nndvvighp696rrvrhsxzv015", "depends": [] }, "SparseMDC": { @@ -33023,13 +33365,13 @@ "name": "SparseMSE", "version": "2.0.1", "sha256": "1alpvj0ya3r64wwfdzz2aaxgaf6512glzl65p97606c2fwrm6db7", - "depends": ["lpSolve", "Rcapture"] + "depends": ["Rcapture", "lpSolve"] }, "SparseTSCGM": { "name": "SparseTSCGM", "version": "4.0", "sha256": "01lfb3j907244hgapb85kba7zdmgzhw452gri208qgrjzfv2x9yh", - "depends": ["abind", "glasso", "huge", "longitudinal", "MASS", "mvtnorm", "network"] + "depends": ["MASS", "abind", "glasso", "huge", "longitudinal", "mvtnorm", "network"] }, "SparseVFC": { "name": "SparseVFC", @@ -33043,6 +33385,12 @@ "sha256": "0krcyymvwdcckiji1dlm9pyc2x82k5dfkvglfchv8w5kf6y2qmbh", "depends": ["spatstat", "spatstat_geom", "spatstat_random"] }, + "SpatFD": { + "name": "SpatFD", + "version": "0.0.1", + "sha256": "1v7j0fkd031kfgx2xvkd02kvzn3k5dp6s82jvcm7rdrd18z4hzkv", + "depends": ["MASS", "dplyr", "fda", "fda_usc", "geoR", "ggplot2", "gstat", "plotly", "proxy", "reshape", "sf", "sp", "tidyr"] + }, "SpatGC": { "name": "SpatGC", "version": "0.1.0", @@ -33059,13 +33407,13 @@ "name": "SpatMCA", "version": "1.0.4", "sha256": "051c6mdij04n7xc256qx0119gsg337w2xly3ykiy47nrd3svdvc3", - "depends": ["ggplot2", "MASS", "Rcpp", "RcppArmadillo", "RcppParallel", "scales"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2", "scales"] }, "SpatPCA": { "name": "SpatPCA", "version": "1.3.5", "sha256": "1lx429glr6273ssy1in192jx4iynqidkfmj9iibwiij3fk9y0sa5", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2"] }, "SpatialAcc": { "name": "SpatialAcc", @@ -33077,13 +33425,13 @@ "name": "SpatialBSS", "version": "0.14-0", "sha256": "0z8k4wd5rlx3bmp4zmfvblkf4nrkkqqfcpv5wzncyhi2ffgnybvm", - "depends": ["distances", "JADE", "Rcpp", "RcppArmadillo", "robustbase", "sp", "SpatialNP"] + "depends": ["JADE", "Rcpp", "RcppArmadillo", "SpatialNP", "distances", "robustbase", "sp"] }, "SpatialDDLS": { "name": "SpatialDDLS", "version": "1.0.2", "sha256": "1wnyy7wi7bqlm2wjmjw18b7fxyi0ngfry4rzdb4q0fl6x0lkl0hj", - "depends": ["dplyr", "FNN", "ggplot2", "ggpubr", "grr", "gtools", "keras", "Matrix", "pbapply", "reshape2", "reticulate", "rlang", "S4Vectors", "scran", "scuttle", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "tensorflow", "zinbwave"] + "depends": ["FNN", "Matrix", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "ggpubr", "grr", "gtools", "keras", "pbapply", "reshape2", "reticulate", "rlang", "scran", "scuttle", "tensorflow", "zinbwave"] }, "SpatialEpi": { "name": "SpatialEpi", @@ -33101,7 +33449,7 @@ "name": "SpatialGEV", "version": "1.0.1", "sha256": "1wk55vllcsqclzb9cb81pf28gkwxpql8kycyxry6b2ic6c32xgp4", - "depends": ["evd", "Matrix", "mvtnorm", "RcppEigen", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "evd", "mvtnorm"] }, "SpatialGraph": { "name": "SpatialGraph", @@ -33179,13 +33527,13 @@ "name": "SpatialVS", "version": "1.1", "sha256": "1xghfiz9wmmx11ssms7zjy3ggkjmc6kkbdwp3v5wjwpwapafzdk3", - "depends": ["fields", "MASS", "nlme"] + "depends": ["MASS", "fields", "nlme"] }, "SpatialVx": { "name": "SpatialVx", "version": "1.0-2", "sha256": "108mpxpk03gmak69fkd7snhls11hh31fwmva9kqh71rh5g3a47fw", - "depends": ["boot", "CircStats", "distillery", "fastcluster", "fields", "maps", "smatr", "smoothie", "spatstat", "spatstat_geom", "spatstat_linnet", "spatstat_model", "turboEM", "waveslim"] + "depends": ["CircStats", "boot", "distillery", "fastcluster", "fields", "maps", "smatr", "smoothie", "spatstat", "spatstat_geom", "spatstat_linnet", "spatstat_model", "turboEM", "waveslim"] }, "SpatialfdaR": { "name": "SpatialfdaR", @@ -33227,7 +33575,7 @@ "name": "SpectralClMixed", "version": "1.0.1", "sha256": "10nx03kr35irvvink8kfx6gbv90wnlsx514r7921hrjvcjiqn82s", - "depends": ["cluster", "GGally", "ggplot2", "RSpectra"] + "depends": ["GGally", "RSpectra", "cluster", "ggplot2"] }, "SpectralMap": { "name": "SpectralMap", @@ -33237,15 +33585,15 @@ }, "Spectran": { "name": "Spectran", - "version": "1.0.3", - "sha256": "1ylw4klxvklrgpanp4lz4q6kvrg0n51xrnxz0nw1s782ag1c5ndg", - "depends": ["chromote", "colorSpec", "cowplot", "dplyr", "gghighlight", "ggplot2", "ggrepel", "ggridges", "ggtext", "gt", "htmltools", "magrittr", "openxlsx", "pagedown", "patchwork", "png", "purrr", "readr", "rlang", "scales", "shiny", "shinyalert", "shinydashboard", "shinyFeedback", "shinyjs", "shinyWidgets", "spacesXYZ", "spsComps", "stringr", "tibble", "tidyr", "tidyselect", "waiter", "webshot2", "withr"] + "version": "1.0.6", + "sha256": "03nqfsg0hia8v1i7npzxjin3zm4x7sihk389h7cky46vfd95g627", + "depends": ["chromote", "colorSpec", "cowplot", "dplyr", "gghighlight", "ggplot2", "ggrepel", "ggridges", "ggtext", "gt", "htmltools", "magrittr", "openxlsx", "pagedown", "patchwork", "png", "purrr", "readr", "rlang", "scales", "shiny", "shinyFeedback", "shinyWidgets", "shinyalert", "shinydashboard", "shinyjs", "spacesXYZ", "spsComps", "stringr", "tibble", "tidyr", "tidyselect", "waiter", "webshot2", "withr"] }, "Spectrum": { "name": "Spectrum", "version": "1.1", "sha256": "0n38d360azkck6vvhr771zsh0gbvd9qsf9ygg5r18vhz0pb1xcfw", - "depends": ["ClusterR", "diptest", "ggplot2", "Rfast"] + "depends": ["ClusterR", "Rfast", "diptest", "ggplot2"] }, "SphereOptimize": { "name": "SphereOptimize", @@ -33257,13 +33605,13 @@ "name": "SphericalCubature", "version": "1.5", "sha256": "03j9f9v3zrykrd4lc74i19s3xyc0z3l2kg3056qg591sxw64h7vh", - "depends": ["abind", "cubature", "mvmesh", "SimplicialCubature"] + "depends": ["SimplicialCubature", "abind", "cubature", "mvmesh"] }, "SpiceFP": { "name": "SpiceFP", "version": "0.1.2", "sha256": "1vhsi9g925jc95589wp3cjlj8psvggkf1cws2awy94zi0z6lkiri", - "depends": ["doParallel", "foreach", "genlasso", "Matrix", "purrr", "stringr", "tidyr"] + "depends": ["Matrix", "doParallel", "foreach", "genlasso", "purrr", "stringr", "tidyr"] }, "Spillover": { "name": "Spillover", @@ -33287,7 +33635,7 @@ "name": "SplitKnockoff", "version": "1.2", "sha256": "1ywh86gkkcc2dddqfgs5w8w9wyjfqmvcr31jga41ddvj5rb8zkhx", - "depends": ["ggplot2", "glmnet", "latex2exp", "MASS", "Matrix", "mvtnorm", "RSpectra"] + "depends": ["MASS", "Matrix", "RSpectra", "ggplot2", "glmnet", "latex2exp", "mvtnorm"] }, "SplitReg": { "name": "SplitReg", @@ -33323,7 +33671,7 @@ "name": "SqueakR", "version": "1.3.0", "sha256": "09l6dj1xq2zxxy6jnh1dl4rlcbx06fvf0jp2nypv3497dn97jsrh", - "depends": ["dplyr", "ggcorrplot", "ggeasy", "gghighlight", "ggplot2", "ggpubr", "googlesheets4", "MASS", "plotly", "RColorBrewer", "readxl", "report", "rlist", "rstatix", "shiny", "shinydashboard"] + "depends": ["MASS", "RColorBrewer", "dplyr", "ggcorrplot", "ggeasy", "gghighlight", "ggplot2", "ggpubr", "googlesheets4", "plotly", "readxl", "report", "rlist", "rstatix", "shiny", "shinydashboard"] }, "Sshaped": { "name": "Sshaped", @@ -33347,7 +33695,7 @@ "name": "StMoMo", "version": "0.4.1", "sha256": "1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44", - "depends": ["fanplot", "fields", "forecast", "gnm", "MASS", "RColorBrewer", "reshape2", "rootSolve"] + "depends": ["MASS", "RColorBrewer", "fanplot", "fields", "forecast", "gnm", "reshape2", "rootSolve"] }, "StMoSim": { "name": "StMoSim", @@ -33359,25 +33707,25 @@ "name": "StReg", "version": "1.1", "sha256": "0cwrizyk4l82alfwijpljwhcjhgcimrf1vv8wsz7azwwiqzb0cns", - "depends": ["ADGofTest", "matlab", "MCMCpack", "numDeriv", "tseries"] + "depends": ["ADGofTest", "MCMCpack", "matlab", "numDeriv", "tseries"] }, "StabilizedRegression": { "name": "StabilizedRegression", "version": "1.1", "sha256": "02snfdx34k086craacfss1rnhldd81pdql4rf02w96jb1xadrq87", - "depends": ["corpcor", "ggplot2", "ggrepel", "glmnet", "MASS", "R6"] + "depends": ["MASS", "R6", "corpcor", "ggplot2", "ggrepel", "glmnet"] }, "StableEstim": { "name": "StableEstim", "version": "2.2", "sha256": "0z8ia3zqkidnpg2zl055msc0dmhbsq73h8c43y0vfmhdzqszcx9d", - "depends": ["fBasics", "MASS", "Matrix", "numDeriv", "Rdpack", "stabledist", "testthat", "xtable"] + "depends": ["MASS", "Matrix", "Rdpack", "fBasics", "numDeriv", "stabledist", "testthat", "xtable"] }, "StackImpute": { "name": "StackImpute", "version": "0.1.0", "sha256": "07b83bql9ch3arxzv94mllb61d4sv20lvpixlpzi7k8cjdddqizd", - "depends": ["boot", "dplyr", "magrittr", "MASS", "mice", "sandwich", "zoo"] + "depends": ["MASS", "boot", "dplyr", "magrittr", "mice", "sandwich", "zoo"] }, "StakeholderAnalysis": { "name": "StakeholderAnalysis", @@ -33387,15 +33735,15 @@ }, "StanHeaders": { "name": "StanHeaders", - "version": "2.32.9", - "sha256": "0cqb5q9pi02vahr4fif07p4r3p2sik953a9i78z1j00j9srzxc17", + "version": "2.32.10", + "sha256": "10l523sckx3jis5x1zw99iqy9hihjmngmcjq484bgin4gn6mn4n3", "depends": ["RcppEigen", "RcppParallel"] }, "StanMoMo": { "name": "StanMoMo", "version": "1.2.0", "sha256": "0hdh5c5zigmqs3v3ryk1h91w1a2mlqqjwbq51528w159frnd9mrl", - "depends": ["BH", "bridgesampling", "dplyr", "ggplot2", "httr", "latex2exp", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr", "tidyselect", "tidyverse"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bridgesampling", "dplyr", "ggplot2", "httr", "latex2exp", "loo", "rstan", "rstantools", "tibble", "tidyr", "tidyselect", "tidyverse"] }, "Stat2Data": { "name": "Stat2Data", @@ -33407,7 +33755,7 @@ "name": "StatDA", "version": "1.7.11", "sha256": "0jp0qd96z2z2w7lqkyy0csz45fk0774wjf57idqbla3n21jbn4q9", - "depends": ["cluster", "e1071", "geoR", "MASS", "MBA", "mgcv", "rgl", "robustbase", "sgeostat", "sp", "xtable"] + "depends": ["MASS", "MBA", "cluster", "e1071", "geoR", "mgcv", "rgl", "robustbase", "sgeostat", "sp", "xtable"] }, "StatDataML": { "name": "StatDataML", @@ -33449,7 +33797,7 @@ "name": "Statsomat", "version": "1.1.0", "sha256": "1lfgbbf1pcfbih5nfb6rbiq2h0hlxg1fzmcf4330yc48r998q4x6", - "depends": ["car", "corrplot", "data_table", "DDoutlier", "energy", "ggplot2", "gridExtra", "kableExtra", "knitr", "readr", "reshape2", "rmarkdown", "shiny", "shinydisconnect"] + "depends": ["DDoutlier", "car", "corrplot", "data_table", "energy", "ggplot2", "gridExtra", "kableExtra", "knitr", "readr", "reshape2", "rmarkdown", "shiny", "shinydisconnect"] }, "SteinIV": { "name": "SteinIV", @@ -33467,13 +33815,13 @@ "name": "StempCens", "version": "1.1.0", "sha256": "0jphyikfggx0yj5f5k3fykf3fdv9msppymzpyin1m7xfmfi5cwia", - "depends": ["distances", "ggplot2", "MCMCglmm", "mvtnorm", "Rcpp", "RcppArmadillo", "Rdpack", "tmvtnorm"] + "depends": ["MCMCglmm", "Rcpp", "RcppArmadillo", "Rdpack", "distances", "ggplot2", "mvtnorm", "tmvtnorm"] }, "StepBeta": { "name": "StepBeta", "version": "2.1.0", "sha256": "1wr0f4c64hkhq8kjv6vf8laz5pmlyc0ajgd8007q8jris4jydzs6", - "depends": ["aod", "betareg", "combinat", "glue", "MASS"] + "depends": ["MASS", "aod", "betareg", "combinat", "glue"] }, "StepGWR": { "name": "StepGWR", @@ -33483,9 +33831,9 @@ }, "StepReg": { "name": "StepReg", - "version": "1.5.1", - "sha256": "0a7ywq6sfvny4mnknr15vqi2466vmv00qh6hwzdbr0lk873gq000", - "depends": ["cowplot", "dplyr", "DT", "flextable", "ggcorrplot", "ggplot2", "ggrepel", "MASS", "purrr", "rmarkdown", "shiny", "shinycssloaders", "shinyjs", "shinythemes", "stringr", "summarytools", "survival", "tidyr"] + "version": "1.5.2", + "sha256": "1v7inw48dg5mhhlmqvlj7s97w93sjha0djgrl1ninhgp08fl2njh", + "depends": ["DT", "MASS", "cowplot", "dplyr", "flextable", "ggcorrplot", "ggplot2", "ggrepel", "purrr", "rmarkdown", "shiny", "shinycssloaders", "shinyjs", "shinythemes", "stringr", "summarytools", "survival", "tidyr"] }, "StepSignalMargiLike": { "name": "StepSignalMargiLike", @@ -33497,7 +33845,7 @@ "name": "SteppedPower", "version": "0.3.5", "sha256": "0dxl88gfwi6wb9k4qmqhb9hqgvjpzbvwfpiqadzjwg1h6yg487y5", - "depends": ["Matrix", "plotly", "Rfast"] + "depends": ["Matrix", "Rfast", "plotly"] }, "StepwiseTest": { "name": "StepwiseTest", @@ -33509,19 +33857,19 @@ "name": "StereoMorph", "version": "1.6.7", "sha256": "0qrbl86ba83j4r6j2phap5n6ryi729gbypn95h0vbgrv752nayqp", - "depends": ["bezier", "jpeg", "MASS", "png", "Rcpp", "rjson", "shiny", "svgViewR", "tiff"] + "depends": ["MASS", "Rcpp", "bezier", "jpeg", "png", "rjson", "shiny", "svgViewR", "tiff"] }, "SticsRFiles": { "name": "SticsRFiles", - "version": "1.3.0", - "sha256": "0ldc0rl5www8bz9qc80198h0yiz10kqr9zmlhd7b510bhms0i1wp", - "depends": ["cli", "crayon", "curl", "data_table", "dplyr", "lifecycle", "lubridate", "rlang", "rstudioapi", "stringr", "tibble", "tidyr", "tidyselect", "XML", "xml2", "xslt"] + "version": "1.4.0", + "sha256": "1afn65z2pz99k3a1fq8w9jjy05bvsdy7p8f829iap1jaahnbz14m", + "depends": ["XML", "cli", "crayon", "curl", "data_table", "dplyr", "lifecycle", "lubridate", "rlang", "rstudioapi", "stringr", "tibble", "tidyr", "tidyselect", "xml2", "xslt"] }, "StochBlock": { "name": "StochBlock", "version": "0.1.2", "sha256": "0g0l36imgw3bvqj5g45abwicswcyqprzbkas9pzgha8dsc5s12w3", - "depends": ["blockmodeling", "doParallel", "doRNG", "foreach", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "blockmodeling", "doParallel", "doRNG", "foreach"] }, "StockDistFit": { "name": "StockDistFit", @@ -33537,9 +33885,9 @@ }, "StormR": { "name": "StormR", - "version": "0.1.1", - "sha256": "02pxdalkls5qyhms0micjx3w4vvqisv4rc4h7dmyszmacki4kn49", - "depends": ["maps", "ncdf4", "rworldmap", "sf", "stringr", "terra", "zoo"] + "version": "0.2.1", + "sha256": "0b425783y36lqlydxmm95lwcxb6xf893sfpa9wjfn976bqa6kpvv", + "depends": ["leaflet", "maps", "ncdf4", "rworldmap", "sf", "stringr", "terra", "zoo"] }, "StrainRanking": { "name": "StrainRanking", @@ -33563,7 +33911,7 @@ "name": "StrathE2E2", "version": "3.3.0", "sha256": "10y6bagqg1h57c8g7m837qidrf7wdf8r0jcgqwrcgkr1kbxywfg9", - "depends": ["deSolve", "NetIndices"] + "depends": ["NetIndices", "deSolve"] }, "StratifiedBalancing": { "name": "StratifiedBalancing", @@ -33587,7 +33935,7 @@ "name": "StratigrapheR", "version": "1.3.1", "sha256": "10cyv9cddi6lsy1ah3dhvf93gd5mal4frcdwy2zqq50apmmrx5l9", - "depends": ["diagram", "dplyr", "reshape", "shiny", "stringr", "XML"] + "depends": ["XML", "diagram", "dplyr", "reshape", "shiny", "stringr"] }, "StreamMetabolism": { "name": "StreamMetabolism", @@ -33611,13 +33959,13 @@ "name": "StroupGLMM", "version": "0.1.0", "sha256": "1w0xizdmwqflfhqwygyq7fw5ci7pdzmr8dfv3j0g3ljbj84kndzd", - "depends": ["aod", "broom", "car", "ggplot2", "lme4", "lmerTest", "lsmeans", "MASS", "mutoss", "nlme", "pbkrtest", "phia", "survey"] + "depends": ["MASS", "aod", "broom", "car", "ggplot2", "lme4", "lmerTest", "lsmeans", "mutoss", "nlme", "pbkrtest", "phia", "survey"] }, "StrucDiv": { "name": "StrucDiv", "version": "0.2.1", "sha256": "1mzkcij7mrmjj5ccmy0l3xbb75w0bi7vc2cxap3qkycqm1ajk1dr", - "depends": ["doParallel", "foreach", "glue", "raster", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "doParallel", "foreach", "glue", "raster"] }, "StructuralDecompose": { "name": "StructuralDecompose", @@ -33631,6 +33979,12 @@ "sha256": "1pj3inznw6flvmk22dzjcfjnwjhx7r98ngckz0axf6ipp3hb85jn", "depends": ["MASS", "matrixcalc"] }, + "StuteTest": { + "name": "StuteTest", + "version": "1.0.2", + "sha256": "1gkhs3f3pa96a80pipndlxbrwfn9x1l6xzkqmbd6781d90nnk939", + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "plm", "rnames"] + }, "SuRF_vs": { "name": "SuRF.vs", "version": "1.1.0.1", @@ -33659,13 +34013,13 @@ "name": "SubgrpID", "version": "0.12", "sha256": "0x25n5gm1fl5s157g5a7jszy1rj16151r0jpf61vvsw0c9c58707", - "depends": ["ggplot2", "glmnet", "MASS", "Matrix", "rpart", "survival"] + "depends": ["MASS", "Matrix", "ggplot2", "glmnet", "rpart", "survival"] }, "SubpathwayLNCE": { "name": "SubpathwayLNCE", "version": "1.0", "sha256": "051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl", - "depends": ["BiasedUrn", "graph", "igraph", "RBGL"] + "depends": ["BiasedUrn", "RBGL", "graph", "igraph"] }, "SubtypeDrug": { "name": "SubtypeDrug", @@ -33679,6 +34033,12 @@ "sha256": "1rh792x7dyfnhnw6g0f6hb5wqw58j6j11k9xib11ba256qrnvwgc", "depends": [] }, + "SumcaVer1": { + "name": "SumcaVer1", + "version": "0.1.0", + "sha256": "0czswr99s0i2q942yld0qqyhaxyxjv5wa8lqv8nk59y9phwss904", + "depends": ["lme4", "psych"] + }, "SummaryLasso": { "name": "SummaryLasso", "version": "1.2.1", @@ -33713,7 +34073,7 @@ "name": "SuperGauss", "version": "2.0.3", "sha256": "174gicpk2jwbzg39m44sxp7506cja9cnn95r287sq7049lrj302a", - "depends": ["fftw", "R6", "Rcpp", "RcppEigen"] + "depends": ["R6", "Rcpp", "RcppEigen", "fftw"] }, "SuperLearner": { "name": "SuperLearner", @@ -33725,19 +34085,19 @@ "name": "SuperRanker", "version": "1.2.1", "sha256": "02yvx1lg2drhb111jcq90hq0vnycwp3mssclvazgcfyw9z7rnzwg", - "depends": ["prodlim", "Rcpp"] + "depends": ["Rcpp", "prodlim"] }, "SuperpixelImageSegmentation": { "name": "SuperpixelImageSegmentation", "version": "1.0.5", "sha256": "01j8p1vfnswy41b7nzmwml4aq8s00xwdk3zjcc1b6n9bqv0cgnaz", - "depends": ["ClusterR", "lattice", "OpenImageR", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["ClusterR", "OpenImageR", "R6", "Rcpp", "RcppArmadillo", "lattice"] }, "Superpower": { "name": "Superpower", "version": "0.2.0", "sha256": "0bv2jx3hadp5d9c3q790in3m728c8jc1nkp9wqvzcdip1d29hyin", - "depends": ["afex", "dplyr", "emmeans", "ggplot2", "gridExtra", "magrittr", "MASS", "mvtnorm", "reshape2", "tidyr", "tidyselect"] + "depends": ["MASS", "afex", "dplyr", "emmeans", "ggplot2", "gridExtra", "magrittr", "mvtnorm", "reshape2", "tidyr", "tidyselect"] }, "SuppDists": { "name": "SuppDists", @@ -33755,13 +34115,13 @@ "name": "Surrogate", "version": "3.3.0", "sha256": "1r4i12f6kmbszrm8v17gp2396ybwv913ngr3mnhqmvsl91fnpwi6", - "depends": ["dplyr", "extraDistr", "flexsurv", "ks", "lattice", "latticeExtra", "lme4", "logistf", "MASS", "maxLik", "MBESS", "msm", "nlme", "numDeriv", "optimx", "pbapply", "purrr", "rms", "rvinecopulib", "survival", "tibble", "tidyr"] + "depends": ["MASS", "MBESS", "dplyr", "extraDistr", "flexsurv", "ks", "lattice", "latticeExtra", "lme4", "logistf", "maxLik", "msm", "nlme", "numDeriv", "optimx", "pbapply", "purrr", "rms", "rvinecopulib", "survival", "tibble", "tidyr"] }, "SurrogateBMA": { "name": "SurrogateBMA", "version": "1.0", "sha256": "19q63rdrm4y03xmjmjqvsq8s1fx48jalxshzrdyzms9dacbshr0z", - "depends": ["MCMCpack", "mvtnorm", "Rcpp", "RcppEigen", "RcppNumerical", "Rsurrogate"] + "depends": ["MCMCpack", "Rcpp", "RcppEigen", "RcppNumerical", "Rsurrogate", "mvtnorm"] }, "SurrogateOutcome": { "name": "SurrogateOutcome", @@ -33803,7 +34163,7 @@ "name": "SurvDisc", "version": "0.1.1", "sha256": "0ajvnm0a4krbm0m584bg58hd7dzl0f2rz5as1zsajx8agywb5qmv", - "depends": ["cubature", "MASS", "mvtnorm", "nlme", "simex", "survival"] + "depends": ["MASS", "cubature", "mvtnorm", "nlme", "simex", "survival"] }, "SurvEval": { "name": "SurvEval", @@ -33815,7 +34175,7 @@ "name": "SurvHiDim", "version": "0.1.1", "sha256": "1kix00zfrbx11pwx2dfag8vz5nvf8siw2kbxi8g4fb7xib9wh2na", - "depends": ["factoextra", "glmnet", "igraph", "Rdpack", "readr", "survival", "tidyverse", "useful"] + "depends": ["Rdpack", "factoextra", "glmnet", "igraph", "readr", "survival", "tidyverse", "useful"] }, "SurvLong": { "name": "SurvLong", @@ -33845,7 +34205,7 @@ "name": "SurvSparse", "version": "0.1", "sha256": "14v0319w2k6b5cmpfrcxc2h3558lrpf101mhbpkqy0k4ahsb0sax", - "depends": ["dplyr", "foreach", "gaussquad", "MASS", "nleqslv", "nloptr", "purrr", "tibble", "tidyr"] + "depends": ["MASS", "dplyr", "foreach", "gaussquad", "nleqslv", "nloptr", "purrr", "tibble", "tidyr"] }, "SurvTrunc": { "name": "SurvTrunc", @@ -33855,8 +34215,8 @@ }, "SurveyCC": { "name": "SurveyCC", - "version": "0.1.1", - "sha256": "1jhgc6alrpib0qhnh2l9zp9nvy8vfgi2y4dy26vh92rqhdym19ss", + "version": "0.2.1", + "sha256": "04p0g3dffk4khb2f2i9zzcqk8y1d13vyaf2vbn37zpc1c4zd9pvn", "depends": ["candisc", "survey"] }, "SurveyDefense": { @@ -33869,13 +34229,13 @@ "name": "SurviMChd", "version": "0.1.2", "sha256": "1lwbs9b8kc6lhlfjziphmdhm7h8p6d4fbhihsmjdi8lwngvpgxx8", - "depends": ["dplyr", "R2jags", "rjags"] + "depends": ["R2jags", "dplyr", "rjags"] }, "SurvivalClusteringTree": { "name": "SurvivalClusteringTree", "version": "1.1.1", "sha256": "1wxyk0b22igv319dpidm0b1wjp675k9z1araqzdd140lxan8nndf", - "depends": ["dplyr", "formula_tools", "gridtext", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "formula_tools", "gridtext", "survival"] }, "SurvivalTests": { "name": "SurvivalTests", @@ -33929,7 +34289,7 @@ "name": "SynDI", "version": "0.1.0", "sha256": "15vrp4qhgf0689h0jqygrdl1nl0xipwmy29dpfa8lx1vd1pb7dnn", - "depends": ["arm", "boot", "broom", "dplyr", "knitr", "magrittr", "MASS", "mice", "mvtnorm", "randomForest", "StackImpute"] + "depends": ["MASS", "StackImpute", "arm", "boot", "broom", "dplyr", "knitr", "magrittr", "mice", "mvtnorm", "randomForest"] }, "SyncMove": { "name": "SyncMove", @@ -33965,19 +34325,19 @@ "name": "SynthTools", "version": "1.0.1", "sha256": "19vasz3nnm5vgwqs6g2a5bibmk44br1bxga5zavsx938x3jw9gnd", - "depends": ["dplyr", "magrittr", "Rdpack"] + "depends": ["Rdpack", "dplyr", "magrittr"] }, "Sysrecon": { "name": "Sysrecon", "version": "0.1.3", "sha256": "01vbkv707m31bf69j3vxfiwgvaz56v2yr6da0j0796rcmca1d4b8", - "depends": ["ape", "dplyr", "ggplot2", "ggtree", "magrittr", "patchwork", "plyr", "RColorBrewer", "rlang", "SnowballC", "stringr", "tm"] + "depends": ["RColorBrewer", "SnowballC", "ape", "dplyr", "ggplot2", "ggtree", "magrittr", "patchwork", "plyr", "rlang", "stringr", "tm"] }, "SystemicR": { "name": "SystemicR", "version": "0.1.0", "sha256": "1vk08w734zxvrwzd81iy0azwcj53k6wvgc1qlaxw96hirdwdg6zr", - "depends": ["igraph", "Matrix", "quantreg", "xts"] + "depends": ["Matrix", "igraph", "quantreg", "xts"] }, "T2DFitTailor": { "name": "T2DFitTailor", @@ -34001,13 +34361,13 @@ "name": "T4cluster", "version": "0.1.2", "sha256": "0wai4qgpkwc1p5wwpvi0z6zrcj9ha1wiy27qjpcfvfa2bhaid2w5", - "depends": ["ADMM", "fda", "ggplot2", "lpSolve", "maotai", "MASS", "mclustcomp", "Rcpp", "RcppArmadillo", "Rdimtools", "Rdpack", "rstiefel", "scatterplot3d"] + "depends": ["ADMM", "MASS", "Rcpp", "RcppArmadillo", "Rdimtools", "Rdpack", "fda", "ggplot2", "lpSolve", "maotai", "mclustcomp", "rstiefel", "scatterplot3d"] }, "T4transport": { "name": "T4transport", "version": "0.1.2", "sha256": "091mq0f2cawkfmaql9gqgv2sbs5fwyv4i2sdw14p1r01wznfrqzf", - "depends": ["CVXR", "lpSolve", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["CVXR", "Rcpp", "RcppArmadillo", "Rdpack", "lpSolve"] }, "TAF": { "name": "TAF", @@ -34019,7 +34379,7 @@ "name": "TAG", "version": "0.5.1", "sha256": "1hni3ay1pg4gy3gm3sn3bcr8m3z2vlc5ivg7bmkzpxqdkl0w01h2", - "depends": ["DiceKriging", "FastGP", "foreach", "Matrix", "mgcv", "mlegp", "randtoolbox", "Rcpp", "RcppArmadillo"] + "depends": ["DiceKriging", "FastGP", "Matrix", "Rcpp", "RcppArmadillo", "foreach", "mgcv", "mlegp", "randtoolbox"] }, "TAM": { "name": "TAM", @@ -34031,7 +34391,7 @@ "name": "TANDEM", "version": "1.0.3", "sha256": "151rm95q2naw9y58df1lr2qiadnkgfb5j9v47v41bw4iipsmlp4p", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "TAQMNGR": { "name": "TAQMNGR", @@ -34049,7 +34409,7 @@ "name": "TAShiny", "version": "0.1.0", "sha256": "1h8k8py7myrj7c18cbp4q7bmgmck64jagw9s9j1jaqzl9qf8cbgq", - "depends": ["dplyr", "igraph", "shiny", "SnowballC", "tm", "wordcloud2"] + "depends": ["SnowballC", "dplyr", "igraph", "shiny", "tm", "wordcloud2"] }, "TBEST": { "name": "TBEST", @@ -34061,13 +34421,13 @@ "name": "TBFmultinomial", "version": "0.1.3", "sha256": "0cd0dr8vkf0sfriaafp2x63dilxmirm0fljxm82zw77c9j5ly3kv", - "depends": ["nnet", "plotrix", "stringr", "VGAM"] + "depends": ["VGAM", "nnet", "plotrix", "stringr"] }, "TBRDist": { "name": "TBRDist", "version": "1.0.2", "sha256": "0xwr91fyx3x27szkafmcs5sffgs64svky7mddrrgcfnbdl5c4iia", - "depends": ["ape", "BH", "Rcpp", "Rdpack", "TreeDist", "TreeTools"] + "depends": ["BH", "Rcpp", "Rdpack", "TreeDist", "TreeTools", "ape"] }, "TBox": { "name": "TBox", @@ -34079,7 +34439,7 @@ "name": "TCA", "version": "1.2.1", "sha256": "1gyps0m7r44vcbzpbrs3xy2kyb2xsvmfzk1c0aq04s4ndcksplwb", - "depends": ["config", "data_table", "futile_logger", "gmodels", "Matrix", "matrixcalc", "matrixStats", "nloptr", "pbapply", "pracma", "quadprog", "rsvd"] + "depends": ["Matrix", "config", "data_table", "futile_logger", "gmodels", "matrixStats", "matrixcalc", "nloptr", "pbapply", "pracma", "quadprog", "rsvd"] }, "TCGAretriever": { "name": "TCGAretriever", @@ -34089,9 +34449,9 @@ }, "TCHazaRds": { "name": "TCHazaRds", - "version": "1.0", - "sha256": "00x6iyf61igagcjyrl5623yymcrplm35k8j7326vx13g4lzsmnln", - "depends": ["geosphere", "latticeExtra", "ncdf4", "raster", "rasterVis", "Rcpp", "sp", "terra"] + "version": "1.1.0", + "sha256": "0v9zabnvm196053srcbfrg5aml8rrcbx5v9byq60gv8p588yfmf8", + "depends": ["Rcpp", "geosphere", "latticeExtra", "ncdf4", "raster", "rasterVis", "sp", "terra"] }, "TCIApathfinder": { "name": "TCIApathfinder", @@ -34103,7 +34463,7 @@ "name": "TCIU", "version": "1.2.6", "sha256": "0gbzpd0yadxrlsmnwk4kzf6bvm504k18i0sf2bq6zjaczdhc0vkp", - "depends": ["cubature", "doParallel", "dplyr", "DT", "extraDistr", "fancycut", "fmri", "foreach", "forecast", "geometry", "ggplot2", "ggpubr", "gridExtra", "ICSNP", "interp", "MultiwayRegression", "plotly", "pracma", "RColorBrewer", "reshape2", "rrcov", "scales", "spatstat_explore", "spatstat_geom", "tidyr", "zoo"] + "depends": ["DT", "ICSNP", "MultiwayRegression", "RColorBrewer", "cubature", "doParallel", "dplyr", "extraDistr", "fancycut", "fmri", "foreach", "forecast", "geometry", "ggplot2", "ggpubr", "gridExtra", "interp", "plotly", "pracma", "reshape2", "rrcov", "scales", "spatstat_explore", "spatstat_geom", "tidyr", "zoo"] }, "TCPMOR": { "name": "TCPMOR", @@ -34115,31 +34475,31 @@ "name": "TDA", "version": "1.9.1", "sha256": "1zf01dlc95mi59yrwz98w6qridmixgm399r0dq4g02xinz7dnar3", - "depends": ["BH", "FNN", "igraph", "Rcpp", "RcppEigen", "scales"] + "depends": ["BH", "FNN", "Rcpp", "RcppEigen", "igraph", "scales"] }, "TDAkit": { "name": "TDAkit", "version": "0.1.2", "sha256": "1gvcv3016kjk98qm07i972fi66bcljj1avmagyc8qxs29cq3ngg3", - "depends": ["energy", "ggplot2", "maotai", "Rcpp", "RcppArmadillo", "Rdpack", "T4cluster", "TDAstats"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "T4cluster", "TDAstats", "energy", "ggplot2", "maotai"] }, "TDApplied": { "name": "TDApplied", "version": "3.0.3", "sha256": "112zkkmi2677kyxkrk2669xdcr7g3f7saqa4iy2qi8k36all87l7", - "depends": ["clue", "doParallel", "foreach", "iterators", "kernlab", "parallelly", "Rcpp", "rdist"] + "depends": ["Rcpp", "clue", "doParallel", "foreach", "iterators", "kernlab", "parallelly", "rdist"] }, "TDAstats": { "name": "TDAstats", "version": "0.4.1", "sha256": "1zmickqk60vm9rzy67hib835v3c45aqjk441p31vpbvhbiy58nq5", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "TDAvec": { "name": "TDAvec", "version": "0.1.3", "sha256": "0g449p1y16sl35md9c4qnj3n7i5nx9appqx22d7ijjhr7zpv0p1s", - "depends": ["microbenchmark", "Rcpp", "TDA"] + "depends": ["Rcpp", "TDA", "microbenchmark"] }, "TDCM": { "name": "TDCM", @@ -34157,7 +34517,7 @@ "name": "TDLM", "version": "1.0.0", "sha256": "05gjbmhnamm94facg590sd1m7l3x51crd7x21ly6gmwyq5rjlffm", - "depends": ["Ecume", "mathjaxr", "Rdpack", "readr", "rmarkdown", "sf"] + "depends": ["Ecume", "Rdpack", "mathjaxr", "readr", "rmarkdown", "sf"] }, "TDPanalysis": { "name": "TDPanalysis", @@ -34199,7 +34559,7 @@ "name": "TELP", "version": "1.0.2", "sha256": "0abdbhp898lgv7jmgg82vzdx6ibyi053xw8b3p3kx49yfbiyynny", - "depends": ["arules", "arulesViz", "ggplot2", "gridExtra", "RColorBrewer", "tcltk2", "tm", "wordcloud"] + "depends": ["RColorBrewer", "arules", "arulesViz", "ggplot2", "gridExtra", "tcltk2", "tm", "wordcloud"] }, "TEQR": { "name": "TEQR", @@ -34211,7 +34571,7 @@ "name": "TESS", "version": "2.1.2", "sha256": "0qhzxppgk4ihkg00d08abb7xjl82n87mm3319iv0g7n6rky2qxy8", - "depends": ["ape", "coda", "deSolve", "Rcpp"] + "depends": ["Rcpp", "ape", "coda", "deSolve"] }, "TExPosition": { "name": "TExPosition", @@ -34247,7 +34607,7 @@ "name": "TFunHDDC", "version": "1.0.1", "sha256": "13j0bb2j2qrgbc8l3v1pg4c8frbi8cjfv09n2682z3zn90dz6z6d", - "depends": ["fda", "fda_usc", "MASS", "stringr", "tclust"] + "depends": ["MASS", "fda", "fda_usc", "stringr", "tclust"] }, "TGS": { "name": "TGS", @@ -34271,7 +34631,7 @@ "name": "THREC", "version": "1.0.0", "sha256": "0pdwjjsfqqbkfl21qiikcgl9psb9x2fh5qg7wi6x1kq906zzify7", - "depends": ["Deriv", "dplyr", "magic", "Matrix", "tidyr"] + "depends": ["Deriv", "Matrix", "dplyr", "magic", "tidyr"] }, "TIGERr": { "name": "TIGERr", @@ -34299,9 +34659,9 @@ }, "TKCat": { "name": "TKCat", - "version": "1.1.8", - "sha256": "0a2jfgg8rcgx4nckzmxk9a9jm4250a78pzcfaxj08d2gbkxairwz", - "depends": ["base64enc", "ClickHouseHTTP", "crayon", "DBI", "dplyr", "DT", "future", "getPass", "htmltools", "jsonlite", "jsonvalidate", "magrittr", "markdown", "Matrix", "promises", "readr", "ReDaMoR", "rlang", "roxygen2", "shiny", "shinydashboard", "tidyselect", "uuid", "visNetwork", "xml2"] + "version": "1.1.11", + "sha256": "1vwv7z669i7m0dq8jn24mia7y2pnbjvyprias8hnzh9gpwsv2b3w", + "depends": ["ClickHouseHTTP", "DBI", "DT", "Matrix", "ReDaMoR", "base64enc", "crayon", "dplyr", "future", "getPass", "htmltools", "jsonlite", "jsonvalidate", "magrittr", "markdown", "promises", "readr", "rlang", "roxygen2", "shiny", "shinydashboard", "tidyselect", "uuid", "visNetwork", "xml2"] }, "TLCAR": { "name": "TLCAR", @@ -34313,12 +34673,12 @@ "name": "TLMoments", "version": "0.7.5.3", "sha256": "096sr0j4vhlfsaxc565zgw0mjk4sxkl03i7ip3hzcfph1c05yj6h", - "depends": ["ggplot2", "hypergeo", "lmomco", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "hypergeo", "lmomco"] }, "TMB": { "name": "TMB", - "version": "1.9.11", - "sha256": "07z9565rn64k3ysvcgq6s792qg1v102gd9in5ifigm140zc4l45j", + "version": "1.9.14", + "sha256": "1lvbjz9w8m6awww1vkzaw1qc4mmhlmdlk9s4qd5i0568zb15m72d", "depends": ["Matrix", "RcppEigen"] }, "TMDb": { @@ -34329,9 +34689,9 @@ }, "TML": { "name": "TML", - "version": "1.2.0", - "sha256": "0krnh14mi3vi4msiz84f56kmzq12b1qc246jny37isl1b2wz2zrp", - "depends": ["ape", "cluster", "combinat", "gtools", "lpSolve", "lpSolveAPI", "magick", "maps", "MASS", "Matrix", "miscTools", "phangorn", "phytools", "rcdd", "RcppAlgos", "Rfast", "rgl", "ROCR", "stringr"] + "version": "2.3.0", + "sha256": "1157saqs5wczzz45pk966pi5wswlcm2fa22f0q9kdsg92rfgxja7", + "depends": ["MASS", "Matrix", "ROCR", "RcppAlgos", "Rfast", "ape", "cluster", "combinat", "gtools", "lpSolve", "lpSolveAPI", "maps", "miscTools", "phangorn", "phytools", "rcdd", "rgl"] }, "TNC": { "name": "TNC", @@ -34355,7 +34715,7 @@ "name": "TOHM", "version": "1.4", "sha256": "15i9hrvxlnwbs9vrsyrfhnm4xwmi97hss2da0xqs1xj5nmzwymqh", - "depends": ["EQL", "igraph", "Matrix", "nloptr", "Rmpfr"] + "depends": ["EQL", "Matrix", "Rmpfr", "igraph", "nloptr"] }, "TORDs": { "name": "TORDs", @@ -34367,25 +34727,25 @@ "name": "TOSI", "version": "0.3.0", "sha256": "00v0cjyz22akar7jrpg5alnnbh2nhxjh5cmq053i65xl0wlbzdpg", - "depends": ["glmnet", "hdi", "MASS", "scalreg"] + "depends": ["MASS", "glmnet", "hdi", "scalreg"] }, "TOSTER": { "name": "TOSTER", "version": "0.8.3", "sha256": "1xp3hcx4nhxqw9mdqhk9h11wy3zpwci0z0hc38pryq7y6rx8908f", - "depends": ["cowplot", "distributional", "ggdist", "ggplot2", "jmvcore", "lifecycle", "R6", "tidyr"] + "depends": ["R6", "cowplot", "distributional", "ggdist", "ggplot2", "jmvcore", "lifecycle", "tidyr"] }, "TOU": { "name": "TOU", "version": "0.1.0", "sha256": "0wia39yj7abnicx4xhaq1g69qx5fmzh6gywyl5yqfmw03azmyl55", - "depends": ["DEoptim", "ggplot2", "Rdpack"] + "depends": ["DEoptim", "Rdpack", "ggplot2"] }, "TOmicsVis": { "name": "TOmicsVis", "version": "2.0.0", "sha256": "0s46i8wnvvs15xwb0g62rpn864b27hbx0lrjpcv2wb1s27iz1wv3", - "depends": ["Biobase", "circlize", "clusterProfiler", "ComplexHeatmap", "cowplot", "dplyr", "e1071", "EnhancedVolcano", "enrichplot", "factoextra", "GGally", "ggcorrplot", "ggforce", "ggnewscale", "ggplot2", "ggplotify", "ggpolypath", "ggpubr", "ggrepel", "ggsci", "igraph", "Mfuzz", "pheatmap", "plotrix", "randomcoloR", "RColorBrewer", "reshape2", "Rtsne", "shiny", "stringr", "survival", "survminer", "tidyr", "umap", "UpSetR", "vegan", "venn", "WGCNA"] + "depends": ["Biobase", "ComplexHeatmap", "EnhancedVolcano", "GGally", "Mfuzz", "RColorBrewer", "Rtsne", "UpSetR", "WGCNA", "circlize", "clusterProfiler", "cowplot", "dplyr", "e1071", "enrichplot", "factoextra", "ggcorrplot", "ggforce", "ggnewscale", "ggplot2", "ggplotify", "ggpolypath", "ggpubr", "ggrepel", "ggsci", "igraph", "pheatmap", "plotrix", "randomcoloR", "reshape2", "shiny", "stringr", "survival", "survminer", "tidyr", "umap", "vegan", "venn"] }, "TP_idm": { "name": "TP.idm", @@ -34397,7 +34757,7 @@ "name": "TPAC", "version": "0.2.0", "sha256": "1k3nd3yrv1kxidjwaff4q9aqf7yqqwa6946a154y2h3k21kfmwcc", - "depends": ["data_table", "MASS", "TPACData"] + "depends": ["MASS", "TPACData", "data_table"] }, "TPACData": { "name": "TPACData", @@ -34409,7 +34769,7 @@ "name": "TPCselect", "version": "0.8.3", "sha256": "1x3db852zp3c12aihwbaak4i0dwjyl4sfv5snn7ap3gj3lydlznp", - "depends": ["corpcor", "KernSmooth", "MASS", "psych"] + "depends": ["KernSmooth", "MASS", "corpcor", "psych"] }, "TPD": { "name": "TPD", @@ -34421,7 +34781,7 @@ "name": "TPEA", "version": "3.1.0", "sha256": "1yyc3q4dyf4d8m7wi851dnxf3xnvvfnvj28kl8z8py4r4jsb2hfy", - "depends": ["foreach", "igraph", "Matrix", "MESS", "RCurl", "XML"] + "depends": ["MESS", "Matrix", "RCurl", "XML", "foreach", "igraph"] }, "TPES": { "name": "TPES", @@ -34439,7 +34799,7 @@ "name": "TPMplt", "version": "0.1.4", "sha256": "0zy6y9k7cqyflzma5567sn2jkvbmvl86zlrxiqlnga03hvsvw8a0", - "depends": ["dlm", "e1071", "ggplot2", "metR", "RColorBrewer", "rgl", "VBTree"] + "depends": ["RColorBrewer", "VBTree", "dlm", "e1071", "ggplot2", "metR", "rgl"] }, "TPmsm": { "name": "TPmsm", @@ -34451,7 +34811,7 @@ "name": "TR8", "version": "0.9.22", "sha256": "12miq65yl39pngpsa30qjcwp21vn93a4wvid03pmbf6x6hq0v4k7", - "depends": ["dplyr", "plyr", "rappdirs", "RCurl", "readxl", "reshape", "shiny", "taxize", "XML"] + "depends": ["RCurl", "XML", "dplyr", "plyr", "rappdirs", "readxl", "reshape", "shiny", "taxize"] }, "TRADER": { "name": "TRADER", @@ -34475,19 +34835,19 @@ "name": "TRES", "version": "1.1.5", "sha256": "0hrlqr6va7f17i4zizc2val2jxl151h8dbp4f97g0ixlqnv39qjl", - "depends": ["ManifoldOptim", "MASS", "pracma", "rTensor"] + "depends": ["MASS", "ManifoldOptim", "pracma", "rTensor"] }, "TRMF": { "name": "TRMF", "version": "0.2.1", "sha256": "1ar4shr2r58ksk7lzi3dwinp06d7inffrfmnvyb1s289swxg9a1w", - "depends": ["generics", "limSolve", "Matrix"] + "depends": ["Matrix", "generics", "limSolve"] }, "TRexSelector": { "name": "TRexSelector", "version": "1.0.0", "sha256": "1jxf4zxlhyinfa7w5h5zby7wy3bxbpcran5jy9byysgq5k8bqb5w", - "depends": ["boot", "doParallel", "doRNG", "foreach", "glmnet", "MASS", "tlars"] + "depends": ["MASS", "boot", "doParallel", "doRNG", "foreach", "glmnet", "tlars"] }, "TSA": { "name": "TSA", @@ -34505,7 +34865,7 @@ "name": "TSCI", "version": "3.0.4", "sha256": "01r09q1bvy8q28xmk28rmd3cx2y1kv9wgvrdmn3l08arjs83qv9g", - "depends": ["fastDummies", "ranger", "Rfast", "xgboost"] + "depends": ["Rfast", "fastDummies", "ranger", "xgboost"] }, "TSCS": { "name": "TSCS", @@ -34517,13 +34877,13 @@ "name": "TSDFGS", "version": "2.0", "sha256": "02p4caby7w1hgvizhm4cy0jr9mwwnh7gcq1snvz0cbd4mzpjcqgc", - "depends": ["dplyr", "ggplot2", "latex2exp", "lifecycle", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "dplyr", "ggplot2", "latex2exp", "lifecycle"] }, "TSDT": { "name": "TSDT", "version": "1.0.7", "sha256": "0h2nwlzq6p11735nhkkqz6r7lpmw98bwy9dpdmvj4wqb7c64p90p", - "depends": ["hash", "mlbench", "modeltools", "party", "rpart", "survival", "survRM2"] + "depends": ["hash", "mlbench", "modeltools", "party", "rpart", "survRM2", "survival"] }, "TSE": { "name": "TSE", @@ -34533,9 +34893,9 @@ }, "TSEAL": { "name": "TSEAL", - "version": "0.1.2", - "sha256": "1z1912mmmzyn4nh6cnkpddm5v25n87q1pqhd2q8k136xzncf9h57", - "depends": ["bigmemory", "caret", "checkmate", "magrittr", "MASS", "parallelly", "pryr", "statcomp", "synchronicity", "waveslim", "wdm"] + "version": "0.1.3", + "sha256": "1h0h5m19sp3g8nyj1hd7k4wbgal0ydvfw7f1kn6isfpk031bz5yb", + "depends": ["MASS", "bigmemory", "caret", "checkmate", "magrittr", "parallelly", "pryr", "statcomp", "synchronicity", "waveslim", "wdm"] }, "TSEind": { "name": "TSEind", @@ -34577,7 +34937,7 @@ "name": "TSGSIS", "version": "0.1", "sha256": "0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n", - "depends": ["glmnet", "MASS"] + "depends": ["MASS", "glmnet"] }, "TSHRC": { "name": "TSHRC", @@ -34619,13 +34979,13 @@ "name": "TSPred", "version": "5.1", "sha256": "14dzpm5i5iml9kb49rnw7kq1ga03l4c6m485b1p8p3ya0n6mivkl", - "depends": ["dplyr", "e1071", "elmNNRcpp", "EMD", "forecast", "keras", "KFAS", "magrittr", "ModelMetrics", "MuMIn", "nnet", "plyr", "randomForest", "Rlibeemd", "RSNNS", "tfdatasets", "vars", "wavelets"] + "depends": ["EMD", "KFAS", "ModelMetrics", "MuMIn", "RSNNS", "Rlibeemd", "dplyr", "e1071", "elmNNRcpp", "forecast", "keras", "magrittr", "nnet", "plyr", "randomForest", "tfdatasets", "vars", "wavelets"] }, "TSS_RESTREND": { "name": "TSS.RESTREND", "version": "0.3.1", "sha256": "1la1ff9ajcabdsz5f2761647304fpwp779gv0gjds4mg25rf6n2f", - "depends": ["bfast", "broom", "ggplot2", "mblm", "RcppRoll", "strucchange"] + "depends": ["RcppRoll", "bfast", "broom", "ggplot2", "mblm", "strucchange"] }, "TSSS": { "name": "TSSS", @@ -34655,7 +35015,7 @@ "name": "TSclust", "version": "1.3.1", "sha256": "1pj984sf7z0bakr55jqcrxr4mh4gihdv197m2k05phpp5hsplsjh", - "depends": ["cluster", "dtw", "forecast", "KernSmooth", "locpol", "longitudinalData", "pdc"] + "depends": ["KernSmooth", "cluster", "dtw", "forecast", "locpol", "longitudinalData", "pdc"] }, "TSdeeplearning": { "name": "TSdeeplearning", @@ -34667,13 +35027,13 @@ "name": "TSdisaggregation", "version": "2.0.0", "sha256": "1c1xsjhmm76hxin0hzr5bl94k5y3vwaprdrarpfil142cm8qnvnj", - "depends": ["lars", "Matrix", "Rdpack", "withr", "zoo"] + "depends": ["Matrix", "Rdpack", "lars", "withr", "zoo"] }, "TSdist": { "name": "TSdist", "version": "3.7.1", "sha256": "0qbsmaifwx4279w0rg111l8jdid12ljcy25ailn2d8gk47r4pv9z", - "depends": ["cluster", "dtw", "KernSmooth", "locpol", "longitudinalData", "pdc", "proxy", "TSclust", "xts", "zoo"] + "depends": ["KernSmooth", "TSclust", "cluster", "dtw", "locpol", "longitudinalData", "pdc", "proxy", "xts", "zoo"] }, "TSeriesMMA": { "name": "TSeriesMMA", @@ -34685,25 +35045,25 @@ "name": "TSrepr", "version": "1.1.0", "sha256": "1bplh808byfi86rz2bs1ikiggg0a1k0z282vidhygvl927hz2fa4", - "depends": ["dtt", "MASS", "mgcv", "quantreg", "Rcpp", "wavelets"] + "depends": ["MASS", "Rcpp", "dtt", "mgcv", "quantreg", "wavelets"] }, "TSsmoothing": { "name": "TSsmoothing", "version": "0.1.0", "sha256": "1m4y6hfw5ghqmvbnha05w6k0abbr08xdcahmh897g68b06vcrjsl", - "depends": ["ggplot2", "gridExtra", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "ggplot2", "gridExtra"] }, "TSstudio": { "name": "TSstudio", "version": "0.1.7", "sha256": "1r901773xpnly9rrzzvz41w9jzdjwcj8ssf37n8qsnpy40kz4wc0", - "depends": ["data_table", "dplyr", "forecast", "forecastHybrid", "lubridate", "magrittr", "plotly", "purrr", "RColorBrewer", "reshape2", "scales", "tidyr", "tsibble", "viridis", "xts", "zoo"] + "depends": ["RColorBrewer", "data_table", "dplyr", "forecast", "forecastHybrid", "lubridate", "magrittr", "plotly", "purrr", "reshape2", "scales", "tidyr", "tsibble", "viridis", "xts", "zoo"] }, "TT": { "name": "TT", "version": "0.98", "sha256": "0vnj2lmhn8qk3p8m8kvamp1af71iw3l75ds0mm9c8vinw2z4fzg3", - "depends": ["data_tree", "dplyr", "DT", "htmlwidgets", "magrittr", "purrr"] + "depends": ["DT", "data_tree", "dplyr", "htmlwidgets", "magrittr", "purrr"] }, "TTAinterfaceTrendAnalysis": { "name": "TTAinterfaceTrendAnalysis", @@ -34715,7 +35075,7 @@ "name": "TTCA", "version": "0.1.1", "sha256": "16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h", - "depends": ["MASS", "Matrix", "quantreg", "RISmed", "tcltk2", "VennDiagram"] + "depends": ["MASS", "Matrix", "RISmed", "VennDiagram", "quantreg", "tcltk2"] }, "TTR": { "name": "TTR", @@ -34739,7 +35099,7 @@ "name": "TULIP", "version": "1.0.2", "sha256": "16jf6ybwrhc4ckajdzpswilzn09agqz7mxg9a93gxkqvc2rwh5br", - "depends": ["glmnet", "MASS", "Matrix", "tensr"] + "depends": ["MASS", "Matrix", "glmnet", "tensr"] }, "TUWmodel": { "name": "TUWmodel", @@ -34751,7 +35111,7 @@ "name": "TVMM", "version": "3.2.1", "sha256": "0z2gdcci9pbpgnmr6dch5v0rsn34q18rwb14x9gyxdcvh3bch8z0", - "depends": ["DescToolsAddIns", "ggplot2", "gridExtra", "MASS", "robustbase", "tcltk2"] + "depends": ["DescToolsAddIns", "MASS", "ggplot2", "gridExtra", "robustbase", "tcltk2"] }, "Taba": { "name": "Taba", @@ -34805,7 +35165,7 @@ "name": "TangledFeatures", "version": "0.1.1", "sha256": "1jkhnl6y9jwxcj8njx2m8lax2z15ma6rk0bci871n4y6bp4bk4zn", - "depends": ["correlation", "data_table", "dplyr", "fastDummies", "ggplot2", "igraph", "janitor", "Matrix", "purrr", "ranger"] + "depends": ["Matrix", "correlation", "data_table", "dplyr", "fastDummies", "ggplot2", "igraph", "janitor", "purrr", "ranger"] }, "TapeR": { "name": "TapeR", @@ -34829,7 +35189,7 @@ "name": "TaxaNorm", "version": "2.4", "sha256": "1qlzmq8p90igns5bcl8ll20gbaid8aavzk7rhilzq7069i349idc", - "depends": ["BiocGenerics", "future", "future_apply", "ggplot2", "MASS", "matrixStats", "microbiome", "parallelly", "phyloseq", "pscl", "S4Vectors", "vegan"] + "depends": ["BiocGenerics", "MASS", "S4Vectors", "future", "future_apply", "ggplot2", "matrixStats", "microbiome", "parallelly", "phyloseq", "pscl", "vegan"] }, "TaxicabCA": { "name": "TaxicabCA", @@ -34847,13 +35207,13 @@ "name": "TcGSA", "version": "0.12.10", "sha256": "1bdffzq3zwvr0qsp71mp0fqf9dgx9n3f08c53adwavycwr6zg1l7", - "depends": ["cluster", "cowplot", "ggplot2", "GSA", "gtools", "lme4", "multtest", "reshape2", "stringr"] + "depends": ["GSA", "cluster", "cowplot", "ggplot2", "gtools", "lme4", "multtest", "reshape2", "stringr"] }, "Tcomp": { "name": "Tcomp", "version": "1.0.1", "sha256": "1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb", - "depends": ["forecast", "Mcomp"] + "depends": ["Mcomp", "forecast"] }, "TeXCheckR": { "name": "TeXCheckR", @@ -34901,7 +35261,7 @@ "name": "TempStable", "version": "0.2.2", "sha256": "0z432kpblx6v2krsxi92bpa4k19yqja09idqbka4nghcj7sgrsjr", - "depends": ["copula", "doParallel", "foreach", "gsl", "hypergeo", "moments", "numDeriv", "rootSolve", "stabledist", "StableEstim", "VGAM"] + "depends": ["StableEstim", "VGAM", "copula", "doParallel", "foreach", "gsl", "hypergeo", "moments", "numDeriv", "rootSolve", "stabledist"] }, "Temporal": { "name": "Temporal", @@ -34925,7 +35285,7 @@ "name": "TensorClustering", "version": "1.0.2", "sha256": "094pk4v78d97sanrkirk0dyhy6w2i43imcw21q2r76w11d62w7k7", - "depends": ["abind", "combinat", "MASS", "mvtnorm", "pracma", "Rcpp", "rTensor", "tensr", "TRES"] + "depends": ["MASS", "Rcpp", "TRES", "abind", "combinat", "mvtnorm", "pracma", "rTensor", "tensr"] }, "TensorComplete": { "name": "TensorComplete", @@ -34941,14 +35301,14 @@ }, "TensorTest2D": { "name": "TensorTest2D", - "version": "1.1.1", - "sha256": "1yx1ggsbximbsrwimyg7jblbqr0f75z278f38hg61qjxzf9m4ndk", + "version": "1.1.2", + "sha256": "18q4a155cxgzlbq5d4nfqvj88m5hc5ysdshkpcbih98axc6zm071", "depends": [] }, "Ternary": { "name": "Ternary", - "version": "2.3.1", - "sha256": "0amdyg41mhny74zdl8xm9f4ljii4w6lncq57xgw7qlq946dfp8zg", + "version": "2.3.2", + "sha256": "0jsb67zcp2q3mmkx6c1ns34i0x98xkzvbpmvpwn5mjssc6ir3q3m", "depends": ["PlotTools", "RcppHungarian", "shiny", "sp", "viridisLite"] }, "TesiproV": { @@ -34961,7 +35321,7 @@ "name": "TestAnaAPP", "version": "1.0.1", "sha256": "0550i7d4bpbd9bvs7sbjd5aaqpqjpd2fzfbplxfcvz2q9dwbcp49", - "depends": ["bruceR", "cowplot", "difR", "dplyr", "DT", "EstCRM", "flextable", "ggplot2", "golem", "latticeExtra", "mirt", "officedown", "officer", "openxlsx", "plotrix", "rmarkdown", "shiny", "shinycssloaders", "shinydashboard", "stringr", "tidyr", "tidySEM"] + "depends": ["DT", "EstCRM", "bruceR", "cowplot", "difR", "dplyr", "flextable", "ggplot2", "golem", "latticeExtra", "mirt", "officedown", "officer", "openxlsx", "plotrix", "rmarkdown", "shiny", "shinycssloaders", "shinydashboard", "stringr", "tidySEM", "tidyr"] }, "TestCor": { "name": "TestCor", @@ -34979,13 +35339,13 @@ "name": "TestDesign", "version": "1.6.1", "sha256": "0f13d6j9x9knsd7ynz025x4pv61n49jk5m9ih09cm8xz9g1ypb4n", - "depends": ["crayon", "foreach", "logitnorm", "lpSolve", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "crayon", "foreach", "logitnorm", "lpSolve"] }, "TestDimorph": { "name": "TestDimorph", "version": "0.5.8", "sha256": "1gnjgglb2mnaidlhjhqyg4jk6cvw0n0rzzpxamq55n8yyqd2kkh3", - "depends": ["corrplot", "dplyr", "ggplot2", "Morpho", "multcompView", "tidyr", "tmvtnorm", "truncnorm"] + "depends": ["Morpho", "corrplot", "dplyr", "ggplot2", "multcompView", "tidyr", "tmvtnorm", "truncnorm"] }, "TestFunctions": { "name": "TestFunctions", @@ -35003,7 +35363,7 @@ "name": "TestGenerator", "version": "0.3.1", "sha256": "15jgcknxdc1nh3325rzlax3q69dgfxb2a3xm2bzpi7fb7ryv5grz", - "depends": ["CDMConnector", "checkmate", "cli", "DBI", "dplyr", "duckdb", "ggplot2", "glue", "jsonlite", "readr", "readxl", "rlang", "testthat", "tibble", "withr"] + "depends": ["CDMConnector", "DBI", "checkmate", "cli", "dplyr", "duckdb", "ggplot2", "glue", "jsonlite", "readr", "readxl", "rlang", "testthat", "tibble", "withr"] }, "TestIndVars": { "name": "TestIndVars", @@ -35021,13 +35381,13 @@ "name": "TestingSimilarity", "version": "1.1", "sha256": "1iq0wh13rl6rby44ql4d286r1akzwmbpsvnq9p8lkl8709z0d34w", - "depends": ["alabama", "DoseFinding", "lattice"] + "depends": ["DoseFinding", "alabama", "lattice"] }, "TestsSymmetry": { "name": "TestsSymmetry", "version": "1.0.0", "sha256": "0dbgw14m4nk1x9y186v3ynqrv14z8irr7yyq4087sqmpj6y79sb5", - "depends": ["e1071", "MASS", "Rcpp", "rpart"] + "depends": ["MASS", "Rcpp", "e1071", "rpart"] }, "Tex4exams": { "name": "Tex4exams", @@ -35039,19 +35399,19 @@ "name": "TexExamRandomizer", "version": "1.2.7", "sha256": "0anvlss8j4nlc9n8hswm5ljfpmbxfcl4rm5y53k0q04apx3q3gg8", - "depends": ["assertthat", "jsonlite", "Rcpp", "stringr"] + "depends": ["Rcpp", "assertthat", "jsonlite", "stringr"] }, "TextForecast": { "name": "TextForecast", "version": "0.1.3", "sha256": "0fjywwifkxpfyqhq6yrjy0ipnfr3lfgb179w993qj8f9nmdclrw1", - "depends": ["doParallel", "dplyr", "forcats", "forecast", "ggplot2", "glmnet", "Matrix", "pdftools", "plyr", "pracma", "RColorBrewer", "tidyr", "tidytext", "tm", "udpipe", "wordcloud"] + "depends": ["Matrix", "RColorBrewer", "doParallel", "dplyr", "forcats", "forecast", "ggplot2", "glmnet", "pdftools", "plyr", "pracma", "tidyr", "tidytext", "tm", "udpipe", "wordcloud"] }, "TextMiningGUI": { "name": "TextMiningGUI", "version": "0.3", "sha256": "0hl4rswc3icwf11idk9ydrbd3ghz6mb1vnabknal0fxffpdi37dd", - "depends": ["dplyr", "ggplot2", "ggwordcloud", "RColorBrewer", "slam", "syuzhet", "tibble", "tidyr", "tidytext", "tm"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggwordcloud", "slam", "syuzhet", "tibble", "tidyr", "tidytext", "tm"] }, "ThankYouStars": { "name": "ThankYouStars", @@ -35063,7 +35423,7 @@ "name": "TheOpenAIR", "version": "0.1.0", "sha256": "0ygv8hj3cnac8w8ppddnia03gw4cwi49gv9jddcc1132fkg6nbyr", - "depends": ["cli", "data_table", "httr", "magrittr", "R_utils", "reticulate", "rstudioapi", "stringi", "stringr", "tibble", "xml2"] + "depends": ["R_utils", "cli", "data_table", "httr", "magrittr", "reticulate", "rstudioapi", "stringi", "stringr", "tibble", "xml2"] }, "TheSFACE": { "name": "TheSFACE", @@ -35081,7 +35441,7 @@ "name": "ThermalSampleR", "version": "0.1.2", "sha256": "1s1hxfssh7d0c4v4phvqpkr4asfrflg84hznz2qgjrn9k0dbkljj", - "depends": ["cowplot", "dplyr", "EnvStats", "ggplot2", "janitor", "magrittr", "MASS", "purrr", "rlang", "sn", "testthat", "tidyr"] + "depends": ["EnvStats", "MASS", "cowplot", "dplyr", "ggplot2", "janitor", "magrittr", "purrr", "rlang", "sn", "testthat", "tidyr"] }, "Thermimage": { "name": "Thermimage", @@ -35097,9 +35457,9 @@ }, "ThomasJeffersonUniv": { "name": "ThomasJeffersonUniv", - "version": "0.1.2", - "sha256": "1flj8jrkaj7l3a6lq2ir365rfnyd883kbd90lbfal44nsb7y3j43", - "depends": ["lubridate", "stringdist", "survival", "timeDate", "writexl", "zoo"] + "version": "0.1.3", + "sha256": "1bf5dch0z077is7zz49hhwf3l2y4qpg47gdhvbp2968pb35mn35j", + "depends": ["lubridate", "stringdist", "stringi", "survival", "timeDate", "writexl", "zoo"] }, "ThreeGroups": { "name": "ThreeGroups", @@ -35123,31 +35483,31 @@ "name": "Thresher", "version": "1.1.4", "sha256": "01rjm3j1zxx7gc0m8cr5jgcbr6pz11mqxr5sw0bgh6kdc5n0by0n", - "depends": ["ade4", "ClassDiscovery", "colorspace", "MASS", "movMF", "oompaBase", "PCDimension"] + "depends": ["ClassDiscovery", "MASS", "PCDimension", "ade4", "colorspace", "movMF", "oompaBase"] }, "ThresholdROC": { "name": "ThresholdROC", "version": "2.9.4", "sha256": "1vh4fx8vbk5w6nrgkldnhxbhcdcrdc7sxhvm0gsn1gh7w5cgndq7", - "depends": ["ks", "MASS", "numDeriv", "pROC"] + "depends": ["MASS", "ks", "numDeriv", "pROC"] }, "ThresholdROCsurvival": { "name": "ThresholdROCsurvival", "version": "1.2.1", "sha256": "13njr43fb8jnjcy1n32q8rbrgqag9cdcwx4rpx16rx7kvjr23gcw", - "depends": ["boot", "InformativeCensoring", "pROC", "psych", "survival", "ThresholdROC"] + "depends": ["InformativeCensoring", "ThresholdROC", "boot", "pROC", "psych", "survival"] }, "ThurMod": { "name": "ThurMod", "version": "1.1.11", "sha256": "01ay1w3h300day5aljha93xyk0n8a98c7g5binvchgsa019mg9dd", - "depends": ["lavaan", "MASS", "matrixStats", "mvtnorm"] + "depends": ["MASS", "lavaan", "matrixStats", "mvtnorm"] }, "TiPS": { "name": "TiPS", "version": "1.2.3", "sha256": "061lyai1kjm5glm69wxpnqvgp1xzj8j893pa73x5fl228dqm526f", - "depends": ["gtools", "inline", "Rcpp", "stringr"] + "depends": ["Rcpp", "gtools", "inline", "stringr"] }, "TideCurves": { "name": "TideCurves", @@ -35177,7 +35537,7 @@ "name": "TidyConsultant", "version": "0.1.1", "sha256": "00gw5h3n04nnrkrqx981rksi4liydmljj4nnnjnnh2a7ra98pcln", - "depends": ["autostats", "badger", "Ckmeans_1d_dp", "framecleaner", "pacman", "presenter", "tidybins", "validata"] + "depends": ["Ckmeans_1d_dp", "autostats", "badger", "framecleaner", "pacman", "presenter", "tidybins", "validata"] }, "TidyDensity": { "name": "TidyDensity", @@ -35219,7 +35579,7 @@ "name": "TipDatingBeast", "version": "1.1-0", "sha256": "07lw6jnr76qrxwrwv90hi5ih2xf6g4sz4hfapk5vf1y3ayfskkl0", - "depends": ["DescTools", "mclust", "TeachingDemos"] + "depends": ["DescTools", "TeachingDemos", "mclust"] }, "Tlasso": { "name": "Tlasso", @@ -35243,19 +35603,19 @@ "name": "TooManyCellsR", "version": "0.1.1.0", "sha256": "0cypjf4a9q2kw4gwxlr59nbwn25wrrhrcmpksxi2yhd3qhk71q8n", - "depends": ["cowplot", "ggplot2", "imager", "jsonlite", "Matrix"] + "depends": ["Matrix", "cowplot", "ggplot2", "imager", "jsonlite"] }, "ToolsForCoDa": { "name": "ToolsForCoDa", "version": "1.0.6", "sha256": "1c37xv8h4jycnn9cnxlvby3p8hl3gfp4bdsbxm06bb323qj774pd", - "depends": ["calibrate", "HardyWeinberg", "MASS"] + "depends": ["HardyWeinberg", "MASS", "calibrate"] }, "Toothnroll": { "name": "Toothnroll", "version": "1.11", "sha256": "1xd6p1yxfp6x48cg81r8bgd8v19rpymbsnlzczylkzh6w7khaafl", - "depends": ["alphashape3d", "Arothron", "colorRamps", "compositions", "DescTools", "geometry", "lattice", "mgcv", "Morpho", "morphomap", "oce", "rgl", "Rvcg", "stringr", "vegan"] + "depends": ["Arothron", "DescTools", "Morpho", "Rvcg", "alphashape3d", "colorRamps", "compositions", "geometry", "lattice", "mgcv", "morphomap", "oce", "rgl", "stringr", "vegan"] }, "TopDom": { "name": "TopDom", @@ -35267,13 +35627,13 @@ "name": "TopKLists", "version": "1.0.8", "sha256": "1l2fshf4w2ykhxb1bhrblcknxppy4l4w5w0pm16zcvkhrsas06cs", - "depends": ["gplots", "Hmisc"] + "depends": ["Hmisc", "gplots"] }, "TopKSignal": { "name": "TopKSignal", "version": "1.0", "sha256": "1767v8njdi736im8fhf9yihrbxjrnyhs7xpmdzphsm55qm8rda1x", - "depends": ["doParallel", "foreach", "ggplot2", "Matrix", "nloptr", "reshape2"] + "depends": ["Matrix", "doParallel", "foreach", "ggplot2", "nloptr", "reshape2"] }, "TopSisWM": { "name": "TopSisWM", @@ -35285,7 +35645,7 @@ "name": "TopicScore", "version": "0.0.1", "sha256": "1x6s3yn25rj8mbd25yi7f2rz0nwg8n0l1vs6r250kyjb17d2javm", - "depends": ["combinat", "Matrix", "quadprog", "RSpectra", "slam"] + "depends": ["Matrix", "RSpectra", "combinat", "quadprog", "slam"] }, "TotalCopheneticIndex": { "name": "TotalCopheneticIndex", @@ -35309,43 +35669,43 @@ "name": "TraMineR", "version": "2.2-10", "sha256": "19l51vjn4ljyfghsl93amh94zqsvf290ahvb7r4z6kqgdbz8j5lb", - "depends": ["boot", "cluster", "colorspace", "RColorBrewer", "vegan"] + "depends": ["RColorBrewer", "boot", "cluster", "colorspace", "vegan"] }, "TraMineRextras": { "name": "TraMineRextras", - "version": "0.6.7", - "sha256": "06kl8xxszwdra3dyapnk76frnz416lbkqfvxc115pnwxlf8ad8v5", - "depends": ["cluster", "colorspace", "doParallel", "foreach", "RColorBrewer", "survival", "TraMineR"] + "version": "0.6.8", + "sha256": "1nwhy0l9af9k320bwzd0klrz3n7kad95j2pr813x4b5jb7nxrr92", + "depends": ["RColorBrewer", "TraMineR", "cluster", "colorspace", "doParallel", "foreach", "survival"] }, "TraceAssist": { "name": "TraceAssist", "version": "0.1.0", "sha256": "03x071nsfgz1z2qp1zn1y3hfx8ydpj0z4rcfk2i588ad53z86w4c", - "depends": ["glmnet", "keras", "Matrix", "quadprog"] + "depends": ["Matrix", "glmnet", "keras", "quadprog"] }, "TrackReconstruction": { "name": "TrackReconstruction", "version": "1.3", "sha256": "0x2wydp9qj2r2rsv0kmwlq4y7mr391ya13rpnj3mdgl0pjdp445s", - "depends": ["fields", "RColorBrewer"] + "depends": ["RColorBrewer", "fields"] }, "Trading": { "name": "Trading", "version": "3.0", "sha256": "1xf3qr6g8vxdwrx57pazr79k86d3mdhqaps0vj8iz4dr172gms8k", - "depends": ["data_table", "ggplot2", "PerformanceAnalytics", "RcppAlgos", "readxl", "reticulate"] + "depends": ["PerformanceAnalytics", "RcppAlgos", "data_table", "ggplot2", "readxl", "reticulate"] }, "TrafficBDE": { "name": "TrafficBDE", "version": "0.1.2", "sha256": "1xjvh0y1fw6j3psjm61wmggaf61qx13mirjyrli4cf7z1k7r0fzw", - "depends": ["caret", "data_table", "DescriptiveStats_OBeu", "dplyr", "lubridate", "RCurl", "zoo"] + "depends": ["DescriptiveStats_OBeu", "RCurl", "caret", "data_table", "dplyr", "lubridate", "zoo"] }, "TransGraph": { "name": "TransGraph", "version": "1.0.1", "sha256": "0fr038zd4gg3cjlsjl6jz6a73bp0rfbxmgphnbv0ambbm62i9w3h", - "depends": ["clime", "dcov", "doParallel", "EvaluationMeasures", "expm", "glasso", "HeteroGGM", "huge", "MASS", "rTensor", "Tlasso"] + "depends": ["EvaluationMeasures", "HeteroGGM", "MASS", "Tlasso", "clime", "dcov", "doParallel", "expm", "glasso", "huge", "rTensor"] }, "TransModel": { "name": "TransModel", @@ -35363,13 +35723,13 @@ "name": "TransPhylo", "version": "1.4.5", "sha256": "0g92kwi1nlmpc8m4pc9kv9xhczryr2kn9icfr3js7da7vy8g50xy", - "depends": ["ape", "Rcpp"] + "depends": ["Rcpp", "ape"] }, "TransTGGM": { "name": "TransTGGM", "version": "1.0.0", "sha256": "0c815qp0nb4c8ymq9gm9yr37vkzlb6fja9j0czl6ww7rvr8fplrn", - "depends": ["doParallel", "expm", "glasso", "MASS", "Matrix", "rTensor", "Tlasso"] + "depends": ["MASS", "Matrix", "Tlasso", "doParallel", "expm", "glasso", "rTensor"] }, "Transform": { "name": "Transform", @@ -35387,7 +35747,7 @@ "name": "TreatmentPatterns", "version": "2.6.7", "sha256": "1s6rvsqa4q6nr9vlfmcysn58qw88df05fp638y8yxc791bw120gm", - "depends": ["Andromeda", "checkmate", "dplyr", "htmlwidgets", "networkD3", "R6", "shiny", "shinydashboard", "stringr", "sunburstR", "tidyr"] + "depends": ["Andromeda", "R6", "checkmate", "dplyr", "htmlwidgets", "networkD3", "shiny", "shinydashboard", "stringr", "sunburstR", "tidyr"] }, "TreatmentSelection": { "name": "TreatmentSelection", @@ -35399,7 +35759,7 @@ "name": "TreeBUGS", "version": "1.5.0", "sha256": "0nxv2hh7flmyfm2pap97hwjyz29hfzybfv3b1v0ygqffgmh1j7mb", - "depends": ["coda", "hypergeo", "logspline", "MASS", "Rcpp", "RcppArmadillo", "rjags", "runjags"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "coda", "hypergeo", "logspline", "rjags", "runjags"] }, "TreeDep": { "name": "TreeDep", @@ -35417,13 +35777,13 @@ "name": "TreeDimensionTest", "version": "0.0.2", "sha256": "1bwvspjvc1cragbsrc05vhwk0zmfj36r9piqbj0vgahpjb4cswn9", - "depends": ["fitdistrplus", "igraph", "mlpack", "nFactors", "RColorBrewer", "Rcpp", "Rdpack"] + "depends": ["RColorBrewer", "Rcpp", "Rdpack", "fitdistrplus", "igraph", "mlpack", "nFactors"] }, "TreeDist": { "name": "TreeDist", - "version": "2.7.0", - "sha256": "1x92z0ipk3rk94hxc3al76y51pzha2csry3vrflll7sgshkbr5rj", - "depends": ["ape", "cli", "colorspace", "memoise", "phangorn", "Rcpp", "Rdpack", "shiny", "shinyjs", "TreeTools"] + "version": "2.8.0", + "sha256": "1l8clk5b4fivinxjr0amd0kcwa2bg4mb4cjk8f9cxhbp2kk78kr0", + "depends": ["Rcpp", "Rdpack", "TreeTools", "ape", "cli", "colorspace", "memoise", "shiny", "shinyjs"] }, "TreeMineR": { "name": "TreeMineR", @@ -35441,7 +35801,7 @@ "name": "TreeSearch", "version": "1.5.1", "sha256": "0nxzjv4q052nsfrib3i95b92alxipds5bll1aldh88dabhn3c0v5", - "depends": ["ape", "cli", "cluster", "fastmatch", "fs", "future", "PlotTools", "promises", "protoclust", "Rcpp", "Rdpack", "Rogue", "shiny", "shinyjs", "TreeDist", "TreeTools"] + "depends": ["PlotTools", "Rcpp", "Rdpack", "Rogue", "TreeDist", "TreeTools", "ape", "cli", "cluster", "fastmatch", "fs", "future", "promises", "protoclust", "shiny", "shinyjs"] }, "TreeSim": { "name": "TreeSim", @@ -35453,25 +35813,25 @@ "name": "TreeSimGM", "version": "2.5", "sha256": "125c9rim272h0dfyygmmijz8dcnch3g9wy1ngki77dyrmdl77yfx", - "depends": ["ape", "TreeSim"] + "depends": ["TreeSim", "ape"] }, "TreeTools": { "name": "TreeTools", - "version": "1.11.1", - "sha256": "067cxg655bkbcp5ngj3r1i6hs49j8ql1dh1dafzv3gjalx735iav", - "depends": ["ape", "bit64", "colorspace", "fastmatch", "lifecycle", "PlotTools", "R_cache", "Rcpp", "RCurl", "Rdpack"] + "version": "1.12.0", + "sha256": "1pqz5nnrwp4v7h0kz21ny3mdlw9qdqf69hh2mrc92piivx1w3ck5", + "depends": ["PlotTools", "RCurl", "R_cache", "Rcpp", "Rdpack", "ape", "bit64", "colorspace", "fastmatch", "lifecycle"] }, "TrenchR": { "name": "TrenchR", "version": "1.1.1", "sha256": "0724dgm9yl906lk2vxffd465gy9kv7fdb0yymbnbq9flwxr4nfig", - "depends": ["deSolve", "msm", "Rdpack", "zoo"] + "depends": ["Rdpack", "deSolve", "msm", "zoo"] }, "TrendInTrend": { "name": "TrendInTrend", "version": "1.1.3", "sha256": "0ijkijyhxhjc7202qssa9wnrmwgv4miv5n8jbml4qqj80kcsbdwp", - "depends": ["nleqslv", "pracma", "pROC", "rms"] + "depends": ["nleqslv", "pROC", "pracma", "rms"] }, "TrendLSW": { "name": "TrendLSW", @@ -35483,7 +35843,7 @@ "name": "TrendSLR", "version": "1.0", "sha256": "1x8j2dg3m7b22gva33y4s318a41wl60sz93y868z4j65hp13jb5k", - "depends": ["changepoint", "forecast", "imputeTS", "plyr", "Rssa", "tseries", "zoo"] + "depends": ["Rssa", "changepoint", "forecast", "imputeTS", "plyr", "tseries", "zoo"] }, "TrendTM": { "name": "TrendTM", @@ -35507,13 +35867,13 @@ "name": "TriDimRegression", "version": "1.0.2", "sha256": "1p6dncx53bk7vca193c46idsw6hvn0z5px3p3zh0qky1jan2rycl", - "depends": ["bayesplot", "BH", "dplyr", "Formula", "future", "glue", "loo", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "StanHeaders", "tidyr"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "dplyr", "future", "glue", "loo", "purrr", "rstan", "tidyr"] }, "TriMatch": { "name": "TriMatch", "version": "0.9.9", "sha256": "17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg", - "depends": ["ez", "ggplot2", "gridExtra", "PSAgraphics", "psych", "randomForest", "reshape2", "scales"] + "depends": ["PSAgraphics", "ez", "ggplot2", "gridExtra", "psych", "randomForest", "reshape2", "scales"] }, "TriadSim": { "name": "TriadSim", @@ -35525,7 +35885,7 @@ "name": "TrialEmulation", "version": "0.0.3.8", "sha256": "05gm3fpwdam3cnm0x6s4mzpjvb98yfi4alxgdanmscvx44c5ry8i", - "depends": ["broom", "checkmate", "data_table", "formula_tools", "mvtnorm", "parglm", "Rcpp", "sandwich"] + "depends": ["Rcpp", "broom", "checkmate", "data_table", "formula_tools", "mvtnorm", "parglm", "sandwich"] }, "TrialSize": { "name": "TrialSize", @@ -35549,7 +35909,7 @@ "name": "TropFishR", "version": "1.6.4", "sha256": "0y4bqy27f5ngpz9z24fbl209gg9mlrj8gryn8774abvhvv62z6k0", - "depends": ["doParallel", "GA", "GenSA", "MASS", "Matrix", "msm", "propagate", "reshape2"] + "depends": ["GA", "GenSA", "MASS", "Matrix", "doParallel", "msm", "propagate", "reshape2"] }, "TroublemakeR": { "name": "TroublemakeR", @@ -35583,9 +35943,9 @@ }, "TruncatedNormal": { "name": "TruncatedNormal", - "version": "2.2.2", - "sha256": "05cfn7mdq0hgw97bbb227in9ccjz727sp67xpnpx2r1ajvl6gxdf", - "depends": ["alabama", "nleqslv", "randtoolbox", "Rcpp", "RcppArmadillo"] + "version": "2.3", + "sha256": "0r40l1nc7k4q0mfzs5iv2jvj565qrzk8qrblkliwqqyjwab7kdzg", + "depends": ["Rcpp", "RcppArmadillo", "alabama", "nleqslv", "qrng", "spacefillr"] }, "TukeyC": { "name": "TukeyC", @@ -35603,7 +35963,7 @@ "name": "TukeyRegion", "version": "0.1.6.3", "sha256": "02w84bha6niyval71a06ibk42crvv2259302ckdzmb61ik9sg44d", - "depends": ["bfp", "BH", "ddalpha", "MASS", "Rcpp", "rgl", "Rglpk"] + "depends": ["BH", "MASS", "Rcpp", "Rglpk", "bfp", "ddalpha", "rgl"] }, "TunePareto": { "name": "TunePareto", @@ -35627,7 +35987,7 @@ "name": "Twitmo", "version": "0.1.2", "sha256": "0hr2gndrcsd4r4jxyzg1jbjbn1zslv8z5ny3xh42hda93866909d", - "depends": ["dplyr", "jsonlite", "ldatuning", "LDAvis", "leaflet", "magrittr", "maps", "plyr", "quanteda", "quanteda_textstats", "readr", "rlang", "rtweet", "stm", "stopwords", "stringi", "stringr", "tidyr", "tm", "topicmodels"] + "depends": ["LDAvis", "dplyr", "jsonlite", "ldatuning", "leaflet", "magrittr", "maps", "plyr", "quanteda", "quanteda_textstats", "readr", "rlang", "rtweet", "stm", "stopwords", "stringi", "stringr", "tidyr", "tm", "topicmodels"] }, "TwitterAutomatedTrading": { "name": "TwitterAutomatedTrading", @@ -35661,8 +36021,8 @@ }, "TwoWayFEWeights": { "name": "TwoWayFEWeights", - "version": "2.0.3", - "sha256": "0glwykcbnp65nc345b6k8dc74dvn7bghr045mvqk3jqmmrha0pd8", + "version": "2.0.4", + "sha256": "0jx12g2igyir50mq1wm2nl76lw02wf5gw837wvl19ffsji19mn4p", "depends": ["cli", "dplyr", "fixest", "haven", "magrittr", "rlang"] }, "UBCRM": { @@ -35675,13 +36035,13 @@ "name": "UBL", "version": "0.0.9", "sha256": "1jpm41la5210a9shak01fsgq2yw8l1cz5zbb5zlas2nc2jg7hslh", - "depends": ["automap", "gstat", "MBA", "randomForest", "sp"] + "depends": ["MBA", "automap", "gstat", "randomForest", "sp"] }, "UBayFS": { "name": "UBayFS", "version": "1.0", "sha256": "1aj627f8w30wfnf313adza85jffnp1yq34ri8cfaz5v0jzs1bfib", - "depends": ["DirichletReg", "GA", "ggplot2", "gridExtra", "hyper2", "matrixStats", "mRMRe", "Rdimtools", "shiny"] + "depends": ["DirichletReg", "GA", "Rdimtools", "ggplot2", "gridExtra", "hyper2", "mRMRe", "matrixStats", "shiny"] }, "UCR_ColumnNames": { "name": "UCR.ColumnNames", @@ -35693,7 +36053,7 @@ "name": "UCSCXenaShiny", "version": "2.1.0", "sha256": "080a3p3cb818hns7f72c411bh13clfn3b6xl7wlx41z69swphb5m", - "depends": ["digest", "dplyr", "ezcox", "forcats", "ggplot2", "ggpubr", "httr", "magrittr", "ppcor", "psych", "purrr", "rlang", "shiny", "stringr", "tibble", "tidyr", "UCSCXenaTools"] + "depends": ["UCSCXenaTools", "digest", "dplyr", "ezcox", "forcats", "ggplot2", "ggpubr", "httr", "magrittr", "ppcor", "psych", "purrr", "rlang", "shiny", "stringr", "tibble", "tidyr"] }, "UCSCXenaTools": { "name": "UCSCXenaTools", @@ -35703,9 +36063,15 @@ }, "UComp": { "name": "UComp", - "version": "4.0.2", - "sha256": "0k89palrdifgrz45ar3dcnrwpxwb01nqsg9k1qkwrilhyj9c254k", - "depends": ["ggforce", "ggplot2", "gridExtra", "Rcpp", "RcppArmadillo", "tsibble", "tsoutliers"] + "version": "5.0.4", + "sha256": "0wvam2fg9adpz53jbyc5ksfldg0kllvij0968acz0y3qkgm06a5x", + "depends": ["Rcpp", "RcppArmadillo", "ggforce", "ggplot2", "gridExtra", "tsibble", "tsoutliers"] + }, + "UEI": { + "name": "UEI", + "version": "0.1.0", + "sha256": "0q72avm90x518dcnl60jvg1rpxnizz0hr02mc8wlfr9cinz7r841", + "depends": ["FactoMineR", "Metrics", "factoextra"] }, "UHM": { "name": "UHM", @@ -35715,8 +36081,8 @@ }, "UKB_COVID19": { "name": "UKB.COVID19", - "version": "0.1.4", - "sha256": "0f684nkyrk9dl7hz9mzbb3x8gza5prd8zrg8ajfyjiqif7c6hkbg", + "version": "0.1.6", + "sha256": "02crz9spzl7xpa1csrwrrja9a6z8937rghfkm1awwwv4nrx1cwr6", "depends": ["data_table", "dplyr", "here", "magrittr", "questionr", "tidyverse"] }, "UKFE": { @@ -35735,19 +36101,19 @@ "name": "UNCOVER", "version": "1.1.0", "sha256": "0x5ggwnzca6wz3ikpsa3aq8b715w8drkpchqp3jsg0g9imiw5y3m", - "depends": ["cachem", "crayon", "GGally", "ggnewscale", "ggplot2", "ggpubr", "igraph", "memoise", "mvnfast", "scales"] + "depends": ["GGally", "cachem", "crayon", "ggnewscale", "ggplot2", "ggpubr", "igraph", "memoise", "mvnfast", "scales"] }, "UNPaC": { "name": "UNPaC", "version": "1.1.1", "sha256": "1dqli7fanh0gk2bfbcykrrswyjrl9g4rbplxjxgjri7kkmf03cd0", - "depends": ["huge", "PDSCE"] + "depends": ["PDSCE", "huge"] }, "UPCM": { "name": "UPCM", "version": "0.0-3", "sha256": "1apah04qdgvxxf6q6xr53716pcrmds86sn8f7ykxj93ggg8k0bvl", - "depends": ["cubature", "ltm", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["Rcpp", "RcppArmadillo", "cubature", "ltm", "mvtnorm", "numDeriv", "statmod"] }, "UPG": { "name": "UPG", @@ -35823,9 +36189,9 @@ }, "Umatrix": { "name": "Umatrix", - "version": "4.0", - "sha256": "0mpn61hiqx5ql23qwi299ifmpgcyx2px1hj70kq1ybqwxi9kyc1w", - "depends": ["abind", "AdaptGauss", "DataVisualizations", "deldir", "fields", "geometry", "ggplot2", "pdist", "plyr", "png", "Rcpp", "reshape2", "shiny", "shinyjs"] + "version": "4.0.1", + "sha256": "03ci20nz0vfaw36miq1gvyg0spmmg2bd229xkrnbv6za1q18y08l", + "depends": ["AdaptGauss", "DataVisualizations", "Rcpp", "abind", "deldir", "fields", "geometry", "ggplot2", "pdist", "plyr", "png", "reshape2", "shiny", "shinyjs"] }, "Umoments": { "name": "Umoments", @@ -35843,7 +36209,7 @@ "name": "UnalR", "version": "1.0.0", "sha256": "1zw68ss0jlyg9mm5qy0k7dqbag8qz08yc96kfmib028d72jsh41d", - "depends": ["cli", "d3r", "data_tree", "dplyr", "DT", "dygraphs", "echarts4r", "fmsb", "forcats", "ggplot2", "ggrepel", "ggspatial", "gridSVG", "gt", "gtExtras", "highcharter", "htmltools", "htmlwidgets", "jsonlite", "leaflet", "leaflet_extras", "lifecycle", "magrittr", "maps", "plotly", "png", "rlang", "scales", "sf", "sp", "stringr", "sunburstR", "tidyr", "treemap", "webshot", "XML", "xts", "zoo"] + "depends": ["DT", "XML", "cli", "d3r", "data_tree", "dplyr", "dygraphs", "echarts4r", "fmsb", "forcats", "ggplot2", "ggrepel", "ggspatial", "gridSVG", "gt", "gtExtras", "highcharter", "htmltools", "htmlwidgets", "jsonlite", "leaflet", "leaflet_extras", "lifecycle", "magrittr", "maps", "plotly", "png", "rlang", "scales", "sf", "sp", "stringr", "sunburstR", "tidyr", "treemap", "webshot", "xts", "zoo"] }, "UncDecomp": { "name": "UncDecomp", @@ -35867,7 +36233,7 @@ "name": "Unico", "version": "0.1.0", "sha256": "16zp9fdd1a0w3zisqyiklhhn2y84f3aq63wzzqkfg0hsf2sdcvya", - "depends": ["compositions", "config", "data_table", "futile_logger", "MASS", "matrixcalc", "matrixStats", "mgcv", "nloptr", "pbapply", "pracma", "testit"] + "depends": ["MASS", "compositions", "config", "data_table", "futile_logger", "matrixStats", "matrixcalc", "mgcv", "nloptr", "pbapply", "pracma", "testit"] }, "Unicode": { "name": "Unicode", @@ -35945,25 +36311,19 @@ "name": "UtilityFrailtyPH12", "version": "1.0", "sha256": "06f5gmwwk1r14ab6v5jcxz0pmdph7ffi4y57mjg9byn7pjnibflk", - "depends": ["bindata", "mvtnorm", "Phase123", "Rcpp", "RcppArmadillo"] + "depends": ["Phase123", "Rcpp", "RcppArmadillo", "bindata", "mvtnorm"] }, "V8": { "name": "V8", - "version": "4.4.2", - "sha256": "0w4n794l4f7hwwjr83112zf3cjx72q6ak0fn45qm6pqg8brkbg77", - "depends": ["curl", "jsonlite", "Rcpp"] - }, - "VAJointSurv": { - "name": "VAJointSurv", - "version": "0.1.0", - "sha256": "19ib4b1kf1zg4l571f2asxkwbab44pzs954agj0wx1p6kb2v608q", - "depends": ["lme4", "Matrix", "psqn", "Rcpp", "RcppArmadillo", "RcppEigen", "SimSurvNMarker", "survival", "testthat"] + "version": "5.0.0", + "sha256": "06mjjrwg9bgyfxn4gcj3bf4xc9ijx08xf8dfd8g6w0bkz5cvg3v6", + "depends": ["Rcpp", "curl", "jsonlite"] }, "VALERIE": { "name": "VALERIE", "version": "1.1.0", "sha256": "15z8234jhh7hv3gijrvy8hap6gdgvm6qll9b00qbji7vyc3dg4pg", - "depends": ["GenomicAlignments", "GenomicRanges", "ggplot2", "ggplotify", "ggpubr", "IRanges", "pheatmap", "plyr", "Rsamtools", "scales"] + "depends": ["GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "ggplot2", "ggplotify", "ggpubr", "pheatmap", "plyr", "scales"] }, "VALIDICLUST": { "name": "VALIDICLUST", @@ -35993,7 +36353,7 @@ "name": "VARDetect", "version": "0.1.8", "sha256": "1g28rcmlm16yiz156rmdslvhy173pazij0lw7b5gxqv3dgl4mcd0", - "depends": ["igraph", "lattice", "MTS", "mvtnorm", "pracma", "Rcpp", "RcppArmadillo", "sparsevar"] + "depends": ["MTS", "Rcpp", "RcppArmadillo", "igraph", "lattice", "mvtnorm", "pracma", "sparsevar"] }, "VARSELECTEXPOSURE": { "name": "VARSELECTEXPOSURE", @@ -36005,13 +36365,13 @@ "name": "VARshrink", "version": "0.3.1", "sha256": "09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl", - "depends": ["ars", "corpcor", "MASS", "mvtnorm", "strucchange", "vars"] + "depends": ["MASS", "ars", "corpcor", "mvtnorm", "strucchange", "vars"] }, "VBJM": { "name": "VBJM", "version": "0.1.0", "sha256": "0g7mmjba8pyfz92p7fgp9shpm9pclymacm45y3h6hlmsbpc7sh3p", - "depends": ["Matrix", "pracma", "Rcpp", "RcppArmadillo", "RcppEnsmallen", "statmod", "survival"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEnsmallen", "pracma", "statmod", "survival"] }, "VBLPCM": { "name": "VBLPCM", @@ -36047,13 +36407,13 @@ "name": "VC2copula", "version": "0.1.5", "sha256": "1kadz36cw12qipf25dqykm58hh775wk3aq793ckphl7y9vqpvl36", - "depends": ["copula", "VineCopula"] + "depends": ["VineCopula", "copula"] }, "VCA": { "name": "VCA", "version": "1.5.1", "sha256": "0bw951rkbxg6ccy1iqmaamx5fwa41c3pp8zyzk2njkcgi4w5b90m", - "depends": ["lme4", "Matrix", "numDeriv"] + "depends": ["Matrix", "lme4", "numDeriv"] }, "VDAP": { "name": "VDAP", @@ -36089,13 +36449,13 @@ "name": "VEwaningVariant", "version": "1.4", "sha256": "1fg44cy2i138b21y610bj64xjwwp96wilngy3rq89vsvkj40rird", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "survival"] }, "VFP": { "name": "VFP", "version": "1.4.1", "sha256": "14idww1vy695mp9v2h0nxqi6flmm41cr30i0yd2nwjsnriwqgzak", - "depends": ["gnm", "MASS", "VCA"] + "depends": ["MASS", "VCA", "gnm"] }, "VFS": { "name": "VFS", @@ -36125,7 +36485,7 @@ "name": "VIC5", "version": "0.2.6", "sha256": "1zkvzkras94gyc43b9j4bq4mpyg9l1idx2pdd8a728gmq1daky0k", - "depends": ["foreach", "lubridate", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "foreach", "lubridate"] }, "VIGoR": { "name": "VIGoR", @@ -36137,13 +36497,13 @@ "name": "VIM", "version": "6.2.2", "sha256": "1r0myxcx8y1a3fkf9ssk882f09snn2j6zilsygpld32hahn4k9xg", - "depends": ["car", "colorspace", "data_table", "e1071", "laeken", "magrittr", "MASS", "nnet", "ranger", "Rcpp", "robustbase", "sp", "vcd"] + "depends": ["MASS", "Rcpp", "car", "colorspace", "data_table", "e1071", "laeken", "magrittr", "nnet", "ranger", "robustbase", "sp", "vcd"] }, "VIMPS": { "name": "VIMPS", "version": "1.0", "sha256": "13r8g9k216fjsnw4ymqdsrx08z6rr2i3cwafrv1j93lgl0d3lnj4", - "depends": ["caret", "ggplot2", "knockoff", "ranger", "ROCR"] + "depends": ["ROCR", "caret", "ggplot2", "knockoff", "ranger"] }, "VIMean": { "name": "VIMean", @@ -36179,25 +36539,25 @@ "name": "VLTimeCausality", "version": "0.1.5", "sha256": "0pfgpl9xkwi0v0z1l58gb8s4gzz7r4k38270x8ifyk41l5vq8iwd", - "depends": ["dtw", "ggplot2", "RTransferEntropy", "tseries"] + "depends": ["RTransferEntropy", "dtw", "ggplot2", "tseries"] }, "VMDML": { "name": "VMDML", "version": "0.1.1", "sha256": "12n32wx3hcvw55rrcwkv501cjl4zrpgh4d7y4m1irgrpjfqk77x2", - "depends": ["e1071", "forecast", "nnfor", "randomForest", "VMDecomp"] + "depends": ["VMDecomp", "e1071", "forecast", "nnfor", "randomForest"] }, "VMDecomp": { "name": "VMDecomp", "version": "1.0.1", "sha256": "0iq2lj7n77qmryf95cjl2y869bhy6i0mx44qls7xc07g0qplwqx3", - "depends": ["data_table", "glue", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "glue"] }, "VOSONDash": { "name": "VOSONDash", "version": "0.5.7", "sha256": "1qivx5ddl9jsn6q6ic2w8jrczxlx23z087k5arfz2rixgj7rndyg", - "depends": ["data_table", "httpuv", "httr", "igraph", "lattice", "magrittr", "RColorBrewer", "shiny", "SnowballC", "systemfonts", "syuzhet", "textutils", "tm", "vosonSML", "wordcloud"] + "depends": ["RColorBrewer", "SnowballC", "data_table", "httpuv", "httr", "igraph", "lattice", "magrittr", "shiny", "systemfonts", "syuzhet", "textutils", "tm", "vosonSML", "wordcloud"] }, "VPdtw": { "name": "VPdtw", @@ -36209,7 +36569,7 @@ "name": "VSOLassoBag", "version": "0.99.1", "sha256": "1jmnm435x36jlhbzl7kgjiby7kb7yjhh013zdnnvf9pcjaallqn9", - "depends": ["ggplot2", "glmnet", "pbapply", "POT", "SummarizedExperiment", "survival"] + "depends": ["POT", "SummarizedExperiment", "ggplot2", "glmnet", "pbapply", "survival"] }, "VSURF": { "name": "VSURF", @@ -36227,7 +36587,7 @@ "name": "VUROCS", "version": "1.0", "sha256": "1r4hq7az50v7lbyx5w6b4zs2kwi5cypqn9k6ac4kr8jr3jlyanr3", - "depends": ["doParallel", "foreach", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach"] }, "VWPre": { "name": "VWPre", @@ -36269,13 +36629,13 @@ "name": "VarSelLCM", "version": "2.1.3.1", "sha256": "03rg7zh1cq55vfc0ak6j7crs4n7fnbsxz8nllmplklx8wm47krf5", - "depends": ["ggplot2", "mgcv", "Rcpp", "RcppArmadillo", "shiny"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "mgcv", "shiny"] }, "VariableScreening": { "name": "VariableScreening", "version": "0.2.1", "sha256": "0djfpv46fhc3x4jvmjr93lyh4fxfzzvyrs3wjncx3h0z0s9n6w45", - "depends": ["energy", "expm", "gee", "MASS"] + "depends": ["MASS", "energy", "expm", "gee"] }, "VarianceGamma": { "name": "VarianceGamma", @@ -36291,9 +36651,9 @@ }, "VeccTMVN": { "name": "VeccTMVN", - "version": "1.0.0", - "sha256": "1kyq2wgdc3gdg2c3j8j578yhkhiw9r7c6q1z4k2r2vhbakr4fg7f", - "depends": ["GpGp", "GPvecchia", "Matrix", "Rcpp", "RcppArmadillo", "TruncatedNormal", "truncnorm"] + "version": "1.1.0", + "sha256": "008r2fkp16l8sdyn6is0n0v7m8lvx0zn7c3jscd1gfdzkf82zb2a", + "depends": ["GPvecchia", "GpGp", "Matrix", "Rcpp", "RcppArmadillo", "TruncatedNormal", "nleqslv", "truncnorm"] }, "VectorCodeR": { "name": "VectorCodeR", @@ -36347,13 +36707,13 @@ "name": "ViSiElse", "version": "1.2.2", "sha256": "1ay09dahlqnfrgf4gl4s45a4ahrk2xliagxqz5h826w2vzsawqcc", - "depends": ["chron", "colorspace", "ggplot2", "Matrix", "reshape2", "stringr"] + "depends": ["Matrix", "chron", "colorspace", "ggplot2", "reshape2", "stringr"] }, "VicmapR": { "name": "VicmapR", "version": "0.2.3", "sha256": "0djv95l32nz6wwslwgn0v037fjbl3fz15vybn39c6g1iw9a2a46s", - "depends": ["cli", "curl", "DBI", "dbplyr", "dplyr", "glue", "httr", "kableExtra", "knitr", "leaflet", "lubridate", "magrittr", "mapview", "purrr", "rlang", "rvest", "sf", "stringr", "xml2"] + "depends": ["DBI", "cli", "curl", "dbplyr", "dplyr", "glue", "httr", "kableExtra", "knitr", "leaflet", "lubridate", "magrittr", "mapview", "purrr", "rlang", "rvest", "sf", "stringr", "xml2"] }, "Vicus": { "name": "Vicus", @@ -36371,7 +36731,7 @@ "name": "VineCopula", "version": "2.5.0", "sha256": "0s2v27i5cljvxzh3awpf3bcfbbghch0lphhghqnc7x51w1prxfai", - "depends": ["ADGofTest", "lattice", "MASS", "mvtnorm"] + "depends": ["ADGofTest", "MASS", "lattice", "mvtnorm"] }, "VirtualPop": { "name": "VirtualPop", @@ -36387,9 +36747,9 @@ }, "VisitorCounts": { "name": "VisitorCounts", - "version": "2.0.0", - "sha256": "1i43g2k3n3c1baxj8q86v33mvvmcg16vv2a46y4ji5nqnqay7183", - "depends": ["ggplot2", "Rssa"] + "version": "2.0.2", + "sha256": "0iaik54zcq0vxfzfdgq90lxrr1b1824q5zicbpbczm4dxlc17q2q", + "depends": ["Rssa", "ggplot2", "zoo"] }, "VisualDom": { "name": "VisualDom", @@ -36425,13 +36785,19 @@ "name": "VoxR", "version": "1.0.0", "sha256": "16r9ggc5x889g8rjqvp1q2kgf5asjzhykd1ldjy3ny9m48p501ad", - "depends": ["circular", "data_table", "dplyr", "fastcluster", "FNN", "geometry", "raster", "Rfast", "rgl"] + "depends": ["FNN", "Rfast", "circular", "data_table", "dplyr", "fastcluster", "geometry", "raster", "rgl"] + }, + "VsusP": { + "name": "VsusP", + "version": "1.0.0", + "sha256": "1nrs94gyxc2ldihnn28wijigfs13ipigcvkycnxnzd60hg5j8c7i", + "depends": ["bayesreg"] }, "VulnToolkit": { "name": "VulnToolkit", "version": "1.1.4", "sha256": "01m8spmd4na7mxgnplnnq3n4pab9349z2dk44b455vcadll0fsdi", - "depends": ["plyr", "XML"] + "depends": ["XML", "plyr"] }, "W2CWM2C": { "name": "W2CWM2C", @@ -36465,8 +36831,8 @@ }, "WALS": { "name": "WALS", - "version": "0.2.4", - "sha256": "0pqvmdvgxrf05avkgynx2hwqp6k3a3vhhiis5vwijz9ccjgac0kz", + "version": "0.2.5", + "sha256": "0z3863ml85065w23m6wr4hd5a0vdaiavpmrbal8kz4igj6j34ff6", "depends": ["Formula", "MASS", "Rdpack"] }, "WARN": { @@ -36477,9 +36843,9 @@ }, "WASP": { "name": "WASP", - "version": "1.4.3", - "sha256": "1w822wl8zp94a60y9jsryc1r1m025pl2100fx5i8np46mm3pmn58", - "depends": ["ggplot2", "rlang", "sp", "tidyr", "waveslim"] + "version": "1.4.4", + "sha256": "1jjas0qklb3dyax4x26c327l59biyym5m2x6mv8z7dnkyfrw3vfq", + "depends": ["fitdistrplus", "ggplot2", "readr", "sp", "tidyr", "waveslim", "zoo"] }, "WCE": { "name": "WCE", @@ -36511,17 +36877,23 @@ "sha256": "17g4cgx0ajgj7lgxzi467cjbmbc47skyarcm88vqjc3i1j55dw12", "depends": ["raster", "sf", "sp"] }, + "WES": { + "name": "WES", + "version": "1.0.0", + "sha256": "11dsn0dkc0z313x8md6qhkafk9cnbp4v64a895d54b27329ryzis", + "depends": ["HDInterval", "RCurl", "XML", "chirps", "data_table", "dplyr", "elevatr", "exactextractr", "foreach", "glue", "httr", "jsonlite", "openmeteo", "raster", "rworldmap", "sf", "sp", "stars", "whitebox", "zoo"] + }, "WGCNA": { "name": "WGCNA", "version": "1.72-5", "sha256": "17g7lan1rpy6y4nmqksrf9ddp3gs58vdczfavgq1fp13zx1r2hq3", - "depends": ["AnnotationDbi", "doParallel", "dynamicTreeCut", "fastcluster", "foreach", "GO_db", "Hmisc", "impute", "matrixStats", "preprocessCore", "Rcpp", "survival"] + "depends": ["AnnotationDbi", "GO_db", "Hmisc", "Rcpp", "doParallel", "dynamicTreeCut", "fastcluster", "foreach", "impute", "matrixStats", "preprocessCore", "survival"] }, "WGScan": { "name": "WGScan", "version": "0.1", "sha256": "0jma6di9hbdimswdfm58568vahcjy46hbhb78idjsdz4bl9apvq3", - "depends": ["data_table", "MASS", "Matrix", "seqminer", "SKAT"] + "depends": ["MASS", "Matrix", "SKAT", "data_table", "seqminer"] }, "WH": { "name": "WH", @@ -36539,7 +36911,7 @@ "name": "WLogit", "version": "2.1", "sha256": "06mhc6n9mszqrj9hi61z5yfyny5aqsvv11a5n7l0wwhpirgi3i8m", - "depends": ["corpcor", "cvCovEst", "genlasso", "ggplot2", "glmnet", "MASS", "Matrix", "tibble"] + "depends": ["MASS", "Matrix", "corpcor", "cvCovEst", "genlasso", "ggplot2", "glmnet", "tibble"] }, "WLreg": { "name": "WLreg", @@ -36575,7 +36947,7 @@ "name": "WRI", "version": "0.2.0", "sha256": "1hm23p0b4k03dxrbia9kq6r3n2c57glllraglxrj2vgnvwn6sl2c", - "depends": ["CVXR", "expm", "fdadensity", "fdapace", "ggplot2", "gridExtra", "locfit", "locpol", "modeest", "mvtnorm", "polynom", "Rcpp", "RcppArmadillo", "Rfast", "rlang"] + "depends": ["CVXR", "Rcpp", "RcppArmadillo", "Rfast", "expm", "fdadensity", "fdapace", "ggplot2", "gridExtra", "locfit", "locpol", "modeest", "mvtnorm", "polynom", "rlang"] }, "WRS2": { "name": "WRS2", @@ -36587,13 +36959,13 @@ "name": "WRSS", "version": "3.1", "sha256": "0fhmdnkk94m1bqm1i69szv3ycbkzr08xy30mwpqvbij9nh2sqj0w", - "depends": ["GGally", "ggplot2", "Hmisc", "network", "nloptr"] + "depends": ["GGally", "Hmisc", "ggplot2", "network", "nloptr"] }, "WRTDStidal": { "name": "WRTDStidal", "version": "1.1.4", "sha256": "1clv6gd0qlkykllki5jkmhd1znrccyg1mv6w69wz8fj65b2466zd", - "depends": ["caret", "dplyr", "fields", "foreach", "forecast", "ggplot2", "gridExtra", "lubridate", "purrr", "quantreg", "RColorBrewer", "survival", "tidyr"] + "depends": ["RColorBrewer", "caret", "dplyr", "fields", "foreach", "forecast", "ggplot2", "gridExtra", "lubridate", "purrr", "quantreg", "survival", "tidyr"] }, "WRestimates": { "name": "WRestimates", @@ -36629,7 +37001,7 @@ "name": "Wats", "version": "1.0.1", "sha256": "0xld5163srlyqd9rbmi618drkrimys7ifgzrq05ky22ns2qa4qfv", - "depends": ["colorspace", "dplyr", "ggplot2", "lubridate", "RColorBrewer", "rlang", "testit", "tibble", "zoo"] + "depends": ["RColorBrewer", "colorspace", "dplyr", "ggplot2", "lubridate", "rlang", "testit", "tibble", "zoo"] }, "WaveSampling": { "name": "WaveSampling", @@ -36641,7 +37013,7 @@ "name": "WaveletANN", "version": "0.1.2", "sha256": "1j16jsnz9j735348a5ybgrl7p6bg45gwwp863y4pg85h4mwg37c9", - "depends": ["forecast", "fracdiff", "Metrics", "wavelets"] + "depends": ["Metrics", "forecast", "fracdiff", "wavelets"] }, "WaveletArima": { "name": "WaveletArima", @@ -36659,7 +37031,7 @@ "name": "WaveletETS", "version": "0.1.0", "sha256": "1cxzhmyhvq7ip32csqlxzfxx6gxnwn49vvm8xx3idal4nkdlids1", - "depends": ["caretForecast", "dplyr", "forecast", "Metrics", "tseries", "wavelets"] + "depends": ["Metrics", "caretForecast", "dplyr", "forecast", "tseries", "wavelets"] }, "WaveletGARCH": { "name": "WaveletGARCH", @@ -36671,25 +37043,25 @@ "name": "WaveletGBM", "version": "0.1.0", "sha256": "0jilj6mgq6wb6a5zb4j9backfgyf38w687ppbyfsz40263srj081", - "depends": ["caret", "caretForecast", "dplyr", "gbm", "Metrics", "tseries", "wavelets"] + "depends": ["Metrics", "caret", "caretForecast", "dplyr", "gbm", "tseries", "wavelets"] }, "WaveletKNN": { "name": "WaveletKNN", "version": "0.1.0", "sha256": "1pr2w74r9qrbwdhacqa4xbyk5xd33sk208slgaq4dydbx3ndh5wp", - "depends": ["caret", "caretForecast", "dplyr", "Metrics", "tseries", "wavelets"] + "depends": ["Metrics", "caret", "caretForecast", "dplyr", "tseries", "wavelets"] }, "WaveletLSTM": { "name": "WaveletLSTM", "version": "0.1.0", "sha256": "1imf51ihwhzga6xscqh5lawyrx3smk6czxpmyahxgd696xg70c1q", - "depends": ["caret", "caretForecast", "dplyr", "tseries", "TSLSTM", "wavelets"] + "depends": ["TSLSTM", "caret", "caretForecast", "dplyr", "tseries", "wavelets"] }, "WaveletML": { "name": "WaveletML", "version": "0.1.0", "sha256": "0y3aclnrjk3zhw3ls00iwjif1ghdnfjhhglf37kr7f7alqbqg0ax", - "depends": ["aTSA", "caret", "e1071", "earth", "fGarch", "FinTS", "forecast", "LSTS", "neuralnet", "pso", "tseries", "wavelets"] + "depends": ["FinTS", "LSTS", "aTSA", "caret", "e1071", "earth", "fGarch", "forecast", "neuralnet", "pso", "tseries", "wavelets"] }, "WaveletMLbestFL": { "name": "WaveletMLbestFL", @@ -36713,19 +37085,19 @@ "name": "WaverR", "version": "1.0", "sha256": "084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a", - "depends": ["kimisc", "MASS"] + "depends": ["MASS", "kimisc"] }, "WaverideR": { "name": "WaverideR", "version": "0.3.2", "sha256": "1lm7xq443vninrph21xq6dikpd42xl9ilwfb22lfba2b7j7j5z6g", - "depends": ["astrochron", "biwavelet", "colorednoise", "colorRamps", "DecomposeR", "DescTools", "doSNOW", "fANCOVA", "foreach", "Hmisc", "magick", "Matrix", "matrixStats", "RColorBrewer", "reshape2", "rlist", "truncnorm", "viridis", "WaveletComp"] + "depends": ["DecomposeR", "DescTools", "Hmisc", "Matrix", "RColorBrewer", "WaveletComp", "astrochron", "biwavelet", "colorRamps", "colorednoise", "doSNOW", "fANCOVA", "foreach", "magick", "matrixStats", "reshape2", "rlist", "truncnorm", "viridis"] }, "WayFindR": { "name": "WayFindR", "version": "0.1.2", "sha256": "1j54374vk8y2f28lka03qwz5hyvpb0fyrbfn20pj1hbbnvymsxrm", - "depends": ["igraph", "XML"] + "depends": ["XML", "igraph"] }, "Wcompo": { "name": "Wcompo", @@ -36737,7 +37109,7 @@ "name": "WeMix", "version": "4.0.3", "sha256": "1ykg7sphnm15a3dlkkhv18ycsclaw363yldfsyc83hf01vlghf77", - "depends": ["lme4", "Matrix", "matrixStats", "minqa", "numDeriv"] + "depends": ["Matrix", "lme4", "matrixStats", "minqa", "numDeriv"] }, "WebAnalytics": { "name": "WebAnalytics", @@ -36749,19 +37121,19 @@ "name": "WebGestaltR", "version": "0.4.6", "sha256": "1xwadw9maj3n9yxm4bv63hx4x1lh6krqhfcnwn2ay6jgwh7y6zxw", - "depends": ["apcluster", "doParallel", "doRNG", "dplyr", "foreach", "httr", "igraph", "jsonlite", "Rcpp", "readr", "rlang", "svglite", "whisker"] + "depends": ["Rcpp", "apcluster", "doParallel", "doRNG", "dplyr", "foreach", "httr", "igraph", "jsonlite", "readr", "rlang", "svglite", "whisker"] }, "WebPower": { "name": "WebPower", "version": "0.9.4", "sha256": "0idfm9mr4sffyzyihggy5kmsklx178g8c5ikp34kxz74jkz0rzn5", - "depends": ["dplyr", "lavaan", "lme4", "MASS", "PearsonDS"] + "depends": ["MASS", "PearsonDS", "dplyr", "lavaan", "lme4"] }, "WeibullFit": { "name": "WeibullFit", "version": "0.1.0", "sha256": "1a80gcqbmvb1rz2dr2syy16wn6ixjn6l40gayys9zy8302hky9ir", - "depends": ["e1071", "FAdist", "glue", "kSamples", "mixdist", "optimx", "R_methodsS3", "R_oo", "sqldf", "xtable"] + "depends": ["FAdist", "R_methodsS3", "R_oo", "e1071", "glue", "kSamples", "mixdist", "optimx", "sqldf", "xtable"] }, "WeibullR": { "name": "WeibullR", @@ -36777,27 +37149,27 @@ }, "WeibullR_learnr": { "name": "WeibullR.learnr", - "version": "0.1.1", - "sha256": "0m3dajyxr6m2w8s1qlwfr1iq2x2s5khs9x1qj4r4fr6zqhp53pbx", - "depends": ["learnr", "WeibullR"] + "version": "0.1.3", + "sha256": "14v64jr4z8j9gv4qqpwk013d6rjc5g3yisqn8lkibccgb78ifdxn", + "depends": ["WeibullR", "learnr"] }, "WeibullR_plotly": { "name": "WeibullR.plotly", - "version": "0.2.0", - "sha256": "1ymggxqhn2bc6r25vzp4vlr18pcw9vnn24ylwspk8vq8j00pn197", - "depends": ["plotly", "WeibullR"] + "version": "0.2.1", + "sha256": "1hhcr31kn3bcaj562x8hdh5gg7nkmwcbish8yq4faj9bhrm0lg6h", + "depends": ["WeibullR", "plotly"] }, "WeibullR_shiny": { "name": "WeibullR.shiny", - "version": "0.2.0", - "sha256": "0qzwn967p54j03h9nmzljx547iqgnyq3xzfri5k0i5lpvxsdp7hs", - "depends": ["shiny", "shinydashboard", "WeibullR", "WeibullR_plotly"] + "version": "0.2.1", + "sha256": "0p4vsc153x96w73bg9s0bcnfnk70qmfi9n2d57vcw0z4ppm1gdr4", + "depends": ["WeibullR", "WeibullR_plotly", "shiny", "shinydashboard"] }, "WeightIt": { "name": "WeightIt", - "version": "1.1.0", - "sha256": "00p5ylc0jahb8dqc2z7x5kvx40rlbvrrpfpfhg0dxyrd6qas71w5", - "depends": ["chk", "cobalt", "crayon", "ggplot2", "rlang"] + "version": "1.2.0", + "sha256": "0mgwjl2d17m80pwj0n2mmnrqcymg9lgc9kz0sh9bwsq7icjdslyv", + "depends": ["chk", "cobalt", "crayon", "generics", "ggplot2", "rlang"] }, "WeightSVM": { "name": "WeightSVM", @@ -36815,7 +37187,7 @@ "name": "WeightedCluster", "version": "1.6-4", "sha256": "1ayi50wjy7grzapfnyvmbi6rz7amfhdd1nxh56h1s4anv7rf20c4", - "depends": ["cluster", "doFuture", "foreach", "future", "nnet", "progressr", "RColorBrewer", "TraMineR"] + "depends": ["RColorBrewer", "TraMineR", "cluster", "doFuture", "foreach", "future", "nnet", "progressr"] }, "WeightedEnsemble": { "name": "WeightedEnsemble", @@ -36839,7 +37211,7 @@ "name": "WeightedTreemaps", "version": "0.1.2", "sha256": "1jbbf915jny6lpbhv4m0grkadgjmw7vh1izql4kdbn3w5p5j8m1x", - "depends": ["BH", "colorspace", "dplyr", "lattice", "Rcpp", "RcppCGAL", "scales", "sf", "sp", "tibble"] + "depends": ["BH", "Rcpp", "RcppCGAL", "colorspace", "dplyr", "lattice", "scales", "sf", "sp", "tibble"] }, "WgtEff": { "name": "WgtEff", @@ -36859,6 +37231,12 @@ "sha256": "0i6mhc3cm7m885v5sznci7bqr6h2bfgnv466v5jwdwidisnzrhgx", "depends": ["anytime", "checkmate", "data_table", "dplyr", "ggmap", "ggplot2", "ggwordcloud", "lubridate", "mgsub", "qdap", "qdapRegex", "ragg", "readr", "stringi", "tokenizers", "visNetwork"] }, + "WhiteLabRt": { + "name": "WhiteLabRt", + "version": "1.0.1", + "sha256": "05vdk83xxyphhhyfcb01kscr0gwxrd01yjwlpr4afxh6ppbgvx6v", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] + }, "WhiteStripe": { "name": "WhiteStripe", "version": "2.4.3", @@ -36875,13 +37253,13 @@ "name": "WikidataQueryServiceR", "version": "1.0.0", "sha256": "1bl1nbhbmss8cj9ni7plsjs996n4rwqv6h8bh1zj4whs8z4fw50f", - "depends": ["dplyr", "httr", "jsonlite", "purrr", "ratelimitr", "readr", "rex", "WikipediR"] + "depends": ["WikipediR", "dplyr", "httr", "jsonlite", "purrr", "ratelimitr", "readr", "rex"] }, "WikidataR": { "name": "WikidataR", "version": "2.3.3", "sha256": "120833b7zyq1rhmn9c8iv0j6br60af7gbn5lc4dil55qhh2lp9rx", - "depends": ["crayon", "dplyr", "Hmisc", "httr", "jsonlite", "pbapply", "progress", "readr", "stringr", "tibble", "WikidataQueryServiceR", "WikipediR"] + "depends": ["Hmisc", "WikidataQueryServiceR", "WikipediR", "crayon", "dplyr", "httr", "jsonlite", "pbapply", "progress", "readr", "stringr", "tibble"] }, "WikipediR": { "name": "WikipediR", @@ -36893,7 +37271,7 @@ "name": "WinRatio", "version": "1.0", "sha256": "0d064qq9zad9bdacldhicj3xhyrvp0fcqrxfj594yzra2qwgkx90", - "depends": ["dplyr", "magrittr", "Rcpp", "tidyselect", "tidyverse"] + "depends": ["Rcpp", "dplyr", "magrittr", "tidyselect", "tidyverse"] }, "WindCurves": { "name": "WindCurves", @@ -36915,8 +37293,8 @@ }, "WordListsAnalytics": { "name": "WordListsAnalytics", - "version": "0.2.2", - "sha256": "1q4plzw4akm7dw59qbwwnd0dxzjiqfbpiqa9h967kvdqdalwkjzz", + "version": "0.2.3", + "sha256": "0vw354gldqawxa1xw6abf76yh8r6jgfsc8vrppl5arj4kw72zrya", "depends": ["dplyr", "ggplot2", "readr", "reshape2", "shiny"] }, "WordOfMouth": { @@ -36951,15 +37329,15 @@ }, "WormTensor": { "name": "WormTensor", - "version": "0.1.0", - "sha256": "0l55dbcf65cpw03b26va4ssvk3wc0i6hnchb9jyw44369y5xfniy", - "depends": ["aricode", "cluster", "clusterSim", "clValid", "cowplot", "dtwclust", "factoextra", "ggplot2", "ggrepel", "rTensor", "Rtsne", "usedist", "uwot"] + "version": "0.1.1", + "sha256": "1xnjp6m3h0q6phmn2c2wkbjzyl8lpx07jsryz0i8rxr6ny591ja2", + "depends": ["Rtsne", "aricode", "clValid", "cluster", "clusterSim", "cowplot", "dtwclust", "factoextra", "ggplot2", "ggrepel", "rTensor", "usedist", "uwot"] }, "WpProj": { "name": "WpProj", "version": "0.2.1", "sha256": "17vczldqgqc8wl6yyz06zc3jdkgcxdf2s28bh83vzj98i1521ls2", - "depends": ["BH", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "ggridges", "ggsci", "glmnet", "lifecycle", "magrittr", "Matrix", "oem", "quantreg", "Rcpp", "RcppCGAL", "RcppEigen", "RcppProgress", "rlang", "ROI", "ROI_plugin_ecos", "ROI_plugin_lpsolve", "rqPen", "RSpectra", "slam"] + "depends": ["BH", "Matrix", "ROI", "ROI_plugin_ecos", "ROI_plugin_lpsolve", "RSpectra", "Rcpp", "RcppCGAL", "RcppEigen", "RcppProgress", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "ggridges", "ggsci", "glmnet", "lifecycle", "magrittr", "oem", "quantreg", "rlang", "rqPen", "slam"] }, "WrensBookshelf": { "name": "WrensBookshelf", @@ -36975,8 +37353,8 @@ }, "WriteXLS": { "name": "WriteXLS", - "version": "6.6.0", - "sha256": "0adpwd80hhw6i965wp1w74s85vzq2gv5pf98zcvjwaqvpkrs25xw", + "version": "6.7.0", + "sha256": "0vr6h7jycwiic02krgz0ignzqhpi3vc9gsa5cykvg8wxdsfyyb6k", "depends": [] }, "WtTopsis": { @@ -37023,15 +37401,15 @@ }, "XML": { "name": "XML", - "version": "3.99-0.16.1", - "sha256": "1i7fs9i2f6bdkxb45w2bck7sshlwxy2s32hi9fwa4nfmw2iy62m3", + "version": "3.99-0.17", + "sha256": "1n52k06jrgyjmz96mv4sv6kczqkhmz2spr3gymcjzzv9zxjk48vf", "depends": [] }, "XML2R": { "name": "XML2R", "version": "0.0.8", "sha256": "1vssxy5bn46likkba8ycajkni14s7js31255swflr8007mc3pwmz", - "depends": ["httr", "plyr", "XML"] + "depends": ["XML", "httr", "plyr"] }, "XNomial": { "name": "XNomial", @@ -37055,7 +37433,7 @@ "name": "XRPython", "version": "0.8", "sha256": "0alg33spiaqf3jwg1qn543nxvbfaqv8gvf5px3grhbgrcmi5mcmj", - "depends": ["reticulate", "XR"] + "depends": ["XR", "reticulate"] }, "XRSCC": { "name": "XRSCC", @@ -37065,21 +37443,21 @@ }, "XiMpLe": { "name": "XiMpLe", - "version": "0.11-2", - "sha256": "0pa06jm9g308pbh8bal7mjaiwbsjbdsxiyvm0f01405j3wkf64m3", + "version": "0.11-3", + "sha256": "1hpy1yls4hhlbf2hjyfjqrxcrcpbakk4irqzl795rarzm790hgfq", "depends": [] }, "Xplortext": { "name": "Xplortext", "version": "1.5.3", "sha256": "1pmynw9zxfflzhw3iqf1gfv0c3fz2nj308hxzwjgpcds7fm2sqzm", - "depends": ["FactoMineR", "flashClust", "flexclust", "ggdendro", "ggforce", "ggplot2", "ggrepel", "gridExtra", "MASS", "plotly", "slam", "stringi", "stringr", "tm", "vegan"] + "depends": ["FactoMineR", "MASS", "flashClust", "flexclust", "ggdendro", "ggforce", "ggplot2", "ggrepel", "gridExtra", "plotly", "slam", "stringi", "stringr", "tm", "vegan"] }, "YPBP": { "name": "YPBP", "version": "0.0.1", "sha256": "1slc7glr4hb0my5zkssprngb6si98npjj33nsbsm0nbm61hnb9n8", - "depends": ["BH", "Formula", "MASS", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "survival"] + "depends": ["BH", "Formula", "MASS", "Rcpp", "RcppEigen", "StanHeaders", "rstan", "rstantools", "survival"] }, "YPInterimTesting": { "name": "YPInterimTesting", @@ -37091,7 +37469,7 @@ "name": "YPPE", "version": "1.0.1", "sha256": "01q0l22nwfpld2wcygk5x28c2c6cv35hxy2fm1azn8bqsv7xy5il", - "depends": ["BH", "Formula", "MASS", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "survival"] + "depends": ["BH", "Formula", "MASS", "Rcpp", "RcppEigen", "StanHeaders", "rstan", "rstantools", "survival"] }, "YPmodel": { "name": "YPmodel", @@ -37125,9 +37503,9 @@ }, "YatchewTest": { "name": "YatchewTest", - "version": "1.1.0", - "sha256": "13ni502538l76cxyjh3q35id117i64m8bg9zp7g1199ln2csms7h", - "depends": ["ggplot2", "Rcpp"] + "version": "1.1.1", + "sha256": "1m951cin2wlxrmg5k7b6zjmfyc5frxgzr4aibyj4lh9vbr9hlqk8", + "depends": ["Rcpp", "ggplot2"] }, "YatesAlgo_FactorialExp_SR": { "name": "YatesAlgo.FactorialExp.SR", @@ -37169,7 +37547,7 @@ "name": "ZINAR1", "version": "0.1.0", "sha256": "1didfjb4215k9q82n1vaqln6f7fszsycsflydak2zl7xwficwhy6", - "depends": ["gamlss_dist", "gtools", "MASS", "scales", "statmod", "VGAM"] + "depends": ["MASS", "VGAM", "gamlss_dist", "gtools", "scales", "statmod"] }, "ZINARp": { "name": "ZINARp", @@ -37187,7 +37565,7 @@ "name": "ZIPFA", "version": "0.8.1", "sha256": "134pkdn4slhiv27rdkkmh2z7xch30ns0jhzxgd7r05bky0z1iri1", - "depends": ["doParallel", "foreach", "Matrix", "optimx", "trustOptim"] + "depends": ["Matrix", "doParallel", "foreach", "optimx", "trustOptim"] }, "ZIPG": { "name": "ZIPG", @@ -37217,7 +37595,7 @@ "name": "ZVCV", "version": "2.1.2", "sha256": "0ws0v7i6r7skb8lv6j718k29v5qsy1b007jxidv81iv0jcz9zfpy", - "depends": ["abind", "BH", "dplyr", "glmnet", "magrittr", "mvtnorm", "Rcpp", "RcppArmadillo", "Rlinsolve"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "Rlinsolve", "abind", "dplyr", "glmnet", "magrittr", "mvtnorm"] }, "ZeBook": { "name": "ZeBook", @@ -37229,7 +37607,7 @@ "name": "ZetaSuite", "version": "1.0.1", "sha256": "10b0acz88vc80x49wwv581abym75wswi4z92mnl4xn0vw62vjpqa", - "depends": ["dplyr", "e1071", "ggplot2", "gridExtra", "mixtools", "RColorBrewer", "reshape2", "Rtsne"] + "depends": ["RColorBrewer", "Rtsne", "dplyr", "e1071", "ggplot2", "gridExtra", "mixtools", "reshape2"] }, "ZillowR": { "name": "ZillowR", @@ -37255,17 +37633,23 @@ "sha256": "1w2rvw1kc4a9b2mi3bh10siv3j89xb3qrx7nydw4kqrgi5c4v3i4", "depends": ["ALDEx2", "edgeR", "matrixcalc", "shiny", "vegan", "zCompositions"] }, + "aLBI": { + "name": "aLBI", + "version": "0.1.5", + "sha256": "03xh0m6nn81sig20p3k24zx131fmi9q5wqx2d4qjlx0wzrmf36px", + "depends": [] + }, "aLFQ": { "name": "aLFQ", "version": "1.3.6", "sha256": "0kphpvhz36859f5l0k8mbf59g9871mynbs4ybdi0h5nm2cdjy9vx", - "depends": ["bio3d", "caret", "data_table", "lattice", "plyr", "randomForest", "reshape2", "ROCR", "seqinr"] + "depends": ["ROCR", "bio3d", "caret", "data_table", "lattice", "plyr", "randomForest", "reshape2", "seqinr"] }, "aMNLFA": { "name": "aMNLFA", "version": "1.1.2", "sha256": "1bks7g6zc8817gr4j1mxzmyhw23mwafb6816a26vylk8d9k9d315", - "depends": ["devtools", "dplyr", "ggplot2", "gridExtra", "MplusAutomation", "plyr", "reshape2", "stringi", "stringr"] + "depends": ["MplusAutomation", "devtools", "dplyr", "ggplot2", "gridExtra", "plyr", "reshape2", "stringi", "stringr"] }, "aPCoA": { "name": "aPCoA", @@ -37277,7 +37661,7 @@ "name": "aPEAR", "version": "1.0.0", "sha256": "08rlfcwwrdy8zz102p67zk4zazjjs7wb08y3kyljn2ps82hmwi19", - "depends": ["arules", "bayesbio", "data_table", "dplyr", "ggforce", "ggplot2", "ggrepel", "igraph", "lsa", "MCL", "reshape2", "tibble"] + "depends": ["MCL", "arules", "bayesbio", "data_table", "dplyr", "ggforce", "ggplot2", "ggrepel", "igraph", "lsa", "reshape2", "tibble"] }, "aRpsDCA": { "name": "aRpsDCA", @@ -37289,19 +37673,19 @@ "name": "aRtsy", "version": "0.2.4", "sha256": "08982646gd7m0f7zcj31jq7wmjh0lrl2gys5ma6v6ikqq06piy0c", - "depends": ["ambient", "e1071", "ggplot2", "kknn", "randomForest", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "ambient", "e1071", "ggplot2", "kknn", "randomForest", "scales"] }, "aRxiv": { "name": "aRxiv", "version": "0.10", "sha256": "0fm22lcifq2lmbv2il0jkkp7b426924vwph7yrcqprvlvb3g33id", - "depends": ["httr", "XML"] + "depends": ["XML", "httr"] }, "aSPU": { "name": "aSPU", "version": "1.50", "sha256": "0rh21dj5913nxhdndqfhxvm6mvwnacraf7l3bac09awm7cfhk511", - "depends": ["fields", "gee", "MASS", "matrixStats", "mvtnorm"] + "depends": ["MASS", "fields", "gee", "matrixStats", "mvtnorm"] }, "aTSA": { "name": "aTSA", @@ -37331,7 +37715,7 @@ "name": "abc", "version": "2.2.1", "sha256": "16753lyzk2dfwgdjfyanwacqw3bvrwby52inq4709804labs6lnv", - "depends": ["abc_data", "locfit", "MASS", "nnet", "quantreg"] + "depends": ["MASS", "abc_data", "locfit", "nnet", "quantreg"] }, "abc_data": { "name": "abc.data", @@ -37349,7 +37733,7 @@ "name": "abcrf", "version": "1.9", "sha256": "08mh1a6gxp0mfx6qnp1qzcrfx7xp64qj9kad4ziyswfx22ykdsxi", - "depends": ["doParallel", "foreach", "MASS", "matrixStats", "ranger", "Rcpp", "RcppArmadillo", "readr", "stringr"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "matrixStats", "ranger", "readr", "stringr"] }, "abcrlda": { "name": "abcrlda", @@ -37361,7 +37745,7 @@ "name": "abctools", "version": "1.1.7", "sha256": "16gn5hk25glbjml7bclxqkybi90gqjijz6hl6ak8aig5wm08pgx2", - "depends": ["abc", "abind", "Hmisc", "plyr"] + "depends": ["Hmisc", "abc", "abind", "plyr"] }, "abd": { "name": "abd", @@ -37383,8 +37767,8 @@ }, "aberrance": { "name": "aberrance", - "version": "0.1.0", - "sha256": "0wjckww2dc3q17ln4r0sjgbvi5zxbsh5cz383x02xkkq5va7lrb3", + "version": "0.1.1", + "sha256": "0rpmapx5ji69hfszbhrhvjmn5i6a4jdgy0g11w59xdsrpzc40sv8", "depends": ["MASS"] }, "abess": { @@ -37433,7 +37817,7 @@ "name": "abn", "version": "3.1.1", "sha256": "1sixgahjcy82yiiixgxiqbm8jcajqz0m3h0hwwm202iwzi3vyhiv", - "depends": ["doParallel", "foreach", "graph", "lme4", "mclogit", "nnet", "Rcpp", "RcppArmadillo", "Rgraphviz", "rjags", "stringi"] + "depends": ["Rcpp", "RcppArmadillo", "Rgraphviz", "doParallel", "foreach", "graph", "lme4", "mclogit", "nnet", "rjags", "stringi"] }, "abnormality": { "name": "abnormality", @@ -37457,7 +37841,7 @@ "name": "absorber", "version": "1.0", "sha256": "1s8dn0y0igxaxa1q6cakc28fb1dvf0zljmw7gbn68pdimyrvdh0g", - "depends": ["fda", "ggplot2", "irlba", "MASS", "Matrix", "sparsegl"] + "depends": ["MASS", "Matrix", "fda", "ggplot2", "irlba", "sparsegl"] }, "abstr": { "name": "abstr", @@ -37475,7 +37859,7 @@ "name": "abtest", "version": "1.0.1", "sha256": "0jz2ry5364p8h8xlk5a5sycn8xlpxd1iasfg99bcr4jqzd92jfqg", - "depends": ["Matrix", "mvtnorm", "plotrix", "qgam", "RColorBrewer", "Rcpp", "sn", "truncnorm"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "mvtnorm", "plotrix", "qgam", "sn", "truncnorm"] }, "abundant": { "name": "abundant", @@ -37493,13 +37877,13 @@ "name": "acc", "version": "1.3.3", "sha256": "1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m", - "depends": ["circlize", "DBI", "ggplot2", "iterators", "mhsmm", "nleqslv", "PhysicalActivity", "plyr", "R_utils", "Rcpp", "RcppArmadillo", "RSQLite", "zoo"] + "depends": ["DBI", "PhysicalActivity", "RSQLite", "R_utils", "Rcpp", "RcppArmadillo", "circlize", "ggplot2", "iterators", "mhsmm", "nleqslv", "plyr", "zoo"] }, "accSDA": { "name": "accSDA", "version": "1.1.3", "sha256": "1s0c4wy4bzrc2fkka7kl519z1yckp6s4ggzy1ik992ygyprdcs1q", - "depends": ["ggplot2", "gridExtra", "MASS"] + "depends": ["MASS", "ggplot2", "gridExtra"] }, "acca": { "name": "acca", @@ -37511,7 +37895,7 @@ "name": "accelerometry", "version": "3.1.2", "sha256": "13xzrwhr4i1nj9c8vrmfdg2rmrc8n446iihcyxmy99sm99hpzyip", - "depends": ["dvmisc", "Rcpp"] + "depends": ["Rcpp", "dvmisc"] }, "accelmissing": { "name": "accelmissing", @@ -37529,7 +37913,7 @@ "name": "accessibility", "version": "1.4.0", "sha256": "0c130kbh3h42pj0iw4zb9kv1i8zmy12znyhxbb5cvr8lwgkzdc4n", - "depends": ["checkmate", "data_table", "Hmisc", "Rdpack"] + "depends": ["Hmisc", "Rdpack", "checkmate", "data_table"] }, "accessr": { "name": "accessr", @@ -37541,13 +37925,13 @@ "name": "accessrmd", "version": "1.0.0", "sha256": "1jdbbsi8nzvr8hnrpw5sr8zf55irnwwrnkwx4vd0zx84bxvw3bqy", - "depends": ["ggplot2", "htmltools", "knitr", "RCurl", "rlist", "stringr"] + "depends": ["RCurl", "ggplot2", "htmltools", "knitr", "rlist", "stringr"] }, "accrual": { "name": "accrual", "version": "1.4", "sha256": "0dygp8xar6dqx822ghjqvi8c597xjb7bqn57475fs4nw5zz709lk", - "depends": ["fgui", "SMPracticals", "tcltk2"] + "depends": ["SMPracticals", "fgui", "tcltk2"] }, "accrualPlot": { "name": "accrualPlot", @@ -37595,7 +37979,7 @@ "name": "acebayes", "version": "1.10", "sha256": "11bffz430gdfdaxjx3simig66vhynmx6l1ylac4q2shcmj52nx73", - "depends": ["compare", "lhs", "randtoolbox", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "compare", "lhs", "randtoolbox"] }, "acepack": { "name": "acepack", @@ -37613,7 +37997,7 @@ "name": "acid", "version": "1.1", "sha256": "030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd", - "depends": ["gamlss", "gamlss_dist", "Hmisc"] + "depends": ["Hmisc", "gamlss", "gamlss_dist"] }, "acled_api": { "name": "acled.api", @@ -37649,13 +38033,13 @@ "name": "acroname", "version": "0.1.0", "sha256": "0fff7z3i8h30v7bsyq240h8ws5ld04n6c5r2iizd2icp8dk9xs9x", - "depends": ["dplyr", "hunspell", "magrittr", "purrr", "R_utils", "readr", "stringr"] + "depends": ["R_utils", "dplyr", "hunspell", "magrittr", "purrr", "readr", "stringr"] }, "acs": { "name": "acs", "version": "2.1.4", "sha256": "0ajw9rf8l8akcvgqvbxjvryc6wjx74521xyxswz2b0bky3m6kah5", - "depends": ["httr", "plyr", "stringr", "XML"] + "depends": ["XML", "httr", "plyr", "stringr"] }, "acss": { "name": "acss", @@ -37673,7 +38057,7 @@ "name": "act", "version": "1.3.1", "sha256": "0c5515mxw2ghdwmnqz1www84v3dn7wlvij47wankb4ak285ak30i", - "depends": ["openxlsx", "progress", "stringi", "stringr", "textutils", "XML", "xml2"] + "depends": ["XML", "openxlsx", "progress", "stringi", "stringr", "textutils", "xml2"] }, "actLifer": { "name": "actLifer", @@ -37685,7 +38069,7 @@ "name": "actel", "version": "1.3.0", "sha256": "0hd1mkshywszswnllcx1lvlghnfk92438r57v6r7w8p5i9m04z9x", - "depends": ["circular", "data_table", "DiagrammeR", "DiagrammeRsvg", "fasttime", "ggplot2", "knitr", "readr", "reshape2", "rmarkdown", "rsvg", "scales", "stringi", "stringr", "svglite"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "circular", "data_table", "fasttime", "ggplot2", "knitr", "readr", "reshape2", "rmarkdown", "rsvg", "scales", "stringi", "stringr", "svglite"] }, "actilifecounts": { "name": "actilifecounts", @@ -37697,7 +38081,7 @@ "name": "activAnalyzer", "version": "2.1.1", "sha256": "0jbzbn9y9lwhy4003ym4w680glj9mdq3gwkk64hfsh94c52xihk3", - "depends": ["assertthat", "dbplyr", "dplyr", "flextable", "forcats", "ggplot2", "golem", "hms", "lubridate", "magrittr", "modelr", "patchwork", "PhysicalActivity", "plyr", "reactable", "rmarkdown", "RSQLite", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyFeedback", "shinyjs", "stringr", "tidyr", "zoo"] + "depends": ["PhysicalActivity", "RSQLite", "assertthat", "dbplyr", "dplyr", "flextable", "forcats", "ggplot2", "golem", "hms", "lubridate", "magrittr", "modelr", "patchwork", "plyr", "reactable", "rmarkdown", "shiny", "shinyFeedback", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyjs", "stringr", "tidyr", "zoo"] }, "activPAL": { "name": "activPAL", @@ -37707,15 +38091,15 @@ }, "activatr": { "name": "activatr", - "version": "0.2.0", - "sha256": "0d3r9xp7nrva84az3p211f3g995g8p0lz49f6fjlmzd9pc3jzxg9", + "version": "0.2.1", + "sha256": "1lga186jfymbs9padvv3zb25ccrfqhriszql3bbh0pb5ilqf3qdy", "depends": ["dplyr", "geosphere", "ggmap", "glue", "httr", "lubridate", "rlang", "slider", "tibble", "xml2"] }, "activegp": { "name": "activegp", "version": "1.1.1", "sha256": "1b64k0k6l9dgvyqhd6j9plabaibjayfm5maa4bpwxxgwkp122r3c", - "depends": ["hetGP", "lhs", "MASS", "numDeriv", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppProgress", "hetGP", "lhs", "numDeriv"] }, "activity": { "name": "activity", @@ -37749,15 +38133,15 @@ }, "actxps": { "name": "actxps", - "version": "1.4.0", - "sha256": "0c0n93zl4ag5mkaw37y2zyg75x9ga4fb5pxz71iidlfj1xblaywa", - "depends": ["dplyr", "generics", "ggplot2", "glue", "gt", "lubridate", "paletteer", "purrr", "readr", "recipes", "rlang", "scales", "tibble", "tidyr", "vctrs"] + "version": "1.5.0", + "sha256": "1mabhbv5mg4afcxwv4fn2f7847scmddmyfqzzhypypj4pll61nr3", + "depends": ["clock", "dplyr", "generics", "ggplot2", "glue", "gt", "paletteer", "purrr", "readr", "recipes", "rlang", "scales", "tibble", "tidyr", "vctrs"] }, "acumos": { "name": "acumos", "version": "0.4-4", "sha256": "15i4xbcdk5vxjrgac32zh4439v0vmabnw3jvsmxiipap5frp7rpi", - "depends": ["httr", "jsonlite", "RestRserve", "RProtoBuf", "Rserve", "yaml"] + "depends": ["RProtoBuf", "RestRserve", "Rserve", "httr", "jsonlite", "yaml"] }, "ada": { "name": "ada", @@ -37773,15 +38157,15 @@ }, "adaR": { "name": "adaR", - "version": "0.3.2", - "sha256": "0ficdvfpb6lhhbyifvy9r9z6lvxp4ric2aiarfij7r38a8m83j06", + "version": "0.3.3", + "sha256": "0vd79id211n1w8hqr3jpncdf3x8rg80gkdwfg4618hkadzdf2a2h", "depends": ["Rcpp", "triebeard"] }, "adabag": { "name": "adabag", "version": "5.0", "sha256": "03nnqgia61pavic9l6av0hh81wilxlkrx3g244ypar1fv9ppan7c", - "depends": ["caret", "ConsRank", "doParallel", "dplyr", "foreach", "rpart", "tidyr"] + "depends": ["ConsRank", "caret", "doParallel", "dplyr", "foreach", "rpart", "tidyr"] }, "adace": { "name": "adace", @@ -37799,19 +38183,19 @@ "name": "adamethods", "version": "1.2.1", "sha256": "150awbd3skb1mqca18bqjykhyycqw8crviw66s6qrcnmcsbk77pj", - "depends": ["Anthropometry", "archetypes", "FNN", "foreach", "nnls", "tolerance", "univOutl"] + "depends": ["Anthropometry", "FNN", "archetypes", "foreach", "nnls", "tolerance", "univOutl"] }, "adana": { "name": "adana", "version": "1.1.0", "sha256": "0zi3a17rapc1z074k3yzgjv2b6ba6c9d54b1hm0ivvgfd335981f", - "depends": ["optimx", "ROI", "ROI_plugin_optimx"] + "depends": ["ROI", "ROI_plugin_optimx", "optimx"] }, "adapt4pv": { "name": "adapt4pv", "version": "0.2-3", "sha256": "05z3dwcx7pyysf0ghz8m6ij3lj53qkqll50b0gd2yi7ffp9m9601", - "depends": ["doParallel", "foreach", "glmnet", "Matrix", "speedglm", "xgboost"] + "depends": ["Matrix", "doParallel", "foreach", "glmnet", "speedglm", "xgboost"] }, "adaptDiag": { "name": "adaptDiag", @@ -37829,7 +38213,7 @@ "name": "adaptMCMC", "version": "1.5", "sha256": "1inw339n2rb1g2n9zkmv8gp43lifil3plv82x9sxrq468ihzng4f", - "depends": ["coda", "Matrix", "ramcmc"] + "depends": ["Matrix", "coda", "ramcmc"] }, "adaptMT": { "name": "adaptMT", @@ -37871,31 +38255,37 @@ "name": "adaptsmoFMRI", "version": "1.2", "sha256": "00npcl2js9vj5r3l66cp5d2l807klia581pig1gsyjjq4rvmfa7v", - "depends": ["coda", "Matrix", "MCMCpack", "mvtnorm", "spatstat", "spatstat_geom"] + "depends": ["MCMCpack", "Matrix", "coda", "mvtnorm", "spatstat", "spatstat_geom"] + }, + "adass": { + "name": "adass", + "version": "1.0.1", + "sha256": "1shp1yja5zqikl29j2xi4jlwsbkrlg593isnclhy7bwaqyn3qm14", + "depends": ["Rfast", "SparseM", "fda", "matrixcalc", "mvtnorm", "plot3D"] }, "adbcdrivermanager": { "name": "adbcdrivermanager", - "version": "0.12.0", - "sha256": "0kvn6agx5vscdl77zzkz8lhlr2i7p9qda6q52ligwvjyrh5zyi48", + "version": "0.13.0", + "sha256": "0d0fcjqcmbfbpln3s6n3aas9pz3ich43vnm6qnl8sf6dil3fxnsg", "depends": ["nanoarrow"] }, "adbcpostgresql": { "name": "adbcpostgresql", - "version": "0.12.0", - "sha256": "031qv19rx389br9dv3nxpghy580g1aywv265la03s9g6d5jw9j4r", + "version": "0.13.0", + "sha256": "0lspgnimsgpkyf6q0qk5gjf9kij5w2x6xjcp6cy8hpwbp6xci8yr", "depends": ["adbcdrivermanager"] }, "adbcsqlite": { "name": "adbcsqlite", - "version": "0.12.0", - "sha256": "085djnpafh4gdklai3x54bjbkqkiyjlz9nygddmid3x3x4xg01vj", + "version": "0.13.0", + "sha256": "1vqabya705454lsxis73j2nflqp6jydk1hhcjnc79kjxf332nq5z", "depends": ["adbcdrivermanager"] }, "adbi": { "name": "adbi", "version": "0.1.1", "sha256": "17w74ggng77yvpqn0vw1s1gylmchrv2dq6s19fl56dl6nqp6bfpa", - "depends": ["adbcdrivermanager", "DBI", "nanoarrow"] + "depends": ["DBI", "adbcdrivermanager", "nanoarrow"] }, "adc": { "name": "adc", @@ -37907,7 +38297,7 @@ "name": "add2ggplot", "version": "0.3.0", "sha256": "0c94i1cfp2pvplvxmfvvz2fyj026r1jnax05mrzrc7ppnqzy25y0", - "depends": ["ggplot2", "magick", "magrittr", "RColorBrewer", "zeallot"] + "depends": ["RColorBrewer", "ggplot2", "magick", "magrittr", "zeallot"] }, "addScales": { "name": "addScales", @@ -37919,7 +38309,7 @@ "name": "addhaz", "version": "0.5", "sha256": "1709jq9rp5lhqk0qpk8zkdwzhcv1bcach8mm7yiz7hzcc1mgxb12", - "depends": ["boot", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "boot"] }, "addhazard": { "name": "addhazard", @@ -37937,13 +38327,13 @@ "name": "addinsOutline", "version": "0.1.6", "sha256": "125qfqbpv5xflw8qlyh8m3iyd6biyp3arls3z7y8bqkbghifl730", - "depends": ["dplyr", "DT", "fs", "miniUI", "rmarkdown", "rstudioapi", "shiny", "shinyFiles", "stringr", "tibble", "yaml"] + "depends": ["DT", "dplyr", "fs", "miniUI", "rmarkdown", "rstudioapi", "shiny", "shinyFiles", "stringr", "tibble", "yaml"] }, "addinslist": { "name": "addinslist", "version": "0.5.0", "sha256": "0gis7485m7gz3xz5wfxxm3136cg2j9i6f6zq8gbv206w261y1nfb", - "depends": ["curl", "DT", "miniUI", "rappdirs", "remotes", "rmarkdown", "rvest", "shiny", "shinyjs", "xml2"] + "depends": ["DT", "curl", "miniUI", "rappdirs", "remotes", "rmarkdown", "rvest", "shiny", "shinyjs", "xml2"] }, "additive": { "name": "additive", @@ -37973,7 +38363,7 @@ "name": "ade4", "version": "1.7-22", "sha256": "1d4knc1c1hha4gwcakbllzmff4g0mh56y058dn6wp9m2hd7gaz80", - "depends": ["MASS", "pixmap", "Rcpp", "RcppArmadillo", "sp"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "pixmap", "sp"] }, "ade4TkGUI": { "name": "ade4TkGUI", @@ -37985,19 +38375,19 @@ "name": "adea", "version": "1.5.1", "sha256": "0wjklmd1r5vhp32syn9dpn5j05y9nfb0c8cnrdc2xcdsi8dzdkap", - "depends": ["combinat", "knitr", "lpSolveAPI", "parallelly", "rmarkdown", "ROI", "ROI_plugin_glpk", "ROI_plugin_lpsolve", "ROI_plugin_symphony", "slam"] + "depends": ["ROI", "ROI_plugin_glpk", "ROI_plugin_lpsolve", "ROI_plugin_symphony", "combinat", "knitr", "lpSolveAPI", "parallelly", "rmarkdown", "slam"] }, "adegenet": { "name": "adegenet", "version": "2.1.10", "sha256": "0qxig2jyj1q0a8pwpv5f5v5b4x4af8s9p1p0yc0msmyxq457hqmb", - "depends": ["ade4", "ape", "boot", "dplyr", "ggplot2", "igraph", "MASS", "reshape2", "seqinr", "shiny", "vegan"] + "depends": ["MASS", "ade4", "ape", "boot", "dplyr", "ggplot2", "igraph", "reshape2", "seqinr", "shiny", "vegan"] }, "adegraphics": { "name": "adegraphics", "version": "1.0-21", "sha256": "1a7bz9j06sc09kvynzss71dxffp40vsl35azj0gzs81jl2rr4ap0", - "depends": ["ade4", "KernSmooth", "lattice", "latticeExtra", "RColorBrewer", "sp"] + "depends": ["KernSmooth", "RColorBrewer", "ade4", "lattice", "latticeExtra", "sp"] }, "adehabitatHR": { "name": "adehabitatHR", @@ -38015,7 +38405,7 @@ "name": "adehabitatLT", "version": "0.3.27", "sha256": "0siaj9h9gyar6pmnv9bp4k7lcpfcvhykl3jj80pzdb6yyybgj2zx", - "depends": ["ade4", "adehabitatMA", "CircStats", "sp"] + "depends": ["CircStats", "ade4", "adehabitatMA", "sp"] }, "adehabitatMA": { "name": "adehabitatMA", @@ -38023,6 +38413,12 @@ "sha256": "1jmmi6rh3rnv5b3qy1xhy0rs4dnkysf4rxjfs0im1i5n4rd437h8", "depends": ["sp"] }, + "adelie": { + "name": "adelie", + "version": "1.0.1", + "sha256": "1h6i2swda173mfilib8cg535w4ba1yciliy071brazhh4r9zcm8m", + "depends": ["Matrix", "Rcpp", "RcppEigen", "r2r"] + }, "adephylo": { "name": "adephylo", "version": "1.1-16", @@ -38033,7 +38429,7 @@ "name": "adepro", "version": "4.1.0", "sha256": "06zj8vq7py41g0bjpnd4fczwxcr4k1lb1cxjxfc92fhj0wk51k36", - "depends": ["audio", "Cairo", "dplyr", "forcats", "haven", "here", "MASS", "readr", "rlang", "seriation", "shape", "shiny", "shinyBS", "shinyjs", "shinyWidgets", "tidyr", "V8"] + "depends": ["Cairo", "MASS", "V8", "audio", "dplyr", "forcats", "haven", "here", "readr", "rlang", "seriation", "shape", "shiny", "shinyBS", "shinyWidgets", "shinyjs", "tidyr"] }, "adept": { "name": "adept", @@ -38051,13 +38447,13 @@ "name": "adespatial", "version": "0.3-23", "sha256": "0cszq382vpd8alc98hnrzqj1wyp8bcfbvqpi1d2rqbr12f5qgq3h", - "depends": ["ade4", "adegraphics", "adephylo", "lattice", "MASS", "shiny", "sp", "spdep", "vegan"] + "depends": ["MASS", "ade4", "adegraphics", "adephylo", "lattice", "shiny", "sp", "spdep", "vegan"] }, "adestr": { "name": "adestr", - "version": "0.5.0", - "sha256": "0gwkmj0fg732ci02cgyr95s245vfakjzqacsa7g5k258w8wyxwip", - "depends": ["cubature", "forcats", "future_apply", "ggplot2", "ggpubr", "latex2exp", "pracma", "progressr", "Rdpack", "scales"] + "version": "1.0.0", + "sha256": "1inzp6ar5mg08cq2mmh7f0m87yvmf2cihv2zysn9v00x1g5zcb48", + "depends": ["Rdpack", "adoptr", "cubature", "forcats", "future_apply", "ggplot2", "ggpubr", "latex2exp", "progressr", "scales"] }, "adfExplorer": { "name": "adfExplorer", @@ -38075,12 +38471,12 @@ "name": "adheRenceRX", "version": "1.0.0", "sha256": "19kimj88dmcc8mq3s4l7pph9jz8p57gbjyn0pn5zkrcjdrwncslm", - "depends": ["anytime", "dplyr", "lubridate", "purrr", "Rcpp", "rlang", "tidyr"] + "depends": ["Rcpp", "anytime", "dplyr", "lubridate", "purrr", "rlang", "tidyr"] }, "adimpro": { "name": "adimpro", - "version": "0.9.6", - "sha256": "0d5viz9ayywpp1pas1yzmhllzn9rjrl8a3k7bj7h46f95l5x1586", + "version": "0.9.7", + "sha256": "1p34q78w1ib5xjvxg4c1bal680a55l5dqhiry367x9nzwq8a352c", "depends": ["awsMethods"] }, "adiv": { @@ -38093,7 +38489,7 @@ "name": "adjROC", "version": "0.3", "sha256": "0bf7vvhllpl8irqw1ahfhbhqq67v6jxblapv91ddkgpk2dl0sp03", - "depends": ["boot", "ggplot2", "ROCit", "yardstick"] + "depends": ["ROCit", "boot", "ggplot2", "yardstick"] }, "adjSURVCI": { "name": "adjSURVCI", @@ -38105,13 +38501,13 @@ "name": "adjclust", "version": "0.6.9", "sha256": "1iq0pfw0kdi792iigpj4vq8phbcs9bid09bdvpxwwxcq65djni41", - "depends": ["capushe", "dendextend", "ggplot2", "Matrix", "Rcpp", "RcppArmadillo", "rlang", "sparseMatrixStats"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "capushe", "dendextend", "ggplot2", "rlang", "sparseMatrixStats"] }, "adjustedCurves": { "name": "adjustedCurves", - "version": "0.11.1", - "sha256": "047r9fi9ilcfnb6shkqsnrz4c4gs6x1nbff00wfamncjv19s74yh", - "depends": ["doParallel", "doRNG", "dplyr", "foreach", "R_utils", "rlang", "survival"] + "version": "0.11.2", + "sha256": "11bc2hrxr65i1rk2zv7r7daqm7m5v9xhhgk1fwr0jbs6c4dk2niw", + "depends": ["R_utils", "doParallel", "doRNG", "dplyr", "foreach", "rlang", "survival"] }, "adjustedcranlogs": { "name": "adjustedcranlogs", @@ -38133,8 +38529,8 @@ }, "admiral": { "name": "admiral", - "version": "1.1.0", - "sha256": "1ynqmpswhcy4qlaf8yvhhlax6j9xii5m7bwvrxrjzqnpdcif4hrb", + "version": "1.1.1", + "sha256": "0g669is6kj6hqpi2i6ik6c0c5mrx3750dd8dsnjmv25aiy60hnzp", "depends": ["admiraldev", "cli", "dplyr", "hms", "lifecycle", "lubridate", "magrittr", "purrr", "rlang", "stringr", "tidyr", "tidyselect"] }, "admiral_test": { @@ -38151,14 +38547,14 @@ }, "admiralonco": { "name": "admiralonco", - "version": "1.0.0", - "sha256": "03q02l4abrcgpg17cyfq2vhzinlywm0ir6wqx2ch43d3agzyypzy", + "version": "1.1.0", + "sha256": "022cjygxyq40fg66bdky0pdffyv6dafq77s6g7skxmyqrp6wqhqd", "depends": ["admiral", "admiraldev", "dplyr", "lifecycle", "lubridate", "magrittr", "rlang", "tidyselect"] }, "admiralophtha": { "name": "admiralophtha", - "version": "1.0.0", - "sha256": "0ip69mishnx8yllfp2vm2qsa5917hwi974lr8qwil9xx6d2hgbkz", + "version": "1.1.0", + "sha256": "1690id6s5633r47av68wivg436h5s13a5qlg9a1dyfghd6wfa79f", "depends": ["admiral", "admiraldev", "dplyr", "hms", "lifecycle", "lubridate", "magrittr", "purrr", "rlang", "stringr", "tidyr", "tidyselect"] }, "admiralvaccine": { @@ -38177,7 +38573,7 @@ "name": "admix", "version": "2.1-3", "sha256": "0h6saazz2p8pliznn2ggbi6zj5ib00ylghfxj5i9nk21p4y0s59s", - "depends": ["cubature", "fdrtool", "Iso", "MASS", "orthopolynom", "pracma", "Rcpp"] + "depends": ["Iso", "MASS", "Rcpp", "cubature", "fdrtool", "orthopolynom", "pracma"] }, "admixr": { "name": "admixr", @@ -38193,21 +38589,21 @@ }, "admtools": { "name": "admtools", - "version": "0.2.0", - "sha256": "11xp0zcv0qj0l4nq1c5wc4w6zc569qfhd4ir6knwynq68n89p8c2", + "version": "0.3.0", + "sha256": "01vawhabsj09zf8126wfyawp3likf2i0k7micwjdmll33ykl8254", "depends": ["ape"] }, "adnuts": { "name": "adnuts", "version": "1.1.2", "sha256": "0nkciv5sfj3bws6kpgrnaq4ziasibaz44w64mb86zmr8420nyc1q", - "depends": ["ellipse", "ggplot2", "R2admb", "rlang", "rstan", "snowfall"] + "depends": ["R2admb", "ellipse", "ggplot2", "rlang", "rstan", "snowfall"] }, "adobeanalyticsr": { "name": "adobeanalyticsr", "version": "0.4.0", "sha256": "1cbr86ssnd0bl6pvqziz16nvh3gzmd170pkk8wr2rkhm0rryh2l4", - "depends": ["assertthat", "dplyr", "ggplot2", "glue", "httr", "jose", "jsonlite", "lifecycle", "lubridate", "memoise", "openssl", "progress", "purrr", "R6", "rlang", "scales", "stringr", "tidyr", "vctrs"] + "depends": ["R6", "assertthat", "dplyr", "ggplot2", "glue", "httr", "jose", "jsonlite", "lifecycle", "lubridate", "memoise", "openssl", "progress", "purrr", "rlang", "scales", "stringr", "tidyr", "vctrs"] }, "adoptr": { "name": "adoptr", @@ -38217,9 +38613,9 @@ }, "adproclus": { "name": "adproclus", - "version": "1.0.2", - "sha256": "1aj9bb86fmgq6ln39pmkws0bp07wf02k3fahgsv3hq86yflgac8q", - "depends": ["checkmate", "corrplot", "gtools", "igraph", "NMFN", "qgraph", "withr"] + "version": "2.0.0", + "sha256": "00n7nc11c47vcjz8zlx855dw9lq9d12qghx42hz1xy0ah0iqjh3q", + "depends": ["NMFN", "checkmate", "corrplot", "ggplot2", "ggrepel", "gtools", "igraph", "matrixStats", "multichull", "qgraph", "readr", "rlang", "scales", "tidyr", "withr"] }, "adpss": { "name": "adpss", @@ -38243,7 +38639,7 @@ "name": "adventr", "version": "0.1.8", "sha256": "0nja1a2xhaimz1fg2bb838x9a37sswjqjc68mp59gbdwkfpdii37", - "depends": ["BayesFactor", "boot", "car", "dplyr", "effects", "effsize", "forcats", "GGally", "ggplot2", "Hmisc", "learnr", "lm_beta", "nlme", "readr", "robust", "sandwich", "sjstats", "tidyr", "WRS2"] + "depends": ["BayesFactor", "GGally", "Hmisc", "WRS2", "boot", "car", "dplyr", "effects", "effsize", "forcats", "ggplot2", "learnr", "lm_beta", "nlme", "readr", "robust", "sandwich", "sjstats", "tidyr"] }, "adw": { "name": "adw", @@ -38275,6 +38671,12 @@ "sha256": "1sy3j78lawa10rf22fa3wsbal2mv64hs1k5v7yqf9hx11jib26sz", "depends": ["dplyr", "ggplot2", "lifecycle", "magrittr", "purrr", "rlang", "tibble"] }, + "aelab": { + "name": "aelab", + "version": "0.4.0", + "sha256": "0v4mm9nq5l7hm3mh421xw5rnc0ibhc9jy5pqfqhcw3brygffdhbf", + "depends": ["dplyr", "ggplot2", "lubridate", "openxlsx", "readr", "readxl", "tibble", "tidyr"] + }, "afc": { "name": "afc", "version": "1.4.0", @@ -38309,19 +38711,13 @@ "name": "affinitymatrix", "version": "0.1.0", "sha256": "10i7wzl4xiphj5f466ga7c4ha3mkyqn63x1z0jyx50m0b84sggq1", - "depends": ["expm", "ggplot2", "ggrepel", "Hmisc", "MASS"] - }, - "affluenceIndex": { - "name": "affluenceIndex", - "version": "2.1", - "sha256": "0vcg4gphs0yxdxsgw7kj9r3hvjpfs2z8sjvllvfw9ki3y7jy5jb8", - "depends": ["spatstat", "spatstat_geom"] + "depends": ["Hmisc", "MASS", "expm", "ggplot2", "ggrepel"] }, "afmToolkit": { "name": "afmToolkit", "version": "0.0.1", "sha256": "1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl", - "depends": ["assertthat", "DBI", "dplyr", "ggplot2", "gridExtra", "minpack_lm", "scales", "tibble"] + "depends": ["DBI", "assertthat", "dplyr", "ggplot2", "gridExtra", "minpack_lm", "scales", "tibble"] }, "afpt": { "name": "afpt", @@ -38333,7 +38729,7 @@ "name": "africamonitor", "version": "0.2.4", "sha256": "0nqxvyv6hipadyfzc6mvr2pns3m7n7h3i87lzvgx8fj2rlcigqkq", - "depends": ["collapse", "data_table", "DBI", "RMySQL"] + "depends": ["DBI", "RMySQL", "collapse", "data_table"] }, "aftR2": { "name": "aftR2", @@ -38345,19 +38741,19 @@ "name": "aftgee", "version": "1.2.0", "sha256": "01mjgahs6wfd47imnw0zni57ilcy76gh5lpsihxyd3grwd9jkki7", - "depends": ["BB", "geepack", "MASS", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["BB", "MASS", "Rcpp", "RcppArmadillo", "geepack", "survival"] }, "afthd": { "name": "afthd", "version": "1.1.0", "sha256": "0gg2cp3sj28f3pi5rqh737hna3imwarwas01jacm0m2h27587k7y", - "depends": ["glmnet", "photobiology", "R2jags", "rstpm2", "survival"] + "depends": ["R2jags", "glmnet", "photobiology", "rstpm2", "survival"] }, "afttest": { "name": "afttest", "version": "4.3.2.3", "sha256": "1jk8xs4mcayaij5rjl891mzg3dq9qs0lyi5gfzi6sjar6apmwsfb", - "depends": ["aftgee", "ggplot2", "gridExtra", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "aftgee", "ggplot2", "gridExtra", "survival"] }, "ag5Tools": { "name": "ag5Tools", @@ -38369,13 +38765,13 @@ "name": "agRee", "version": "0.5-3", "sha256": "1wi8jn14kpsj5z49my6fz8j6zxysddxm8svw86cnzsmnbj6mzq7x", - "depends": ["coda", "lme4", "miscF", "R2jags"] + "depends": ["R2jags", "coda", "lme4", "miscF"] }, "agcounts": { "name": "agcounts", "version": "0.6.6", "sha256": "1q993a7m639zn5cl8lv300qbqgh8wycqckaynvv9lc6a6j60ygjv", - "depends": ["bslib", "data_table", "DBI", "dplyr", "GGIR", "ggplot2", "gsignal", "lubridate", "magrittr", "Rcpp", "RcppArmadillo", "reactable", "read_gt3x", "reticulate", "RSQLite", "shiny", "stringr", "zoo"] + "depends": ["DBI", "GGIR", "RSQLite", "Rcpp", "RcppArmadillo", "bslib", "data_table", "dplyr", "ggplot2", "gsignal", "lubridate", "magrittr", "reactable", "read_gt3x", "reticulate", "shiny", "stringr", "zoo"] }, "ageg": { "name": "ageg", @@ -38387,12 +38783,12 @@ "name": "agena.ai", "version": "1.1.1", "sha256": "1nn2634r93gg3nwqnlg8c44zajl5jadx0cszah8nq502qby5y36j", - "depends": ["httr", "openxlsx", "Rgraphviz", "rjson"] + "depends": ["Rgraphviz", "httr", "openxlsx", "rjson"] }, "ageutils": { "name": "ageutils", - "version": "0.0.3", - "sha256": "1rrn0ag70bix45kkzpvkyz5hqnh86p0pw902is19gxf3qb8nj2bd", + "version": "0.0.4", + "sha256": "1l25f0qq5lqc5jpcwvvnl6qysrgyz1g8wgqqw10d8z38jks2mrg3", "depends": [] }, "agfh": { @@ -38411,7 +38807,7 @@ "name": "agghoo", "version": "0.1-0", "sha256": "0vaqmydww494ql6xbhhjkpap3lqkhf8hkbcrr1pk81qpszs0pndm", - "depends": ["class", "FNN", "R6", "rpart"] + "depends": ["FNN", "R6", "class", "rpart"] }, "aggregation": { "name": "aggregation", @@ -38453,13 +38849,13 @@ "name": "agricolae", "version": "1.3-7", "sha256": "0zaanfhvlx7c0s9y550hqn9bsffbykchcd7940fxx69jw87fkbf5", - "depends": ["AlgDesign", "cluster", "MASS", "nlme"] + "depends": ["AlgDesign", "MASS", "cluster", "nlme"] }, "agricolaeplotr": { "name": "agricolaeplotr", "version": "0.5.0", "sha256": "0fy9h4r55dn7yxnjlxhy74sf9lcg22mllcg6nwaivp92w03vkccy", - "depends": ["agricolae", "dplyr", "FielDHub", "ggplot2", "ggspatial", "raster", "sf", "sp", "stplanr", "tibble", "tidyr"] + "depends": ["FielDHub", "agricolae", "dplyr", "ggplot2", "ggspatial", "raster", "sf", "sp", "stplanr", "tibble", "tidyr"] }, "agridat": { "name": "agridat", @@ -38477,7 +38873,7 @@ "name": "agriutilities", "version": "1.2.0", "sha256": "17707cdhrzpxcr0xm6kavy3p762yzrjxg4anwgfrhdmrhvygpirf", - "depends": ["data_table", "dplyr", "emmeans", "ggplot2", "ggpubr", "ggrepel", "lme4", "lmerTest", "magrittr", "Matrix", "psych", "rlang", "SpATS", "statgenSTA", "tibble", "tidyr"] + "depends": ["Matrix", "SpATS", "data_table", "dplyr", "emmeans", "ggplot2", "ggpubr", "ggrepel", "lme4", "lmerTest", "magrittr", "psych", "rlang", "statgenSTA", "tibble", "tidyr"] }, "agriwater": { "name": "agriwater", @@ -38525,7 +38921,7 @@ "name": "ahMLE", "version": "1.20.1", "sha256": "1phfzl0kynrq1if12h736jdxrfqc3i4kd32hp7sy2k2z7hkj1dkm", - "depends": ["invGauss", "Matrix", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "invGauss", "survival"] }, "ahaz": { "name": "ahaz", @@ -38543,7 +38939,7 @@ "name": "ahpsurvey", "version": "0.4.1", "sha256": "1r7x4c318nzbx0ppm9272kfpz2bln1cafkv9irnj85nsdcravr33", - "depends": ["dplyr", "knitr", "magrittr", "randomNames", "Rdpack", "tidyr"] + "depends": ["Rdpack", "dplyr", "knitr", "magrittr", "randomNames", "tidyr"] }, "ahptopsis2n": { "name": "ahptopsis2n", @@ -38585,13 +38981,13 @@ "name": "aifeducation", "version": "0.3.3", "sha256": "0lnxbvmsalis942nxgf0c3j602wcdzpvdm9r194c2ci0xpybc6ls", - "depends": ["abind", "doParallel", "foreach", "iotarelr", "irr", "irrCAC", "Rcpp", "RcppArmadillo", "reshape2", "reticulate", "rlang", "smotefamily", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "doParallel", "foreach", "iotarelr", "irr", "irrCAC", "reshape2", "reticulate", "rlang", "smotefamily", "stringr"] }, "aihuman": { "name": "aihuman", "version": "0.1.0", "sha256": "0isd6j3qfhl9dfcknzsfyipvvni7bw6cpdkk4v5azpi3mcixbq4n", - "depends": ["abind", "coda", "doParallel", "dplyr", "foreach", "ggplot2", "lme4", "magrittr", "MASS", "metR", "purrr", "Rcpp", "RcppArmadillo", "RcppEigen", "tidyr"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "abind", "coda", "doParallel", "dplyr", "foreach", "ggplot2", "lme4", "magrittr", "metR", "purrr", "tidyr"] }, "aimPlot": { "name": "aimPlot", @@ -38607,8 +39003,8 @@ }, "aion": { "name": "aion", - "version": "1.0.2", - "sha256": "01h7w39gz03wydxsk2ikikbhi9nw46qq2wl3nksvi91zydyls5zf", + "version": "1.0.4", + "sha256": "0acm2nffrpqbli358cbpl0sd7bq9m5qbnnrk01xd7h9l63xzs67c", "depends": ["arkhe"] }, "air": { @@ -38639,18 +39035,18 @@ "name": "airGRiwrm", "version": "0.6.2", "sha256": "09hcs5qhs3mykdarznqwiqd2vjdc5fqmp8lvfpmf4s2b3yqvydax", - "depends": ["airGR", "DiagrammeR", "dplyr"] + "depends": ["DiagrammeR", "airGR", "dplyr"] }, "airGRteaching": { "name": "airGRteaching", - "version": "0.3.2", - "sha256": "1lhzvhhrylp1c2znrz9b1vni9mqc6kkl7bjc6p3kjwph1vw9ka72", + "version": "0.3.3", + "sha256": "0dsxj20g63a4y4a865qsqdk8w1w0ybcam6x4f10bmppallkalagz", "depends": ["airGR", "dygraphs", "markdown", "plotrix", "shiny", "shinyjs", "xts"] }, "aire_zmvm": { "name": "aire.zmvm", - "version": "0.9.0", - "sha256": "1jb86dkqj8vbbg7iq4852bjdlc4i9mn0x6rc7lhl81nf6rfi9wql", + "version": "1.0.0", + "sha256": "10x22n9cjr2zcjm84j6l3i9lywfw744giww4h2ki3iq3v4qli09y", "depends": ["dplyr", "httr", "lubridate", "progress", "readr", "readxl", "rvest", "sp", "stringr", "tidyr", "xml2"] }, "airnow": { @@ -38687,7 +39083,7 @@ "name": "airt", "version": "0.2.2", "sha256": "1x2p172k7lffcn3cfs7pgdi3iq2fpys8rsrx1spq7gy14xcq9w63", - "depends": ["dplyr", "EstCRM", "ggplot2", "magrittr", "mirt", "pracma", "RColorBrewer", "rlang", "tibble", "tidyr"] + "depends": ["EstCRM", "RColorBrewer", "dplyr", "ggplot2", "magrittr", "mirt", "pracma", "rlang", "tibble", "tidyr"] }, "aisoph": { "name": "aisoph", @@ -38701,6 +39097,12 @@ "sha256": "1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm", "depends": ["RJSONIO", "V8", "yaml"] }, + "aka": { + "name": "aka", + "version": "0.1.0", + "sha256": "0370rs9kz43azgclc11x8185sr5hq507mvk2pmwprwwj86j65vpk", + "depends": [] + }, "akc": { "name": "akc", "version": "0.9.9", @@ -38735,7 +39137,7 @@ "name": "alakazam", "version": "1.3.0", "sha256": "01alngdynigvycmpqa71ccndw6v91hmrs3c2ah0r148rxdgbw58v", - "depends": ["airr", "ape", "Biostrings", "dplyr", "GenomicAlignments", "ggplot2", "igraph", "IRanges", "Matrix", "progress", "Rcpp", "readr", "rlang", "scales", "seqinr", "stringi", "tibble", "tidyr"] + "depends": ["Biostrings", "GenomicAlignments", "IRanges", "Matrix", "Rcpp", "airr", "ape", "dplyr", "ggplot2", "igraph", "progress", "readr", "rlang", "scales", "seqinr", "stringi", "tibble", "tidyr"] }, "alarmdata": { "name": "alarmdata", @@ -38747,7 +39149,7 @@ "name": "albatross", "version": "0.3-8", "sha256": "1cayp4025h14p66alagpvnwm5f05l7gv132x3a2d40cf77nrrpky", - "depends": ["CMLS", "lattice", "Matrix", "multiway", "pracma"] + "depends": ["CMLS", "Matrix", "lattice", "multiway", "pracma"] }, "albopictus": { "name": "albopictus", @@ -38755,6 +39157,12 @@ "sha256": "0kw1agm9jqi9wl5zbx8bryngy751g3sih36rgbrx0m2170cy42d9", "depends": [] }, + "alcyon": { + "name": "alcyon", + "version": "0.4.0", + "sha256": "1l3z7bsspxbhfxldq4pbh7lmwfmmfqry99xhk125ja19h1xfyxl4", + "depends": ["Rcpp", "igraph", "sf", "stars"] + }, "ald": { "name": "ald", "version": "1.3.1", @@ -38765,7 +39173,7 @@ "name": "aldvmm", "version": "0.8.8", "sha256": "1qqfhfrhqlzlmfdf84sq9v17d6jrnn4w7yilskbrg74zvbcbc3k8", - "depends": ["checkmate", "Formula", "lmtest", "numDeriv", "optimx", "sandwich"] + "depends": ["Formula", "checkmate", "lmtest", "numDeriv", "optimx", "sandwich"] }, "ale": { "name": "ale", @@ -38789,7 +39197,7 @@ "name": "algaeClassify", "version": "2.0.2", "sha256": "08jg210aas3bxjqgsapba8fzc133nh9afl0lzy784ywdx96lfmm0", - "depends": ["curl", "jsonlite", "lubridate", "RCurl", "ritis", "taxize"] + "depends": ["RCurl", "curl", "jsonlite", "lubridate", "ritis", "taxize"] }, "algo": { "name": "algo", @@ -38807,13 +39215,13 @@ "name": "aliases2entrez", "version": "0.1.2", "sha256": "11myzwvmagnj35qrrxr35hklzv76c0c4h2zl64y3lzzn5rfii0n6", - "depends": ["AnnotationDbi", "doParallel", "foreach", "limma", "org_Hs_eg_db", "RCurl", "readr"] + "depends": ["AnnotationDbi", "RCurl", "doParallel", "foreach", "limma", "org_Hs_eg_db", "readr"] }, "alien": { "name": "alien", - "version": "1.0.1", - "sha256": "0856csdvz5wz699n7g8bj1azzyw2mfznhcwmabzp740bijy6x6qi", - "depends": ["cli", "dplyr", "ggplot2", "HelpersMG", "rlang", "tidyr"] + "version": "1.0.2", + "sha256": "191prlklg153a7inbbjq3fjz0yr6pyyqcxl4syy8p6a64a92clyn", + "depends": ["HelpersMG", "cli", "dplyr", "ggplot2", "rlang", "tidyr"] }, "align": { "name": "align", @@ -38823,8 +39231,8 @@ }, "alkahest": { "name": "alkahest", - "version": "1.1.1", - "sha256": "1wbdhvak4984rdglsx2h7wwazxkvz2wv93lnizw7b4dm8aqrnapg", + "version": "1.2.0", + "sha256": "18gfj0g1ccisvls4czh24bp3bcakyjfhddkl92fsmy9wpq2i3qhx", "depends": [] }, "allMT": { @@ -38861,7 +39269,7 @@ "name": "allofus", "version": "1.1.0", "sha256": "0lxds215ar26z28jv5kxp61vhg0yy73q7xj0dbdkiqnqhq7z8dhd", - "depends": ["bigrquery", "bit64", "cli", "DBI", "dbplyr", "dplyr", "glue", "lifecycle", "magrittr", "purrr", "rlang", "sessioninfo", "stringr", "tidyr"] + "depends": ["DBI", "bigrquery", "bit64", "cli", "dbplyr", "dplyr", "glue", "lifecycle", "magrittr", "purrr", "rlang", "sessioninfo", "stringr", "tidyr"] }, "allomr": { "name": "allomr", @@ -38879,7 +39287,7 @@ "name": "almanac", "version": "1.0.0", "sha256": "03954ylzqj34kkkz74ffa3i1kbby2vy0gxmbqd4gcw6qa646fq79", - "depends": ["cli", "glue", "lifecycle", "lubridate", "magrittr", "R6", "rlang", "V8", "vctrs"] + "depends": ["R6", "V8", "cli", "glue", "lifecycle", "lubridate", "magrittr", "rlang", "vctrs"] }, "alone": { "name": "alone", @@ -38891,7 +39299,7 @@ "name": "alookr", "version": "0.3.9", "sha256": "13lvbfgqb6ivrik1jcbfz3zn6p41aqwq68bk9ric3xnyjnczc5wg", - "depends": ["caTools", "cli", "dlookr", "dplyr", "future", "ggmosaic", "ggplot2", "glmnet", "MASS", "MLmetrics", "parallelly", "party", "purrr", "randomForest", "ranger", "rlang", "ROCR", "rpart", "tibble", "tidyr", "tidyselect", "xgboost"] + "depends": ["MASS", "MLmetrics", "ROCR", "caTools", "cli", "dlookr", "dplyr", "future", "ggmosaic", "ggplot2", "glmnet", "parallelly", "party", "purrr", "randomForest", "ranger", "rlang", "rpart", "tibble", "tidyr", "tidyselect", "xgboost"] }, "aloom": { "name": "aloom", @@ -38903,7 +39311,7 @@ "name": "alpaca", "version": "0.3.4", "sha256": "1fqw8fcahpgdkj25pd6pq4isd0yrdpiypl3q9ir79a56pvjcn8a4", - "depends": ["data_table", "Formula", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["Formula", "MASS", "Rcpp", "RcppArmadillo", "data_table"] }, "alpha_correction_bh": { "name": "alpha.correction.bh", @@ -38921,13 +39329,13 @@ "name": "alphaOutlier", "version": "1.2.0", "sha256": "09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd", - "depends": ["nleqslv", "quantreg", "Rsolnp"] + "depends": ["Rsolnp", "nleqslv", "quantreg"] }, "alphabetr": { "name": "alphabetr", "version": "0.2.2", "sha256": "1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r", - "depends": ["clue", "dplyr", "multicool", "Rcpp"] + "depends": ["Rcpp", "clue", "dplyr", "multicool"] }, "alphaci": { "name": "alphaci", @@ -38939,13 +39347,13 @@ "name": "alphahull", "version": "2.5", "sha256": "04l078vr3cbf1pjm05p9ny566xwsg3zj059gnssn4nwlkc24n442", - "depends": ["ggplot2", "interp", "R_utils", "sgeostat", "spatstat_geom", "spatstat_random", "splancs"] + "depends": ["R_utils", "ggplot2", "interp", "sgeostat", "spatstat_geom", "spatstat_random", "splancs"] }, "alphashape3d": { "name": "alphashape3d", "version": "1.3.2", "sha256": "15903pl63p5l3kmqskq1y4hb75wwq0sz6k88zysx65xyd83wcmh3", - "depends": ["geometry", "RANN", "rgl"] + "depends": ["RANN", "geometry", "rgl"] }, "alphastable": { "name": "alphastable", @@ -38991,9 +39399,9 @@ }, "altdoc": { "name": "altdoc", - "version": "0.3.0", - "sha256": "1d5p61ffnldprlk87mvhx81byv7p5502pahlval2g3y8g3byya4w", - "depends": ["cli", "desc", "fs", "quarto"] + "version": "0.4.0", + "sha256": "0qp2k7mmpklh484ci2p9g4n7iyjy8ibzmh9w4a2h4sabvlm6v3f0", + "depends": ["cli", "desc", "evaluate", "fs", "quarto"] }, "altfuelr": { "name": "altfuelr", @@ -39005,7 +39413,13 @@ "name": "altmeta", "version": "4.1", "sha256": "01v308389wqzp35icrp9ssb4y4gxwjzl600qw47c6rmm6s2mxzjh", - "depends": ["coda", "lme4", "Matrix", "metafor", "rjags"] + "depends": ["Matrix", "coda", "lme4", "metafor", "rjags"] + }, + "amVennDiagram5": { + "name": "amVennDiagram5", + "version": "1.0.0", + "sha256": "0f4w66pqb95bk5h0xi35lxq4535rjpbgkl6j9r3wx7rl8g6lpl7q", + "depends": ["htmlwidgets", "partitions", "venn"] }, "amanida": { "name": "amanida", @@ -39057,8 +39471,8 @@ }, "amberr": { "name": "amberr", - "version": "1.0.0", - "sha256": "1m9mjxah9kk5d7rw7xanqwyjlwp924f6vw7glbj26n2f8k27ja7g", + "version": "1.1.0", + "sha256": "0fqn79lw4zf2yip6qbn3wkcdz44zrf9awq3kjw8smhbv84dcddll", "depends": ["dplyr", "httr", "jsonlite"] }, "ambient": { @@ -39071,7 +39485,7 @@ "name": "ambit", "version": "0.1.2", "sha256": "1zjsbza5gzr0sfprfxrxrxy3f75r64bi5szk519n2wf5vr4qr7si", - "depends": ["fBasics", "Rcpp"] + "depends": ["Rcpp", "fBasics"] }, "amelie": { "name": "amelie", @@ -39089,7 +39503,7 @@ "name": "amerifluxr", "version": "1.0.0", "sha256": "099vv1axgp4jfi9ic4rqsdcv8a5dz1z0zdmdx8r8h474p3jdqm7c", - "depends": ["heatmaply", "httr", "jsonlite", "memoise", "RCurl", "readxl"] + "depends": ["RCurl", "heatmaply", "httr", "jsonlite", "memoise", "readxl"] }, "amerika": { "name": "amerika", @@ -39107,19 +39521,19 @@ "name": "ammiBayes", "version": "1.0-2", "sha256": "0mj14n882jcg7p7rldb0d7yndp1dv3vma9g7f7f0vabhwm6d1jkd", - "depends": ["bayesplot", "coda", "distfree_cr", "Hmisc", "lattice", "latticeExtra", "movMF", "msm", "spam"] + "depends": ["Hmisc", "bayesplot", "coda", "distfree_cr", "lattice", "latticeExtra", "movMF", "msm", "spam"] }, "ammistability": { "name": "ammistability", "version": "0.1.4", "sha256": "06hlbpwa0d1grs7k1vfhchrfi9zml76hkn41vnrayv35fx0sl1pz", - "depends": ["agricolae", "ggcorrplot", "ggplot2", "mathjaxr", "Rdpack", "reshape2"] + "depends": ["Rdpack", "agricolae", "ggcorrplot", "ggplot2", "mathjaxr", "reshape2"] }, "amp": { "name": "amp", "version": "1.0.0", "sha256": "11132s3bdjcldvpws7yc1w4nifvq0iaavdda2zj0wwmi4rw5xx5c", - "depends": ["dplyr", "ggplot2", "glmnet", "MASS", "rlang", "SuperLearner", "tidyr"] + "depends": ["MASS", "SuperLearner", "dplyr", "ggplot2", "glmnet", "rlang", "tidyr"] }, "ampd": { "name": "ampd", @@ -39131,7 +39545,7 @@ "name": "ampir", "version": "1.1.0", "sha256": "0nnsxrnq3m1frrjp3i8bhm67x6xnl0scyb67wxgm5x7b187svhfj", - "depends": ["caret", "kernlab", "Peptides", "Rcpp"] + "depends": ["Peptides", "Rcpp", "caret", "kernlab"] }, "amregtest": { "name": "amregtest", @@ -39139,17 +39553,23 @@ "sha256": "0c5x95iiqr0fa2ph6zily6qp542yc08vwzgrvfhclmkrn9zjcjap", "depends": ["allelematch", "digest", "remotes", "testthat", "withr"] }, + "amscorer": { + "name": "amscorer", + "version": "0.1.0", + "sha256": "15c9crj52m93122yp2fvx75vgm73lq3f3hc9jkg2f122mz6ml65x", + "depends": [] + }, "amt": { "name": "amt", "version": "0.2.2.0", "sha256": "1yx5rvc18ppk37z1m72a1j80ai4b84zc8fh5py2zipvc7phwqfsw", - "depends": ["checkmate", "circular", "ctmm", "data_table", "dplyr", "fitdistrplus", "FNN", "KernSmooth", "lubridate", "MASS", "purrr", "Rdpack", "rlang", "sf", "sfheaders", "survival", "terra", "tibble", "tidyr"] + "depends": ["FNN", "KernSmooth", "MASS", "Rdpack", "checkmate", "circular", "ctmm", "data_table", "dplyr", "fitdistrplus", "lubridate", "purrr", "rlang", "sf", "sfheaders", "survival", "terra", "tibble", "tidyr"] }, "anMC": { "name": "anMC", "version": "0.2.5", "sha256": "0xrby8qyfd3dgi64kllspvalz9yrxjdj5qd1fqjdl6qwb3h6rkga", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm"] }, "anabel": { "name": "anabel", @@ -39173,7 +39593,7 @@ "name": "analogue", "version": "0.17-6", "sha256": "0c5h8nnbflydv35ja1pfhyx7ifwlriwgcnrmxj5il5lvcr70y1vi", - "depends": ["brglm", "lattice", "MASS", "mgcv", "princurve", "vegan"] + "depends": ["MASS", "brglm", "lattice", "mgcv", "princurve", "vegan"] }, "analyzer": { "name": "analyzer", @@ -39205,6 +39625,12 @@ "sha256": "1p2g51w80jiadlf4asbnsw46asarzlzr5c1yfhdb31ymqxd7p76q", "depends": ["Hmisc", "weights"] }, + "angstromATE": { + "name": "angstromATE", + "version": "0.1.2", + "sha256": "0chmzliwd9ygcjvvd20vfp1immmrnhxwdc83la11l8v0ind10syl", + "depends": ["XML"] + }, "angstroms": { "name": "angstroms", "version": "0.0.1", @@ -39221,7 +39647,7 @@ "name": "aniSNA", "version": "1.1.1", "sha256": "1rvrpcw1j5xwz8ns7njvf8blal8nh6c45avy5rpzb5kifiv8yxgy", - "depends": ["dplyr", "ggplot2", "igraph", "lubridate", "magrittr", "plotrix", "Rcpp", "reshape", "rlang", "stringr"] + "depends": ["Rcpp", "dplyr", "ggplot2", "igraph", "lubridate", "magrittr", "plotrix", "reshape", "rlang", "stringr"] }, "anim_plots": { "name": "anim.plots", @@ -39233,13 +39659,13 @@ "name": "animalEKF", "version": "1.2", "sha256": "1qhmgwmg9nw8hcsd8gkvk0h8rmk82zkqjyd94a1d79cwmryxls9b", - "depends": ["bezier", "colorspace", "deldir", "ellipse", "ggplot2", "HDInterval", "MASS", "Matrix", "MCMCpack", "mvtnorm", "plyr", "png", "rlang", "sf", "shiny", "sp"] + "depends": ["HDInterval", "MASS", "MCMCpack", "Matrix", "bezier", "colorspace", "deldir", "ellipse", "ggplot2", "mvtnorm", "plyr", "png", "rlang", "sf", "shiny", "sp"] }, "animate": { "name": "animate", "version": "0.3.9.4", "sha256": "1pzgxz3xdp7c1swd5sxzlpyvvqv3shw8dxnbjwv1cr5g406p8970", - "depends": ["base64enc", "glue", "httpuv", "jsonlite", "R_utils", "R6"] + "depends": ["R6", "R_utils", "base64enc", "glue", "httpuv", "jsonlite"] }, "animation": { "name": "animation", @@ -39251,13 +39677,13 @@ "name": "animbook", "version": "1.0.0", "sha256": "0wbzpcqmr1ysk2xcwmjl1dldz7bpaqsdyq36512lipq60hzq1v81", - "depends": ["dplyr", "gganimate", "ggplot2", "plotly", "purrr", "RColorBrewer", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["RColorBrewer", "dplyr", "gganimate", "ggplot2", "plotly", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "animint2": { "name": "animint2", "version": "2024.1.24", "sha256": "03zff0c7iz819js5iknx33kbfnqisfqbdji16bzd047y0s767rck", - "depends": ["data_table", "digest", "gtable", "knitr", "MASS", "plyr", "reshape2", "RJSONIO", "scales", "servr"] + "depends": ["MASS", "RJSONIO", "data_table", "digest", "gtable", "knitr", "plyr", "reshape2", "scales", "servr"] }, "animl": { "name": "animl", @@ -39269,7 +39695,7 @@ "name": "anipaths", "version": "0.10.3", "sha256": "03vhxva67b0nr75dr8ddz661jr1ha3kryibqy2nhqk851jx5vywx", - "depends": ["animation", "crawl", "dplyr", "ellipse", "ggmap", "ggplot2", "igraph", "lubridate", "magrittr", "mgcv", "mvtnorm", "RColorBrewer", "sf", "stringr", "tidyr", "tidyselect"] + "depends": ["RColorBrewer", "animation", "crawl", "dplyr", "ellipse", "ggmap", "ggplot2", "igraph", "lubridate", "magrittr", "mgcv", "mvtnorm", "sf", "stringr", "tidyr", "tidyselect"] }, "aniview": { "name": "aniview", @@ -39281,7 +39707,7 @@ "name": "anndata", "version": "0.7.5.6", "sha256": "1q1ii43wfj68qdlzhqj9msxqsfzpidhhlfrisax4p943v7yh75mi", - "depends": ["assertthat", "Matrix", "R6", "reticulate"] + "depends": ["Matrix", "R6", "assertthat", "reticulate"] }, "annmatrix": { "name": "annmatrix", @@ -39317,7 +39743,7 @@ "name": "anomaly", "version": "4.3.2", "sha256": "1w0bc5147rqsakiz3cs37xcd27i2b5ni1dva2kxv8l17ma0519v3", - "depends": ["BH", "cowplot", "dplyr", "ggplot2", "Rcpp", "Rdpack", "tidyr", "xts", "zoo"] + "depends": ["BH", "Rcpp", "Rdpack", "cowplot", "dplyr", "ggplot2", "tidyr", "xts", "zoo"] }, "anovir": { "name": "anovir", @@ -39331,30 +39757,6 @@ "sha256": "1hakvxgc50zshi5kplg90r0499mihhwvhhz7bshndjxxci1ashkl", "depends": [] }, - "antaresEditObject": { - "name": "antaresEditObject", - "version": "0.7.0", - "sha256": "1v9lhaw2cs4ggfpwi1zdlganks3xrnlsycziv0h3zi5zg45mar7v", - "depends": ["antaresRead", "assertthat", "cli", "data_table", "doFuture", "doParallel", "future", "httr", "jsonlite", "lifecycle", "memuse", "pbapply", "plyr", "progressr", "whisker", "yaml"] - }, - "antaresProcessing": { - "name": "antaresProcessing", - "version": "0.18.1", - "sha256": "1dlq850xqh9534ws88ma3vv5r79cbabn6r6a2jmicxx116s7wjrz", - "depends": ["antaresRead", "data_table"] - }, - "antaresRead": { - "name": "antaresRead", - "version": "2.7.0", - "sha256": "0rgb2glphf6f4vw1hrjxm1f2lhdsx1zag6r0bqgvmzkqipvp97zk", - "depends": ["bit64", "data_table", "doParallel", "httr", "jsonlite", "lifecycle", "lubridate", "memuse", "pbapply", "plyr", "purrr", "shiny", "stringi", "stringr"] - }, - "antaresViz": { - "name": "antaresViz", - "version": "0.18.0", - "sha256": "1lffsxv8fy3yq6rx6520rizp9f74d8bd78by5n209yr9yhw1629r", - "depends": ["antaresProcessing", "antaresRead", "assertthat", "data_table", "dygraphs", "geojsonio", "htmltools", "htmlwidgets", "leaflet", "leaflet_minicharts", "lubridate", "manipulateWidget", "plotly", "rAmCharts", "sf", "shiny", "sp", "spMaps", "webshot"] - }, "anthro": { "name": "anthro", "version": "1.0.1", @@ -39395,7 +39797,7 @@ "name": "anybadger", "version": "0.1.0", "sha256": "1aa09v5k5nlvhlir8saa5gnrq7cb1djbdc8y85cjgb3skay94hzv", - "depends": ["config", "glue", "magrittr", "purrr", "R6"] + "depends": ["R6", "config", "glue", "magrittr", "purrr"] }, "anyflights": { "name": "anyflights", @@ -39411,9 +39813,9 @@ }, "ao": { "name": "ao", - "version": "0.3.3", - "sha256": "0jh5kw7z13bx6mbsnsc5ac1mscazril7m357lc25nlb2s0nvxisd", - "depends": ["checkmate", "cli", "oeli", "optimizeR"] + "version": "1.1.0", + "sha256": "0d7c7g4s0m46qhjrbpd4cfq61z5y3s9f5k69ramn16sc4l0ybsqw", + "depends": ["R6", "checkmate", "cli", "future_apply", "oeli", "optimizeR", "progressr"] }, "aod": { "name": "aod", @@ -39449,7 +39851,7 @@ "name": "aorsf", "version": "0.1.5", "sha256": "1a69kiji309c2anp0nqdb7n77zlbsl0aibiiazjw6zflwf8fff4l", - "depends": ["collapse", "data_table", "lifecycle", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "collapse", "data_table", "lifecycle"] }, "aos": { "name": "aos", @@ -39461,13 +39863,13 @@ "name": "apa", "version": "0.3.4", "sha256": "0w4cqb9fviz6k4b9cj31sgizqmrkxjr9hjdb8ap32ylzr9dw6gy0", - "depends": ["dplyr", "magrittr", "MBESS", "purrr", "rmarkdown", "stringr", "tibble"] + "depends": ["MBESS", "dplyr", "magrittr", "purrr", "rmarkdown", "stringr", "tibble"] }, "apaTables": { "name": "apaTables", "version": "2.0.8", "sha256": "0jy6x0z9ivqqkjihqhyg3fxyghqa9gs6q2bpxzjdnbcb3kq151vd", - "depends": ["boot", "broom", "car", "dplyr", "MBESS", "tibble"] + "depends": ["MBESS", "boot", "broom", "car", "dplyr", "tibble"] }, "apaText": { "name": "apaText", @@ -39485,7 +39887,7 @@ "name": "apc", "version": "2.0.0", "sha256": "0vh6iyxm46k8sfa1xgz0y6m619snnm8s072kml5qgiiw5s7bqnpq", - "depends": ["AER", "car", "ChainLadder", "ggplot2", "ISLR", "lattice", "lmtest", "plm", "plyr", "reshape", "survey"] + "depends": ["AER", "ChainLadder", "ISLR", "car", "ggplot2", "lattice", "lmtest", "plm", "plyr", "reshape", "survey"] }, "apcf": { "name": "apcf", @@ -39509,7 +39911,7 @@ "name": "ape", "version": "5.8", "sha256": "092dx0x763r6ch6pp4c4fkmnq5alrq0527p72w1wdg71g6cp5ki4", - "depends": ["digest", "lattice", "nlme", "Rcpp"] + "depends": ["Rcpp", "digest", "lattice", "nlme"] }, "apercu": { "name": "apercu", @@ -39533,13 +39935,13 @@ "name": "aphid", "version": "1.3.5", "sha256": "1pwr1i3wxh0l24cqp59q6n59p21v81fmgxkb4jmf50a3ggb1lcdj", - "depends": ["kmer", "openssl", "Rcpp"] + "depends": ["Rcpp", "kmer", "openssl"] }, "aphylo": { "name": "aphylo", "version": "0.3-3", "sha256": "1blvj2mz1pdsypxak78pmck097ryzaz24y4flzs5k5djqxgpjwnm", - "depends": ["ape", "coda", "fmcmc", "MASS", "Matrix", "Rcpp", "xml2"] + "depends": ["MASS", "Matrix", "Rcpp", "ape", "coda", "fmcmc", "xml2"] }, "api2lm": { "name": "api2lm", @@ -39593,19 +39995,19 @@ "name": "apollo", "version": "0.3.3", "sha256": "0mlvizr7kf308y431vkdf04p64srkgd7hwbypkw68yz37r1k13za", - "depends": ["bgw", "cli", "coda", "Deriv", "matrixStats", "maxLik", "mnormt", "mvtnorm", "numDeriv", "randtoolbox", "Rcpp", "RcppArmadillo", "RcppEigen", "RSGHB", "Rsolnp", "stringr", "tibble"] + "depends": ["Deriv", "RSGHB", "Rcpp", "RcppArmadillo", "RcppEigen", "Rsolnp", "bgw", "cli", "coda", "matrixStats", "maxLik", "mnormt", "mvtnorm", "numDeriv", "randtoolbox", "stringr", "tibble"] }, "appRiori": { "name": "appRiori", "version": "0.0.5", "sha256": "1phy2v2dxk4gdzx1m2a3gghcwyb7iaj0csybpvpk3vl99difkfxd", - "depends": ["dplyr", "DT", "hypr", "markdown", "MASS", "pracma", "rhandsontable", "shiny", "shinythemes", "sortable", "stringr"] + "depends": ["DT", "MASS", "dplyr", "hypr", "markdown", "pracma", "rhandsontable", "shiny", "shinythemes", "sortable", "stringr"] }, "appeears": { "name": "appeears", "version": "1.1", "sha256": "1igrbp6mgflgxn9f63d738zzhgsdsvlgwbgidlbqy82v4i4q326p", - "depends": ["geojsonio", "getPass", "httr", "jsonlite", "keyring", "memoise", "R6", "rstudioapi", "sf"] + "depends": ["R6", "geojsonio", "getPass", "httr", "jsonlite", "keyring", "memoise", "rstudioapi", "sf"] }, "appleadsR": { "name": "appleadsR", @@ -39613,17 +40015,11 @@ "sha256": "19xkzykk6zdbswdkfix9nqnfgab4r9c21rqwpma1r6fjapsp81jf", "depends": ["jsonlite"] }, - "appler": { - "name": "appler", - "version": "0.2.1", - "sha256": "0y0nj8ac6cm1qvbzy2w93j638s0f4mj2b1b9g2rw046rrf7maiz4", - "depends": ["httr", "jsonlite", "rvest"] - }, "applicable": { "name": "applicable", "version": "0.1.1", "sha256": "0n459qg3lv088f9yjym33nqi6ahq8whdbc2f0p5m1srvzbqka3mq", - "depends": ["dplyr", "ggplot2", "glue", "hardhat", "Matrix", "proxyC", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Matrix", "dplyr", "ggplot2", "glue", "hardhat", "proxyC", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "appnn": { "name": "appnn", @@ -39683,13 +40079,7 @@ "name": "apsimx", "version": "2.7.7", "sha256": "18q9lynfy0y7abp2zlclp75xcixd022m9hqqaqjh6z7wy9z3rxbs", - "depends": ["DBI", "jsonlite", "knitr", "RSQLite", "xml2"] - }, - "apt": { - "name": "apt", - "version": "3.0", - "sha256": "14njvpf6q34nffm3r9gqcszlabzbydsxqj0ln9nk4mv59izp8sqm", - "depends": ["car", "erer", "urca"] + "depends": ["DBI", "RSQLite", "jsonlite", "knitr", "xml2"] }, "apyramid": { "name": "apyramid", @@ -39697,10 +40087,16 @@ "sha256": "0i1wkqnf1n5x7y7i116gr7y215aibklcnhb7rm76g8wm7241y3vk", "depends": ["dplyr", "forcats", "ggplot2", "glue", "rlang", "scales", "tidyselect"] }, + "aqfig": { + "name": "aqfig", + "version": "0.9", + "sha256": "0pqg54bch6xjd1ybqciil1w52b7bi6d3q41dqafi830zvmq0hb11", + "depends": ["geoR"] + }, "aqp": { "name": "aqp", - "version": "2.0.3", - "sha256": "1rpa1zhcl5j8zl3hj8pb68vzyggdmbgnl9ss3vz3z7z57hsrngc2", + "version": "2.0.4", + "sha256": "0p43q6xvvks0f424h1rgzwx3ykpb4wrh5xd24khpkxwwigmm5jc4", "depends": ["cluster", "data_table", "farver", "lattice", "sp", "stringr"] }, "aquodom": { @@ -39737,7 +40133,7 @@ "name": "arc", "version": "1.4", "sha256": "0wlp6c2mbsa5fygc4iy0ixgqz49zzcz2mr66sapy1nm0wri1dvdr", - "depends": ["arules", "discretization", "Matrix", "R_utils"] + "depends": ["Matrix", "R_utils", "arules", "discretization"] }, "arcgeocoder": { "name": "arcgeocoder", @@ -39747,21 +40143,21 @@ }, "arcgis": { "name": "arcgis", - "version": "0.1.0", - "sha256": "0vgixd9pv312h9c2afrslrmzh2jcx4r17iki15x8i9zhhgq5dw7y", - "depends": ["arcgislayers", "arcgisutils", "cli", "httr2"] + "version": "0.1.1", + "sha256": "04k22569xsdl8bsi3r1bfwcdrjcdypm4b6sbjyf7yrglyyyqlpq3", + "depends": ["arcgisgeocode", "arcgislayers", "arcgisplaces", "arcgisutils", "cli", "httr2"] }, "arcgisgeocode": { "name": "arcgisgeocode", - "version": "0.1.0", - "sha256": "0fz4gk6yml6scycrdw1fyhvrs63hp0k8li2yjym037kb91qc8b0p", - "depends": ["arcgisutils", "cli", "curl", "httr2", "jsonify", "RcppSimdJson", "rlang", "sf"] + "version": "0.2.1", + "sha256": "0mnkp50k02p10nk4wbwyilldzwdhcfkiqv2w85spir5kip670j8m", + "depends": ["RcppSimdJson", "arcgisutils", "cli", "curl", "httr2", "jsonify", "rlang", "sf"] }, "arcgislayers": { "name": "arcgislayers", - "version": "0.2.0", - "sha256": "0micx725r6ln7i0xnrw4543qfrynvjqhg8081vi4falj2zbniz48", - "depends": ["arcgisutils", "cli", "httr2", "jsonify", "lifecycle", "RcppSimdJson", "rlang", "sf", "terra"] + "version": "0.3.0", + "sha256": "02zx66iszhw2kik0yg4djzlig6rc505igp3ginxhfcnb04blbz53", + "depends": ["RcppSimdJson", "arcgisutils", "arcpbf", "cli", "httr2", "jsonify", "lifecycle", "rlang", "sf", "terra"] }, "arcgisplaces": { "name": "arcgisplaces", @@ -39773,7 +40169,7 @@ "name": "arcgisutils", "version": "0.3.0", "sha256": "0553xmamgcaswnjyq0ayyfgvwl1kijrq0jan80m23kgydgi46hkv", - "depends": ["cli", "dbplyr", "httr2", "RcppSimdJson", "rlang", "sf"] + "depends": ["RcppSimdJson", "cli", "dbplyr", "httr2", "rlang", "sf"] }, "archdata": { "name": "archdata", @@ -39783,8 +40179,8 @@ }, "archeoViz": { "name": "archeoViz", - "version": "1.3.4", - "sha256": "12hrj059gavzydzywdn6knzyh75d5q34mi16a9jmbf2i3bm4fj5s", + "version": "1.3.5", + "sha256": "1xx6ai74ps70ljx9pcaa5qjvqayvdjw79pk200jgjcxd3ykqiwhz", "depends": ["cxhull", "ggplot2", "htmlwidgets", "knitr", "mgcv", "plotly", "reshape2", "shiny", "shinythemes", "svglite"] }, "archeofrag": { @@ -39797,7 +40193,7 @@ "name": "archetypal", "version": "1.3.1", "sha256": "1acz5fz5azhz3kq8zsxpp8k04jh2jmvlx0phcwlvvzhr0xs8lln3", - "depends": ["doParallel", "entropy", "geometry", "inflection", "lpSolve", "Matrix", "plot3D"] + "depends": ["Matrix", "doParallel", "entropy", "geometry", "inflection", "lpSolve", "plot3D"] }, "archetyper": { "name": "archetyper", @@ -39815,7 +40211,7 @@ "name": "archiDART", "version": "3.4", "sha256": "1wvjlg2rwy39czf3qqh9igk9rmk9i7pxa9yl5x9yqmsagwd1av3n", - "depends": ["geometry", "gtools", "sp", "XML"] + "depends": ["XML", "geometry", "gtools", "sp"] }, "archive": { "name": "archive", @@ -39833,7 +40229,7 @@ "name": "archivist", "version": "2.3.6", "sha256": "0q1qysack30xzxdbvvi56rk7r85hsj4ghls9r70ki7bl3rqwr4c9", - "depends": ["DBI", "digest", "flock", "httr", "lubridate", "magrittr", "RCurl", "RSQLite"] + "depends": ["DBI", "RCurl", "RSQLite", "digest", "flock", "httr", "lubridate", "magrittr"] }, "archivist_github": { "name": "archivist.github", @@ -39843,15 +40239,15 @@ }, "arcpbf": { "name": "arcpbf", - "version": "0.1.0", - "sha256": "0mmr5q5j4i9qq8m7ybgjz6m40g0qq0z24cznygrsi01kas11s8qd", - "depends": ["rlang"] + "version": "0.1.4", + "sha256": "1bbkcvi982xkjwjadfxc73rmip9hwlh3x0iyqms3pzfs1p32ansr", + "depends": ["arcgisutils", "rlang"] }, "arcpullr": { "name": "arcpullr", "version": "0.2.9", "sha256": "1kkfksv7d9firyiwsyaxg1radzvcrxi26krx63hd9p52697ajxm8", - "depends": ["dplyr", "DT", "ggplot2", "httr", "jsonlite", "raster", "rlang", "sf", "tidyr"] + "depends": ["DT", "dplyr", "ggplot2", "httr", "jsonlite", "raster", "rlang", "sf", "tidyr"] }, "arcpy": { "name": "arcpy", @@ -39917,7 +40313,7 @@ "name": "arenar", "version": "0.2.0", "sha256": "08b865v7ringqzm5m4ib4nrmlyqywir6bjj7alzmg06dy7mrl9s7", - "depends": ["auditor", "DALEX", "fairmodels", "gistr", "iBreakDown", "ingredients", "jsonlite", "plumber"] + "depends": ["DALEX", "auditor", "fairmodels", "gistr", "iBreakDown", "ingredients", "jsonlite", "plumber"] }, "arf": { "name": "arf", @@ -39935,7 +40331,7 @@ "name": "argo", "version": "3.0.2", "sha256": "17ys6v2n84fp38zkc43whfgbc8qq1qx41q14899qgglz7xv4axzn", - "depends": ["boot", "glmnet", "Matrix", "XML", "xtable", "xts", "zoo"] + "depends": ["Matrix", "XML", "boot", "glmnet", "xtable", "xts", "zoo"] }, "argoFloats": { "name": "argoFloats", @@ -39965,7 +40361,7 @@ "name": "argparse", "version": "2.2.3", "sha256": "0x16zp6jh9asyval1kwkxzavwjhx3a47xzlc593kw1hz4bhw8355", - "depends": ["findpython", "jsonlite", "R6"] + "depends": ["R6", "findpython", "jsonlite"] }, "argparser": { "name": "argparser", @@ -40005,15 +40401,15 @@ }, "arkhe": { "name": "arkhe", - "version": "1.6.0", - "sha256": "0d6di3a17zjr468prj2bpi1ls0cqg46gks10irn2qdjifwiy6r4z", + "version": "1.7.0", + "sha256": "1ray8scf2w9bgxkrkwi11iashphg4xbbgb7crbxcw7zf1pk03zi8", "depends": [] }, "arm": { "name": "arm", "version": "1.14-4", "sha256": "1g8732naydqyv5pq1fkyb1i6qddv62jdmn2ys5lbdvx2zq5cnns2", - "depends": ["abind", "coda", "lme4", "MASS", "Matrix", "nlme"] + "depends": ["MASS", "Matrix", "abind", "coda", "lme4", "nlme"] }, "armspp": { "name": "armspp", @@ -40031,7 +40427,7 @@ "name": "aroma.affymetrix", "version": "3.2.2", "sha256": "0h4w7i7hrkfvlkphxz9c0hbaxz455pzx0sb7y3zvsh9ykr3wkq8q", - "depends": ["aroma_apd", "aroma_core", "future", "listenv", "MASS", "matrixStats", "R_cache", "R_devices", "R_filesets", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["MASS", "R_cache", "R_devices", "R_filesets", "R_methodsS3", "R_oo", "R_utils", "aroma_apd", "aroma_core", "future", "listenv", "matrixStats"] }, "aroma_apd": { "name": "aroma.apd", @@ -40043,13 +40439,13 @@ "name": "aroma.cn", "version": "1.7.1", "sha256": "0mfdwq4qsca80vcak56vnwgkhmjvdgj8dvpmv2a83z7ishk52kk4", - "depends": ["aroma_core", "future_apply", "matrixStats", "PSCBS", "R_cache", "R_filesets", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["PSCBS", "R_cache", "R_filesets", "R_methodsS3", "R_oo", "R_utils", "aroma_core", "future_apply", "matrixStats"] }, "aroma_core": { "name": "aroma.core", "version": "3.3.1", "sha256": "0i2yh0w7hjljgsbn00vy9wyh03470f5xgqnahm7b83km16jvq9ps", - "depends": ["BiocManager", "future", "listenv", "matrixStats", "PSCBS", "R_cache", "R_devices", "R_filesets", "R_methodsS3", "R_oo", "R_rsp", "R_utils", "RColorBrewer"] + "depends": ["BiocManager", "PSCBS", "RColorBrewer", "R_cache", "R_devices", "R_filesets", "R_methodsS3", "R_oo", "R_rsp", "R_utils", "future", "listenv", "matrixStats"] }, "arpr": { "name": "arpr", @@ -40067,7 +40463,7 @@ "name": "arrangements", "version": "1.1.9", "sha256": "0nrlyxgn6667l2rb1q5rvps1anld9aq88qqr3ch2i6zchnqxrdg9", - "depends": ["gmp", "R6"] + "depends": ["R6", "gmp"] }, "arrayhelpers": { "name": "arrayhelpers", @@ -40077,9 +40473,9 @@ }, "arrow": { "name": "arrow", - "version": "16.1.0", - "sha256": "1vz7vjm8j1k1ng2za3y1qdsrzhbx2p6zy48vsas6bkdywxp5ihb6", - "depends": ["assertthat", "bit64", "cpp11", "glue", "purrr", "R6", "rlang", "tidyselect", "vctrs"] + "version": "17.0.0", + "sha256": "10nagwqbz3f04r5yl2zqjwfc9ynyi2784gp10i5fflwagp0fcgkf", + "depends": ["R6", "assertthat", "bit64", "cpp11", "glue", "purrr", "rlang", "tidyselect", "vctrs"] }, "arrowheadr": { "name": "arrowheadr", @@ -40127,13 +40523,13 @@ "name": "arules", "version": "1.7-7", "sha256": "183isw4sy5gv5fxajiy4pm5p3nfd1pffa4h8sisl2nrw2rig9na2", - "depends": ["generics", "Matrix"] + "depends": ["Matrix", "generics"] }, "arulesCBA": { "name": "arulesCBA", "version": "1.2.7", "sha256": "0d8nfqbk3y4vw5n3xnns2gy9jwj07a1zbaag9n0hmxrcs8m5ml83", - "depends": ["arules", "discretization", "glmnet", "Matrix"] + "depends": ["Matrix", "arules", "discretization", "glmnet"] }, "arulesNBMiner": { "name": "arulesNBMiner", @@ -40151,7 +40547,7 @@ "name": "arulesViz", "version": "1.5.3", "sha256": "1alma9fk92y55zrxr1a5ri2gpkn8kp2wbc3i2vqkmwj48za1a29j", - "depends": ["arules", "dplyr", "DT", "ggplot2", "ggraph", "igraph", "plotly", "scatterplot3d", "seriation", "tibble", "tidyr", "vcd", "visNetwork"] + "depends": ["DT", "arules", "dplyr", "ggplot2", "ggraph", "igraph", "plotly", "scatterplot3d", "seriation", "tibble", "tidyr", "vcd", "visNetwork"] }, "asaur": { "name": "asaur", @@ -40179,15 +40575,15 @@ }, "asciiSetupReader": { "name": "asciiSetupReader", - "version": "2.5.1", - "sha256": "1g21yycql1ik02gp37d0m5fxsn9d7sibxn5vm1ngmynx2a8a8jq7", + "version": "2.5.2", + "sha256": "116xj2d4hbvf0hgac0nqja758chgyf3ycivj0h3pmb0y75dlcbl9", "depends": ["data_table", "haven", "miniUI", "readr", "rstudioapi", "shiny", "stringr", "vroom", "zoo"] }, "asciicast": { "name": "asciicast", "version": "2.3.1", "sha256": "0gvdl2yc2fdfl2r5304c6f13qzzcgjaac7gic0pas8j7abrji1ss", - "depends": ["cli", "curl", "jsonlite", "magick", "processx", "tibble", "V8", "withr"] + "depends": ["V8", "cli", "curl", "jsonlite", "magick", "processx", "tibble", "withr"] }, "asciichartr": { "name": "asciichartr", @@ -40229,13 +40625,13 @@ "name": "ashapesampler", "version": "1.0.0", "sha256": "03x0vffik7k0cccr4m70ap4nl1zw2zp5iy3nr260dgivxlj49kxk", - "depends": ["alphahull", "alphashape3d", "doParallel", "dplyr", "foreach", "pracma", "Rvcg", "TDA", "truncnorm"] + "depends": ["Rvcg", "TDA", "alphahull", "alphashape3d", "doParallel", "dplyr", "foreach", "pracma", "truncnorm"] }, "ashr": { "name": "ashr", "version": "2.2-63", "sha256": "1japskxfdsg91jwgf5knlwy9iaq4ziqvyvlvjch1y3ygsdz9b8bz", - "depends": ["etrunct", "invgamma", "Matrix", "mixsqp", "Rcpp", "SQUAREM", "truncnorm"] + "depends": ["Matrix", "Rcpp", "SQUAREM", "etrunct", "invgamma", "mixsqp", "truncnorm"] }, "asht": { "name": "asht", @@ -40259,19 +40655,19 @@ "name": "aslib", "version": "0.1.2", "sha256": "1hy0ncanc3mb20yrby8s9hd8v2fg3x41vkj0jwl2b8znzl5n5b2n", - "depends": ["batchtools", "BBmisc", "checkmate", "corrplot", "data_table", "ggplot2", "llama", "mlr", "parallelMap", "ParamHelpers", "plyr", "reshape2", "RWeka", "stringr", "yaml"] + "depends": ["BBmisc", "ParamHelpers", "RWeka", "batchtools", "checkmate", "corrplot", "data_table", "ggplot2", "llama", "mlr", "parallelMap", "plyr", "reshape2", "stringr", "yaml"] }, "asm": { "name": "asm", "version": "0.2.0", "sha256": "0irxfkhd344jk31lwp6zgvwpgi6v72y6xbpp5q20zj8220ck4ms8", - "depends": ["fdrtool", "Iso", "MASS", "pracma", "quantreg"] + "depends": ["Iso", "MASS", "fdrtool", "pracma", "quantreg"] }, "asmbPLS": { "name": "asmbPLS", "version": "1.0.0", "sha256": "08f4128abvy9pdkbdgiqnhm2v7f79lqbzp1132h52zq2n9wzxzmy", - "depends": ["ggplot2", "ggpubr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "ggpubr"] }, "asnipe": { "name": "asnipe", @@ -40301,13 +40697,13 @@ "name": "aspline", "version": "0.2.0", "sha256": "1a68x6jvsaxviy2w361f19iqzsdsaf9kcqw5cknf4yz9fvkqhjny", - "depends": ["dplyr", "ggplot2", "magrittr", "mgcv", "Rcpp", "rlang", "splines2", "tidyr"] + "depends": ["Rcpp", "dplyr", "ggplot2", "magrittr", "mgcv", "rlang", "splines2", "tidyr"] }, "asremlPlus": { "name": "asremlPlus", - "version": "4.4.32", - "sha256": "0javb5hlg007jb30sdv48hqa2yfdjmjr8vpynm6x02npz8kn528d", - "depends": ["dae", "devtools", "doParallel", "dplyr", "foreach", "ggplot2", "nloptr", "qqplotr", "RColorBrewer", "reshape2", "rlang", "sticky", "stringr", "tryCatchLog"] + "version": "4.4.35", + "sha256": "016xxl928pdwpglmm3gg0rq4y04nlzbla46k7a6nmfsfygyz8gxv", + "depends": ["RColorBrewer", "dae", "devtools", "doParallel", "dplyr", "foreach", "ggplot2", "nloptr", "qqplotr", "reshape2", "rlang", "sticky", "stringr", "tryCatchLog"] }, "r_assert": { "name": "assert", @@ -40331,7 +40727,7 @@ "name": "assertr", "version": "3.0.1", "sha256": "0g7h88kkls6v1nfzbar40y56yv3lkqb7vrcy63xqgc99zcf8k4bc", - "depends": ["dplyr", "MASS", "rlang"] + "depends": ["MASS", "dplyr", "rlang"] }, "assertthat": { "name": "assertthat", @@ -40343,13 +40739,13 @@ "name": "assessor", "version": "1.1.0", "sha256": "1qpa2fd1ajk395x4chmarj6l50m4jaf5951qy1a79ncaa8f8g3x9", - "depends": ["MASS", "np", "tweedie", "VGAM"] + "depends": ["MASS", "VGAM", "np", "tweedie"] }, "assignPOP": { "name": "assignPOP", "version": "1.3.0", "sha256": "0p282yyszjamvzfsrjhy5c4jbfixvf4fafj6k47k2dgpx6wsdrqx", - "depends": ["caret", "doParallel", "e1071", "foreach", "ggplot2", "MASS", "randomForest", "reshape2", "rlang", "stringr", "tree"] + "depends": ["MASS", "caret", "doParallel", "e1071", "foreach", "ggplot2", "randomForest", "reshape2", "rlang", "stringr", "tree"] }, "assignR": { "name": "assignR", @@ -40379,13 +40775,13 @@ "name": "ast2ast", "version": "0.3.2", "sha256": "1vsnd7w0z0wr4185wg6k7xjd4xc8qsm08f4wfgcnyd79x56wczky", - "depends": ["dfdr", "purrr", "R6", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "dfdr", "purrr", "rlang"] }, "asteRisk": { "name": "asteRisk", "version": "1.4.3", "sha256": "0rfbm5c2lgs921ncajsjyyxzfiqls40xlxqp2pwp7c0rxhiz2rd6", - "depends": ["deSolve", "nanotime", "onion", "Rcpp", "RcppParallel"] + "depends": ["Rcpp", "RcppParallel", "deSolve", "nanotime", "onion"] }, "aster": { "name": "aster", @@ -40409,7 +40805,7 @@ "name": "astrochron", "version": "1.3", "sha256": "1vviz16yfqnqkvrb0sb7348a7xqvqi3cfdyxhlksm08g4rr3w8ar", - "depends": ["doParallel", "fields", "foreach", "IDPmisc", "iterators", "multitaper", "palinsol", "viridisLite"] + "depends": ["IDPmisc", "doParallel", "fields", "foreach", "iterators", "multitaper", "palinsol", "viridisLite"] }, "astrodatR": { "name": "astrodatR", @@ -40465,12 +40861,6 @@ "sha256": "0g8z0nqjp4a9lxvdmzhyx1sqvdrkd9vd0b3i3qjbm4a542jf0aga", "depends": [] }, - "async": { - "name": "async", - "version": "0.3.2", - "sha256": "0xf3c6gr04drv7xxzpshycd13h5lm7r529f5q4ajrsl0m3hp9xpv", - "depends": ["iterors", "later", "nseval", "promises", "stringr", "testthat"] - }, "atRisk": { "name": "atRisk", "version": "0.1.0", @@ -40487,13 +40877,13 @@ "name": "atable", "version": "0.1.14", "sha256": "1dyg7zc19518dp3yxgyhcfklkmard9iwjkbnsl6sx5wkyk3s0vin", - "depends": ["DescTools", "doBy", "effsize", "Hmisc", "plyr", "reshape2", "settings"] + "depends": ["DescTools", "Hmisc", "doBy", "effsize", "plyr", "reshape2", "settings"] }, "atakrig": { "name": "atakrig", "version": "0.9.8.1", "sha256": "0dzqghs2358hqyklvfblil5ww9d5nmx406invlx5fgqy4k0zcyzf", - "depends": ["doSNOW", "FNN", "foreach", "gstat", "MASS", "Rcpp", "sf", "snow", "terra"] + "depends": ["FNN", "MASS", "Rcpp", "doSNOW", "foreach", "gstat", "sf", "snow", "terra"] }, "atime": { "name": "atime", @@ -40517,7 +40907,7 @@ "name": "atom4R", "version": "0.3-3", "sha256": "08n9apmliwri1vyqwfvyqi7m8b9nj7zpi1vg8gcqlg17skxndm2m", - "depends": ["httr", "jsonlite", "keyring", "R6", "rdflib", "readr", "XML", "zip"] + "depends": ["R6", "XML", "httr", "jsonlite", "keyring", "rdflib", "readr", "zip"] }, "atpolR": { "name": "atpolR", @@ -40533,8 +40923,8 @@ }, "attachment": { "name": "attachment", - "version": "0.4.1", - "sha256": "1ba5116193psx8yzfw00v4l441a5wdwsxi03wkizqccmc2j62b6g", + "version": "0.4.2", + "sha256": "1plc7mplqky5als8gzp01g55378smikxx6l42b2xyp9knxxprysg", "depends": ["cli", "desc", "glue", "knitr", "magrittr", "rmarkdown", "roxygen2", "stringr", "withr", "yaml"] }, "attempt": { @@ -40565,7 +40955,7 @@ "name": "auRoc", "version": "0.2-1", "sha256": "152jdvzigcplii5amj0mnral3g2jyy3rfsc745mx36sspw1396yx", - "depends": ["coda", "MBESS", "ProbYX", "rjags"] + "depends": ["MBESS", "ProbYX", "coda", "rjags"] }, "auctestr": { "name": "auctestr", @@ -40607,25 +40997,25 @@ "name": "audrex", "version": "2.0.1", "sha256": "1ifijkbqvdjp1si14p80mbqhq7sby8qgzr181agm3da1nkmic3vp", - "depends": ["fANCOVA", "ggplot2", "imputeTS", "lubridate", "Metrics", "modeest", "moments", "narray", "purrr", "rBayesianOptimization", "readr", "scales", "stringr", "tictoc", "xgboost"] + "depends": ["Metrics", "fANCOVA", "ggplot2", "imputeTS", "lubridate", "modeest", "moments", "narray", "purrr", "rBayesianOptimization", "readr", "scales", "stringr", "tictoc", "xgboost"] }, "audubon": { "name": "audubon", "version": "0.5.2", "sha256": "1j6v05qal9f6ci1awb5c1vdl59sdp0472kdm5azvjsibic6bi2m8", - "depends": ["dplyr", "magrittr", "Matrix", "memoise", "purrr", "readr", "rlang", "stringi", "V8"] + "depends": ["Matrix", "V8", "dplyr", "magrittr", "memoise", "purrr", "readr", "rlang", "stringi"] }, "augSIMEX": { "name": "augSIMEX", "version": "3.7.4", "sha256": "0620yxqi160ar91shl5macn890zpc60c9nqy4w8i6m7sskv6gl3z", - "depends": ["Formula", "MASS", "nleqslv", "Rcpp"] + "depends": ["Formula", "MASS", "Rcpp", "nleqslv"] }, "augmentedRCBD": { "name": "augmentedRCBD", "version": "0.1.7", "sha256": "1gnl6i81m5w7hxi147ycr963sm661xscw0xb6wm9vcr043ddvx3p", - "depends": ["cli", "dplyr", "emmeans", "flextable", "ggplot2", "mathjaxr", "moments", "multcomp", "multcompView", "numform", "officer", "openxlsx", "Rdpack", "reshape2", "stringi"] + "depends": ["Rdpack", "cli", "dplyr", "emmeans", "flextable", "ggplot2", "mathjaxr", "moments", "multcomp", "multcompView", "numform", "officer", "openxlsx", "reshape2", "stringi"] }, "auk": { "name": "auk", @@ -40635,15 +41025,15 @@ }, "aum": { "name": "aum", - "version": "2023.6.14", - "sha256": "1y6wn8ycl4vvmzyjkyprxah7q5afa56bpj8xvgmvi6dahnfp52cq", - "depends": ["data_table", "Rcpp"] + "version": "2024.6.19", + "sha256": "0ybvjp7mwwji1ybf4br7y3l20fccg6sl70wjgc5ii8qa4sgr9hq4", + "depends": ["Rcpp", "data_table"] }, "ausplotsR": { "name": "ausplotsR", "version": "2.0.5", "sha256": "0zxzxzhhdmzcvn2kvvmkgrizyx73h4wc7daysjsp54zv8krlh4x9", - "depends": ["betapart", "curl", "ggplot2", "gtools", "httr", "jose", "jsonlite", "mapdata", "plyr", "progress", "R_utils", "r2r", "stringr", "vegan"] + "depends": ["R_utils", "betapart", "curl", "ggplot2", "gtools", "httr", "jose", "jsonlite", "mapdata", "plyr", "progress", "r2r", "stringr", "vegan"] }, "auth0": { "name": "auth0", @@ -40661,7 +41051,7 @@ "name": "autoBagging", "version": "0.1.0", "sha256": "01k44rgkpbbr3m2x360aq0fz2qi7nz036g5dsh2y3jy94rmddbyy", - "depends": ["abind", "caret", "cluster", "CORElearn", "e1071", "entropy", "infotheo", "lsr", "MASS", "minerva", "party", "rpart", "xgboost"] + "depends": ["CORElearn", "MASS", "abind", "caret", "cluster", "e1071", "entropy", "infotheo", "lsr", "minerva", "party", "rpart", "xgboost"] }, "autoCovariateSelection": { "name": "autoCovariateSelection", @@ -40679,37 +41069,37 @@ "name": "autoFC", "version": "0.2.0.1001", "sha256": "08q3d2gcjwg36wy7lk8bkhv9i8cayckayslx30zbkypbhabh8bqm", - "depends": ["dplyr", "glue", "irrCAC", "lavaan", "MASS", "MplusAutomation", "SimDesign", "thurstonianIRT", "tidyr"] + "depends": ["MASS", "MplusAutomation", "SimDesign", "dplyr", "glue", "irrCAC", "lavaan", "thurstonianIRT", "tidyr"] }, "autoFRK": { "name": "autoFRK", "version": "1.4.3", "sha256": "1k3h2gsck06dnvrifg9rhxi6b3fwfjrkvg0q2wzb9kdnnzgiwcln", - "depends": ["fields", "filehash", "filehashSQLite", "filematrix", "FNN", "LatticeKrig", "MASS", "mgcv", "Rcpp", "RcppEigen", "RcppParallel", "RSpectra", "spam"] + "depends": ["FNN", "LatticeKrig", "MASS", "RSpectra", "Rcpp", "RcppEigen", "RcppParallel", "fields", "filehash", "filehashSQLite", "filematrix", "mgcv", "spam"] }, "autoGO": { "name": "autoGO", "version": "0.9.1", "sha256": "19gy5gk214vqnil2wky2fpia1dlhcc4vwnws4fl2f0xq9as2nrq9", - "depends": ["ape", "ComplexHeatmap", "DESeq2", "dichromat", "dplyr", "enrichR", "ggplot2", "ggrepel", "GSVA", "imguR", "openxlsx", "purrr", "RColorBrewer", "readr", "reshape2", "stringr", "SummarizedExperiment", "textshape", "tidyr", "tidyselect"] + "depends": ["ComplexHeatmap", "DESeq2", "GSVA", "RColorBrewer", "SummarizedExperiment", "ape", "dichromat", "dplyr", "enrichR", "ggplot2", "ggrepel", "imguR", "openxlsx", "purrr", "readr", "reshape2", "stringr", "textshape", "tidyr", "tidyselect"] }, "autoMFA": { "name": "autoMFA", "version": "1.0.0", "sha256": "1sbcl38cq7y7hln1qffk5s71xgg9hs7dlwyvynqf96z2z2421pw4", - "depends": ["abind", "expm", "MASS", "Matrix", "pracma", "Rdpack", "Rfast", "usethis"] + "depends": ["MASS", "Matrix", "Rdpack", "Rfast", "abind", "expm", "pracma", "usethis"] }, "autoMrP": { "name": "autoMrP", "version": "1.0.6", "sha256": "00shy2yjkhys59nvxwd0smr5bzkfrg55xq6rcmc5z7f6c07wygci", - "depends": ["doParallel", "doRNG", "dplyr", "e1071", "EBMAforecast", "forcats", "foreach", "gbm", "ggplot2", "glmmLasso", "knitr", "lme4", "purrr", "rlang", "stringr", "tibble", "tidyr", "vglmer"] + "depends": ["EBMAforecast", "doParallel", "doRNG", "dplyr", "e1071", "forcats", "foreach", "gbm", "ggplot2", "glmmLasso", "knitr", "lme4", "purrr", "rlang", "stringr", "tibble", "tidyr", "vglmer"] }, "autoRasch": { "name": "autoRasch", "version": "0.2.2", "sha256": "15vgmpvcw7hi1i5kaqj9q126qmfa54h8ay9w6wa7yxjbginp9v7c", - "depends": ["doParallel", "foreach", "lavaan", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "lavaan"] }, "autoReg": { "name": "autoReg", @@ -40721,25 +41111,19 @@ "name": "autoScorecard", "version": "0.3.0", "sha256": "03zq23x7gha02zvmb5vwmv1pz54ghcfr0sk75krh59cgprx5ysl5", - "depends": ["corrplot", "discretization", "ggplot2", "infotheo", "ROCR", "rpart"] + "depends": ["ROCR", "corrplot", "discretization", "ggplot2", "infotheo", "rpart"] }, "autoTS": { "name": "autoTS", "version": "0.9.11", "sha256": "1mwpazynp5hdc2ccnhvddkajfcd4qam23pvjl9accq1rnxzxkiyv", - "depends": ["dplyr", "forecast", "ggplot2", "lubridate", "magrittr", "plotly", "prophet", "RcppRoll", "rlang", "shiny", "shinycssloaders", "tidyr"] - }, - "autocart": { - "name": "autocart", - "version": "1.4.5", - "sha256": "1zgcmrm4dkdnr130hwwka2nwdczgvc3jc9hxrb6nfs8ijb24gl36", - "depends": ["fields", "mgcv", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["RcppRoll", "dplyr", "forecast", "ggplot2", "lubridate", "magrittr", "plotly", "prophet", "rlang", "shiny", "shinycssloaders", "tidyr"] }, "autocogs": { "name": "autocogs", "version": "0.1.4", "sha256": "0v27l9a0ysj7x9wjka1jl1bq9rmxmzldclcp1w59a6807wjlszhx", - "depends": ["broom", "checkmate", "diptest", "dplyr", "ggplot2", "hexbin", "MASS", "mclust", "moments", "progress", "tibble"] + "depends": ["MASS", "broom", "checkmate", "diptest", "dplyr", "ggplot2", "hexbin", "mclust", "moments", "progress", "tibble"] }, "autoharp": { "name": "autoharp", @@ -40751,13 +41135,13 @@ "name": "autohrf", "version": "1.1.3", "sha256": "1p65rl3bm5ka2pfjni3bil9linhvr50c99sg8d5240nj9nqdylj0", - "depends": ["cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "gtools", "lubridate", "magrittr", "RColorBrewer"] + "depends": ["RColorBrewer", "cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "gtools", "lubridate", "magrittr"] }, "autoimage": { "name": "autoimage", "version": "2.2.3", "sha256": "1jhkd7mbig6wpyc69iynfrj5i62lrwcwqbgjkmq8b9p5raglm1g2", - "depends": ["colorspace", "fields", "ggplot2", "mapproj", "maps", "MBA"] + "depends": ["MBA", "colorspace", "fields", "ggplot2", "mapproj", "maps"] }, "autokeras": { "name": "autokeras", @@ -40787,7 +41171,7 @@ "name": "autonewsmd", "version": "0.0.8", "sha256": "1wax4npyzkxjl1avgg6m275744nnpbv3qk8sbjg0dkqp58cb33lx", - "depends": ["data_table", "git2r", "magrittr", "quarto", "R6"] + "depends": ["R6", "data_table", "git2r", "magrittr", "quarto"] }, "autoplotly": { "name": "autoplotly", @@ -40805,7 +41189,7 @@ "name": "autostats", "version": "0.4.1", "sha256": "1283m1b5bllzfsilsjkk0sj8l1wsjpvnq1vk7r20gnd8nf6kybmn", - "depends": ["broom", "broom_mixed", "Ckmeans_1d_dp", "data_table", "dials", "dplyr", "framecleaner", "ggeasy", "ggplot2", "ggthemes", "gtools", "igraph", "janitor", "jtools", "magrittr", "nnet", "parsnip", "party", "patchwork", "presenter", "purrr", "recipes", "recosystem", "rlang", "rlist", "rsample", "stringr", "tibble", "tidyr", "tidyselect", "tune", "workflows", "xgboost", "yardstick"] + "depends": ["Ckmeans_1d_dp", "broom", "broom_mixed", "data_table", "dials", "dplyr", "framecleaner", "ggeasy", "ggplot2", "ggthemes", "gtools", "igraph", "janitor", "jtools", "magrittr", "nnet", "parsnip", "party", "patchwork", "presenter", "purrr", "recipes", "recosystem", "rlang", "rlist", "rsample", "stringr", "tibble", "tidyr", "tidyselect", "tune", "workflows", "xgboost", "yardstick"] }, "autostsm": { "name": "autostsm", @@ -40817,19 +41201,25 @@ "name": "autothresholdr", "version": "1.4.2", "sha256": "1fkny4i1fpy5fkya52cw4bzpdi236smq4qq23q1zdba3srmpyzsl", - "depends": ["checkmate", "ijtiff", "magrittr", "purrr", "Rcpp", "rlang", "strex", "stringr"] + "depends": ["Rcpp", "checkmate", "ijtiff", "magrittr", "purrr", "rlang", "strex", "stringr"] + }, + "autovi": { + "name": "autovi", + "version": "0.4.0", + "sha256": "1f0pmcqjzb4w10693khakva84dn32k01a655c5r4xf1n86vvq2jv", + "depends": ["bandicoot", "cassowaryr", "cli", "ggplot2", "reticulate", "tibble"] }, "av": { "name": "av", - "version": "0.9.0", - "sha256": "0zyp6dh4kl717w68i417byya5j43h44rql11ihi88x47c9dxbirp", + "version": "0.9.1", + "sha256": "0j2ajlkncdw181i2psmpahgmpxjkcg4ph2zp6iqb3nx5cyj441a3", "depends": [] }, "available": { "name": "available", "version": "1.1.0", "sha256": "1j6z0zwd7xjk6j6wk74fjq3nhx9gk7ys09i543gakcskmdm59dw4", - "depends": ["cli", "clisymbols", "crayon", "desc", "glue", "jsonlite", "memoise", "SnowballC", "stringdist", "tibble", "tidytext", "yesno"] + "depends": ["SnowballC", "cli", "clisymbols", "crayon", "desc", "glue", "jsonlite", "memoise", "stringdist", "tibble", "tidytext", "yesno"] }, "avar": { "name": "avar", @@ -40851,9 +41241,9 @@ }, "avidaR": { "name": "avidaR", - "version": "1.2.0", - "sha256": "12z2cs5cayj72c6nx5y086m823grcmhq5m24aaqx4qn36lb6cdbb", - "depends": ["base64enc", "circlize", "curl", "dplyr", "httr", "R6", "RColorBrewer", "readr", "tibble", "tidyr", "xml2"] + "version": "1.2.1", + "sha256": "1rm37lsmi5cyrkdpb55hr5m1pklwv5czzk4m1dzqzdvn4qp95ms7", + "depends": ["R6", "RColorBrewer", "base64enc", "circlize", "curl", "dplyr", "httr", "readr", "tibble", "tidyr", "xml2"] }, "avocado": { "name": "avocado", @@ -40863,15 +41253,15 @@ }, "avotrex": { "name": "avotrex", - "version": "1.2.0", - "sha256": "013j4av3hwxfh68myfpvxhzs2zsr470x81j90hh8bqmjs3a1wmlf", - "depends": ["ape", "doParallel", "doSNOW", "dplyr", "foreach", "phytools", "snow", "stringr", "tidytree", "TreeTools"] + "version": "1.3.0", + "sha256": "1qr9yhwrllpk0drg3s1r4f5hsx78yfys6nyj2vdk70n8na102243", + "depends": ["TreeTools", "ape", "doParallel", "doSNOW", "dplyr", "foreach", "phytools", "snow", "stringr", "tidytree"] }, "aweSOM": { "name": "aweSOM", "version": "1.3", "sha256": "0nfbn7rgazvc5nljf8i7bwpxy5j0w404bnrvi02k97jvmrra1dyb", - "depends": ["bslib", "cluster", "data_table", "DT", "e1071", "fields", "foreign", "ggplot2", "haven", "htmltools", "htmlwidgets", "kernlab", "kohonen", "rclipboard", "RColorBrewer", "readODS", "readxl", "rmarkdown", "shiny", "viridis"] + "depends": ["DT", "RColorBrewer", "bslib", "cluster", "data_table", "e1071", "fields", "foreign", "ggplot2", "haven", "htmltools", "htmlwidgets", "kernlab", "kohonen", "rclipboard", "readODS", "readxl", "rmarkdown", "shiny", "viridis"] }, "aweek": { "name": "aweek", @@ -40995,9 +41385,9 @@ }, "b64": { "name": "b64", - "version": "0.1.0", - "sha256": "1zj5zfd5dpzmzzkh2x51qpdfl1dzbimsd83fp8fsr6yh66c66xzq", - "depends": ["blob", "cli", "rlang"] + "version": "0.1.2", + "sha256": "0r4g2xikfczfhhv74jz8pp0q7rxzi789s3qqrfrq2rvi6pm9lnna", + "depends": [] }, "bRacatus": { "name": "bRacatus", @@ -41021,7 +41411,7 @@ "name": "bSims", "version": "0.3-2", "sha256": "1aflarz69rk4dlrp5gmgi6hs6mx0m8xhpp7ppv6m5gsjf8g18iaf", - "depends": ["deldir", "intrval", "MASS", "mefa4", "pbapply"] + "depends": ["MASS", "deldir", "intrval", "mefa4", "pbapply"] }, "bWGR": { "name": "bWGR", @@ -41051,7 +41441,7 @@ "name": "babelmixr2", "version": "0.1.2", "sha256": "0b6xa7hwx9h5n7z8xw4q7shwpzjf7kf9cfrsy68qvm8mhns0j9x1", - "depends": ["checkmate", "cli", "digest", "lotri", "nlmixr2", "nlmixr2est", "nonmem2rx", "qs", "Rcpp", "RcppArmadillo", "RcppEigen", "rex", "rxode2", "rxode2parse"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "checkmate", "cli", "digest", "lotri", "nlmixr2", "nlmixr2est", "nonmem2rx", "qs", "rex", "rxode2", "rxode2parse"] }, "babelwhale": { "name": "babelwhale", @@ -41059,6 +41449,12 @@ "sha256": "0m5q83ykz5w1fsjsk2vyrnv21cg4n075kbvfvw4k22c61p78shdl", "depends": ["crayon", "digest", "dplyr", "dynutils", "fs", "glue", "processx", "purrr"] }, + "babette": { + "name": "babette", + "version": "2.3.4", + "sha256": "1hir478scnfm87j2r6f48sr9sxwv2n9b6vcmwjvq58m6s0j8mzfi", + "depends": ["beastier", "beautier", "mauricer", "phangorn", "rlang", "stringr", "tracerer", "xml2"] + }, "babynames": { "name": "babynames", "version": "1.0.1", @@ -41081,13 +41477,13 @@ "name": "backShift", "version": "0.1.4.3", "sha256": "1dhmq51w07vcqlngsb04ip0wqbgqq2xdfdm1w82r082f07ywqb16", - "depends": ["clue", "ggplot2", "igraph", "MASS", "matrixcalc", "reshape2"] + "depends": ["MASS", "clue", "ggplot2", "igraph", "matrixcalc", "reshape2"] }, "backbone": { "name": "backbone", "version": "2.1.4", "sha256": "05b493cfzi85hnczl56d81sc7j5xfwybsmnc4i4q984sw0gpgvll", - "depends": ["igraph", "Matrix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "igraph"] }, "backpipe": { "name": "backpipe", @@ -41123,7 +41519,7 @@ "name": "badgen", "version": "1.0.0", "sha256": "0gbafiah9bsxjq2av25003d752w5s9bh7syphl58rsr34l57qkja", - "depends": ["jsonlite", "V8"] + "depends": ["V8", "jsonlite"] }, "badger": { "name": "badger", @@ -41149,17 +41545,23 @@ "sha256": "0fcd54j6vci2yvlb609dck4pwbn54irkdk472cjc965rcw6dz9z7", "depends": ["data_table", "doSNOW", "dplyr", "foreach", "outliertree", "rlist"] }, + "baggingbwsel": { + "name": "baggingbwsel", + "version": "1.1", + "sha256": "0za7a7l4dzg0djzdrrz9axry61h8m41qkgay37ymy4lfkdwawjcx", + "depends": ["Rcpp", "doParallel", "foreach", "kedd", "mclust", "misc3d", "nor1mix", "sm"] + }, "baggr": { "name": "baggr", "version": "0.7.8", "sha256": "18faz6b8llzxsrm60bnsanplc8d7knb8cmcz34nyai7i7022061k", - "depends": ["bayesplot", "BH", "crayon", "forestplot", "ggplot2", "ggplotify", "ggrepel", "gridExtra", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "testthat"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "crayon", "forestplot", "ggplot2", "ggplotify", "ggrepel", "gridExtra", "rstan", "rstantools", "testthat"] }, "baguette": { "name": "baguette", "version": "1.0.2", "sha256": "01pxk9angq2yrw3j5c748qhcdq92axpml5lr9cpf74a8hpg6ddjb", - "depends": ["butcher", "C50", "dials", "dplyr", "furrr", "generics", "hardhat", "magrittr", "parsnip", "purrr", "rlang", "rpart", "rsample", "tibble", "tidyr", "withr"] + "depends": ["C50", "butcher", "dials", "dplyr", "furrr", "generics", "hardhat", "magrittr", "parsnip", "purrr", "rlang", "rpart", "rsample", "tibble", "tidyr", "withr"] }, "bagyo": { "name": "bagyo", @@ -41189,7 +41591,7 @@ "name": "bakR", "version": "1.0.1", "sha256": "070gv5s78381cq8pagggicxx065hab99v2vgvii996b5svs6rjic", - "depends": ["BH", "data_table", "dplyr", "ggplot2", "Hmisc", "magrittr", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tidyr"] + "depends": ["BH", "Hmisc", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "data_table", "dplyr", "ggplot2", "magrittr", "purrr", "rstan", "rstantools", "tidyr"] }, "bakeoff": { "name": "bakeoff", @@ -41201,13 +41603,13 @@ "name": "baker", "version": "1.0.3", "sha256": "0k564q7v6pvf6w3qs5cmdbhxjjqg2kqm9yr7ckvd23wbl0gm5rdv", - "depends": ["abind", "binom", "coda", "ggplot2", "ggpubr", "gridExtra", "lubridate", "mgcv", "mvbutils", "R2jags", "reshape2", "rjags", "robCompositions", "shinydashboard", "shinyFiles"] + "depends": ["R2jags", "abind", "binom", "coda", "ggplot2", "ggpubr", "gridExtra", "lubridate", "mgcv", "mvbutils", "reshape2", "rjags", "robCompositions", "shinyFiles", "shinydashboard"] }, "baldur": { "name": "baldur", "version": "0.0.3", "sha256": "13nl5apdmb1pm32d58qq04vc2xngc35n6cv4sivf2s34yk4k0n4c", - "depends": ["BH", "dplyr", "ggplot2", "lifecycle", "magrittr", "multidplyr", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rlang", "rstan", "rstantools", "StanHeaders", "stringr", "tibble", "tidyr", "viridisLite"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "dplyr", "ggplot2", "lifecycle", "magrittr", "multidplyr", "purrr", "rlang", "rstan", "rstantools", "stringr", "tibble", "tidyr", "viridisLite"] }, "bama": { "name": "bama", @@ -41223,21 +41625,21 @@ }, "bamdit": { "name": "bamdit", - "version": "3.4.0", - "sha256": "0x7dl2f8qg8df07g4k692501rqn3q5zf12npx9zbbbvv7zb23rlf", - "depends": ["ggExtra", "ggplot2", "gridExtra", "MASS", "R2jags", "rjags"] + "version": "3.4.1", + "sha256": "01530avwkhhvpdwr0kc50y67klqlzr6zxc2njfwy8imgy3yvg842", + "depends": ["MASS", "R2jags", "ggExtra", "ggplot2", "gridExtra", "rjags"] }, "bamlss": { "name": "bamlss", "version": "1.2-4", "sha256": "1prx8mw3n9a66s1fk616g12s0wwbxf3239256skys66csd9wzmh8", - "depends": ["coda", "colorspace", "distributions3", "Formula", "Matrix", "MBA", "mgcv", "mvtnorm", "sp", "survival"] + "depends": ["Formula", "MBA", "Matrix", "coda", "colorspace", "distributions3", "mgcv", "mvtnorm", "sp", "survival"] }, "bamm": { "name": "bamm", - "version": "0.4.3", - "sha256": "1dda2inq8afcp09qwqjfkg572glkw9rpf6c477wcrslkcnlpkc9x", - "depends": ["animation", "dplyr", "furrr", "future", "igraph", "leaflet", "magrittr", "Matrix", "purrr", "raster", "Rcpp", "RcppArmadillo", "Rdpack", "RSpectra", "sp"] + "version": "0.5.0", + "sha256": "1m48bszhqhzsjnr70pv5lmx19x13gm9nfg1idcr2jrn87xcm8mlb", + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "Rdpack", "animation", "crosstalk", "dplyr", "furrr", "future", "igraph", "leaflet", "magrittr", "plotly", "purrr", "raster", "sp"] }, "bamp": { "name": "bamp", @@ -41277,8 +41679,8 @@ }, "bang": { "name": "bang", - "version": "1.0.3", - "sha256": "1zgxgpiqszgnmbqb1dd1d3na11bam56fw9qlz1kfxkr0n8pxic0w", + "version": "1.0.4", + "sha256": "0v2iwy52knvsnr2ldcdqm1z99ag047fxbch56nvs6mki6zbn1vwf", "depends": ["bayesplot", "rust"] }, "bangladesh": { @@ -41307,15 +41709,15 @@ }, "baorista": { "name": "baorista", - "version": "0.1.4", - "sha256": "1ljqkplhnfxcs0jvmg589x7j00pciqk829vg5gi4c2i69yxd7mc1", + "version": "0.2.0", + "sha256": "044p2r5wmpm8l8q1z1g3a7x15bclcbgjb2a3qvl0438div8y5llz", "depends": ["coda", "nimble"] }, "bapred": { "name": "bapred", "version": "1.1", "sha256": "1pnhq1li0c4pvgvwsaxxzsgbdyjnb96s1hciqanzgbd1d4577lvp", - "depends": ["affy", "affyPLM", "Biobase", "FNN", "fuzzyRankTests", "glmnet", "lme4", "MASS", "mnormt", "sva"] + "depends": ["Biobase", "FNN", "MASS", "affy", "affyPLM", "fuzzyRankTests", "glmnet", "lme4", "mnormt", "sva"] }, "barcode": { "name": "barcode", @@ -41345,7 +41747,7 @@ "name": "bartMachine", "version": "1.3.4.1", "sha256": "12abi19nd07lvclxpa73ba21sbrll67bbp0a8vz8wnj2ym8542iv", - "depends": ["bartMachineJARs", "missForest", "randomForest", "rJava"] + "depends": ["bartMachineJARs", "missForest", "rJava", "randomForest"] }, "bartMachineJARs": { "name": "bartMachineJARs", @@ -41355,15 +41757,15 @@ }, "bartMan": { "name": "bartMan", - "version": "0.1.0", - "sha256": "09pmkqbvgw9l95c36izdmi3h8pjx7vmzmfak2hll4q6npl5fr27x", - "depends": ["BART", "bartMachine", "cli", "colorspace", "cowplot", "dbarts", "DendSer", "dplyr", "ggiraph", "ggnewscale", "ggplot2", "ggraph", "gtable", "igraph", "patchwork", "purrr", "rJava", "rlang", "rrapply", "scales", "tibble", "tidybayes", "tidygraph", "tidyr", "tidytreatment"] + "version": "0.1.1", + "sha256": "10g9ymfjnjzykrxkws4iayzz69mi4a5vjba49js740ds6i1r3zq5", + "depends": ["BART", "DendSer", "bartMachine", "cli", "colorspace", "cowplot", "dbarts", "dplyr", "ggiraph", "ggnewscale", "ggplot2", "ggraph", "gtable", "igraph", "patchwork", "purrr", "rJava", "rlang", "rrapply", "scales", "tibble", "tidybayes", "tidygraph", "tidyr", "tidytreatment"] }, "bartcs": { "name": "bartcs", "version": "1.2.2", "sha256": "0kajw5phkymvkilwb7bf3qdc24h369yvb1zmc49kk6k7bdpbxcrr", - "depends": ["coda", "ggcharts", "ggplot2", "invgamma", "MCMCpack", "Rcpp", "rlang", "rootSolve"] + "depends": ["MCMCpack", "Rcpp", "coda", "ggcharts", "ggplot2", "invgamma", "rlang", "rootSolve"] }, "basad": { "name": "basad", @@ -41399,19 +41801,19 @@ "name": "baseballr", "version": "1.6.0", "sha256": "0qsr6di5y1a3z28rxpzk6k8b5rbnh08pdcjv65qa0fci3yx1i15y", - "depends": ["cli", "data_table", "dplyr", "ggplot2", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "purrr", "Rcpp", "RcppParallel", "rlang", "rvest", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppParallel", "cli", "data_table", "dplyr", "ggplot2", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "purrr", "rlang", "rvest", "stringr", "tibble", "tidyr"] }, "basecamb": { "name": "basecamb", "version": "1.1.5", "sha256": "0jxlh04f3pqxb0ihp8241z91fka4hi3d3g41ya927japps5dpvhr", - "depends": ["assertthat", "dplyr", "Hmisc", "MASS", "mice", "purrr", "sae", "survival"] + "depends": ["Hmisc", "MASS", "assertthat", "dplyr", "mice", "purrr", "sae", "survival"] }, "basedosdados": { "name": "basedosdados", "version": "0.2.2", "sha256": "18gfk7hivp68mgbgx60qbpcy28ysj4llzwdji5a57rrczwffr6p0", - "depends": ["bigrquery", "cli", "DBI", "dbplyr", "dotenv", "dplyr", "fs", "glue", "httr", "magrittr", "purrr", "readr", "rlang", "scales", "stringr", "tibble", "typed", "writexl"] + "depends": ["DBI", "bigrquery", "cli", "dbplyr", "dotenv", "dplyr", "fs", "glue", "httr", "magrittr", "purrr", "readr", "rlang", "scales", "stringr", "tibble", "typed", "writexl"] }, "basefun": { "name": "basefun", @@ -41423,7 +41825,7 @@ "name": "baseline", "version": "1.3-5", "sha256": "0l0llb3pi89ixkpvfg5vbvwwv3gzldf0g98rrd3vkm7q26rqmmd2", - "depends": ["limSolve", "SparseM"] + "depends": ["SparseM", "limSolve"] }, "basemaps": { "name": "basemaps", @@ -41471,31 +41873,31 @@ "name": "basictabler", "version": "1.0.2", "sha256": "0d5gpvf3la0fky786z74i8q7il1mmb2prg8y9wslg2gbngnkvkvm", - "depends": ["dplyr", "htmltools", "htmlwidgets", "R6"] + "depends": ["R6", "dplyr", "htmltools", "htmlwidgets"] }, "basifoR": { "name": "basifoR", "version": "0.4", "sha256": "1clnmb57g7aclgw8ibj92pfixaism0af85w4kn0208nbm75c1kvf", - "depends": ["curl", "foreign", "Hmisc", "httr", "measurements", "RODBC"] + "depends": ["Hmisc", "RODBC", "curl", "foreign", "httr", "measurements"] }, "basket": { "name": "basket", "version": "0.10.11", "sha256": "1kmz53v8k1wyjg33dsf05p57ym2zq3d0f373wp85bnrwx00nfr10", - "depends": ["cli", "crayon", "dplyr", "foreach", "GenSA", "ggplot2", "ggraph", "gridExtra", "igraph", "itertools", "RColorBrewer", "tibble", "tidygraph", "tidyr"] + "depends": ["GenSA", "RColorBrewer", "cli", "crayon", "dplyr", "foreach", "ggplot2", "ggraph", "gridExtra", "igraph", "itertools", "tibble", "tidygraph", "tidyr"] }, "baskexact": { "name": "baskexact", "version": "1.0.1", "sha256": "1825avqbbf8zkk9fps0i450zwl3j0armbnblndl9q954g2wzdhs4", - "depends": ["arrangements", "doFuture", "extraDistr", "foreach", "ggplot2", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "arrangements", "doFuture", "extraDistr", "foreach", "ggplot2"] }, "basksim": { "name": "basksim", "version": "1.0.0", "sha256": "1vrav84fqkilmk0ww0gjr6hldxp7fpzgca2062jvrkzbyff05bx9", - "depends": ["arrangements", "bhmbasket", "bmabasket", "doFuture", "extraDistr", "foreach", "HDInterval", "progressr"] + "depends": ["HDInterval", "arrangements", "bhmbasket", "bmabasket", "doFuture", "extraDistr", "foreach", "progressr"] }, "batata": { "name": "batata", @@ -41519,7 +41921,7 @@ "name": "batchmix", "version": "2.2.1", "sha256": "1vsr4p3a03dx3kr2clzcnyvf6xfzyisfk87famfvssjb4g58bzrv", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "salso", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "salso", "tidyr"] }, "batchscr": { "name": "batchscr", @@ -41537,7 +41939,7 @@ "name": "batchtools", "version": "0.9.17", "sha256": "1rlvfk0279saf930z48g230p9z30dd7qil9aiprjn35px1advqdn", - "depends": ["backports", "base64url", "brew", "checkmate", "data_table", "digest", "fs", "progress", "R6", "rappdirs", "stringi", "withr"] + "depends": ["R6", "backports", "base64url", "brew", "checkmate", "data_table", "digest", "fs", "progress", "rappdirs", "stringi", "withr"] }, "bate": { "name": "bate", @@ -41567,19 +41969,19 @@ "name": "bayMDS", "version": "2.0", "sha256": "1l5srpaichn598a3a9pj7pwp35jvbwb65d37l9ngvdq3rja8xm0s", - "depends": ["ggplot2", "ggpubr", "progress", "Rcpp", "RcppArmadillo", "shiny", "shinythemes"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "ggpubr", "progress", "shiny", "shinythemes"] }, "bayclumpr": { "name": "bayclumpr", "version": "0.1.0", "sha256": "17yppw6m27d1smdbwrl9mja84y3p56s4sjw4c6hklxadcf4na8im", - "depends": ["deming", "IsoplotR", "loo", "rstan"] + "depends": ["IsoplotR", "deming", "loo", "rstan"] }, "baycn": { "name": "baycn", "version": "1.2.0", "sha256": "1ykz1brs3mz94n86d5qaq25vf24j5adyzpddxqmn7qklbxxr6fh5", - "depends": ["egg", "ggplot2", "gtools", "igraph", "MASS"] + "depends": ["MASS", "egg", "ggplot2", "gtools", "igraph"] }, "bayefdr": { "name": "bayefdr", @@ -41591,13 +41993,13 @@ "name": "bayes4psy", "version": "1.2.12", "sha256": "1i6yc871bbygj6sw2v2l0diiz03n3n4mw46n905fsjkpdrx8rfhj", - "depends": ["BH", "circular", "cowplot", "dplyr", "emg", "ggplot2", "mcmcse", "metRology", "Rcpp", "RcppEigen", "RcppParallel", "reshape", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "circular", "cowplot", "dplyr", "emg", "ggplot2", "mcmcse", "metRology", "reshape", "rstan", "rstantools"] }, "bayesAB": { "name": "bayesAB", "version": "1.1.3", "sha256": "1mwwbkd8mqm22mkbgrp5mq7i52qqjr9if09fnhb3ybdpqq3sdg73", - "depends": ["ggplot2", "Rcpp", "rlang"] + "depends": ["Rcpp", "ggplot2", "rlang"] }, "bayesCT": { "name": "bayesCT", @@ -41605,11 +42007,17 @@ "sha256": "0ragig1x34syhsnbnd58l2s7g23j7fb0cl9wkasvxq8cicw5hqgn", "depends": ["bayesDP", "dplyr", "magrittr", "purrr", "survival"] }, + "bayesCureRateModel": { + "name": "bayesCureRateModel", + "version": "1.1", + "sha256": "0klmlrglkisf82q050vnf8hpgj2yfnrpag43lff8z1yiqa4hzngi", + "depends": ["HDInterval", "Rcpp", "RcppArmadillo", "VGAM", "calculus", "coda", "doParallel", "flexsurv", "foreach", "mclust"] + }, "bayesDP": { "name": "bayesDP", "version": "1.3.6", "sha256": "0li063187icw96shrbawfa00vkb42m5y38a4j2aahryajjlsva57", - "depends": ["ggplot2", "MCMCpack", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["MCMCpack", "Rcpp", "RcppArmadillo", "ggplot2", "survival"] }, "bayesDccGarch": { "name": "bayesDccGarch", @@ -41621,13 +42029,13 @@ "name": "bayesEO", "version": "0.2.1", "sha256": "0zs4qqf8881x01wblzmnw7m3zmh4ifrim3a8ws454r2lxf4y7mj5", - "depends": ["dplyr", "ggplot2", "purrr", "Rcpp", "RcppArmadillo", "stars", "terra", "tibble", "tidyr", "tmap", "yaml"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "purrr", "stars", "terra", "tibble", "tidyr", "tmap", "yaml"] }, "bayesGAM": { "name": "bayesGAM", "version": "0.0.2", "sha256": "13zs68d26c66hkm8mfhcygk8rw6sdg4rf4a4az254lf2xvypbh5d", - "depends": ["bayesplot", "BH", "boot", "cluster", "corrplot", "geometry", "ggplot2", "gridExtra", "loo", "MASS", "mlbench", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "SemiPar", "StanHeaders"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "SemiPar", "StanHeaders", "bayesplot", "boot", "cluster", "corrplot", "geometry", "ggplot2", "gridExtra", "loo", "mlbench", "rstan", "rstantools"] }, "bayesGARCH": { "name": "bayesGARCH", @@ -41669,13 +42077,13 @@ "name": "bayesPO", "version": "0.5.0", "sha256": "0dav6kjasb7p0ks8fwd3r8pb7q8il39rmvpbgdb80c7k49azirhd", - "depends": ["coda", "Rcpp", "RcppEigen", "RcppProgress"] + "depends": ["Rcpp", "RcppEigen", "RcppProgress", "coda"] }, "bayesPop": { "name": "bayesPop", "version": "10.0-1", "sha256": "0jzxsqnrzvhz85wravjxbjwf6panwmylqgz99b0zknvgbf0vx6zh", - "depends": ["abind", "bayesLife", "bayesTFR", "data_table", "fields", "googleVis", "MortCast", "plyr", "reshape2", "rworldmap", "wpp2012", "wpp2019"] + "depends": ["MortCast", "abind", "bayesLife", "bayesTFR", "data_table", "fields", "googleVis", "plyr", "reshape2", "rworldmap", "wpp2012", "wpp2019"] }, "bayesQR": { "name": "bayesQR", @@ -41705,25 +42113,25 @@ "name": "bayesTFR", "version": "7.4-2", "sha256": "09fbyc4656dil6mqfzx7nlxxp0b95fmc73ibci60jbbzggafb51s", - "depends": ["coda", "data_table", "lifecycle", "MASS", "mvtnorm", "wpp2019"] + "depends": ["MASS", "coda", "data_table", "lifecycle", "mvtnorm", "wpp2019"] }, "bayesWatch": { "name": "bayesWatch", "version": "0.1.3", "sha256": "04kfx68cq5cjg1ykzl8i55prnw2mvqgnmgbjav5nv2rmh9psny61", - "depends": ["BDgraph", "BH", "CholWishart", "ess", "ggplot2", "gridExtra", "Hotelling", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["BDgraph", "BH", "CholWishart", "Hotelling", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "ess", "ggplot2", "gridExtra"] }, "bayesZIB": { "name": "bayesZIB", "version": "0.0.5", "sha256": "1265vnwmxxgahdccw81sirjb782z5pl3finf5gvmky3zgvj2p8kc", - "depends": ["BH", "ggplot2", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "ggplot2", "rstan", "rstantools"] }, "bayesammi": { "name": "bayesammi", "version": "0.1.0", "sha256": "1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs", - "depends": ["dplyr", "ggplot2", "lme4", "magrittr", "MASS", "mvtnorm", "rlang", "rstiefel", "scales", "tibble", "tidyr", "tmvtnorm"] + "depends": ["MASS", "dplyr", "ggplot2", "lme4", "magrittr", "mvtnorm", "rlang", "rstiefel", "scales", "tibble", "tidyr", "tmvtnorm"] }, "bayesanova": { "name": "bayesanova", @@ -41735,7 +42143,7 @@ "name": "bayesassurance", "version": "0.1.0", "sha256": "0y62q0340j3781f0l9azxdn6k4isj1zds6y50fg38a73pi7mbfbm", - "depends": ["dplyr", "ggplot2", "MASS", "mathjaxr", "pbapply", "plot3D", "plotly", "rlang"] + "depends": ["MASS", "dplyr", "ggplot2", "mathjaxr", "pbapply", "plot3D", "plotly", "rlang"] }, "bayesbio": { "name": "bayesbio", @@ -41753,7 +42161,7 @@ "name": "bayescopulareg", "version": "0.1.3", "sha256": "0jzj1iwd8g1kpypg6dl3anhay7kjvznfkyzri3sdf538s6vr88m5", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo", "RcppDist"] + "depends": ["Rcpp", "RcppArmadillo", "RcppDist", "mvtnorm"] }, "bayescount": { "name": "bayescount", @@ -41765,7 +42173,7 @@ "name": "bayesdfa", "version": "1.3.3", "sha256": "1xmvpkg30nk4sldzy3rp12ivnj4phzdw08hmk5nh5b70mqapvkra", - "depends": ["BH", "dplyr", "ggplot2", "loo", "mgcv", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rlang", "rstan", "rstantools", "StanHeaders", "viridisLite"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "ggplot2", "loo", "mgcv", "reshape2", "rlang", "rstan", "rstantools", "viridisLite"] }, "bayesdistreg": { "name": "bayesdistreg", @@ -41777,7 +42185,7 @@ "name": "bayesforecast", "version": "1.0.1", "sha256": "0wnz6qblm3ib7lpj860s4lhrs4gvmyrmk779r38rybfvxw4xssii", - "depends": ["astsa", "bayesplot", "BH", "bridgesampling", "forecast", "ggplot2", "gridExtra", "loo", "lubridate", "MASS", "prophet", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "zoo"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "astsa", "bayesplot", "bridgesampling", "forecast", "ggplot2", "gridExtra", "loo", "lubridate", "prophet", "rstan", "rstantools", "zoo"] }, "bayesian": { "name": "bayesian", @@ -41793,15 +42201,15 @@ }, "bayesianVARs": { "name": "bayesianVARs", - "version": "0.1.2", - "sha256": "05vx1v7znj12b1h1wks7azi2xrwhdzxjljjsshp3x5zmjm5kg169", - "depends": ["colorspace", "factorstochvol", "GIGrvg", "MASS", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppProgress", "scales", "stochvol"] + "version": "0.1.3", + "sha256": "04q140gpwk8wsybg4jcqdhxln6f4gbg5pca369rfi7yp3xffrbyp", + "depends": ["GIGrvg", "MASS", "Rcpp", "RcppArmadillo", "RcppProgress", "colorspace", "factorstochvol", "mvtnorm", "scales", "stochvol"] }, "bayeslm": { "name": "bayeslm", "version": "1.0.1", "sha256": "0mnzxzdz456qxfszl8vhnvb1875hxn8b57wi6dhr9g668da2zdin", - "depends": ["coda", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "coda"] }, "bayeslongitudinal": { "name": "bayeslongitudinal", @@ -41837,7 +42245,7 @@ "name": "bayesmove", "version": "0.2.1", "sha256": "1l6i8qh7l53x0133gjc5jvri4vnnfviq9y3mcr1kfa5j84gfnmsf", - "depends": ["dplyr", "dygraphs", "furrr", "future", "ggplot2", "leaflet", "lubridate", "magrittr", "MCMCpack", "progress", "progressr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "sf", "shiny", "tictoc", "tidyr"] + "depends": ["MCMCpack", "Rcpp", "RcppArmadillo", "dplyr", "dygraphs", "furrr", "future", "ggplot2", "leaflet", "lubridate", "magrittr", "progress", "progressr", "purrr", "rlang", "sf", "shiny", "tictoc", "tidyr"] }, "bayesnec": { "name": "bayesnec", @@ -41889,15 +42297,15 @@ }, "bayestestR": { "name": "bayestestR", - "version": "0.13.2", - "sha256": "15xnmjay0s9kgaj25z43cxky4qcjn3gv8yd1x548jzbxzxxma07n", + "version": "0.14.0", + "sha256": "10280l86a2wrlqjj8zh55pznvgjzpdzv6h3krxgg0ka19ch983zs", "depends": ["datawizard", "insight"] }, "bayesvl": { "name": "bayesvl", "version": "0.8.5", "sha256": "1gb2in8hjiqb3daqz6phn1639i6p2w641kxrm3zh4rm3d6hg6hzr", - "depends": ["bayesplot", "bnlearn", "coda", "dplyr", "ggplot2", "reshape2", "rstan", "StanHeaders", "viridis"] + "depends": ["StanHeaders", "bayesplot", "bnlearn", "coda", "dplyr", "ggplot2", "reshape2", "rstan", "viridis"] }, "bayfoxr": { "name": "bayfoxr", @@ -41921,12 +42329,12 @@ "name": "baystability", "version": "0.1.0", "sha256": "1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp", - "depends": ["dplyr", "ggfortify", "ggplot2", "lme4", "magrittr", "MASS", "matrixStats", "reshape2", "rlang", "rstiefel", "scales", "tibble", "tidyr", "tidyverse"] + "depends": ["MASS", "dplyr", "ggfortify", "ggplot2", "lme4", "magrittr", "matrixStats", "reshape2", "rlang", "rstiefel", "scales", "tibble", "tidyr", "tidyverse"] }, "baytrends": { "name": "baytrends", - "version": "2.0.11", - "sha256": "1kvp17a6q6d59lhpxs702403rp7hsl77l69vs6injrffzpz9si79", + "version": "2.0.12", + "sha256": "05gd8i6y5fvkx12v55drff0fqpkg7bs3qjcaqmmcid9sl4168ms8", "depends": ["dataRetrieval", "digest", "dplyr", "fitdistrplus", "knitr", "lubridate", "memoise", "mgcv", "pander", "plyr", "readxl", "sessioninfo", "survival"] }, "bazar": { @@ -41939,37 +42347,37 @@ "name": "bbdetection", "version": "1.0", "sha256": "1j6xcbfsrg3wcr1rpddj7ia33szn5bs0wk4mzq42d761clsr5qq8", - "depends": ["ggplot2", "Rcpp", "xtable", "zoo"] + "depends": ["Rcpp", "ggplot2", "xtable", "zoo"] }, "bbk": { "name": "bbk", - "version": "0.3.0", - "sha256": "0dhbpc051xs1mz778a56h269ykwnlgh33k4cj88c2mb2rifmw9fa", + "version": "0.4.0", + "sha256": "1dnr024app4xp7qj777vzia72jjc8ak128dcd27879cqfzixail5", "depends": ["httr2", "xml2"] }, "bbknnR": { "name": "bbknnR", "version": "1.1.1", "sha256": "0zwsk491pgfr0dxbpkw1zqa4fi4d8j1bdfiridxq6f07aypx8nmg", - "depends": ["future", "glmnet", "magrittr", "Matrix", "Rcpp", "RcppAnnoy", "reticulate", "rlang", "Rtsne", "Seurat", "SeuratObject", "tidytable", "uwot"] + "depends": ["Matrix", "Rcpp", "RcppAnnoy", "Rtsne", "Seurat", "SeuratObject", "future", "glmnet", "magrittr", "reticulate", "rlang", "tidytable", "uwot"] }, "bbl": { "name": "bbl", "version": "1.0.0", "sha256": "135i619lliy93dvgb7ymrcdh20y2b1j7s0y6awzcs3w0hbyd8j5z", - "depends": ["pROC", "RColorBrewer", "Rcpp"] + "depends": ["RColorBrewer", "Rcpp", "pROC"] }, "bbmix": { "name": "bbmix", "version": "1.0.0", "sha256": "088878222dvqmqrg5d4ny3rrpbvjw7npzrk0fmagvhj3z5dvd6la", - "depends": ["BH", "data_table", "R_utils", "Rcpp", "RcppEigen", "rmutil", "rstan", "StanHeaders"] + "depends": ["BH", "R_utils", "Rcpp", "RcppEigen", "StanHeaders", "data_table", "rmutil", "rstan"] }, "bbmle": { "name": "bbmle", "version": "1.0.25.1", "sha256": "02xnfmjr5ax5pc69jkxmygkwvb68flrf1x8pxfw0hk7y37w0qanr", - "depends": ["bdsmatrix", "lattice", "MASS", "Matrix", "mvtnorm", "numDeriv"] + "depends": ["MASS", "Matrix", "bdsmatrix", "lattice", "mvtnorm", "numDeriv"] }, "bbnet": { "name": "bbnet", @@ -41979,15 +42387,15 @@ }, "bbotk": { "name": "bbotk", - "version": "0.8.0", - "sha256": "1ggfl1lhvjnnkxib4svqd82agrvjcg1101cbf4g2c0kzgzm1jaj6", - "depends": ["checkmate", "data_table", "lgr", "mlr3misc", "paradox", "R6"] + "version": "1.0.1", + "sha256": "13kvqazlp3inxqzdm67q7hgjss8wib1hi3fbyx1zlm653zfc0sii", + "depends": ["R6", "checkmate", "data_table", "lgr", "mlr3misc", "paradox"] }, "bbreg": { "name": "bbreg", "version": "2.0.2", "sha256": "0mi2834v4cvrhvpnzkb4lgkqq993c3c1yzsxdnmny4p6yxw1q547", - "depends": ["expint", "Formula", "pbapply", "statmod"] + "depends": ["Formula", "expint", "pbapply", "statmod"] }, "bbw": { "name": "bbw", @@ -41999,13 +42407,13 @@ "name": "bc3net", "version": "1.0.4", "sha256": "15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h", - "depends": ["c3net", "igraph", "infotheo", "lattice", "Matrix"] + "depends": ["Matrix", "c3net", "igraph", "infotheo", "lattice"] }, "bcROCsurface": { "name": "bcROCsurface", "version": "1.0-6", "sha256": "0g0z4z3dw4mjp4dpa0d6bz46700jibixhlh2jj62z2l7qz5140cy", - "depends": ["boot", "nnet", "Rcpp", "RcppArmadillo", "rgl"] + "depends": ["Rcpp", "RcppArmadillo", "boot", "nnet", "rgl"] }, "bcaboot": { "name": "bcaboot", @@ -42029,13 +42437,13 @@ "name": "bcdata", "version": "0.4.1", "sha256": "05izx4bpk60icwnsy4698cm4dyxmmffss59dca8zrrh4i4pql72f", - "depends": ["cli", "crul", "DBI", "dbplyr", "dplyr", "glue", "jsonlite", "leaflet", "leaflet_extras", "purrr", "readr", "readxl", "rlang", "sf", "tibble", "tidyselect", "xml2"] + "depends": ["DBI", "cli", "crul", "dbplyr", "dplyr", "glue", "jsonlite", "leaflet", "leaflet_extras", "purrr", "readr", "readxl", "rlang", "sf", "tibble", "tidyselect", "xml2"] }, "bcf": { "name": "bcf", "version": "2.0.2", "sha256": "0a7279h7f3v23zbzqkpaxl9s2q1igfc3c5wcjpins8d7nk5hgfj4", - "depends": ["coda", "doParallel", "foreach", "Hmisc", "matrixStats", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Hmisc", "Rcpp", "RcppArmadillo", "RcppParallel", "coda", "doParallel", "foreach", "matrixStats"] }, "bcfrailph": { "name": "bcfrailph", @@ -42071,7 +42479,7 @@ "name": "bcpa", "version": "1.3.2", "sha256": "09n4grdz3vvm3744bggxv9qvnjbifh1hj31sc6s7a3189d1zhl4v", - "depends": ["plyr", "Rcpp"] + "depends": ["Rcpp", "plyr"] }, "bcputility": { "name": "bcputility", @@ -42101,7 +42509,7 @@ "name": "bdDwC", "version": "0.1.15", "sha256": "0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0", - "depends": ["shiny", "shinyBS", "shinydashboard", "shinyFiles", "shinyjs"] + "depends": ["shiny", "shinyBS", "shinyFiles", "shinydashboard", "shinyjs"] }, "bda": { "name": "bda", @@ -42113,7 +42521,7 @@ "name": "bdc", "version": "1.1.4", "sha256": "1z79bsg0jz5ffl47sjgxj2bigyhbn76m0kz9sqbzkph7srcc6vpr", - "depends": ["CoordinateCleaner", "dplyr", "DT", "foreach", "fs", "ggplot2", "here", "magrittr", "purrr", "qs", "readr", "rgnparser", "rnaturalearth", "sf", "stringdist", "stringi", "stringr", "taxadb", "tibble", "tidyselect"] + "depends": ["CoordinateCleaner", "DT", "dplyr", "foreach", "fs", "ggplot2", "here", "magrittr", "purrr", "qs", "readr", "rgnparser", "rnaturalearth", "sf", "stringdist", "stringi", "stringr", "taxadb", "tibble", "tidyselect"] }, "bde": { "name": "bde", @@ -42131,13 +42539,13 @@ "name": "bdlim", "version": "0.4.2", "sha256": "04qgmanb198abrkqfv4n0fk0zib3nad14s7pz85n4ws0252vk10r", - "depends": ["BayesLogit", "dplyr", "ggplot2", "LaplacesDemon", "tidyr"] + "depends": ["BayesLogit", "LaplacesDemon", "dplyr", "ggplot2", "tidyr"] }, "bdlp": { "name": "bdlp", "version": "0.9-2", "sha256": "14fxwgcn3g6k1cdimgfp6zmsgqi4s7sh6kapnls229qiin2nijjl", - "depends": ["DBI", "GenOrd", "MASS", "MultiOrd", "rgl", "RSQLite", "stringdist"] + "depends": ["DBI", "GenOrd", "MASS", "MultiOrd", "RSQLite", "rgl", "stringdist"] }, "bdots": { "name": "bdots", @@ -42149,7 +42557,7 @@ "name": "bdpar", "version": "3.1.0", "sha256": "063b4wwc476gx1gsb028b0fr5agf1n9ciagl5h28zx7ap3jnxmph", - "depends": ["digest", "R6", "rlist"] + "depends": ["R6", "digest", "rlist"] }, "bdpv": { "name": "bdpv", @@ -42183,8 +42591,8 @@ }, "bdsvd": { "name": "bdsvd", - "version": "0.1-0", - "sha256": "0jpli8mdrjbgcvgvj2rwac49147l7h91n2mbsi89pw7m5ydimvvp", + "version": "0.2.0", + "sha256": "02fhhwlnq31yzf0m3qyk14w1f9d4xn0ygnjcwx7m28z34l18547m", "depends": ["irlba"] }, "bdvis": { @@ -42197,7 +42605,7 @@ "name": "bea.R", "version": "1.0.6", "sha256": "15pdbwz7av8862bl144n998qk0w9rqwip9m2brdm5hj7id5xdlif", - "depends": ["chron", "colorspace", "data_table", "DT", "ggplot2", "googleVis", "gtable", "htmltools", "htmlwidgets", "httpuv", "httr", "jsonlite", "magrittr", "munsell", "plyr", "Rcpp", "scales", "shiny", "shinydashboard", "stringi", "stringr", "xtable", "yaml"] + "depends": ["DT", "Rcpp", "chron", "colorspace", "data_table", "ggplot2", "googleVis", "gtable", "htmltools", "htmlwidgets", "httpuv", "httr", "jsonlite", "magrittr", "munsell", "plyr", "scales", "shiny", "shinydashboard", "stringi", "stringr", "xtable", "yaml"] }, "beadplexr": { "name": "beadplexr", @@ -42209,7 +42617,7 @@ "name": "beakr", "version": "0.4.3", "sha256": "0l6475l5d58g5ahz4b3vrdlvl656p2rasni17gz4y1l2rd0pvvh4", - "depends": ["base64enc", "httpuv", "jsonlite", "magrittr", "mime", "R6", "stringr", "webutils"] + "depends": ["R6", "base64enc", "httpuv", "jsonlite", "magrittr", "mime", "stringr", "webutils"] }, "beanplot": { "name": "beanplot", @@ -42227,7 +42635,7 @@ "name": "beanz", "version": "3.1", "sha256": "1rv4pil8hfykp35impw980riijwgrqxv9v528w1mmq1gyy25wjhl", - "depends": ["BH", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "survival"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "loo", "rstan", "rstantools", "survival"] }, "bearishTrader": { "name": "bearishTrader", @@ -42245,7 +42653,13 @@ "name": "beastier", "version": "2.5.1", "sha256": "1crdi1pmz7gf75089czvvfi31i67i6z0zak9vdppc9bwyrcj1j7f", - "depends": ["ape", "beautier", "phangorn", "rappdirs", "readr", "rJava", "rlang", "sessioninfo", "stringr", "tibble", "xml2"] + "depends": ["ape", "beautier", "phangorn", "rJava", "rappdirs", "readr", "rlang", "sessioninfo", "stringr", "tibble", "xml2"] + }, + "beastt": { + "name": "beastt", + "version": "0.0.1", + "sha256": "0xgz9xjanybnc2fi0fqc9i0zq80y87rnll62q98nk08f919h7xs1", + "depends": ["cli", "cobalt", "distributional", "dplyr", "generics", "ggdist", "ggplot2", "mixtools", "purrr", "rlang", "stringr", "tidyr"] }, "beautier": { "name": "beautier", @@ -42263,13 +42677,19 @@ "name": "bedr", "version": "1.0.7", "sha256": "0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j", - "depends": ["data_table", "R_utils", "testthat", "VennDiagram", "yaml"] + "depends": ["R_utils", "VennDiagram", "data_table", "testthat", "yaml"] + }, + "beeca": { + "name": "beeca", + "version": "0.1.3", + "sha256": "1q20chw6l690fjpyaagl8h12dzna2kjyfq3l676s3w65sba7gyh0", + "depends": ["dplyr", "lifecycle", "sandwich"] }, "beepr": { "name": "beepr", - "version": "1.3", - "sha256": "061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp", - "depends": ["audio", "stringr"] + "version": "2.0", + "sha256": "0xq4qs06f61m1q6gb157n4c3j7pf7wanh27nr2lr228s7k4mw3k2", + "depends": ["audio"] }, "beeswarm": { "name": "beeswarm", @@ -42299,7 +42719,7 @@ "name": "behaviorchange", "version": "0.5.5", "sha256": "1nvmrl5nif10kw1risfsmvdlc4q6bkcfxpw26vwanm6ks3lamdc3", - "depends": ["BiasedUrn", "data_tree", "DiagrammeR", "DiagrammeRsvg", "ggplot2", "googlesheets4", "gridExtra", "gtable", "knitr", "rmdpartials", "ufs", "viridis", "yum"] + "depends": ["BiasedUrn", "DiagrammeR", "DiagrammeRsvg", "data_tree", "ggplot2", "googlesheets4", "gridExtra", "gtable", "knitr", "rmdpartials", "ufs", "viridis", "yum"] }, "behavr": { "name": "behavr", @@ -42321,9 +42741,9 @@ }, "bellreg": { "name": "bellreg", - "version": "0.0.2", - "sha256": "11h65f7g9amndx6z5qbws97nm4ng6bjazh29mj01qhqcfvgngvrr", - "depends": ["BH", "dplyr", "extraDistr", "Formula", "LambertW", "loo", "magic", "MASS", "numbers", "purrr", "Rcpp", "RcppEigen", "Rdpack", "rstan", "rstantools", "StanHeaders"] + "version": "0.0.2.1", + "sha256": "0576yipaj3a7j159nvp5hmlarvrkxm8pa990iasymg5s4vjfi3n7", + "depends": ["BH", "Formula", "LambertW", "MASS", "Rcpp", "RcppEigen", "Rdpack", "StanHeaders", "dplyr", "extraDistr", "loo", "magic", "numbers", "purrr", "rstan", "rstantools"] }, "bench": { "name": "bench", @@ -42341,7 +42761,7 @@ "name": "benchmarkme", "version": "1.0.8", "sha256": "0qaz8wy3n08k9lr8qljk5i8z8db18scbdc8m734aymd307h00w8x", - "depends": ["benchmarkmeData", "doParallel", "dplyr", "foreach", "httr", "Matrix", "stringr", "tibble"] + "depends": ["Matrix", "benchmarkmeData", "doParallel", "dplyr", "foreach", "httr", "stringr", "tibble"] }, "benchmarkmeData": { "name": "benchmarkmeData", @@ -42359,7 +42779,7 @@ "name": "bender", "version": "0.1.1", "sha256": "07npksrj094h884lli0fjvwjc1lhcwzlsk9wx82761mka5xajv4v", - "depends": ["httr", "jsonlite", "R6"] + "depends": ["R6", "httr", "jsonlite"] }, "benford": { "name": "benford", @@ -42377,7 +42797,7 @@ "name": "bennu", "version": "0.3.0", "sha256": "04vgpk549fr5wwg11f5979iqd40yqamdch46vwxb57wxhraphcxy", - "depends": ["BH", "dplyr", "ggplot2", "glue", "lifecycle", "magrittr", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "scales", "StanHeaders", "tidybayes", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "ggplot2", "glue", "lifecycle", "magrittr", "rlang", "rstan", "rstantools", "scales", "tidybayes", "tidyr"] }, "bentcableAR": { "name": "bentcableAR", @@ -42401,19 +42821,19 @@ "name": "bespatial", "version": "0.1.2", "sha256": "1sbgi4dcddjwgs4dzwn3zf91kx07kr5vc9dblvijgfasqhpfjv5m", - "depends": ["belg", "comat", "landscapemetrics", "Rcpp", "RcppArmadillo", "terra", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "belg", "comat", "landscapemetrics", "terra", "tibble"] }, "bestNormalize": { "name": "bestNormalize", "version": "1.9.1", "sha256": "1lryl23jvf51n7ka58ncwhjglk0zzm18wik962h403j4mph1jjly", - "depends": ["butcher", "doParallel", "doRNG", "dplyr", "foreach", "generics", "LambertW", "nortest", "purrr", "recipes", "tibble"] + "depends": ["LambertW", "butcher", "doParallel", "doRNG", "dplyr", "foreach", "generics", "nortest", "purrr", "recipes", "tibble"] }, "bestSDP": { "name": "bestSDP", "version": "0.1.2", "sha256": "1rff6jij9wmlpalzilvid8jvj2pczrchx0yrg0vhy00j64zg6jzs", - "depends": ["dplyr", "DT", "ggplot2", "readxl", "rlist", "shiny", "shinyBS", "shinydashboard", "shinyjs", "shinythemes", "shinyWidgets", "stringr", "tidyr"] + "depends": ["DT", "dplyr", "ggplot2", "readxl", "rlist", "shiny", "shinyBS", "shinyWidgets", "shinydashboard", "shinyjs", "shinythemes", "stringr", "tidyr"] }, "bestglm": { "name": "bestglm", @@ -42431,13 +42851,13 @@ "name": "bestridge", "version": "1.0.7", "sha256": "10nlk1vrzmgxfia9b3skmg5594ab5s3d64k2awyxybkz2pzz7gb1", - "depends": ["MASS", "Matrix", "pheatmap", "Rcpp", "RcppEigen", "survival"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "pheatmap", "survival"] }, "betaBayes": { "name": "betaBayes", "version": "1.0.1", "sha256": "1a7ng6ym47scgj47frrhs76r6ipq6mhgf3ivbg2npqpg7hjcz2ci", - "depends": ["betareg", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "betareg"] }, "betaDelta": { "name": "betaDelta", @@ -42473,7 +42893,7 @@ "name": "betaclust", "version": "1.0.3", "sha256": "1w76c7yxgnc98p6lwh5mxrrgv1kk5dgjgp12g0vs25l4fb7advqp", - "depends": ["doParallel", "foreach", "ggplot2", "plotly", "pROC", "scales"] + "depends": ["doParallel", "foreach", "ggplot2", "pROC", "plotly", "scales"] }, "betafunctions": { "name": "betafunctions", @@ -42495,9 +42915,9 @@ }, "betareg": { "name": "betareg", - "version": "3.1-4", - "sha256": "00c1l5ah74vf7ljpja4iwyf9cwcvb1c835hmc98jp2x6jrh9h1ji", - "depends": ["flexmix", "Formula", "lmtest", "modeltools", "sandwich"] + "version": "3.2-0", + "sha256": "1r5k0y6lyrygbwzjf5y882rdwf1dr17cppj1vy8fiyysn6zrxd0h", + "depends": ["Formula", "flexmix", "lmtest", "modeltools", "sandwich"] }, "betategarch": { "name": "betategarch", @@ -42527,7 +42947,7 @@ "name": "beyondWhittle", "version": "1.2.1", "sha256": "0lh496w6hsdcdkn51zlnm5vw0wx1a6d60h24zqzmsl1zr4y6667z", - "depends": ["BH", "forecast", "ltsa", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "forecast", "ltsa"] }, "bezier": { "name": "bezier", @@ -42539,7 +42959,7 @@ "name": "bfast", "version": "1.6.1", "sha256": "1vjklk7d9b0q7j348aqvspm7rn80bh06hz66r2z1qs9436ppkx5a", - "depends": ["forecast", "Rcpp", "Rdpack", "strucchangeRcpp", "zoo"] + "depends": ["Rcpp", "Rdpack", "forecast", "strucchangeRcpp", "zoo"] }, "bfp": { "name": "bfp", @@ -42563,7 +42983,7 @@ "name": "bfw", "version": "0.4.2", "sha256": "0qgq47axa0r9653d1sjm00fvfx49v28id5sngwyrgkppcngmbg9p", - "depends": ["circlize", "coda", "data_table", "dplyr", "ggplot2", "magrittr", "MASS", "officer", "plyr", "png", "runjags", "rvg", "scales"] + "depends": ["MASS", "circlize", "coda", "data_table", "dplyr", "ggplot2", "magrittr", "officer", "plyr", "png", "runjags", "rvg", "scales"] }, "bgev": { "name": "bgev", @@ -42581,7 +43001,7 @@ "name": "bggAnalytics", "version": "0.2.1", "sha256": "0c761f04vr63zsavj3vzxxab30zn4p5zpi5gyfkqplm96brpkg3m", - "depends": ["checkmate", "data_table", "pryr", "R6", "stringr", "xml2"] + "depends": ["R6", "checkmate", "data_table", "pryr", "stringr", "xml2"] }, "bggum": { "name": "bggum", @@ -42611,13 +43031,13 @@ "name": "bgsmtr", "version": "0.7", "sha256": "17706qims9637ppwg0vszkcm6kmvhzyrdihkgigpiv5lknhk2q3m", - "depends": ["CholWishart", "coda", "EDISON", "glmnet", "inline", "LaplacesDemon", "Matrix", "matrixcalc", "miscTools", "mnormt", "mvtnorm", "Rcpp", "sparseMVN", "statmod"] + "depends": ["CholWishart", "EDISON", "LaplacesDemon", "Matrix", "Rcpp", "coda", "glmnet", "inline", "matrixcalc", "miscTools", "mnormt", "mvtnorm", "sparseMVN", "statmod"] }, "bgumbel": { "name": "bgumbel", "version": "0.0.3", "sha256": "18k8dy44x49hr4s37hjrq60c3cbw0slc9gjmd8gwcbz4slix2ydk", - "depends": ["coda", "MASS", "MCMCpack", "quantreg", "SparseM"] + "depends": ["MASS", "MCMCpack", "SparseM", "coda", "quantreg"] }, "bgw": { "name": "bgw", @@ -42629,13 +43049,13 @@ "name": "bhm", "version": "1.18", "sha256": "05gr5qmd6dzfylay60wazi0iyvj9r0xhzdk7jm7wrsrag7i43z1p", - "depends": ["coda", "ggplot2", "MASS", "survival"] + "depends": ["MASS", "coda", "ggplot2", "survival"] }, "bhmbasket": { "name": "bhmbasket", "version": "0.9.5", "sha256": "1mcgbvlnrmxlxqcjmc7ij7qn3zqfwsmbx2r2facbqrf043hmiipc", - "depends": ["doRNG", "foreach", "R2jags"] + "depends": ["R2jags", "doRNG", "foreach"] }, "bhpm": { "name": "bhpm", @@ -42647,7 +43067,7 @@ "name": "biClassify", "version": "1.3", "sha256": "14z3kmpmlvnkjwpjspajdfx5951cmck4binszzdd7nqbai5f1dwv", - "depends": ["DAAG", "expm", "fields", "MASS", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["DAAG", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "expm", "fields", "mvtnorm"] }, "bib2df": { "name": "bib2df", @@ -42663,9 +43083,9 @@ }, "bibliometrix": { "name": "bibliometrix", - "version": "4.2.3", - "sha256": "0amlqzc3ngh4r0gzk4y110kjl79gd4h5b4i6bid19v8q5qi3g3gm", - "depends": ["bibliometrixData", "ca", "dimensionsR", "dplyr", "DT", "forcats", "ggplot2", "ggrepel", "igraph", "Matrix", "openalexR", "openxlsx", "plotly", "pubmedR", "readr", "readxl", "rscopus", "shiny", "SnowballC", "stringdist", "stringi", "tidyr", "tidytext"] + "version": "4.3.0", + "sha256": "1cas914ach2d2r8pjybyx2lvhydlsx89y2bgkqn40vhg8d40zc5d", + "depends": ["DT", "Matrix", "SnowballC", "bibliometrixData", "ca", "dimensionsR", "dplyr", "forcats", "ggplot2", "ggrepel", "igraph", "openalexR", "openxlsx", "plotly", "pubmedR", "readr", "readxl", "rscopus", "shiny", "stringdist", "stringi", "tidyr", "tidytext"] }, "bibliometrixData": { "name": "bibliometrixData", @@ -42677,7 +43097,7 @@ "name": "biblionetwork", "version": "0.1.0", "sha256": "0nhx9bk7r5l0bvj98clnmwf53ihghf48zai4nj6pcgr2rb69fvjj", - "depends": ["data_table", "Rdpack"] + "depends": ["Rdpack", "data_table"] }, "bibliorefer": { "name": "bibliorefer", @@ -42689,7 +43109,7 @@ "name": "biblioverlap", "version": "1.0.2", "sha256": "03mpw4h7z33dnmf7ain085xnlb6wjzj8vsrlr2jhm0h6fpx9880y", - "depends": ["dplyr", "ggplot2", "ggVennDiagram", "magrittr", "Matrix", "rlang", "shiny", "stringdist", "UpSetR", "uuid"] + "depends": ["Matrix", "UpSetR", "dplyr", "ggVennDiagram", "ggplot2", "magrittr", "rlang", "shiny", "stringdist", "uuid"] }, "bibs": { "name": "bibs", @@ -42707,7 +43127,7 @@ "name": "biclust", "version": "2.0.3.1", "sha256": "11fcb6z5lzz6yl8hsa8ppr53i8yn8k4m19k55ynznhkw780184c7", - "depends": ["additivityTests", "colorspace", "flexclust", "ggplot2", "lattice", "MASS", "tidyr"] + "depends": ["MASS", "additivityTests", "colorspace", "flexclust", "ggplot2", "lattice", "tidyr"] }, "biclustermd": { "name": "biclustermd", @@ -42717,15 +43137,15 @@ }, "bidask": { "name": "bidask", - "version": "2.0.4", - "sha256": "1sdzn2src3m4w6mjn9v67qyn0g0pzmgbkwqqphnq7pwwy94qd6i3", + "version": "2.0.6", + "sha256": "1kavjvllp1vf01xj9mnngd6k1r5zx48zp5kvsv5c8qsa53l5gzxl", "depends": ["xts", "zoo"] }, "bife": { "name": "bife", "version": "0.7.2", "sha256": "0xikxniwzcv6jc64rgx39hddqchxk6c43h45algssbz2vaxvc4zg", - "depends": ["data_table", "Formula", "Rcpp", "RcppArmadillo"] + "depends": ["Formula", "Rcpp", "RcppArmadillo", "data_table"] }, "bifurcatingr": { "name": "bifurcatingr", @@ -42735,9 +43155,9 @@ }, "bigBits": { "name": "bigBits", - "version": "1.2", - "sha256": "0qrbm4d3rihy7dvc3lvailmarq1n2hs7qv6wqrgjd0pxnz62j7p7", - "depends": ["gmp", "Rmpfr"] + "version": "1.3", + "sha256": "1aajx0cg3ljjmvc50qx3v2halqksj54i2krcm7ib33cnqaxzbfbb", + "depends": ["Rmpfr", "gmp"] }, "bigD": { "name": "bigD", @@ -42749,7 +43169,7 @@ "name": "bigDM", "version": "0.5.4", "sha256": "0m1q8b4d20iqamypmalh66gkp0rba8ir2m48k5y9j05wfmshkqc4", - "depends": ["crayon", "doParallel", "fastDummies", "foreach", "future", "future_apply", "geos", "MASS", "Matrix", "RColorBrewer", "Rdpack", "rlist", "sf", "spatialreg", "spdep"] + "depends": ["MASS", "Matrix", "RColorBrewer", "Rdpack", "crayon", "doParallel", "fastDummies", "foreach", "future", "future_apply", "geos", "rlist", "sf", "spatialreg", "spdep"] }, "bigGP": { "name": "bigGP", @@ -42761,13 +43181,13 @@ "name": "bigMap", "version": "2.3.1", "sha256": "08c9s5sk672j70d6pnva7z52i4s3knkby06lva9al9n8a3jiwsvz", - "depends": ["BH", "bigmemory", "colorspace", "RColorBrewer", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "RColorBrewer", "Rcpp", "RcppArmadillo", "bigmemory", "colorspace"] }, "bigQF": { "name": "bigQF", "version": "1.6", "sha256": "01qr1cw5v330kkddmgwk4fdlm6msnqcbx1kfzw390yfwq5pr84sy", - "depends": ["CompQuadForm", "coxme", "Matrix", "svd"] + "depends": ["CompQuadForm", "Matrix", "coxme", "svd"] }, "bigReg": { "name": "bigReg", @@ -42779,19 +43199,19 @@ "name": "bigSurvSGD", "version": "0.0.1", "sha256": "08i6hwfr4rpvmxfa0vx8bi2dsa63iasj049ndwfn6zgvai6qaz0s", - "depends": ["bigmemory", "doParallel", "foreach", "Rcpp", "survival"] + "depends": ["Rcpp", "bigmemory", "doParallel", "foreach", "survival"] }, "bigalgebra": { "name": "bigalgebra", "version": "1.1.1", "sha256": "07xzgddnqxn8l41p79qqsvvg4rj03qdqlr3jhfpnra6c82wlhspw", - "depends": ["BH", "bigmemory", "Rcpp"] + "depends": ["BH", "Rcpp", "bigmemory"] }, "biganalytics": { "name": "biganalytics", "version": "1.1.22", "sha256": "0y9zr4gr31l4q2j78nqyh4svlgsd7f5x8jkhgsflfr6agia77gyh", - "depends": ["BH", "biglm", "bigmemory", "foreach", "Rcpp"] + "depends": ["BH", "Rcpp", "biglm", "bigmemory", "foreach"] }, "bigassertr": { "name": "bigassertr", @@ -42815,13 +43235,13 @@ "name": "bigergm", "version": "1.2.1", "sha256": "0x8y7aijidpka117zjc80yvjlxv8cdiwxhqzy0mw33halavm10k8", - "depends": ["cachem", "dplyr", "ergm", "ergm_multi", "foreach", "glue", "igraph", "intergraph", "magrittr", "Matrix", "memoise", "network", "purrr", "Rcpp", "RcppArmadillo", "readr", "reticulate", "rlang", "statnet_common", "stringr", "tidyr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "cachem", "dplyr", "ergm", "ergm_multi", "foreach", "glue", "igraph", "intergraph", "magrittr", "memoise", "network", "purrr", "readr", "reticulate", "rlang", "statnet_common", "stringr", "tidyr"] }, "biglasso": { "name": "biglasso", "version": "1.6.0", "sha256": "165bc1y5byma872yld5y5nxkhyhkfn6h4gfiqv5bkfw5hn77ijlc", - "depends": ["BH", "bigmemory", "Matrix", "ncvreg", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Matrix", "Rcpp", "RcppArmadillo", "bigmemory", "ncvreg"] }, "bigleaf": { "name": "bigleaf", @@ -42851,7 +43271,7 @@ "name": "bigmemory", "version": "4.6.4", "sha256": "0b80c2nsgphgr3cnvf75a0z3bzqx4q1a4dplq0h2izc71mn5fgzy", - "depends": ["BH", "bigmemory_sri", "Rcpp", "uuid"] + "depends": ["BH", "Rcpp", "bigmemory_sri", "uuid"] }, "bigmemory_sri": { "name": "bigmemory.sri", @@ -42869,25 +43289,25 @@ "name": "bigparallelr", "version": "0.3.2", "sha256": "14rkcig4j93c231sfm43331ykmvxjx2fiz5nhblj2rfzkxli4css", - "depends": ["bigassertr", "doParallel", "flock", "foreach", "parallelly", "RhpcBLASctl"] + "depends": ["RhpcBLASctl", "bigassertr", "doParallel", "flock", "foreach", "parallelly"] }, "bigreadr": { "name": "bigreadr", "version": "0.2.5", "sha256": "15wy5rphk2l59k8fk68a15xsvy8nxj1srnc2c86i7y5ym04a856k", - "depends": ["bigassertr", "data_table", "parallelly", "Rcpp"] + "depends": ["Rcpp", "bigassertr", "data_table", "parallelly"] }, "bigrquery": { "name": "bigrquery", "version": "1.5.1", "sha256": "0wkm9xka83skq1cnv830q4jnqvwm8rlmns2mj8n692h2y5qxlmna", - "depends": ["bit64", "brio", "cli", "clock", "cpp11", "curl", "DBI", "gargle", "httr", "jsonlite", "lifecycle", "prettyunits", "rapidjsonr", "rlang", "tibble"] + "depends": ["DBI", "bit64", "brio", "cli", "clock", "cpp11", "curl", "gargle", "httr", "jsonlite", "lifecycle", "prettyunits", "rapidjsonr", "rlang", "tibble"] }, "bigrquerystorage": { "name": "bigrquerystorage", "version": "1.1.0", "sha256": "1idhaf6i7sbrdmzzc0ks76yr47lpl63lcjprsnjzwkyc124nx606", - "depends": ["arrow", "assertthat", "bigrquery", "bit64", "DBI", "lifecycle", "Rcpp", "rlang", "tibble"] + "depends": ["DBI", "Rcpp", "arrow", "assertthat", "bigrquery", "bit64", "lifecycle", "rlang", "tibble"] }, "bigsimr": { "name": "bigsimr", @@ -42899,13 +43319,13 @@ "name": "bigsnpr", "version": "1.12.2", "sha256": "1xl7456xnid6pvvcppm4297vmgln7f4n15ziz0yfp5i5mqlmafj4", - "depends": ["bigassertr", "bigparallelr", "bigreadr", "bigsparser", "bigstatsr", "bigutilsr", "data_table", "doRNG", "foreach", "ggplot2", "magrittr", "Matrix", "Rcpp", "RcppArmadillo", "rmio", "roptim", "runonce", "vctrs"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "bigassertr", "bigparallelr", "bigreadr", "bigsparser", "bigstatsr", "bigutilsr", "data_table", "doRNG", "foreach", "ggplot2", "magrittr", "rmio", "roptim", "runonce", "vctrs"] }, "bigsparser": { "name": "bigsparser", "version": "0.7.1", "sha256": "0ppmv09n5ypm8jhsd580flk4k6p255k7az9k96fzjwjfrn0vmm74", - "depends": ["bigassertr", "Matrix", "Rcpp", "RcppEigen", "rmio"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "bigassertr", "rmio"] }, "bigsplines": { "name": "bigsplines", @@ -42917,19 +43337,19 @@ "name": "bigstatsr", "version": "1.5.12", "sha256": "1wj169j91yjlb12dzy80q7rvi102l7fhlzfvc93rxifq2w3px9x8", - "depends": ["bigassertr", "bigparallelr", "cowplot", "foreach", "ggplot2", "ps", "Rcpp", "RcppArmadillo", "rmio", "RSpectra", "tibble"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "bigassertr", "bigparallelr", "cowplot", "foreach", "ggplot2", "ps", "rmio", "tibble"] }, "bigstep": { "name": "bigstep", "version": "1.1.1", "sha256": "1bppvib57p6m91c2v9w9lgb1k3jg8mk3w2kkbjvwgsdwy4m8fhap", - "depends": ["bigmemory", "magrittr", "matrixStats", "R_utils", "RcppEigen", "speedglm"] + "depends": ["R_utils", "RcppEigen", "bigmemory", "magrittr", "matrixStats", "speedglm"] }, "bigtabulate": { "name": "bigtabulate", "version": "1.1.9", "sha256": "0ws73fasmwsjbv5l63iln164ai7n3dy6wwpm8vqkpys7wl1i3xxy", - "depends": ["BH", "biganalytics", "bigmemory", "Rcpp"] + "depends": ["BH", "Rcpp", "biganalytics", "bigmemory"] }, "bigtcr": { "name": "bigtcr", @@ -42941,13 +43361,13 @@ "name": "bigtime", "version": "0.2.3", "sha256": "1lnq8zjhvnm5q90y2aak11l8a726p1w4wgjwdvdn9pzlwgm8xia5", - "depends": ["corrplot", "dplyr", "ggplot2", "magrittr", "Rcpp", "RcppArmadillo", "RcppEigen", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "corrplot", "dplyr", "ggplot2", "magrittr", "tidyr"] }, "bigutilsr": { "name": "bigutilsr", "version": "0.3.4", "sha256": "096h0v277n39bvipfbfd730lz3qkplfnv58zmzsyy3al9f7lajxl", - "depends": ["bigassertr", "bigparallelr", "nabor", "Rcpp", "robustbase", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "bigassertr", "bigparallelr", "nabor", "robustbase"] }, "bikeshare14": { "name": "bikeshare14", @@ -42981,21 +43401,21 @@ }, "bimets": { "name": "bimets", - "version": "3.0.2", - "sha256": "0cnpx2c2ik9ih5hvgl91abn9xpq1xdvv2dfxsiz77dmhwk9xrpv9", + "version": "4.0.2", + "sha256": "155radkxpjqkpdyg52qck8yiffp29nk1bplalwqkvy50lz97wrai", "depends": ["xts", "zoo"] }, "binGroup": { "name": "binGroup", "version": "2.2-1", "sha256": "0cb7j6b0s3y56mv1967awwri0kv0rf3sr3vwf9gc2zbjggxi9ffp", - "depends": ["partitions", "Rdpack"] + "depends": ["Rdpack", "partitions"] }, "binGroup2": { "name": "binGroup2", "version": "1.3.1", "sha256": "000a8vci2sfxgbw412i0wajmnwgpx54zalcv4xhvyckh69i1z1db", - "depends": ["ggplot2", "partitions", "rBeta2009", "Rcpp", "RcppArmadillo", "Rdpack", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "ggplot2", "partitions", "rBeta2009", "scales"] }, "binMto": { "name": "binMto", @@ -43013,19 +43433,19 @@ "name": "binaryGP", "version": "0.2", "sha256": "0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6", - "depends": ["GPfit", "lhs", "logitnorm", "nloptr", "Rcpp", "RcppArmadillo"] + "depends": ["GPfit", "Rcpp", "RcppArmadillo", "lhs", "logitnorm", "nloptr"] }, "binaryMM": { "name": "binaryMM", "version": "0.1.1", "sha256": "0vjs3in8rih5iinlfcrilpqwqjxkdf01h6giv993zy8l3s28r9yd", - "depends": ["fastGHQuad", "MASS", "Rcpp"] + "depends": ["MASS", "Rcpp", "fastGHQuad"] }, "binb": { "name": "binb", - "version": "0.0.6", - "sha256": "0j9iyawkn1mqvf52q1abp0k00r5239rkvvmvl3cmp4jlffxd4xd7", - "depends": ["knitr", "rmarkdown"] + "version": "0.0.7", + "sha256": "18f4l7fa3b0h1r91xy9nvplllgnsx3r765qibbbz1rz5zq6cnjpg", + "depends": ["codetools", "knitr", "rmarkdown"] }, "binda": { "name": "binda", @@ -43049,7 +43469,7 @@ "name": "bindrcpp", "version": "0.2.3", "sha256": "1yn9is89r76ay314s216whr0igych4r78kjz85amhwgfb9wawbb6", - "depends": ["bindr", "plogr", "Rcpp"] + "depends": ["Rcpp", "bindr", "plogr"] }, "binequality": { "name": "binequality", @@ -43085,7 +43505,7 @@ "name": "binhf", "version": "1.0-3", "sha256": "1vdw2s8zddp7gad8l3c4jpmnjcc0f5wpqbrp6gp9lgp1c3qa505y", - "depends": ["adlift", "EbayesThresh", "wavethresh"] + "depends": ["EbayesThresh", "adlift", "wavethresh"] }, "binman": { "name": "binman", @@ -43139,7 +43559,7 @@ "name": "binsegRcpp", "version": "2023.8.31", "sha256": "1rx8rxgzjf4bjbx6gpf70pnma05g51lg6l1z0kdswj8m3pmqnk93", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "binseqtest": { "name": "binseqtest", @@ -43157,12 +43577,12 @@ "name": "binspp", "version": "0.1.26", "sha256": "0ah002lvimniwmwgn2syw9saxgzpdhs5vins0f3kb98p5k3gdxqk", - "depends": ["cluster", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppEigen", "spatstat", "spatstat_geom", "spatstat_model", "spatstat_random", "VGAM"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "VGAM", "cluster", "mvtnorm", "spatstat", "spatstat_geom", "spatstat_model", "spatstat_random"] }, "binsreg": { "name": "binsreg", - "version": "1.0", - "sha256": "1lsfh45psa85vxr8ll2297syjszfasgay946n7pzfw1nizfc29b9", + "version": "1.1", + "sha256": "04afp5sixn51kf519sgrra50knmkz1a1gsz28xbdjph9vx5bv6jl", "depends": ["ggplot2", "matrixStats", "quantreg", "sandwich"] }, "binst": { @@ -43197,9 +43617,9 @@ }, "bioRad": { "name": "bioRad", - "version": "0.7.3", - "sha256": "0gschmraqc76yiqdn48cg1qnd0p7b6x7h2gr54a84pb4ivbn6vyy", - "depends": ["assertthat", "curl", "dplyr", "fields", "frictionless", "ggplot2", "glue", "jsonlite", "lubridate", "lutz", "raster", "readr", "rhdf5", "rlang", "sp", "suntools", "tidyr", "viridis", "viridisLite"] + "version": "0.8.1", + "sha256": "1c7wl1wk1lh31dr7a7lwbjib4v1mfvvyi8iwfc9svj07y4wpzj58", + "depends": ["assertthat", "curl", "dplyr", "fields", "ggplot2", "glue", "jsonlite", "lubridate", "lutz", "raster", "readr", "rhdf5", "rlang", "sf", "sp", "stringr", "suntools", "tidyr", "tidyselect", "viridis", "viridisLite"] }, "bioSNR": { "name": "bioSNR", @@ -43211,7 +43631,7 @@ "name": "bioacoustics", "version": "0.2.8", "sha256": "08qhxx7xgswjamrgg82pkg1f7w50dx9ln67d50n1p3rvrxab4061", - "depends": ["htmltools", "moments", "Rcpp", "stringr", "tuneR"] + "depends": ["Rcpp", "htmltools", "moments", "stringr", "tuneR"] }, "biobricks": { "name": "biobricks", @@ -43235,7 +43655,7 @@ "name": "biodosetools", "version": "3.6.1", "sha256": "013nqdqrv5h3swzqss2kazsp06wrs57zri3aaidy92wrd6v24bsh", - "depends": ["bsplus", "cli", "config", "dplyr", "ggplot2", "golem", "magrittr", "MASS", "maxLik", "mixtools", "msm", "rhandsontable", "rlang", "rmarkdown", "shiny", "shinydashboard", "shinyWidgets", "tidyr"] + "depends": ["MASS", "bsplus", "cli", "config", "dplyr", "ggplot2", "golem", "magrittr", "maxLik", "mixtools", "msm", "rhandsontable", "rlang", "rmarkdown", "shiny", "shinyWidgets", "shinydashboard", "tidyr"] }, "biogas": { "name": "biogas", @@ -43259,7 +43679,7 @@ "name": "biogrowth", "version": "1.0.4", "sha256": "19czyp7n4ip01psl8hbiihfhj52vdp6nsq0h7cnl7p9h0ax9wcj5", - "depends": ["cowplot", "deSolve", "dplyr", "FME", "formula_tools", "ggplot2", "lamW", "lifecycle", "MASS", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["FME", "MASS", "cowplot", "deSolve", "dplyr", "formula_tools", "ggplot2", "lamW", "lifecycle", "purrr", "rlang", "tibble", "tidyr"] }, "bioimagetools": { "name": "bioimagetools", @@ -43271,13 +43691,13 @@ "name": "bioinactivation", "version": "1.2.3", "sha256": "0gz1bbakf6b23jsbvrr8314yxajxcr1akm5srgm883lrf1p5ax13", - "depends": ["deSolve", "dplyr", "FME", "ggplot2", "lazyeval", "MASS", "purrr", "rlang"] + "depends": ["FME", "MASS", "deSolve", "dplyr", "ggplot2", "lazyeval", "purrr", "rlang"] }, "biolink": { "name": "biolink", "version": "0.1.8", "sha256": "03jsvzy6fqbx3w6gs7v1mnznkqwsad3ywdb4wxp0mbaq4vrsandm", - "depends": ["DBI", "glue", "memoise", "rentrez", "RMySQL", "xml2"] + "depends": ["DBI", "RMySQL", "glue", "memoise", "rentrez", "xml2"] }, "biologicalActivityIndices": { "name": "biologicalActivityIndices", @@ -43289,7 +43709,7 @@ "name": "biomartr", "version": "1.0.7", "sha256": "0ic6qbk2xmgrcc0xhxyhjafp1xbf2c5dpbqqrbkprrhynr8mq7cx", - "depends": ["biomaRt", "Biostrings", "curl", "data_table", "downloader", "dplyr", "fs", "httr", "jsonlite", "philentropy", "purrr", "R_utils", "RCurl", "readr", "stringr", "tibble", "withr", "XML"] + "depends": ["Biostrings", "RCurl", "R_utils", "XML", "biomaRt", "curl", "data_table", "downloader", "dplyr", "fs", "httr", "jsonlite", "philentropy", "purrr", "readr", "stringr", "tibble", "withr"] }, "biometryassist": { "name": "biometryassist", @@ -43301,7 +43721,7 @@ "name": "biomod2", "version": "4.2-5-2", "sha256": "1rdlkspi0hkgnrc4qs7vgbmcpsf74nzdq8w0akg59bynp0ks8k0w", - "depends": ["abind", "dplyr", "foreach", "gbm", "ggplot2", "MASS", "PresenceAbsence", "pROC", "reshape", "reshape2", "rpart", "sp", "terra"] + "depends": ["MASS", "PresenceAbsence", "abind", "dplyr", "foreach", "gbm", "ggplot2", "pROC", "reshape", "reshape2", "rpart", "sp", "terra"] }, "bionetdata": { "name": "bionetdata", @@ -43311,15 +43731,15 @@ }, "biopixR": { "name": "biopixR", - "version": "1.0.0", - "sha256": "1ab5sqik4pnkq4f3dhf27z5c74jqrj8r95pwz2rdhaagm5ac8iyy", + "version": "1.1.0", + "sha256": "0avdpg73s9hqkyfgrfmprhcc5hpxf4in6s3221n5gf3pcii8jw0c", "depends": ["cluster", "data_table", "imager", "magick"] }, "bioregion": { "name": "bioregion", "version": "1.1.1", "sha256": "03qjyaw1kiqn9q4wc49rzy6vp83pf5567y07ih4rgp1r3pamnif0", - "depends": ["ape", "bipartite", "cluster", "data_table", "dbscan", "dynamicTreeCut", "fastcluster", "fastkmedoids", "ggplot2", "igraph", "mathjaxr", "Matrix", "Rcpp", "Rdpack", "rlang", "rmarkdown", "segmented", "sf", "tidyr"] + "depends": ["Matrix", "Rcpp", "Rdpack", "ape", "bipartite", "cluster", "data_table", "dbscan", "dynamicTreeCut", "fastcluster", "fastkmedoids", "ggplot2", "igraph", "mathjaxr", "rlang", "rmarkdown", "segmented", "sf", "tidyr"] }, "bios2mds": { "name": "bios2mds", @@ -43337,7 +43757,7 @@ "name": "biosensors.usc", "version": "1.0", "sha256": "076isyk7dfjpi5db7ghk0hmz2kkdgmrnj3g9ffdnim5gxq3zsf1h", - "depends": ["energy", "fda_usc", "osqp", "parallelDist", "Rcpp", "RcppArmadillo", "truncnorm"] + "depends": ["Rcpp", "RcppArmadillo", "energy", "fda_usc", "osqp", "parallelDist", "truncnorm"] }, "bioseq": { "name": "bioseq", @@ -43355,7 +43775,7 @@ "name": "biospear", "version": "1.0.2", "sha256": "10y4hbncwiqpxzqvzjrmfgp804zczdgvwpjcj0dzaa0sx1njdzja", - "depends": ["cobs", "corpcor", "devtools", "glmnet", "grplasso", "MASS", "Matrix", "mboost", "pkgconfig", "plsRcox", "pROC", "PRROC", "RCurl", "survAUC", "survival"] + "depends": ["MASS", "Matrix", "PRROC", "RCurl", "cobs", "corpcor", "devtools", "glmnet", "grplasso", "mboost", "pROC", "pkgconfig", "plsRcox", "survAUC", "survival"] }, "biostat3": { "name": "biostat3", @@ -43373,19 +43793,19 @@ "name": "biotools", "version": "4.2", "sha256": "1dyy9mk2afjbc8g1qygy6h1aksbhndm53c4sb5mfzriydl03ibxv", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "bipartite": { "name": "bipartite", "version": "2.20", "sha256": "0wgx695r5knlrzg0wv5h2sivh3xzjsb50lafmb08j1fvg3hnrxl6", - "depends": ["fields", "igraph", "MASS", "permute", "sna", "vegan"] + "depends": ["MASS", "fields", "igraph", "permute", "sna", "vegan"] }, "bipartiteD3": { "name": "bipartiteD3", "version": "0.3.1", "sha256": "0w2bnlaga8nxdidrhgz34hqbxb5882jbz31a7g4n283gbz5w1b9g", - "depends": ["downloader", "dplyr", "purrr", "r2d3", "RColorBrewer", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "downloader", "dplyr", "purrr", "r2d3", "stringr", "tibble", "tidyr"] }, "bipd": { "name": "bipd", @@ -43401,27 +43821,27 @@ }, "biplotEZ": { "name": "biplotEZ", - "version": "1.2.0", - "sha256": "0fhafa00x1vj8lvhjm10daw8an62jsycsiq31skm547ig09fccym", - "depends": ["ggplot2", "ggrepel", "withr"] + "version": "2.0", + "sha256": "0wdsxipgfjdfa09zilqzzhpa36wg48z4alf3p7a8vgg9458igblb", + "depends": ["plotrix", "withr"] }, "biplotbootGUI": { "name": "biplotbootGUI", "version": "1.3", "sha256": "1z2mlfya6c4lh970p6hpf8sqhxz7wjl16d1lx2djv4cr8sj7nhdh", - "depends": ["cluster", "dendroextras", "MASS", "matlib", "rgl", "shapes", "tcltk2", "tkrplot"] + "depends": ["MASS", "cluster", "dendroextras", "matlib", "rgl", "shapes", "tcltk2", "tkrplot"] }, "birankr": { "name": "birankr", "version": "1.0.1", "sha256": "1azgrzgw5bnfac8p287ir5zl6kxc6jij20p6cfc3lbbl03f8sa1k", - "depends": ["data_table", "Matrix"] + "depends": ["Matrix", "data_table"] }, "birdie": { "name": "birdie", "version": "0.6.1", "sha256": "1xh3ga5f16p46jrw7xj2mwv41mnib0mijin2005q9wrfr5pr54yc", - "depends": ["BH", "cli", "dplyr", "generics", "Rcpp", "RcppEigen", "RcppParallel", "RcppThread", "rlang", "SQUAREM", "StanHeaders", "stringi", "stringr", "vctrs"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "RcppThread", "SQUAREM", "StanHeaders", "cli", "dplyr", "generics", "rlang", "stringi", "stringr", "vctrs"] }, "birdring": { "name": "birdring", @@ -43431,9 +43851,9 @@ }, "birdscanR": { "name": "birdscanR", - "version": "0.2.0", - "sha256": "0vbvf9512214sgah3jsn7cdy8abkyr9pvaqaivqjrhyfpv9fvbr1", - "depends": ["DBI", "dplyr", "ggplot2", "magrittr", "modi", "reshape2", "RODBC", "RPostgreSQL", "rstudioapi", "sp", "suntools", "tibble", "tidyr"] + "version": "0.3.0", + "sha256": "1brgz6x8ljgy9y87znx93d6d68vsr7a75i1p86rxnxvka0s91r15", + "depends": ["DBI", "RODBC", "RPostgreSQL", "dplyr", "ggplot2", "magrittr", "modi", "reshape2", "rlang", "rstudioapi", "sp", "suntools", "tibble", "tidyr"] }, "birk": { "name": "birk", @@ -43463,19 +43883,19 @@ "name": "bispdep", "version": "1.0-0", "sha256": "18rbzfp5ql0qhglmibzvdj1lbq48cvkzz4rpjgam43xkknhyivra", - "depends": ["boot", "combinat", "ggplot2", "RColorBrewer", "sf", "sp", "spatialreg", "spData", "spdep"] + "depends": ["RColorBrewer", "boot", "combinat", "ggplot2", "sf", "sp", "spData", "spatialreg", "spdep"] }, "bisque": { "name": "bisque", "version": "1.0.2", "sha256": "0zp2r1vg29q2ds34hhyjv9pz761mi0qncx9p4ilwnfd5yj9pmzwq", - "depends": ["foreach", "itertools", "mvQuad", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "foreach", "itertools", "mvQuad"] }, "bistablehistory": { "name": "bistablehistory", "version": "1.1.2", "sha256": "114m7banr0h4l7lzq2bsjz9l3qb7xgg297ix9aj62rmz02p7x5hf", - "depends": ["BH", "boot", "dplyr", "future", "glue", "loo", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "boot", "dplyr", "future", "glue", "loo", "purrr", "rlang", "rstan", "rstantools", "tibble", "tidyr"] }, "bit": { "name": "bit", @@ -43493,7 +43913,7 @@ "name": "bite", "version": "0.3", "sha256": "00sph3pdbb9p21s3263ni4by2ivvya1sbjm9wvwx1rwjr4f31jps", - "depends": ["ape", "coda", "MASS", "phytools", "sm", "vioplot", "xml2"] + "depends": ["MASS", "ape", "coda", "phytools", "sm", "vioplot", "xml2"] }, "bitmexr": { "name": "bitmexr", @@ -43503,15 +43923,15 @@ }, "bitops": { "name": "bitops", - "version": "1.0-7", - "sha256": "1i0phmq5yynla5x0frqll1gbf5ww59p3sgz1s06a354zqf9grdg9", + "version": "1.0-8", + "sha256": "0f1744pi3qb1av41man6xp2xalwcjslz3qbk35gccpb4d6glp8bq", "depends": [] }, "bittermelon": { "name": "bittermelon", - "version": "1.1.2", - "sha256": "0v1i7pmblin55vz94i68fwih9djp40wqqyibl361dwyz345j3in5", - "depends": ["findpython", "png", "rappdirs", "Unicode"] + "version": "2.0.2", + "sha256": "0nd0jn28rfkqzvji54i4b53qjzl4xjbwnhsw55vyb3209hk84q1w", + "depends": ["Unicode", "cli", "png"] }, "bivariatemaps": { "name": "bivariatemaps", @@ -43539,9 +43959,9 @@ }, "biwavelet": { "name": "biwavelet", - "version": "0.20.21", - "sha256": "0v7arwmng2i22svj836i57q8by9x5pghjv7d35g7r35wakrm8jyx", - "depends": ["fields", "foreach", "Rcpp"] + "version": "0.20.22", + "sha256": "0j9y81rg9rmri39fjvy9s0wckxcdylbwm1ak62rxy65p397ppgcr", + "depends": ["Rcpp", "fields", "foreach"] }, "biwt": { "name": "biwt", @@ -43565,7 +43985,7 @@ "name": "bkmr", "version": "0.2.2", "sha256": "1bzr39a53p1xkq2fi2fphv2rpsml2z25xb1ycs63p3y7qis9zlky", - "depends": ["dplyr", "fields", "magrittr", "MASS", "nlme", "tibble", "tidyr", "tmvtnorm", "truncnorm"] + "depends": ["MASS", "dplyr", "fields", "magrittr", "nlme", "tibble", "tidyr", "tmvtnorm", "truncnorm"] }, "bkmrhat": { "name": "bkmrhat", @@ -43577,7 +43997,7 @@ "name": "blackbox", "version": "1.1.46", "sha256": "03m93v5nk5zg039axkf02drdj2q165k73xk6waaiyi0b8w0sbl8l", - "depends": ["foreach", "geometry", "lattice", "MASS", "matrixStats", "nloptr", "numDeriv", "pbapply", "proxy", "rcdd", "Rcpp", "RcppEigen", "spaMM"] + "depends": ["MASS", "Rcpp", "RcppEigen", "foreach", "geometry", "lattice", "matrixStats", "nloptr", "numDeriv", "pbapply", "proxy", "rcdd", "spaMM"] }, "blackmarbler": { "name": "blackmarbler", @@ -43601,7 +44021,7 @@ "name": "blapsr", "version": "0.6.1", "sha256": "1vycwglrpb0d041xj3dza25am16ac80r93si8x45b5ry0aq38c46", - "depends": ["coda", "MASS", "Matrix", "RSpectra", "sn", "survival"] + "depends": ["MASS", "Matrix", "RSpectra", "coda", "sn", "survival"] }, "blaster": { "name": "blaster", @@ -43619,13 +44039,13 @@ "name": "blatent", "version": "0.1.2", "sha256": "0vmybbb5xwmlmzgzyaxiiargi4fd2f661sap2wfmjw9rav89zhmv", - "depends": ["coda", "Matrix", "mnormt", "R6", "Rcpp", "RcppArmadillo", "truncnorm"] + "depends": ["Matrix", "R6", "Rcpp", "RcppArmadillo", "coda", "mnormt", "truncnorm"] }, "blavaan": { "name": "blavaan", "version": "0.5-5", "sha256": "0v8b6dax5wk3y3hnih0yfsg7cvdwqv9pxs2hd54yi8hmkmgbrlx8", - "depends": ["bayesplot", "BH", "coda", "future_apply", "lavaan", "loo", "Matrix", "mnormt", "nonnest2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tmvnsim"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "coda", "future_apply", "lavaan", "loo", "mnormt", "nonnest2", "rstan", "rstantools", "tmvnsim"] }, "blender": { "name": "blender", @@ -43653,9 +44073,9 @@ }, "bliss": { "name": "bliss", - "version": "1.1.0", - "sha256": "0s5xbk78ygyk8nc3b2279hr3cp4f0nk7nr0cam4n5h5s77cxi3fw", - "depends": ["ggplot2", "MASS", "Rcpp", "RcppArmadillo", "RcppProgress"] + "version": "1.1.1", + "sha256": "0ayqzkwq897nx02clw1qb413m1a6bzfdgxw8vmmpbqld8y6ajyk9", + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppProgress", "ggplot2"] }, "blm": { "name": "blm", @@ -43673,7 +44093,7 @@ "name": "blmeco", "version": "1.4", "sha256": "1370djpy87816bfr0g8730x7q4d4xx9aa41iqm622q5b5zm2jzmp", - "depends": ["arm", "lme4", "MASS"] + "depends": ["MASS", "arm", "lme4"] }, "blob": { "name": "blob", @@ -43697,7 +44117,7 @@ "name": "blockTools", "version": "0.6.4", "sha256": "0372ca7mgzz6j0gp2yn2mjpj0kq01jg3pyhd33s65srap2n0wg0d", - "depends": ["dplyr", "MASS", "tibble"] + "depends": ["MASS", "dplyr", "tibble"] }, "blockcluster": { "name": "blockcluster", @@ -43727,7 +44147,7 @@ "name": "blockmodels", "version": "1.1.5", "sha256": "1h2g13yp8xhkw9icl5bi1nkc0qfqkqhlhdqbcsp0246g9amssci9", - "depends": ["digest", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "digest"] }, "blockrand": { "name": "blockrand", @@ -43739,7 +44159,7 @@ "name": "blocksdesign", "version": "4.9", "sha256": "1kr3fxs8vgc96clhx5ml11jkwll1rg9gf16xg93q14jpg4hg0j9h", - "depends": ["plyr", "PolynomF"] + "depends": ["PolynomF", "plyr"] }, "blocs": { "name": "blocs", @@ -43757,7 +44177,7 @@ "name": "blorr", "version": "0.3.0", "sha256": "1ynvg6ar7c7p01225q9czy4gxks0p1vw3sx207l7vzqxw20wb1bn", - "depends": ["car", "data_table", "ggplot2", "gridExtra", "lest", "Rcpp"] + "depends": ["Rcpp", "car", "data_table", "ggplot2", "gridExtra", "lest"] }, "blrm": { "name": "blrm", @@ -43769,7 +44189,7 @@ "name": "blsBandit", "version": "0.1", "sha256": "08dppd0qym4lac5glifwaraddics8np522sfw4x8xg00vm335r25", - "depends": ["DBI", "jsonlite", "plotly", "RSQLite", "shiny", "zoo"] + "depends": ["DBI", "RSQLite", "jsonlite", "plotly", "shiny", "zoo"] }, "blsR": { "name": "blsR", @@ -43787,7 +44207,7 @@ "name": "bltm", "version": "0.1.0", "sha256": "1sx4ii65ddvdw45za8j320v1s9d1pz5k2gx979yymhyxi8fmq69z", - "depends": ["mvnfast", "Rfast"] + "depends": ["Rfast", "mvnfast"] }, "bluebike": { "name": "bluebike", @@ -43799,7 +44219,7 @@ "name": "bmabasket", "version": "0.1.2", "sha256": "0w8y992ylyg0cyz1lfqll96fivng13lvxp0mhyb48flfnkg8rcdd", - "depends": ["partitions", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "partitions"] }, "bmass": { "name": "bmass", @@ -43811,13 +44231,13 @@ "name": "bmem", "version": "2.1", "sha256": "0acw1xwswf5yi1a0j8pv996qcma3br0xw7a9w9mh7bx5xavlivvl", - "depends": ["Amelia", "lavaan", "MASS", "sem", "snowfall"] + "depends": ["Amelia", "MASS", "lavaan", "sem", "snowfall"] }, "bmemLavaan": { "name": "bmemLavaan", "version": "0.5", "sha256": "0axwc7y7ncvmpnmdlxjdaw2kfhqklxd0zb7n22m6aw67hkqqqcg5", - "depends": ["Amelia", "lavaan", "MASS", "rsem", "sem", "snowfall"] + "depends": ["Amelia", "MASS", "lavaan", "rsem", "sem", "snowfall"] }, "bmet": { "name": "bmet", @@ -43829,13 +44249,13 @@ "name": "bmgarch", "version": "2.0.0", "sha256": "0a0svnb7wxm9v8mzk0ld28scp51sp4rsgspxccqpkbmj31njc4d0", - "depends": ["BH", "forecast", "ggplot2", "loo", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "forecast", "ggplot2", "loo", "rstan", "rstantools"] }, "bmggum": { "name": "bmggum", "version": "0.1.0", "sha256": "1r0j5gklmknyan68nc3vfn96ck414v75547486ic70v2pdr3xnpf", - "depends": ["BH", "edstan", "ggplot2", "GGUM", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "GGUM", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "edstan", "ggplot2", "loo", "rstan", "rstantools"] }, "bmixture": { "name": "bmixture", @@ -43847,7 +44267,7 @@ "name": "bmlm", "version": "1.3.15", "sha256": "1iig406z8whdjpbvajks2vzp1s1ay1f99r1n6qhs9xyi1z6yff2l", - "depends": ["BH", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "rstan", "rstantools"] }, "bmm": { "name": "bmm", @@ -43865,36 +44285,36 @@ "name": "bmscstan", "version": "1.2.1.0", "sha256": "05w6pz0mwqighhdl36f2ya1b4dw0xdhpfcbq6saw73ag5hvl57i9", - "depends": ["bayesplot", "ggplot2", "LaplacesDemon", "logspline", "loo", "rstan"] + "depends": ["LaplacesDemon", "bayesplot", "ggplot2", "logspline", "loo", "rstan"] }, "bmstdr": { "name": "bmstdr", "version": "0.7.9", "sha256": "0myv2mj5kp97dzvbf4sw63fzjxzpv2d82vxwiqxaqd1pllcgrzz1", - "depends": ["BH", "CARBayes", "CARBayesST", "ggplot2", "ggpubr", "inlabru", "MCMCpack", "mnormt", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rstan", "rstantools", "spBayes", "spTDyn", "spTimer", "StanHeaders"] + "depends": ["BH", "CARBayes", "CARBayesST", "MCMCpack", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "ggplot2", "ggpubr", "inlabru", "mnormt", "rstan", "rstantools", "spBayes", "spTDyn", "spTimer"] }, "bnclassify": { "name": "bnclassify", "version": "0.4.8", "sha256": "0sqyqw3jlzjhsmcblzxcc3nak4z63pvg3paniysnjzyi139fjyam", - "depends": ["assertthat", "BH", "entropy", "matrixStats", "Rcpp", "rpart"] + "depends": ["BH", "Rcpp", "assertthat", "entropy", "matrixStats", "rpart"] }, "bndesr": { "name": "bndesr", "version": "1.0.3", "sha256": "0yx5grnaginmdxdi9philz24qvncr6gva01zrasl098p49dx0zpv", - "depends": ["curl", "dplyr", "janitor", "lubridate", "RCurl", "readr", "readxl", "stringr"] + "depends": ["RCurl", "curl", "dplyr", "janitor", "lubridate", "readr", "readxl", "stringr"] }, "bndovb": { "name": "bndovb", "version": "1.1", "sha256": "16mvkvwnx61jrvraagvxf56pvmf5klm8lnkqq4s5y2z92kd0clgp", - "depends": ["dplyr", "factormodel", "MASS", "nnet", "np", "pracma"] + "depends": ["MASS", "dplyr", "factormodel", "nnet", "np", "pracma"] }, "bnlearn": { "name": "bnlearn", - "version": "4.9.4", - "sha256": "1spf8q1bhxc1mdx5hd8z7yqwlyn15fq3ph3rz1vr5v8z8n4qsgff", + "version": "5.0", + "sha256": "18br08n7dbykdhx8adwvizm9m3r1pin76qqy7v1p42cq44qj11p7", "depends": [] }, "bnma": { @@ -43905,21 +44325,21 @@ }, "bnmonitor": { "name": "bnmonitor", - "version": "0.1.4", - "sha256": "0sbpfgm7yibh84m1zmn7b1ixzc2x1m2nlms7zpxp4c6fkv2c225r", - "depends": ["bnlearn", "dplyr", "ggplot2", "gRain", "gRbase", "purrr", "qgraph", "RColorBrewer", "reshape2", "rlang", "tidyr"] + "version": "0.2.0", + "sha256": "0ygsk817x5m474kk1vfnzkr23gj3cbsj69jxbsbvzwwimmhz0094", + "depends": ["RColorBrewer", "bnlearn", "dplyr", "gRain", "gRbase", "ggplot2", "igraph", "purrr", "qgraph", "reshape2", "rlang", "tidyr"] }, "bnnSurvival": { "name": "bnnSurvival", "version": "0.1.5", "sha256": "1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4", - "depends": ["pec", "prodlim", "Rcpp"] + "depends": ["Rcpp", "pec", "prodlim"] }, "bnpa": { "name": "bnpa", "version": "0.3.0", "sha256": "0qsxk47i7q4d8hbs2xj5k5sf8bqyzhq7rbj4y7w8ljprznlydgl9", - "depends": ["bnlearn", "fastDummies", "lavaan", "Rgraphviz", "semPlot", "xlsx"] + "depends": ["Rgraphviz", "bnlearn", "fastDummies", "lavaan", "semPlot", "xlsx"] }, "bnpsd": { "name": "bnpsd", @@ -43963,6 +44383,12 @@ "sha256": "1hi3x2chs87ba5nh7ka6xjrl5yvwqqcdyj1dg87rpaiipyl8396n", "depends": [] }, + "bodycompref": { + "name": "bodycompref", + "version": "2.0.1", + "sha256": "1nsgn3x2w8ri059iwpj9rhg4abxrk6ryq1lbbrwihrxdq9xqvg4v", + "depends": ["assertthat", "gamlss", "sae"] + }, "boggy": { "name": "boggy", "version": "0.0.1", @@ -43979,19 +44405,19 @@ "name": "boinet", "version": "1.0.0", "sha256": "1i023h1kzf5xk92dp9iyllw2b1lprs0xz2hp23lqq9vx36cpird3", - "depends": ["copula", "Iso", "mfp"] + "depends": ["Iso", "copula", "mfp"] }, "boiwsa": { "name": "boiwsa", "version": "1.1.1", "sha256": "1xyxx6xf9az62zxczybl6iizswq7h4i55v4apll8kh0xh6nqlzr7", - "depends": ["dplyr", "ggplot2", "Hmisc", "lubridate", "rlang", "tidyr"] + "depends": ["Hmisc", "dplyr", "ggplot2", "lubridate", "rlang", "tidyr"] }, "bolasso": { "name": "bolasso", "version": "0.2.0", "sha256": "1fbd39jyxq0zfbybrzzwnyql2w8hf2b9133jj0nl99d1326wr7dh", - "depends": ["future_apply", "gamlr", "ggplot2", "glmnet", "Matrix", "progressr", "Rdpack", "tibble"] + "depends": ["Matrix", "Rdpack", "future_apply", "gamlr", "ggplot2", "glmnet", "progressr", "tibble"] }, "bold": { "name": "bold", @@ -44019,10 +44445,16 @@ }, "bonsai": { "name": "bonsai", - "version": "0.2.1", - "sha256": "048nfgnzsi0zz0nsxl30nsjg63nszy44881s49g9hgs3vng2vmp2", + "version": "0.3.1", + "sha256": "01k4b1d0rl6fry1y5594fca7rsp7i55d0wadm7ibydn9jf1hmsiv", "depends": ["cli", "dials", "dplyr", "glue", "parsnip", "purrr", "rlang", "tibble"] }, + "bonsaiforest": { + "name": "bonsaiforest", + "version": "0.1.0", + "sha256": "1k8k2vnn3cxl1nlkls5w1yvvr1qk28j8gak7m2p85gr6nlxfy4p4", + "depends": ["MASS", "Rcpp", "RcppArmadillo", "brms", "broom", "checkmate", "dplyr", "forcats", "gbm", "ggplot2", "glmnet", "splines2", "survival", "tibble", "tidyr", "tidyselect", "vdiffr"] + }, "boodist": { "name": "boodist", "version": "1.0.0", @@ -44031,15 +44463,21 @@ }, "bookdown": { "name": "bookdown", - "version": "0.39", - "sha256": "1brfv50lq92m7d4d18n92ywhfr28lrbq02naf0bwdsmd0ngasxrm", + "version": "0.40", + "sha256": "0fdciqazvsmc34hqfiqlmldigxn8gw546kkz74mc9dh48w24mpsq", "depends": ["htmltools", "jquerylib", "knitr", "rmarkdown", "tinytex", "xfun", "yaml"] }, + "boomer": { + "name": "boomer", + "version": "0.2.0", + "sha256": "1v3fiif0xrrpvl9m7mbqn3c3nv04r0xxsa0fji6grzk6prqw9zqd", + "depends": ["crayon", "pryr", "rlang", "rstudioapi", "styler", "withr"] + }, "boostingDEA": { "name": "boostingDEA", "version": "0.1.0", "sha256": "0df19q44fsv0hvda4dwq302wsh6vlalwszyh0ir66r5ryrrmhas4", - "depends": ["dplyr", "lpSolveAPI", "MLmetrics", "Rglpk"] + "depends": ["MLmetrics", "Rglpk", "dplyr", "lpSolveAPI"] }, "boostmtree": { "name": "boostmtree", @@ -44069,13 +44507,13 @@ "name": "boot.pval", "version": "0.5", "sha256": "0572n82402i609q0jl6p2ar1gq5jlqqssv28xs3rxsr3nza49dxv", - "depends": ["boot", "car", "flextable", "gt", "lme4", "Rdpack", "rms", "survival"] + "depends": ["Rdpack", "boot", "car", "flextable", "gt", "lme4", "rms", "survival"] }, "bootCT": { "name": "bootCT", "version": "2.1.0", "sha256": "1025n0rxvjsyqwba3y4frjhpfqila70p43pk4p4rf9fhxcs4xg6m", - "depends": ["aod", "ARDL", "dplyr", "dynamac", "gtools", "magrittr", "pracma", "Rcpp", "RcppArmadillo", "stringr", "urca", "usethis", "vars"] + "depends": ["ARDL", "Rcpp", "RcppArmadillo", "aod", "dplyr", "dynamac", "gtools", "magrittr", "pracma", "stringr", "urca", "usethis", "vars"] }, "bootComb": { "name": "bootComb", @@ -44093,7 +44531,7 @@ "name": "bootGOF", "version": "0.1.0", "sha256": "11nn4lc9wdx1z35mfpc3zkk1xr0pvvjyvjzpjlq3z4gm0hmniifz", - "depends": ["checkmate", "R6"] + "depends": ["R6", "checkmate"] }, "bootImpute": { "name": "bootImpute", @@ -44129,25 +44567,25 @@ "name": "bootUR", "version": "1.0.4", "sha256": "19sjh9hwx9hcqyrjx5kc2id1ml1sfd6c37g412vzfgk931bm0lbs", - "depends": ["parallelly", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppThread", "urca"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "RcppThread", "parallelly", "urca"] }, "bootcluster": { "name": "bootcluster", "version": "0.3.2", "sha256": "0wkc9li0hqgns7pz72fby187q81yzrgl62qs8w5llayghf8lhaml", - "depends": ["cluster", "doParallel", "dplyr", "flexclust", "foreach", "fpc", "GGally", "ggplot2", "gridExtra", "igraph", "intergraph", "mclust", "network", "plyr", "sna"] + "depends": ["GGally", "cluster", "doParallel", "dplyr", "flexclust", "foreach", "fpc", "ggplot2", "gridExtra", "igraph", "intergraph", "mclust", "network", "plyr", "sna"] }, "bootf2": { "name": "bootf2", "version": "0.4.1", "sha256": "17wrl678x9mb5pny2vwrr6sdl2hsqr1nbjzsizp2q6l3w5m6s152", - "depends": ["ggplot2", "MASS", "minpack_lm", "readxl"] + "depends": ["MASS", "ggplot2", "minpack_lm", "readxl"] }, "bootnet": { "name": "bootnet", "version": "1.6", "sha256": "0r7ad6ybzr3jm5s2791sv402293wi4wy59n7dv5q5ss1vykpsk6h", - "depends": ["abind", "corpcor", "dplyr", "ggplot2", "gtools", "igraph", "IsingFit", "IsingSampler", "Matrix", "mgm", "mvtnorm", "NetworkToolbox", "networktools", "pbapply", "qgraph", "rlang", "snow", "tibble", "tidyr", "tidyselect"] + "depends": ["IsingFit", "IsingSampler", "Matrix", "NetworkToolbox", "abind", "corpcor", "dplyr", "ggplot2", "gtools", "igraph", "mgm", "mvtnorm", "networktools", "pbapply", "qgraph", "rlang", "snow", "tibble", "tidyr", "tidyselect"] }, "bootruin": { "name": "bootruin", @@ -44189,13 +44627,13 @@ "name": "boral", "version": "2.0.2", "sha256": "1x53g3y283i92624rkp36lwfmz0p8rkkqsndn5h35sapjga6wmy3", - "depends": ["abind", "coda", "corpcor", "fishMod", "lifecycle", "MASS", "mvtnorm", "R2jags", "reshape2"] + "depends": ["MASS", "R2jags", "abind", "coda", "corpcor", "fishMod", "lifecycle", "mvtnorm", "reshape2"] }, "borrowr": { "name": "borrowr", "version": "0.2.0", "sha256": "0hq9rplb22dm8nikapxnvzq10y4xzi1y7k61ghw9x1fq4fdfyy2f", - "depends": ["BART", "mvtnorm", "Rcpp"] + "depends": ["BART", "Rcpp", "mvtnorm"] }, "bossR": { "name": "bossR", @@ -44235,9 +44673,9 @@ }, "box_linters": { "name": "box.linters", - "version": "0.9.1", - "sha256": "1v0czkz09gp58ap7n847pcwqsd1n11i44wz6cppnlxhl1wcw8vzn", - "depends": ["cli", "fs", "glue", "lintr", "rlang", "stringr", "xml2", "xmlparsedata"] + "version": "0.10.0", + "sha256": "0m31r5bs49bw9660hsxsmnk131hf6vrzqxank39hvlnid70z9l18", + "depends": ["cli", "fs", "glue", "lintr", "purrr", "rlang", "stringr", "treesitter", "treesitter_r", "withr", "xfun", "xml2", "xmlparsedata"] }, "boxcoxmix": { "name": "boxcoxmix", @@ -44255,7 +44693,7 @@ "name": "boxly", "version": "0.1.1", "sha256": "0fvk95f2nn06aaxn2qq7jxr2yvsnc40806xkamryhrnmrwiphia9", - "depends": ["brew", "crosstalk", "DT", "ggplot2", "htmltools", "htmlwidgets", "metalite", "plotly", "rlang", "uuid"] + "depends": ["DT", "brew", "crosstalk", "ggplot2", "htmltools", "htmlwidgets", "metalite", "plotly", "rlang", "uuid"] }, "boxplotcluster": { "name": "boxplotcluster", @@ -44291,7 +44729,7 @@ "name": "bpDir", "version": "0.1.2", "sha256": "1wkj25srsbidpcvgm6c74584ahybjy39r86dxir1vd13kbi8l120", - "depends": ["circular", "MASS", "plotrix"] + "depends": ["MASS", "circular", "plotrix"] }, "bpa": { "name": "bpa", @@ -44321,13 +44759,13 @@ "name": "bpgmm", "version": "1.0.9", "sha256": "0wrdh4c8yws7z5zd1yl23wbja88x57x651kqbnqj70k9a1195rwc", - "depends": ["fabMix", "gtools", "label_switching", "MASS", "mclust", "mcmcse", "mvtnorm", "pgmm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "fabMix", "gtools", "label_switching", "mclust", "mcmcse", "mvtnorm", "pgmm"] }, "bpmnR": { "name": "bpmnR", "version": "0.1.1", "sha256": "0cskqfib5fw34zfqms4dp53cwb7z0cricr452a4cjfw563kjhmqf", - "depends": ["DiagrammeR", "DiagrammeRsvg", "dplyr", "DT", "glue", "htmltools", "htmlwidgets", "huxtable", "knitr", "purrr", "readr", "rlang", "rvest", "stringr", "tidyr", "uuid", "xml2"] + "depends": ["DT", "DiagrammeR", "DiagrammeRsvg", "dplyr", "glue", "htmltools", "htmlwidgets", "huxtable", "knitr", "purrr", "readr", "rlang", "rvest", "stringr", "tidyr", "uuid", "xml2"] }, "bpmnVisualizationR": { "name": "bpmnVisualizationR", @@ -44339,7 +44777,7 @@ "name": "bpnreg", "version": "2.0.3", "sha256": "1yy1rbbnqjrz0dkpvwi49432ddpjbql0vrpwvhzv9qzpv8ydvlw4", - "depends": ["BH", "haven", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "haven"] }, "bpp": { "name": "bpp", @@ -44351,13 +44789,13 @@ "name": "bpr", "version": "1.0.8", "sha256": "1hiwz1s8gc6skl0zg7mjh29bxazka9wgrbbldqhy6f9vzrddl4pn", - "depends": ["BH", "coda", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "coda"] }, "bqror": { "name": "bqror", "version": "1.7.0", "sha256": "1pisp3p3w5r9bfv5m5yykk410z5qvwsqdblmv7vsj1sc1nwf5y2v", - "depends": ["GIGrvg", "invgamma", "MASS", "NPflow", "pracma", "progress", "truncnorm"] + "depends": ["GIGrvg", "MASS", "NPflow", "invgamma", "pracma", "progress", "truncnorm"] }, "bqtl": { "name": "bqtl", @@ -44369,7 +44807,7 @@ "name": "braQCA", "version": "1.2.1.29", "sha256": "0w1mg8lzl64mp5clinq3zai733iz3628zp4pw6vr51z24s56jg6i", - "depends": ["bootstrap", "dplyr", "QCA"] + "depends": ["QCA", "bootstrap", "dplyr"] }, "bracer": { "name": "bracer", @@ -44411,13 +44849,13 @@ "name": "brainGraph", "version": "3.1.0", "sha256": "009m3297bn1jl1aacypajkdawgjp3pwx7krz3bxifb0bmrdi0n7b", - "depends": ["abind", "data_table", "doParallel", "foreach", "igraph", "lattice", "MASS", "Matrix", "permute"] + "depends": ["MASS", "Matrix", "abind", "data_table", "doParallel", "foreach", "igraph", "lattice", "permute"] }, "brainKCCA": { "name": "brainKCCA", "version": "0.1.0", "sha256": "1ag3qahlba4h4126873hg2bbi6sr729mhiw22gjgr4g4jg6lhh09", - "depends": ["brainR", "CCA", "elasticnet", "kernlab", "knitr", "misc3d", "oro_nifti", "rgl"] + "depends": ["CCA", "brainR", "elasticnet", "kernlab", "knitr", "misc3d", "oro_nifti", "rgl"] }, "brainR": { "name": "brainR", @@ -44459,12 +44897,12 @@ "name": "brclimr", "version": "0.2.0", "sha256": "11870q60spq4pi7d6yvly48x8n9is15cj957aq8h7bw2lgcyzb1z", - "depends": ["checkmate", "DBI", "duckdb", "glue", "lobstr", "magrittr", "rlang"] + "depends": ["DBI", "checkmate", "duckdb", "glue", "lobstr", "magrittr", "rlang"] }, "brea": { "name": "brea", - "version": "0.2.0", - "sha256": "0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04", + "version": "0.3.1", + "sha256": "1sh0m4hfik0kzc19ygqcbrxn67n52zz9l90gs494iqqwj1fzs8f7", "depends": [] }, "bread": { @@ -44483,31 +44921,31 @@ "name": "breakaway", "version": "4.8.4", "sha256": "08mxp41d79iaqbz96bpzw7halasijghv0557ccz5p563y5lk3n3m", - "depends": ["ggplot2", "lme4", "magrittr", "MASS", "phyloseq", "tibble"] + "depends": ["MASS", "ggplot2", "lme4", "magrittr", "phyloseq", "tibble"] }, "breakfast": { "name": "breakfast", "version": "2.4", "sha256": "0sxila1l2pk1z8lmskqppd8qm7wg08vvyyqxfyxcffvwhzqaf3rj", - "depends": ["ggplot2", "plyr", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "plyr"] }, "breakpoint": { "name": "breakpoint", "version": "1.2", "sha256": "004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9", - "depends": ["doParallel", "foreach", "ggplot2", "MASS", "msm"] + "depends": ["MASS", "doParallel", "foreach", "ggplot2", "msm"] }, "breathtestcore": { "name": "breathtestcore", "version": "0.8.7", "sha256": "0i5mih2v6397g0glgdhn5lrz3j0l6yv3pmlvs9pkg2vbjppif2sc", - "depends": ["assertthat", "broom", "dplyr", "ggfittext", "ggplot2", "MASS", "multcomp", "nlme", "purrr", "readr", "readxl", "signal", "stringr", "tibble", "tidyr", "xml2"] + "depends": ["MASS", "assertthat", "broom", "dplyr", "ggfittext", "ggplot2", "multcomp", "nlme", "purrr", "readr", "readxl", "signal", "stringr", "tibble", "tidyr", "xml2"] }, "breathteststan": { "name": "breathteststan", "version": "0.8.5", "sha256": "1b495qb0r8wdh4rnv3namnhrd1d6mba55ayj7h9s0076h8aw04hk", - "depends": ["BH", "breathtestcore", "dplyr", "purrr", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "stringr", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "breathtestcore", "dplyr", "purrr", "rstan", "rstantools", "stringr", "tidyr"] }, "brew": { "name": "brew", @@ -44525,7 +44963,7 @@ "name": "brglm2", "version": "0.9.2", "sha256": "0islmx4kdy22qn2cq7lpzqq6lc6mci5qly645nfdhad9001jmhsa", - "depends": ["enrichwith", "MASS", "Matrix", "nnet", "numDeriv"] + "depends": ["MASS", "Matrix", "enrichwith", "nnet", "numDeriv"] }, "briKmeans": { "name": "briKmeans", @@ -44561,7 +44999,7 @@ "name": "bridgesampling", "version": "1.1-2", "sha256": "0sry1xwiv4y52k44hq6z8y2kysp5kxgl4dix3m94svg3ladd7v2l", - "depends": ["Brobdingnag", "coda", "Matrix", "mvtnorm", "scales", "stringr"] + "depends": ["Brobdingnag", "Matrix", "coda", "mvtnorm", "scales", "stringr"] }, "brif": { "name": "brif", @@ -44573,7 +45011,7 @@ "name": "brinton", "version": "0.2.7", "sha256": "1z2d7a1wq5ms5j0mn2hgqvvp9x3mfvxw4llia8d0bs0mpm0jkjvn", - "depends": ["forcats", "GGally", "ggplot2", "glue", "gridExtra", "lubridate", "pander", "patchwork", "RColorBrewer", "rmarkdown", "scales", "sm", "tibble"] + "depends": ["GGally", "RColorBrewer", "forcats", "ggplot2", "glue", "gridExtra", "lubridate", "pander", "patchwork", "rmarkdown", "scales", "sm", "tibble"] }, "brio": { "name": "brio", @@ -44597,7 +45035,7 @@ "name": "brlrmr", "version": "0.1.7", "sha256": "0s47qz8y416x0gz91pzdpr97pmlvddwkvll454vnlafxxk9p5lds", - "depends": ["boot", "brglm", "MASS", "profileModel", "Rcpp"] + "depends": ["MASS", "Rcpp", "boot", "brglm", "profileModel"] }, "brm": { "name": "brm", @@ -44609,19 +45047,19 @@ "name": "brms", "version": "2.21.0", "sha256": "0n2xxiibypfazcbx8rx4h5c4pl9zlmm0mkpyny23bf54q8rzz2bj", - "depends": ["abind", "backports", "bayesplot", "bridgesampling", "coda", "future", "future_apply", "ggplot2", "glue", "loo", "Matrix", "matrixStats", "mgcv", "nleqslv", "nlme", "posterior", "Rcpp", "rlang", "rstan", "rstantools"] + "depends": ["Matrix", "Rcpp", "abind", "backports", "bayesplot", "bridgesampling", "coda", "future", "future_apply", "ggplot2", "glue", "loo", "matrixStats", "mgcv", "nleqslv", "nlme", "posterior", "rlang", "rstan", "rstantools"] }, "brms_mmrm": { "name": "brms.mmrm", - "version": "1.0.0", - "sha256": "12srwi69mkhnj2m711r9pag89jlmxxsjksr1fhb5w5cbn0lyk9in", - "depends": ["brms", "dplyr", "ggplot2", "ggridges", "MASS", "posterior", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "trialr", "zoo"] + "version": "1.1.0", + "sha256": "1v64wx6nylzrfzby8p7l3s1dn6naqnjw7vamlwm12xvq303xgap1", + "depends": ["MASS", "brms", "dplyr", "ggplot2", "ggridges", "posterior", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "trialr", "zoo"] }, "brmsmargins": { "name": "brmsmargins", "version": "0.2.0", "sha256": "1qdfig1cy5cf3csky995m0jybb2hyp7yq7ka67wircrln919c1nm", - "depends": ["bayestestR", "brms", "data_table", "extraoperators", "posterior", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "bayestestR", "brms", "data_table", "extraoperators", "posterior"] }, "brnn": { "name": "brnn", @@ -44681,7 +45119,7 @@ "name": "brsim", "version": "0.3", "sha256": "15clv6gfvvfclj9wmb6hr4ljfvs28spamq9rqj12nwzz5fihyhi9", - "depends": ["cluster", "corrplot", "RcmdrMisc"] + "depends": ["RcmdrMisc", "cluster", "corrplot"] }, "bruceR": { "name": "bruceR", @@ -44705,7 +45143,7 @@ "name": "brxx", "version": "0.1.2", "sha256": "08qlfnf84k3yjcvr1wm6gd96mk26xf2gz59ychb3m981228hbbs6", - "depends": ["blavaan", "blme", "GPArotation", "MASS", "MCMCpack", "rstan", "TeachingDemos"] + "depends": ["GPArotation", "MASS", "MCMCpack", "TeachingDemos", "blavaan", "blme", "rstan"] }, "bs4Dash": { "name": "bs4Dash", @@ -44735,7 +45173,7 @@ "name": "bsamGP", "version": "1.2.5", "sha256": "1792kksvpzinap83asyz6iz7mp7xyi0a7lppxx1m8as7jwnk2nsk", - "depends": ["ggplot2", "gridExtra", "MASS"] + "depends": ["MASS", "ggplot2", "gridExtra"] }, "bscui": { "name": "bscui", @@ -44771,7 +45209,7 @@ "name": "bsitar", "version": "0.2.1", "sha256": "1h18hk5qr3lcxy0iqhz2wfxhvyjl1bs45y78skx070qbxrgwai5z", - "depends": ["brms", "dplyr", "insight", "loo", "magrittr", "marginaleffects", "Rdpack", "rlang", "rstan", "sitar"] + "depends": ["Rdpack", "brms", "dplyr", "insight", "loo", "magrittr", "marginaleffects", "rlang", "rstan", "sitar"] }, "bskyr": { "name": "bskyr", @@ -44781,8 +45219,8 @@ }, "bslib": { "name": "bslib", - "version": "0.7.0", - "sha256": "181cfmdvi64j978q8x69bl7wxwpjpx54a52sh4xng0pk3a2djd91", + "version": "0.8.0", + "sha256": "00sbskl5f4mif2x54h5z3m2kv8ij2wv84a61n39931hj3gdjs67x", "depends": ["base64enc", "cachem", "fastmap", "htmltools", "jquerylib", "jsonlite", "lifecycle", "memoise", "mime", "rlang", "sass"] }, "bsnsing": { @@ -44795,7 +45233,7 @@ "name": "bspcov", "version": "1.0.0", "sha256": "1zxdcqydhzisfp2bkvw585z3qfcpy0yjra91qyxwdf0lvdvqwbqx", - "depends": ["BayesFactor", "caret", "CholWishart", "coda", "dplyr", "FinCovRegularization", "furrr", "future", "ggmcmc", "ggplot2", "GIGrvg", "ks", "magrittr", "MASS", "Matrix", "matrixcalc", "matrixStats", "mvnfast", "mvtnorm", "plyr", "progress", "purrr", "RSpectra"] + "depends": ["BayesFactor", "CholWishart", "FinCovRegularization", "GIGrvg", "MASS", "Matrix", "RSpectra", "caret", "coda", "dplyr", "furrr", "future", "ggmcmc", "ggplot2", "ks", "magrittr", "matrixStats", "matrixcalc", "mvnfast", "mvtnorm", "plyr", "progress", "purrr"] }, "bspec": { "name": "bspec", @@ -44805,9 +45243,9 @@ }, "bspline": { "name": "bspline", - "version": "2.2", - "sha256": "0v7kbg7h0d0s2ywvjpahk2y2ncbv8kmacdznaixxakccqbl8piip", - "depends": ["arrApply", "nlsic", "Rcpp", "RcppArmadillo"] + "version": "2.2.2", + "sha256": "1m214gp6kjpl56vd7w8h1lwgwrh46pds5i77ilvgiv64nrccqih7", + "depends": ["Rcpp", "RcppArmadillo", "arrApply", "nlsic"] }, "bsplinePsd": { "name": "bsplinePsd", @@ -44843,7 +45281,7 @@ "name": "bssm", "version": "2.0.2", "sha256": "121fb12n5z3w97xpj5ga1985drv3h4g7b0xy5yk9sfqfaqf92yyn", - "depends": ["bayesplot", "checkmate", "coda", "diagis", "dplyr", "posterior", "ramcmc", "Rcpp", "RcppArmadillo", "rlang", "sitmo", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "bayesplot", "checkmate", "coda", "diagis", "dplyr", "posterior", "ramcmc", "rlang", "sitmo", "tidyr"] }, "bssn": { "name": "bssn", @@ -44873,25 +45311,37 @@ "name": "bsub", "version": "1.1.0", "sha256": "112hlvg15jlzg3drfzkslaly42vnvsycn9vif0w3iaw5fzsaa954", - "depends": ["clisymbols", "crayon", "digest", "GetoptLong", "GlobalOptions"] + "depends": ["GetoptLong", "GlobalOptions", "clisymbols", "crayon", "digest"] + }, + "bsvarSIGNs": { + "name": "bsvarSIGNs", + "version": "1.0.1", + "sha256": "15kjmjzrn5vp9r35mjyh009v174jlz670kqchz6jhp7yqlxhnbqc", + "depends": ["R6", "Rcpp", "RcppArmadillo", "RcppProgress", "bsvars"] }, "bsvars": { "name": "bsvars", - "version": "2.1.0", - "sha256": "1gnjl27ik6p8zsis8fdqhwdzp2jp0kyqnidil4jgy02fiwdww6c5", + "version": "3.1", + "sha256": "138810300y0lfmzbch5syp3sd2cfcvqvgnnvvy4xlbys9p6aif5a", "depends": ["GIGrvg", "R6", "Rcpp", "RcppArmadillo", "RcppProgress", "RcppTN", "stochvol"] }, + "bsynth": { + "name": "bsynth", + "version": "1.0", + "sha256": "1hgq999pkk54cnw21xgpmksr1x4lr2y23c3ma8fyn4637mqa0z7r", + "depends": ["BH", "R6", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cubelyr", "dplyr", "ggplot2", "glue", "magrittr", "purrr", "rlang", "rstan", "rstantools", "scales", "tibble", "tidyr", "vizdraws"] + }, "btb": { "name": "btb", "version": "0.2.0", "sha256": "1gm03md6ky134nzmnnp054mi2w8kl4bgcgg4k65zf2cyniz4arxq", - "depends": ["BH", "dplyr", "magrittr", "mapsf", "Rcpp", "RcppArmadillo", "RcppParallel", "sf"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "RcppParallel", "dplyr", "magrittr", "mapsf", "sf"] }, "btergm": { "name": "btergm", "version": "1.10.12", "sha256": "1xcn24m6ldmi5wh44169vg13f7a7apbk45iwsl88clbnf2l9wpb8", - "depends": ["boot", "coda", "ergm", "igraph", "Matrix", "network", "ROCR", "sna", "statnet_common"] + "depends": ["Matrix", "ROCR", "boot", "coda", "ergm", "igraph", "network", "sna", "statnet_common"] }, "bubbleHeatmap": { "name": "bubbleHeatmap", @@ -44927,7 +45377,7 @@ "name": "bulkAnalyseR", "version": "1.1.0", "sha256": "008vnkcaa26d8620i1l49mbcr7px5x16s5x2wlq1vm0jkxya4c3z", - "depends": ["circlize", "ComplexHeatmap", "DESeq2", "dplyr", "DT", "edgeR", "GENIE3", "ggforce", "ggnewscale", "ggplot2", "ggrastr", "ggrepel", "ggVennDiagram", "glue", "gprofiler2", "magrittr", "matrixStats", "noisyr", "preprocessCore", "RColorBrewer", "rlang", "scales", "shiny", "shinyjqui", "shinyjs", "shinyLP", "shinyWidgets", "stringr", "tibble", "tidyr", "UpSetR", "visNetwork"] + "depends": ["ComplexHeatmap", "DESeq2", "DT", "GENIE3", "RColorBrewer", "UpSetR", "circlize", "dplyr", "edgeR", "ggVennDiagram", "ggforce", "ggnewscale", "ggplot2", "ggrastr", "ggrepel", "glue", "gprofiler2", "magrittr", "matrixStats", "noisyr", "preprocessCore", "rlang", "scales", "shiny", "shinyLP", "shinyWidgets", "shinyjqui", "shinyjs", "stringr", "tibble", "tidyr", "visNetwork"] }, "bulkQC": { "name": "bulkQC", @@ -44945,7 +45395,7 @@ "name": "bulletcp", "version": "1.0.0", "sha256": "1k7lw8gflih47ncz8hgsj0sxbajnkhz1k7yb7rwbdnzcki3n3jln", - "depends": ["assertthat", "dplyr", "mvtnorm", "Rdpack"] + "depends": ["Rdpack", "assertthat", "dplyr", "mvtnorm"] }, "bulletr": { "name": "bulletr", @@ -44969,13 +45419,13 @@ "name": "bumbl", "version": "1.0.3", "sha256": "16fpd62wkvjd25wv80rlp01q57sacx1jjww5j1v6hifc8097wj0i", - "depends": ["broom", "dplyr", "ggplot2", "glue", "lifecycle", "MASS", "purrr", "rlang", "tidyr"] + "depends": ["MASS", "broom", "dplyr", "ggplot2", "glue", "lifecycle", "purrr", "rlang", "tidyr"] }, "bumblebee": { "name": "bumblebee", "version": "0.1.0", "sha256": "055plkcswq7qsy3flkjjq5kqampj9s8dbc3ahzinps6s0jkcv2ad", - "depends": ["dplyr", "gtools", "Hmisc", "magrittr", "rmarkdown"] + "depends": ["Hmisc", "dplyr", "gtools", "magrittr", "rmarkdown"] }, "bunching": { "name": "bunching", @@ -45021,15 +45471,15 @@ }, "burgle": { "name": "burgle", - "version": "0.1.0", - "sha256": "11696f86vh2iflc6fignvip206kfsh3hh17x764jgng587v59zz2", + "version": "0.1.1", + "sha256": "05i5n3a9l087wcyvgdf638961i19d939zfv3d58h3cxhxsnyn4c4", "depends": ["MASS", "riskRegression", "survival"] }, "burnr": { "name": "burnr", "version": "0.6.1", "sha256": "0pgki4inyql8h10i78yzqm73jy2h7rdp9ywsk65virxaadpngy9c", - "depends": ["forcats", "ggplot2", "MASS", "plyr", "reshape2", "rlang", "stringr", "tidyr"] + "depends": ["MASS", "forcats", "ggplot2", "plyr", "reshape2", "rlang", "stringr", "tidyr"] }, "bursa": { "name": "bursa", @@ -45077,13 +45527,13 @@ "name": "bvartools", "version": "0.2.4", "sha256": "0klbzxqypqm5v549k56fvl67yri7bwaazf02ypsg6xyriz2a9ck4", - "depends": ["coda", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "coda"] }, "bvhar": { "name": "bvhar", "version": "2.0.1", "sha256": "1qbws3xa93ladgwfqdyk3qzmijhdam3lhdzwpbb5q5397mqkyfbp", - "depends": ["bayesplot", "BH", "dplyr", "foreach", "ggplot2", "lifecycle", "magrittr", "optimParallel", "posterior", "purrr", "Rcpp", "RcppEigen", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "bayesplot", "dplyr", "foreach", "ggplot2", "lifecycle", "magrittr", "optimParallel", "posterior", "purrr", "tibble", "tidyr"] }, "bvls": { "name": "bvls", @@ -45113,7 +45563,7 @@ "name": "bws", "version": "0.1.0", "sha256": "11gci4z434n68agc71ab16br8yp8fd1lylgnaqz7p7w676yrygn8", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "bwsTools": { "name": "bwsTools", @@ -45179,7 +45629,7 @@ "name": "cAIC4", "version": "1.0", "sha256": "1qg73g0g029wkzpmp0fgvyfz8p1k3x38yqx0404cpb3dxj4n4hcg", - "depends": ["lme4", "Matrix", "mgcv", "mvtnorm", "nlme", "RLRsim"] + "depends": ["Matrix", "RLRsim", "lme4", "mgcv", "mvtnorm", "nlme"] }, "cIRT": { "name": "cIRT", @@ -45189,9 +45639,9 @@ }, "cNORM": { "name": "cNORM", - "version": "3.0.4", - "sha256": "1qhp59hz9k2yq7rb60v9zv0bfnrfz99dk74v5fbip1wadzcbyrnp", - "depends": ["lattice", "latticeExtra", "leaps"] + "version": "3.2.0", + "sha256": "038192srvmfasa9vg5d79imh9nr3pllf2lcn5q5gwgas38c4mmli", + "depends": ["ggplot2", "leaps"] }, "cOde": { "name": "cOde", @@ -45215,13 +45665,13 @@ "name": "cSEM", "version": "0.5.0", "sha256": "0a0pv01ynlac53rdwjhw20alx72ip23izvcxv8bdkdxa41ai3bi5", - "depends": ["alabama", "cli", "crayon", "expm", "future", "future_apply", "lavaan", "lifecycle", "magrittr", "MASS", "Matrix", "matrixcalc", "matrixStats", "polycor", "progressr", "psych", "purrr", "Rdpack", "rlang", "symmoments", "TruncatedNormal"] + "depends": ["MASS", "Matrix", "Rdpack", "TruncatedNormal", "alabama", "cli", "crayon", "expm", "future", "future_apply", "lavaan", "lifecycle", "magrittr", "matrixStats", "matrixcalc", "polycor", "progressr", "psych", "purrr", "rlang", "symmoments"] }, "cTOST": { "name": "cTOST", "version": "1.0.0", "sha256": "15vynxc2zyqv0wly4paa4b2j5z0yw0qqkm2adsj9cm5x7cfv1k4p", - "depends": ["cli", "knitr", "OwenQ", "PowerTOST", "rmarkdown"] + "depends": ["OwenQ", "PowerTOST", "cli", "knitr", "rmarkdown"] }, "ca": { "name": "ca", @@ -45233,12 +45683,12 @@ "name": "caROC", "version": "0.1.5", "sha256": "0cklvzfg95yyr37hdfmrna2z6lnhf9f6rrqcjsba1wjmqs8abgsh", - "depends": ["quantreg", "RColorBrewer"] + "depends": ["RColorBrewer", "quantreg"] }, "caRamel": { "name": "caRamel", - "version": "1.3", - "sha256": "0l83z74q1as4w33vqsbybyz2vkdqgw7y56jkw0s6f36mph8fdpf9", + "version": "1.4", + "sha256": "17g1y634a02819kw19kbvifzpsacifvgw2gifjmw99vf1mijyj9h", "depends": ["geometry"] }, "caRecall": { @@ -45257,7 +45707,7 @@ "name": "cabinets", "version": "0.6.0", "sha256": "1pypn29v91zqncv5kxinfz0f633qmic7n87rf4amjrq83iiid6md", - "depends": ["cli", "crayon", "fs", "git2r", "glue", "R6", "renv", "rstudioapi", "stringr"] + "depends": ["R6", "cli", "crayon", "fs", "git2r", "glue", "renv", "rstudioapi", "stringr"] }, "cabootcrs": { "name": "cabootcrs", @@ -45341,13 +45791,13 @@ "name": "calibmsm", "version": "1.1.1", "sha256": "1yg5m2zsiw005fdihlilk43h27c7yyzlnbsb32qr9k67q010rk00", - "depends": ["boot", "dplyr", "ggExtra", "ggplot2", "ggpubr", "gridExtra", "Hmisc", "mstate", "rms", "survival", "tidyr", "VGAM"] + "depends": ["Hmisc", "VGAM", "boot", "dplyr", "ggExtra", "ggplot2", "ggpubr", "gridExtra", "mstate", "rms", "survival", "tidyr"] }, "calibrar": { "name": "calibrar", "version": "0.9.0", "sha256": "10ig891vbxc9wqpmf5pmqyz9pi7mp4nicipmwgjbsygrqkqy0m0v", - "depends": ["BB", "cmaes", "DEoptim", "dfoptim", "foreach", "GenSA", "lbfgsb3c", "minqa", "optimx", "pso", "rgenoud", "soma", "stringr"] + "depends": ["BB", "DEoptim", "GenSA", "cmaes", "dfoptim", "foreach", "lbfgsb3c", "minqa", "optimx", "pso", "rgenoud", "soma", "stringr"] }, "calibrate": { "name": "calibrate", @@ -45359,13 +45809,13 @@ "name": "calibrateBinary", "version": "0.1", "sha256": "1k6sl4bg05piyczpk6wsva914gcmy8viyz4423gx9i6ddflb7xdb", - "depends": ["gelnet", "GPfit", "kernlab", "randtoolbox"] + "depends": ["GPfit", "gelnet", "kernlab", "randtoolbox"] }, "calibrationband": { "name": "calibrationband", "version": "0.2.1", "sha256": "1m3dp7h9dy1ipji3vinknqyhbw1gbv48473rbhpykps8hzrqg206", - "depends": ["dplyr", "ggplot2", "magrittr", "Rcpp", "rlang", "sp", "tibble", "tidyr", "tidyselect"] + "depends": ["Rcpp", "dplyr", "ggplot2", "magrittr", "rlang", "sp", "tibble", "tidyr", "tidyselect"] }, "calibrator": { "name": "calibrator", @@ -45381,15 +45831,21 @@ }, "callback": { "name": "callback", - "version": "0.1.0", - "sha256": "069dqihw5ll9n5n35vya5jqy9rc9r46g4jyw6b2dbz4s4sblimsq", + "version": "0.1.1", + "sha256": "04j00c8i14i3ic3ccdglj8fyaa9924dsgmichidk8jh2qj7c22ny", + "depends": ["ggplot2"] + }, + "callme": { + "name": "callme", + "version": "0.1.10", + "sha256": "1agyflf9ch5xyxmfdcv6shxz8h7ibp6rd3d6x1g7gk1cblvshlar", "depends": [] }, "callr": { "name": "callr", "version": "3.7.6", "sha256": "1y2ildc0ni01lkcircbr648f5knq6ch6smh5xap2xr39x1ky7g74", - "depends": ["processx", "R6"] + "depends": ["R6", "processx"] }, "callsync": { "name": "callsync", @@ -45401,13 +45857,13 @@ "name": "calmate", "version": "0.13.0", "sha256": "17gfk3am8frj9pqx31pmjswm5nvca9nqbanl0qj4ypsr8wymix7w", - "depends": ["aroma_core", "MASS", "matrixStats", "R_filesets", "R_methodsS3", "R_oo", "R_utils"] + "depends": ["MASS", "R_filesets", "R_methodsS3", "R_oo", "R_utils", "aroma_core", "matrixStats"] }, "calmr": { "name": "calmr", "version": "0.6.1", "sha256": "11hb2d9a5vzda94qb3pg440vgch2pfn8jhkw71hj6xzw8aqylhs3", - "depends": ["data_table", "future", "future_apply", "GA", "ggnetwork", "ggplot2", "network", "patchwork", "progressr", "rlang"] + "depends": ["GA", "data_table", "future", "future_apply", "ggnetwork", "ggplot2", "network", "patchwork", "progressr", "rlang"] }, "calpassapi": { "name": "calpassapi", @@ -45441,9 +45897,9 @@ }, "campsis": { "name": "campsis", - "version": "1.5.2", - "sha256": "01ylxdvl0wi313r5mj8s6xz596b7an08hslrym2y69c9qv8a62cg", - "depends": ["assertthat", "campsismod", "digest", "dplyr", "furrr", "future", "ggplot2", "MASS", "plyr", "progressr", "purrr", "rlang", "tibble", "tidyr"] + "version": "1.5.3", + "sha256": "0xjwx33y383a8ax9vwd30zsb3k7l0g95llnrgjpmmj4inrarb5a7", + "depends": ["MASS", "assertthat", "campsismod", "digest", "dplyr", "furrr", "future", "ggplot2", "plyr", "progressr", "purrr", "rlang", "tibble", "tidyr"] }, "campsismod": { "name": "campsismod", @@ -45465,8 +45921,8 @@ }, "camtrapdp": { "name": "camtrapdp", - "version": "0.2.1", - "sha256": "0nx9w5h8py8cjqynlknh8klvzy2mhacv96vybkv7hcyhpdsnmfs7", + "version": "0.3.1", + "sha256": "0aspfqjiv5xq8p7rchg4aqsnl0s7692pgq1bvgiq3i0vhlwizcd5", "depends": ["cli", "dplyr", "frictionless", "memoise", "purrr", "readr"] }, "canadamaps": { @@ -45479,7 +45935,7 @@ "name": "canadianmaps", "version": "2.0.0", "sha256": "08kf6jxvqh6kyfb639kdqpq33qlrpaz94ayknbj13hm4asgsn3w5", - "depends": ["dplyr", "ggplot2", "ggrepel", "RColorBrewer", "sf", "sp"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggrepel", "sf", "sp"] }, "canaper": { "name": "canaper", @@ -45521,12 +45977,12 @@ "name": "cansim", "version": "0.3.16", "sha256": "144p7zc44xb0szslsrxg1q1lhn5rizlgc0rvsinwzglnkzl478p2", - "depends": ["DBI", "digest", "dplyr", "httr", "jsonlite", "purrr", "readr", "rlang", "RSQLite", "rvest", "stringr", "tibble", "xml2"] + "depends": ["DBI", "RSQLite", "digest", "dplyr", "httr", "jsonlite", "purrr", "readr", "rlang", "rvest", "stringr", "tibble", "xml2"] }, "canvasXpress": { "name": "canvasXpress", - "version": "1.46.9-1", - "sha256": "0zb6cgpxzd9245jzabvw9x09ziihkfjc3gx1qclpqkvdbyq85qx6", + "version": "1.50.5", + "sha256": "04ibr6ksqcn7kngxy65gqx8cc2p1a5acpwg2m800csnn0x7yk05x", "depends": ["htmltools", "htmlwidgets", "httr", "jsonlite"] }, "canvasXpress_data": { @@ -45539,13 +45995,13 @@ "name": "cape", "version": "3.1.2", "sha256": "01bxyhn0kk07yx4012px6cys0csqgrsf2n5abdg22vr7ky7phqja", - "depends": ["abind", "caTools", "corpcor", "doParallel", "evd", "foreach", "here", "igraph", "Matrix", "pheatmap", "pracma", "propagate", "qtl", "qtl2", "qtl2convert", "R6", "RColorBrewer", "regress", "shape", "yaml"] + "depends": ["Matrix", "R6", "RColorBrewer", "abind", "caTools", "corpcor", "doParallel", "evd", "foreach", "here", "igraph", "pheatmap", "pracma", "propagate", "qtl", "qtl2", "qtl2convert", "regress", "shape", "yaml"] }, "caper": { "name": "caper", "version": "1.0.3", "sha256": "1f1mw54gv1r40wrrsznhgffdj8ggrwihiwdd8wyqccyvqm49fxjg", - "depends": ["ape", "MASS", "mvtnorm"] + "depends": ["MASS", "ape", "mvtnorm"] }, "capitalR": { "name": "capitalR", @@ -45569,7 +46025,7 @@ "name": "capm", "version": "0.14.0", "sha256": "0c3rnc1qd9c4v0jj8ihg6bdhpqvfnpafkqyqkar6fwnlvgw48z83", - "depends": ["circlize", "deSolve", "dplyr", "FME", "ggplot2", "magrittr", "sf", "survey", "tidyr"] + "depends": ["FME", "circlize", "deSolve", "dplyr", "ggplot2", "magrittr", "sf", "survey", "tidyr"] }, "capn": { "name": "capn", @@ -45593,7 +46049,7 @@ "name": "car", "version": "3.1-2", "sha256": "1j3l8r3j05769gdfrqz0n38xviq6pww1cjrgdd0fkj3sjy8k89l9", - "depends": ["abind", "carData", "lme4", "MASS", "mgcv", "nlme", "nnet", "pbkrtest", "quantreg", "scales"] + "depends": ["MASS", "abind", "carData", "lme4", "mgcv", "nlme", "nnet", "pbkrtest", "quantreg", "scales"] }, "carData": { "name": "carData", @@ -45605,25 +46061,25 @@ "name": "carSurv", "version": "1.0.0", "sha256": "0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j", - "depends": ["corpcor", "fdrtool", "mboost", "Rcpp", "survival"] + "depends": ["Rcpp", "corpcor", "fdrtool", "mboost", "survival"] }, "caracas": { "name": "caracas", "version": "2.1.1", "sha256": "0q967hv6hr62sqhqk8vk313g16hg75igwb7idmd8w0zsqaqvac9v", - "depends": ["doBy", "magrittr", "Matrix", "reticulate"] + "depends": ["Matrix", "doBy", "magrittr", "reticulate"] }, "carat": { "name": "carat", "version": "2.2.1", "sha256": "0h7l448b9vxmfdvi3zq3xgzprh0nrwvm1c2bg9d4yfbz92y2ndfc", - "depends": ["ggplot2", "gridExtra", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra", "stringr"] }, "carbonate": { "name": "carbonate", "version": "0.1.4", "sha256": "01k8c49v8ybgcwdr9ipw319lxw4p14w9bzl54j1ljbajdzgzcgwk", - "depends": ["clipr", "details", "httpuv", "httr", "jsonlite", "magick", "R6", "RSelenium", "rtweet", "wdman", "yaml"] + "depends": ["R6", "RSelenium", "clipr", "details", "httpuv", "httr", "jsonlite", "magick", "rtweet", "wdman", "yaml"] }, "carbondate": { "name": "carbondate", @@ -45635,13 +46091,13 @@ "name": "carcass", "version": "1.7", "sha256": "09l9yk7knfjhrcpwfwmgla9ghnpg1b10aljmdl70j5kxdiafkfn7", - "depends": ["arm", "expm", "lme4", "MASS", "survival"] + "depends": ["MASS", "arm", "expm", "lme4", "survival"] }, "card": { "name": "card", "version": "0.1.0", "sha256": "1api0j06fp5av5a48vnnm1wvwdcskynf0xsj9pb41njxdh9v8daf", - "depends": ["broom", "data_table", "dplyr", "generics", "ggplot2", "ggrepel", "hardhat", "Hmisc", "lubridate", "lutz", "magrittr", "purrr", "readr", "recipes", "rlang", "sf", "stringr", "survival", "tibble", "tidyr"] + "depends": ["Hmisc", "broom", "data_table", "dplyr", "generics", "ggplot2", "ggrepel", "hardhat", "lubridate", "lutz", "magrittr", "purrr", "readr", "recipes", "rlang", "sf", "stringr", "survival", "tibble", "tidyr"] }, "cardidates": { "name": "cardidates", @@ -45657,14 +46113,14 @@ }, "cards": { "name": "cards", - "version": "0.1.0", - "sha256": "1a7khr8jzzvhb3lxb088d3akpq0jd7mjnb2y3z445mxl55wqgk2c", + "version": "0.2.1", + "sha256": "1hikcd696f6i74nlqgkfi7nip99xw25pkqxxn78c5bawmxxfq15v", "depends": ["cli", "dplyr", "glue", "rlang", "tidyr", "tidyselect"] }, "cardx": { "name": "cardx", - "version": "0.1.0", - "sha256": "1zw9l8w1jv7hs55jc7c5m2vxmsxv9lfzsvm23zwfpcks4ich26gb", + "version": "0.2.0", + "sha256": "1286hv6d1l6k0rsh996risdzbmby3z2szswvpl0vca5gb8a319ir", "depends": ["cards", "cli", "dplyr", "glue", "rlang", "tidyr"] }, "care": { @@ -45677,7 +46133,7 @@ "name": "care4cmodel", "version": "1.0.2", "sha256": "0526z49v4mxfxjlpzjnqyzc8j2lvj1aw47f3izsk1vrs193vxnvw", - "depends": ["deSolve", "dplyr", "ggplot2", "purrr", "Rdpack", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Rdpack", "deSolve", "dplyr", "ggplot2", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "careless": { "name": "careless", @@ -45695,13 +46151,13 @@ "name": "caret", "version": "6.0-94", "sha256": "1a191n9qswvf8ri6id8picqgdqx15l6mp996v6f77fv0l8yfh597", - "depends": ["e1071", "foreach", "ggplot2", "lattice", "ModelMetrics", "nlme", "plyr", "pROC", "recipes", "reshape2", "withr"] + "depends": ["ModelMetrics", "e1071", "foreach", "ggplot2", "lattice", "nlme", "pROC", "plyr", "recipes", "reshape2", "withr"] }, "caretEnsemble": { "name": "caretEnsemble", - "version": "2.0.3", - "sha256": "14d318czpqpalf18ggd9mx6f4nz3r4zilljvgxzy2a8v450y96ch", - "depends": ["caret", "data_table", "digest", "ggplot2", "gridExtra", "lattice", "pbapply", "plyr"] + "version": "4.0.0", + "sha256": "0hwgr7n2sahs3zlvrnhnk6yfmqpmphkl4xii8aa2x1yjgx3ssxwi", + "depends": ["caret", "data_table", "ggplot2", "lattice", "patchwork", "pbapply", "rlang"] }, "caretForecast": { "name": "caretForecast", @@ -45759,8 +46215,8 @@ }, "cartogramR": { "name": "cartogramR", - "version": "1.0-10", - "sha256": "1yviplg837pzlyzhalqybd3pjda6rr2947a766g4wvbpj4qf4b64", + "version": "1.1-0", + "sha256": "1zyrfxknm6acrgc7k8yanqkbznp5nq41y0gdd99b5wrhp7w01qr8", "depends": ["data_table", "sf"] }, "cartographer": { @@ -45769,17 +46225,23 @@ "sha256": "0jdnwrzxrvwcjf80dn0alhgz3713vfhwd4cs7k386x188y38l8ia", "depends": ["cli", "dplyr", "rlang", "sf"] }, + "cartographr": { + "name": "cartographr", + "version": "0.2.2", + "sha256": "0difm4rnsbjr103fhabvg4g41qwa9klpp65k2yzn25x02caypg4v", + "depends": ["cli", "crayon", "ggplot2", "osmdata", "sf", "showtext", "sysfonts"] + }, "cartography": { "name": "cartography", "version": "3.1.4", "sha256": "1sww3n7glkzrpf1ki31z8309qr5496m1rm5gj3cprwif8fxfyjx5", - "depends": ["classInt", "curl", "png", "raster", "Rcpp", "sf", "sp"] + "depends": ["Rcpp", "classInt", "curl", "png", "raster", "sf", "sp"] }, "casabourse": { "name": "casabourse", "version": "2.0.0", "sha256": "1s7zp44cmfnq4l9rzydqpnv9s2z4v7bvng8diz3bhzkg2zhpglnq", - "depends": ["gsheet", "R_utils", "RJSONIO", "rvest"] + "depends": ["RJSONIO", "R_utils", "gsheet", "rvest"] }, "cascadeSelect": { "name": "cascadeSelect", @@ -45791,7 +46253,7 @@ "name": "cascsim", "version": "0.4", "sha256": "0n6frnbby1pjpx1z9lzxflmja2mg0dy99c5f7biakpaqi82x5xjb", - "depends": ["copula", "fitdistrplus", "moments", "R2HTML", "scatterplot3d"] + "depends": ["R2HTML", "copula", "fitdistrplus", "moments", "scatterplot3d"] }, "caseMatch": { "name": "caseMatch", @@ -45801,21 +46263,21 @@ }, "casebase": { "name": "casebase", - "version": "0.10.5", - "sha256": "0i9x0z6b3s2qzdyjsaj4bafk20yhbgggljxdwhmm52b4qm7rrgzz", - "depends": ["data_table", "ggplot2", "mgcv", "survival", "VGAM"] + "version": "0.10.6", + "sha256": "0p2dixiww3l1lwbr512is6prjm606kx8y0wlq90mwfkxbzzq59d9", + "depends": ["VGAM", "data_table", "ggplot2", "mgcv", "survival"] }, "cases": { "name": "cases", "version": "0.1.1", "sha256": "16yfypaqjnl3b99a55mri2j55xaj7dixw76wbpbfa3s4y0zylwpz", - "depends": ["bindata", "boot", "copula", "corrplot", "dplyr", "extraDistr", "ggplot2", "magrittr", "Matrix", "multcomp", "mvtnorm"] + "depends": ["Matrix", "bindata", "boot", "copula", "corrplot", "dplyr", "extraDistr", "ggplot2", "magrittr", "multcomp", "mvtnorm"] }, "casino": { "name": "casino", "version": "0.1.0", "sha256": "07fphn46718gr1zm0xr43mwv7yk697xrc40lxxin315cf3gm0cka", - "depends": ["crayon", "dplyr", "ggplot2", "magrittr", "purrr", "R6", "tibble", "tidyr"] + "depends": ["R6", "crayon", "dplyr", "ggplot2", "magrittr", "purrr", "tibble", "tidyr"] }, "cassandRa": { "name": "cassandRa", @@ -45831,9 +46293,9 @@ }, "castor": { "name": "castor", - "version": "1.8.0", - "sha256": "0caw206hndfzypj33w6npvppdc5hhq1q71wriqd0ck9f238rfi3c", - "depends": ["jsonlite", "Matrix", "naturalsort", "Rcpp", "RSpectra"] + "version": "1.8.2", + "sha256": "1850i35qsxw7dkkblixnp4h5zhwg0ysx8rzns5h0kr9lwmil6biw", + "depends": ["Matrix", "RSpectra", "Rcpp", "jsonlite", "naturalsort"] }, "cat": { "name": "cat", @@ -45863,7 +46325,7 @@ "name": "catSurv", "version": "1.5.0", "sha256": "0jw7jlam7d44g9sbwmxckm4mywhky2a6h1w5w849g47p7mvi32dc", - "depends": ["BH", "jsonlite", "ltm", "plyr", "Rcpp", "RcppArmadillo", "RcppGSL", "RcppParallel"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "RcppGSL", "RcppParallel", "jsonlite", "ltm", "plyr"] }, "cata": { "name": "cata", @@ -45911,19 +46373,19 @@ "name": "catfun", "version": "0.1.4", "sha256": "1482rll333fvy4h58f15flfs7qrck3vk9bzpdn3hayhnmc7svmma", - "depends": ["broom", "cli", "DescTools", "epitools", "Hmisc", "magrittr", "rlang"] + "depends": ["DescTools", "Hmisc", "broom", "cli", "epitools", "magrittr", "rlang"] }, "cati": { "name": "cati", "version": "0.99.4", "sha256": "02g33kkp97kswiyjsd378zpa3fc9rjk2d9f4l1gdh7pzglabsmgl", - "depends": ["ade4", "ape", "e1071", "FD", "geometry", "hypervolume", "nlme", "rasterVis", "vegan"] + "depends": ["FD", "ade4", "ape", "e1071", "geometry", "hypervolume", "nlme", "rasterVis", "vegan"] }, "catlearn": { "name": "catlearn", "version": "1.0", "sha256": "1bzzzqprgyskkf1dnb5k4pqkdn5m67a3pxbnk1cnhscagcjndvy6", - "depends": ["doParallel", "dplyr", "foreach", "Rcpp", "RcppArmadillo", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "dplyr", "foreach", "tidyr"] }, "catmap": { "name": "catmap", @@ -45939,8 +46401,8 @@ }, "catregs": { "name": "catregs", - "version": "0.2.0", - "sha256": "1d5a8mwwyxx6rmm4ngjkgy787x23l9a0crhvn594vhl90r92jpbi", + "version": "0.2.1", + "sha256": "1i94pcfcda0pgvgvfgajmyjg91ia4qi8abjydh3ljywnsjc3bm3p", "depends": [] }, "cats": { @@ -45965,31 +46427,31 @@ "name": "cauchypca", "version": "1.3", "sha256": "157ydm2vizv7cwvxi7id7wws7v0h3iymgwsbvk13q4jlk8ygnnqn", - "depends": ["doParallel", "foreach", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "doParallel", "foreach"] }, "cauphy": { "name": "cauphy", "version": "1.0.2", "sha256": "1jyw6pq17fzpkp6c68cbc7y5bs1y1xhnvd49j7kkypn7ziglpm9s", - "depends": ["ape", "doParallel", "foreach", "HDInterval", "nloptr", "phylolm", "pracma", "robustbase"] + "depends": ["HDInterval", "ape", "doParallel", "foreach", "nloptr", "phylolm", "pracma", "robustbase"] }, "causact": { "name": "causact", "version": "0.5.5", "sha256": "0sf32v47n18sf3x5f08pzl7mc66g95fw6nym02vvyr6a30zv1b5b", - "depends": ["cowplot", "DiagrammeR", "dplyr", "forcats", "ggplot2", "igraph", "lifecycle", "magrittr", "purrr", "reticulate", "rlang", "rstudioapi", "stringr", "tidyr"] + "depends": ["DiagrammeR", "cowplot", "dplyr", "forcats", "ggplot2", "igraph", "lifecycle", "magrittr", "purrr", "reticulate", "rlang", "rstudioapi", "stringr", "tidyr"] }, "causal_decomp": { "name": "causal.decomp", "version": "0.1.0", "sha256": "12iy64dnb91l47vai9qawlwvg17x5amqg0kdj8npk1mgzm2zfz4j", - "depends": ["CBPS", "MASS", "nnet", "PSweight", "spelling", "SuppDists"] + "depends": ["CBPS", "MASS", "PSweight", "SuppDists", "nnet", "spelling"] }, "causalBatch": { "name": "causalBatch", "version": "1.2.0", "sha256": "0jq5a6ch12v55x8fwz6as43wb4q5nc56hqb97jcsgksvsy9cn2g3", - "depends": ["cdcsis", "dplyr", "magrittr", "MatchIt", "nnet", "sva"] + "depends": ["MatchIt", "cdcsis", "dplyr", "magrittr", "nnet", "sva"] }, "causalCmprsk": { "name": "causalCmprsk", @@ -46001,25 +46463,25 @@ "name": "causalDisco", "version": "0.9.1", "sha256": "1lni0y76prhvw60m0awwgmfadwlv1ciywlr85sr8ig2vaxf1smh9", - "depends": ["clipr", "gtools", "igraph", "pcalg", "RColorBrewer", "scales"] + "depends": ["RColorBrewer", "clipr", "gtools", "igraph", "pcalg", "scales"] }, "causalHyperGraph": { "name": "causalHyperGraph", "version": "0.1.0", "sha256": "096ggvryh580lcx4mhzsgbfifc6fqldw30a9ss6cxjvzf00prgkf", - "depends": ["cna", "DiagrammeR", "DiagrammeRsvg", "stringr", "useful"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "cna", "stringr", "useful"] }, "causalOT": { "name": "causalOT", "version": "1.0.2", "sha256": "10fvmhv4g791xhrxdfhyjn02fk0b80z4n9y73l1hhc3fr4vzphz3", - "depends": ["BH", "CBPS", "ggplot2", "lbfgsb3c", "loo", "Matrix", "matrixStats", "osqp", "R6", "Rcpp", "RcppEigen", "rlang", "sandwich", "torch"] + "depends": ["BH", "CBPS", "Matrix", "R6", "Rcpp", "RcppEigen", "ggplot2", "lbfgsb3c", "loo", "matrixStats", "osqp", "rlang", "sandwich", "torch"] }, "causalPAF": { "name": "causalPAF", "version": "1.2.5", "sha256": "1hgixasanddxs9y1l45qmx5chhq0ri6npvzqwazjkk61byl2wj6c", - "depends": ["checkmate", "dagitty", "dplyr", "forestplot", "ggdag", "ggplot2", "gridExtra", "magrittr", "MASS", "reshape2", "rlist"] + "depends": ["MASS", "checkmate", "dagitty", "dplyr", "forestplot", "ggdag", "ggplot2", "gridExtra", "magrittr", "reshape2", "rlist"] }, "causalSLSE": { "name": "causalSLSE", @@ -46049,7 +46511,7 @@ "name": "causaloptim", "version": "0.9.8", "sha256": "0daghglhk4jngv242s1vdi8l1dwcp23gn47vacrs55in5mmpqraj", - "depends": ["igraph", "rcdd", "Rcpp", "shiny"] + "depends": ["Rcpp", "igraph", "rcdd", "shiny"] }, "causalsens": { "name": "causalsens", @@ -46059,9 +46521,9 @@ }, "causalweight": { "name": "causalweight", - "version": "1.1.0", - "sha256": "1i01909zfvrxyjpl1zl58s2y3b27xd1rbi3yhmzqlw9q0yxlbnn8", - "depends": ["checkmate", "e1071", "fastDummies", "glmnet", "grf", "hdm", "LARF", "mvtnorm", "np", "ranger", "SuperLearner", "xgboost"] + "version": "1.1.1", + "sha256": "0412ald8wq2fnam4bb2dc1yrx21vk2c6vbn76lf46c5apb9sw3ij", + "depends": ["LARF", "SuperLearner", "checkmate", "e1071", "fastDummies", "glmnet", "grf", "hdm", "mvtnorm", "np", "ranger", "sandwich", "xgboost"] }, "caviarpd": { "name": "caviarpd", @@ -46071,8 +46533,8 @@ }, "cba": { "name": "cba", - "version": "0.2-24", - "sha256": "0lhx813wpb544p9akaj89hmfx95ka46h6xykxly0dpf7ck00brsh", + "version": "0.2-25", + "sha256": "0a05nfmi9a1gj1r2ms310360wxdw5zgvgb9rc0awf684i5cibjy7", "depends": ["proxy"] }, "cbanalysis": { @@ -46091,7 +46553,7 @@ "name": "cbcTools", "version": "0.5.0", "sha256": "07has80n7n23y2y3shalps1hkw1r8f4fld1r48g42fdrwkhhf6jw", - "depends": ["AlgDesign", "DoE_base", "fastDummies", "ggplot2", "idefix", "logitr", "MASS", "randtoolbox", "rlang"] + "depends": ["AlgDesign", "DoE_base", "MASS", "fastDummies", "ggplot2", "idefix", "logitr", "randtoolbox", "rlang"] }, "cbinom": { "name": "cbinom", @@ -46115,7 +46577,7 @@ "name": "cbq", "version": "0.2.0.3", "sha256": "12ix60mvs4rlh3376m6qcq5zslng1925hrsz5byddfdjx5wilyv7", - "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Formula", "Rcpp", "RcppEigen", "StanHeaders", "rstan", "rstantools"] }, "cbsodataR": { "name": "cbsodataR", @@ -46133,19 +46595,19 @@ "name": "ccTensor", "version": "1.0.2", "sha256": "1r1cqx5kn12xkczpw7f8ij16csnnfy3gjf3kcgr95f070lhd1qna", - "depends": ["fields", "igraph", "MASS", "rTensor"] + "depends": ["MASS", "fields", "igraph", "rTensor"] }, "ccaPP": { "name": "ccaPP", "version": "0.3.3", "sha256": "1p08gih67950khfkzhiksa8qw2f9mrmyqiiapsjpv6zc5g0lchhk", - "depends": ["pcaPP", "Rcpp", "RcppArmadillo", "robustbase"] + "depends": ["Rcpp", "RcppArmadillo", "pcaPP", "robustbase"] }, "cccd": { "name": "cccd", "version": "1.6", "sha256": "0cxh19jqappc6zq9nz3m40ybdmsp12mf7yvflsz96wks3ly2ld4y", - "depends": ["deldir", "FNN", "igraph", "proxy"] + "depends": ["FNN", "deldir", "igraph", "proxy"] }, "cccm": { "name": "cccm", @@ -46167,8 +46629,8 @@ }, "ccdR": { "name": "ccdR", - "version": "1.0.0", - "sha256": "04g8i39p11yyrrgs3lpwj095hnyncdljyz4mxsl9pcql4hwp4v39", + "version": "1.1.0", + "sha256": "1fy6fici3f2p7v0ys2jabahd3phqpf9z0rvrydqdr19srllzspgm", "depends": ["cli", "data_table", "httr", "jsonlite", "purrr", "rlang", "stringr", "tibble", "tidyr", "urltools"] }, "ccda": { @@ -46193,7 +46655,7 @@ "name": "ccid", "version": "1.2.0", "sha256": "0cmkkllcny53dayl74wqhphjznwj7nw7hvaj1fn6mlp6338h3rp8", - "depends": ["gdata", "GeneNet", "hdbinseg", "IDetect"] + "depends": ["GeneNet", "IDetect", "gdata", "hdbinseg"] }, "cclust": { "name": "cclust", @@ -46217,7 +46679,7 @@ "name": "ccml", "version": "1.4.0", "sha256": "1njd8fi5n7zi0a7cadxqqlc7cpmqjqqp42ig6q13n8d7a542dacl", - "depends": ["ConsensusClusterPlus", "diceR", "ggplot2", "plyr", "SNFtool", "tidyr"] + "depends": ["ConsensusClusterPlus", "SNFtool", "diceR", "ggplot2", "plyr", "tidyr"] }, "ccmm": { "name": "ccmm", @@ -46235,13 +46697,13 @@ "name": "ccostr", "version": "0.1.0", "sha256": "0yfmj8v7ip595v87w9dmlzl5rih2j0lsapswh9b9vvc20wnk48ld", - "depends": ["data_table", "dplyr", "forcats", "ggplot2", "knitr", "msm", "Rdpack", "rlang", "survival", "tibble"] + "depends": ["Rdpack", "data_table", "dplyr", "forcats", "ggplot2", "knitr", "msm", "rlang", "survival", "tibble"] }, "ccpsyc": { "name": "ccpsyc", "version": "0.2.6", "sha256": "131ngns5nfkfp0wwf3hl0mhil7n040ss9ppshz4607rrk1ar9isf", - "depends": ["dplyr", "lavaan", "magrittr", "MCMCpack", "psych", "RcppAlgos", "readr", "rlang", "tibble", "tidyr", "ufs", "xlsx"] + "depends": ["MCMCpack", "RcppAlgos", "dplyr", "lavaan", "magrittr", "psych", "readr", "rlang", "tibble", "tidyr", "ufs", "xlsx"] }, "ccrs": { "name": "ccrs", @@ -46253,7 +46715,7 @@ "name": "ccrtm", "version": "0.1.6", "sha256": "1r2jmqb8wwmxr13xgzi5qfig96pclm0nmxm0glvwg0i72hvvqlbv", - "depends": ["expint", "pracma", "Rcpp", "testthat"] + "depends": ["Rcpp", "expint", "pracma", "testthat"] }, "ccss": { "name": "ccss", @@ -46265,7 +46727,7 @@ "name": "cctools", "version": "0.1.2", "sha256": "03lp9pa9qr2hi584ivvmswxmwjw1c3a6xqladpqldjhzvzpxvcwi", - "depends": ["qrng", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "qrng"] }, "cd": { "name": "cd", @@ -46283,13 +46745,13 @@ "name": "cdcatR", "version": "1.0.6", "sha256": "168gs1v1a6pcz63q3hb1dc4mlllr38j91m91phb75np8hxfz2k2v", - "depends": ["cdmTools", "cowplot", "doSNOW", "foreach", "GDINA", "ggplot2", "NPCD"] + "depends": ["GDINA", "NPCD", "cdmTools", "cowplot", "doSNOW", "foreach", "ggplot2"] }, "cdcsis": { "name": "cdcsis", - "version": "2.0.3", - "sha256": "0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9", - "depends": ["ks", "mvtnorm", "Rcpp"] + "version": "2.0.4", + "sha256": "0p3nlp3pqblgw753lrh4xfm3lbx8j9bqwm6gnvdibcsrszzr0zw7", + "depends": ["Rcpp", "ks", "mvtnorm"] }, "cder": { "name": "cder", @@ -46325,7 +46787,7 @@ "name": "cdmTools", "version": "1.0.5", "sha256": "0nd15lr8hdin8qnxykway70irvfi239rm4jx3ck253l7igswiz7s", - "depends": ["combinat", "doSNOW", "foreach", "fungible", "GDINA", "ggplot2", "GPArotation", "psych", "sirt"] + "depends": ["GDINA", "GPArotation", "combinat", "doSNOW", "foreach", "fungible", "ggplot2", "psych", "sirt"] }, "cdom": { "name": "cdom", @@ -46349,13 +46811,13 @@ "name": "cds", "version": "1.0.3", "sha256": "1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05", - "depends": ["clue", "colorspace", "copula", "limSolve", "MASS"] + "depends": ["MASS", "clue", "colorspace", "copula", "limSolve"] }, "ceRtainty": { "name": "ceRtainty", "version": "1.0.0", "sha256": "01wgvjpxqwhgh6vx9vbmiv4d88bps790l6ij3gw5w69hbrrd9ixi", - "depends": ["dplyr", "RColorBrewer", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "tidyr"] }, "ceas": { "name": "ceas", @@ -46367,13 +46829,13 @@ "name": "ceg", "version": "0.1.0", "sha256": "01la7kv0a3inc9vy5x010ysicfiv404bqfgs8csvqixviap9rd74", - "depends": ["graph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph"] }, "celestial": { "name": "celestial", "version": "1.4.6", "sha256": "1gls0qvr8mxz79lsmk76v253f747g0cqys8p8wjmpijs8r0pyr4z", - "depends": ["NISTunits", "pracma", "RANN"] + "depends": ["NISTunits", "RANN", "pracma"] }, "cellKey": { "name": "cellKey", @@ -46397,13 +46859,13 @@ "name": "cellWise", "version": "2.5.3", "sha256": "0asimy253lxm9yf47pynhxc7sfd3v5rkvnyf1sby7s4qkz06bh49", - "depends": ["ggplot2", "gridExtra", "matrixStats", "Rcpp", "RcppArmadillo", "reshape2", "robustbase", "rrcov", "scales", "shape", "svd"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra", "matrixStats", "reshape2", "robustbase", "rrcov", "scales", "shape", "svd"] }, "cellpypes": { "name": "cellpypes", "version": "0.3.0", "sha256": "1px7p1xly71p48w72m5fcs2krxba72slnh638wpd98a52clbgz6l", - "depends": ["cowplot", "dplyr", "ggplot2", "Matrix", "rlang", "scales", "scattermore", "scUtils", "viridis"] + "depends": ["Matrix", "cowplot", "dplyr", "ggplot2", "rlang", "scUtils", "scales", "scattermore", "viridis"] }, "cellranger": { "name": "cellranger", @@ -46421,13 +46883,13 @@ "name": "cem", "version": "1.1.31", "sha256": "1ylzsx2km9lf3x1rchwgs3nd8dzrac81f2jnd4qri35zvlilh1c6", - "depends": ["combinat", "lattice", "MatchIt", "nlme", "randomForest"] + "depends": ["MatchIt", "combinat", "lattice", "nlme", "randomForest"] }, "cemco": { "name": "cemco", "version": "0.2", "sha256": "172raa62i34d1vzsgy84h3b7mmdzvg9h657fcmgrlhlkwqzx0gyl", - "depends": ["doParallel", "foreach", "MASS", "mclust", "mvtnorm", "nnet", "rootSolve"] + "depends": ["MASS", "doParallel", "foreach", "mclust", "mvtnorm", "nnet", "rootSolve"] }, "cenGAM": { "name": "cenGAM", @@ -46439,7 +46901,7 @@ "name": "cenROC", "version": "2.0.0", "sha256": "1rgs1h32jm7ls830f62gi5wdaqx3q2h4m4qirxqmv0pi8y5y2a9v", - "depends": ["condSURV", "icenReg", "Rcpp", "RcppEigen", "survival"] + "depends": ["Rcpp", "RcppEigen", "condSURV", "icenReg", "survival"] }, "cencrne": { "name": "cencrne", @@ -46469,7 +46931,7 @@ "name": "censo2017", "version": "0.6.2", "sha256": "0rj3a9i6faqsrx641p1nacdprfnzp8q45khpdrakmfnc7l40xh87", - "depends": ["cli", "crayon", "DBI", "duckdb", "httr", "purrr", "rstudioapi", "tibble"] + "depends": ["DBI", "cli", "crayon", "duckdb", "httr", "purrr", "rstudioapi", "tibble"] }, "censobr": { "name": "censobr", @@ -46505,7 +46967,13 @@ "name": "centiserve", "version": "1.0.0", "sha256": "1m6gqz2rk7023340laa5pc0ncbfka2qi9ajvh65fwijd7xvv3n5c", - "depends": ["igraph", "Matrix"] + "depends": ["Matrix", "igraph"] + }, + "centr": { + "name": "centr", + "version": "0.1.0", + "sha256": "12kf4j75q6jyyypa3cqj5pn9gn7z2nj0mp35j9dqq42qn6mwpgv7", + "depends": ["sf"] }, "centrifugeR": { "name": "centrifugeR", @@ -46611,8 +47079,8 @@ }, "cffr": { "name": "cffr", - "version": "1.0.1", - "sha256": "1h8kk2zjp5c86a2r64ad88zs1w80gc5x8dlr4a16h9w6r98zjxpd", + "version": "1.1.1", + "sha256": "1aja12kn1f6h3zydfichiq2l2qd0qd7fl794v6ypp433hh54yvxg", "depends": ["cli", "desc", "jsonlite", "jsonvalidate", "yaml"] }, "cfid": { @@ -46655,7 +47123,7 @@ "name": "cg", "version": "1.0-3", "sha256": "1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3", - "depends": ["Hmisc", "lattice", "MASS", "multcomp", "nlme", "rms", "survival", "VGAM"] + "depends": ["Hmisc", "MASS", "VGAM", "lattice", "multcomp", "nlme", "rms", "survival"] }, "cgAUC": { "name": "cgAUC", @@ -46667,7 +47135,7 @@ "name": "cgaim", "version": "1.0.1", "sha256": "1krs61rbnz7v4pncbjlil4728x5xyz5vzbyj487njbmqgymq10wl", - "depends": ["cgam", "coneproj", "doParallel", "foreach", "gratia", "limSolve", "MASS", "Matrix", "mgcv", "osqp", "quadprog", "scam", "scar", "TruncatedNormal"] + "depends": ["MASS", "Matrix", "TruncatedNormal", "cgam", "coneproj", "doParallel", "foreach", "gratia", "limSolve", "mgcv", "osqp", "quadprog", "scam", "scar"] }, "cgal4h": { "name": "cgal4h", @@ -46679,25 +47147,25 @@ "name": "cgam", "version": "1.21", "sha256": "0dsiwam9fgvri14hznnplxcjj0f8ibi8vf64wryq3pcvi41di082", - "depends": ["coneproj", "lme4", "Matrix", "statmod", "svDialogs"] + "depends": ["Matrix", "coneproj", "lme4", "statmod", "svDialogs"] }, "cglasso": { "name": "cglasso", "version": "2.0.7", "sha256": "18j50f6ghk7vjr3xfw8j1nh42l6rm8kd5c6jcvll2rjbvq5vn571", - "depends": ["igraph", "MASS"] + "depends": ["MASS", "igraph"] }, "cglm": { "name": "cglm", "version": "1.1", "sha256": "1r3wrds5lbirzzqsi12prwykxa5361jb95pq7j95nlp6y8kcb94j", - "depends": ["data_table", "nleqslv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "nleqslv"] }, "cgmanalysis": { "name": "cgmanalysis", "version": "2.7.7", "sha256": "19kvxbg4vs7bfs3y1bfvhklwr22kba46aiwsns58g7h9b88m4kw7", - "depends": ["ggplot2", "lubridate", "parsedate", "pastecs", "pracma", "readr", "readxl", "XML", "zoo"] + "depends": ["XML", "ggplot2", "lubridate", "parsedate", "pastecs", "pracma", "readr", "readxl", "zoo"] }, "cgmquantify": { "name": "cgmquantify", @@ -46715,7 +47183,7 @@ "name": "ch", "version": "0.1.0.2", "sha256": "1ryh2xr1ix4qznq1svi4gdr4qy6v6rg597z2zl6zw32s2xq6ssx6", - "depends": ["clipr", "crayon", "ggplot2", "magrittr", "MASS", "polynom", "pracma", "Ryacas"] + "depends": ["MASS", "Ryacas", "clipr", "crayon", "ggplot2", "magrittr", "polynom", "pracma"] }, "chainbinomial": { "name": "chainbinomial", @@ -46735,12 +47203,6 @@ "sha256": "03qcqw9xx8mw7hymjl3ym6l1adgw5ssv0pmcmdv2hk230mx2fsld", "depends": ["numDeriv"] }, - "changeRangeR": { - "name": "changeRangeR", - "version": "1.1.0", - "sha256": "0y13wwz62wsh29flb7v094gb47gd6xwjq6fvmkzmlhz8x71f5g1v", - "depends": ["dplyr", "phylobase", "rangeModelMetadata", "raster", "sf", "sp"] - }, "changeS": { "name": "changeS", "version": "1.0.1", @@ -46757,7 +47219,7 @@ "name": "changepoint.geo", "version": "1.0.2", "sha256": "0zwj4wwwh99diz0vn5f06ygs93afahnn5glvab2k7wgk2qyf5jgq", - "depends": ["changepoint", "changepoint_np", "ggplot2", "Rdpack"] + "depends": ["Rdpack", "changepoint", "changepoint_np", "ggplot2"] }, "changepoint_influence": { "name": "changepoint.influence", @@ -46769,7 +47231,7 @@ "name": "changepoint.np", "version": "1.0.5", "sha256": "1kyj1z0mmbk1i71d5xxw8h3468afvwlqma659yjck3y5dszb1vn9", - "depends": ["changepoint", "Rdpack", "zoo"] + "depends": ["Rdpack", "changepoint", "zoo"] }, "changepointTests": { "name": "changepointTests", @@ -46781,13 +47243,13 @@ "name": "changepoints", "version": "1.1.0", "sha256": "1wckqnwvjl56ajz09niiyb4v61gnh1xzasdkxj8hsnfmv24y7dvk", - "depends": ["data_tree", "gglasso", "glmnet", "ks", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "data_tree", "gglasso", "glmnet", "ks"] }, "changepointsVar": { "name": "changepointsVar", "version": "0.1.1", "sha256": "0a5g0bafvb1rbw31y8b8plwhxw5svlh4qfjwvdzafbcrp3rn1cs4", - "depends": ["lars", "MASS"] + "depends": ["MASS", "lars"] }, "changer": { "name": "changer", @@ -46807,6 +47269,12 @@ "sha256": "1f83yrvc0qnxlvcpl41718vv3c26x131q285c1mgys1xwk3s97s7", "depends": ["R6", "tibble", "whisker"] }, + "charlesschwabapi": { + "name": "charlesschwabapi", + "version": "1.0.2", + "sha256": "0pmf25d6vvfyxxwh7g29iwd5di3b82vw128n15amakxfjibb8rjs", + "depends": ["anytime", "dplyr", "httr", "lubridate", "openssl", "purrr", "stringr", "tidyr"] + }, "chartql": { "name": "chartql", "version": "0.1.0", @@ -46827,14 +47295,14 @@ }, "chattr": { "name": "chattr", - "version": "0.1.0", - "sha256": "0sgaanmvnmcqn57ks7xdc3bvdzifrkqkz6bpjq8978jrpysxm2cw", + "version": "0.2.0", + "sha256": "1jvzk62h5dgshqadin3n55600yy965xgssb6akywixyik8qipscl", "depends": ["bslib", "callr", "cli", "clipr", "config", "fs", "glue", "httr2", "jsonlite", "lifecycle", "processx", "purrr", "rlang", "rstudioapi", "shiny", "yaml"] }, "cheapr": { "name": "cheapr", - "version": "0.9.2", - "sha256": "06slf0b5qv8ypmcyw6r7ip3sgx6x44bvwy0zgfwhm8kawkjxir24", + "version": "0.9.3", + "sha256": "1zf9jnwcvpw9zlh7dyrmw4wwjc3fxll0q3mkivd5q5vikmzvy0y7", "depends": ["collapse", "cpp11"] }, "cheatsheet": { @@ -46861,6 +47329,12 @@ "sha256": "0yn7casmsqcrc31b9g06sjdrwxjyw5cbg3pwwdn5s7gaal881rh1", "depends": ["glue", "htmltools", "markdown"] }, + "checked": { + "name": "checked", + "version": "0.2.0", + "sha256": "0yzg8y236w72694raz0x7ic70a0fzn9c3pl2x868rfyvq3ivsv7d", + "depends": ["R6", "callr", "cli", "igraph", "jsonlite", "rcmdcheck"] + }, "checker": { "name": "checker", "version": "0.1.3", @@ -46881,8 +47355,8 @@ }, "checkmate": { "name": "checkmate", - "version": "2.3.1", - "sha256": "1xl4313kav3fy32ff9mdlm03za1mrwlym6d5abrkf0a0r86bmrp7", + "version": "2.3.2", + "sha256": "1qw81bs3lhwr1m6wlbs0l0j669051n60x4ca2821599ddhnp6mbj", "depends": ["backports"] }, "checkpoint": { @@ -46899,15 +47373,15 @@ }, "cheddar": { "name": "cheddar", - "version": "0.1-638", - "sha256": "0y1kmm14f7fkxxyjvxiavzcy2bfflwp98yx7z98ib0v7dnn86vmx", + "version": "0.1-639", + "sha256": "0fiq03irgi1niqlc45vkqvn8dlqg6354i6f4gv70pzjn6l74a7nf", "depends": [] }, "cheem": { "name": "cheem", "version": "0.4.0.0", "sha256": "1b6gf2ax30rhpkmawvpar4cria4gkrcrzgyrvlrhcaialx40sjlz", - "depends": ["conflicted", "DT", "ggplot2", "magrittr", "plotly", "shiny", "shinycssloaders", "shinythemes", "spinifex"] + "depends": ["DT", "conflicted", "ggplot2", "magrittr", "plotly", "shiny", "shinycssloaders", "shinythemes", "spinifex"] }, "cheese": { "name": "cheese", @@ -46923,9 +47397,9 @@ }, "chem16S": { "name": "chem16S", - "version": "1.0.0", - "sha256": "0a4r1sca2fsadaz3bmkrkylbdabwjw2ja6p9s9hgkgg4k6h3vslr", - "depends": ["ggplot2", "phyloseq", "plyr", "reshape2", "rlang"] + "version": "1.1.0", + "sha256": "0jjxirnjg966rbjv1lv889xpzjlspp0a3d41f90x8hqys6bbkln7", + "depends": ["canprot", "ggplot2", "phyloseq", "plyr", "reshape2", "rlang"] }, "chemCal": { "name": "chemCal", @@ -46935,21 +47409,21 @@ }, "chemdeg": { "name": "chemdeg", - "version": "0.1.2", - "sha256": "0ipj7988bwrcz489wa5mx789aw9dij6003rbdndbl3m2r3hi9pnv", + "version": "0.1.4", + "sha256": "092d3nfkhgwy1wg5aqp6p1kd36q2s82vw6ymz0h10rqxsj84mx3f", "depends": ["MASS"] }, "chemodiv": { "name": "chemodiv", "version": "0.3.0", "sha256": "07y8wvi5vh5apvg57pd2q5rqvpxm0h3v899n12r76gwvj8z1a28s", - "depends": ["ape", "ChemmineR", "curl", "fmcsR", "ggdendro", "ggplot2", "ggraph", "gridExtra", "GUniFrac", "hillR", "httr", "igraph", "jsonlite", "rlang", "tidygraph", "tidyr", "vegan", "webchem"] + "depends": ["ChemmineR", "GUniFrac", "ape", "curl", "fmcsR", "ggdendro", "ggplot2", "ggraph", "gridExtra", "hillR", "httr", "igraph", "jsonlite", "rlang", "tidygraph", "tidyr", "vegan", "webchem"] }, "chemometrics": { "name": "chemometrics", "version": "1.4.4", "sha256": "10d8g8sgck6v2cgkv988yiawv9vrziyqsrhagmkzf7rjpqgdn3px", - "depends": ["class", "e1071", "lars", "MASS", "mclust", "nnet", "pcaPP", "pls", "robustbase", "rpart", "som"] + "depends": ["MASS", "class", "e1071", "lars", "mclust", "nnet", "pcaPP", "pls", "robustbase", "rpart", "som"] }, "cherry": { "name": "cherry", @@ -46979,7 +47453,7 @@ "name": "chest", "version": "0.3.7", "sha256": "0905xl1vqn8icvf44vydhd00wvz5cdnl2igr7m0jmrsv564zdj5a", - "depends": ["broom", "dplyr", "forestplot", "ggplot2", "MASS", "survival", "tibble"] + "depends": ["MASS", "broom", "dplyr", "forestplot", "ggplot2", "survival", "tibble"] }, "chevron": { "name": "chevron", @@ -46997,7 +47471,7 @@ "name": "chicane", "version": "0.1.8", "sha256": "0963r5jzyjihidh18ny9nqkim00bys3psdgrxhbah43bbl0kx43r", - "depends": ["bedr", "data_table", "doParallel", "foreach", "gamlss", "gamlss_tr", "iterators", "knitr", "MASS", "rmarkdown"] + "depends": ["MASS", "bedr", "data_table", "doParallel", "foreach", "gamlss", "gamlss_tr", "iterators", "knitr", "rmarkdown"] }, "childdevdata": { "name": "childdevdata", @@ -47009,19 +47483,19 @@ "name": "childesr", "version": "0.2.3", "sha256": "1a58s0zph4mfmh9sdfbv7yaa20lx5gi0mca0ikzarfwxjl5knp39", - "depends": ["DBI", "dbplyr", "dplyr", "jsonlite", "magrittr", "purrr", "RMySQL"] + "depends": ["DBI", "RMySQL", "dbplyr", "dplyr", "jsonlite", "magrittr", "purrr"] }, "childfree": { "name": "childfree", - "version": "0.0.1", - "sha256": "0p1b1bi6shkg2lzl0q07al80sc5gw3yrz3cj8sp5rfpnrfa12ard", + "version": "0.0.2", + "sha256": "1hss91cls38zj4dibcr9whjlmbs4w2b7xfpgfqkkd6xa6xmcxd6v", "depends": ["rio"] }, "childsds": { "name": "childsds", "version": "0.8.0", "sha256": "1vv02kbw17b8zva2yc1qgi750z9yhyfv5xbig29dhyzvj8k00yvb", - "depends": ["boot", "class", "dplyr", "gamlss", "gamlss_dist", "magrittr", "purrr", "purrrlyr", "reshape2", "tibble", "tidyr", "VGAM"] + "depends": ["VGAM", "boot", "class", "dplyr", "gamlss", "gamlss_dist", "magrittr", "purrr", "purrrlyr", "reshape2", "tibble", "tidyr"] }, "chilemapas": { "name": "chilemapas", @@ -47033,19 +47507,19 @@ "name": "chillR", "version": "0.75", "sha256": "0b8r8s7vqgpb6jjbqaf24yig2adagfl6rnnppx15mdhz8bmjc5aq", - "depends": ["assertthat", "dplyr", "ecmwfr", "fields", "GenSA", "ggplot2", "httr", "jsonlite", "Kendall", "lubridate", "magrittr", "metR", "patchwork", "pls", "plyr", "progress", "purrr", "R_utils", "raster", "Rcpp", "RCurl", "readxl", "reshape2", "rlang", "RMAWGEN", "scales", "stringr", "tidyr", "XML"] + "depends": ["GenSA", "Kendall", "RCurl", "RMAWGEN", "R_utils", "Rcpp", "XML", "assertthat", "dplyr", "ecmwfr", "fields", "ggplot2", "httr", "jsonlite", "lubridate", "magrittr", "metR", "patchwork", "pls", "plyr", "progress", "purrr", "raster", "readxl", "reshape2", "rlang", "scales", "stringr", "tidyr"] }, "chinese_misc": { "name": "chinese.misc", "version": "0.2.3", "sha256": "0hlna52g00nh3908wgpb9ldgghff3gfjx24vmk5gikkazdqk9zrh", - "depends": ["jiebaR", "Matrix", "NLP", "purrr", "slam", "stringi", "tm"] + "depends": ["Matrix", "NLP", "jiebaR", "purrr", "slam", "stringi", "tm"] }, "chipPCR": { "name": "chipPCR", "version": "1.0-2", "sha256": "0q30ncnvbipvqbpxrx2yb68i2ybdfl1fbzj3f12dd2wmjjl72q1x", - "depends": ["lmtest", "MASS", "outliers", "ptw", "quantreg", "Rfit", "robustbase", "shiny", "signal"] + "depends": ["MASS", "Rfit", "lmtest", "outliers", "ptw", "quantreg", "robustbase", "shiny", "signal"] }, "chirps": { "name": "chirps", @@ -47061,21 +47535,21 @@ }, "chisquare": { "name": "chisquare", - "version": "0.9", - "sha256": "11pypv6nmqqwrjvrzakn8x4ap0jw23dk3ij4i2kxx340j0gqk8qh", + "version": "1.0", + "sha256": "1vjhsi520p9m46xay9dh0la5ypyhi19gyg5i568d2ywka4g2ssac", "depends": ["gt"] }, "chk": { "name": "chk", - "version": "0.9.1", - "sha256": "19q5ylkgrkdmnzg2df1lnrp2arbfzwfz4rbrr16j9ih2237kvd7r", + "version": "0.9.2", + "sha256": "0f6ilq9pbb6mgvclp6ksbaw8353wf114p1xqhlmkwgsfh2bg63xg", "depends": ["lifecycle", "rlang"] }, "chkptstanr": { "name": "chkptstanr", "version": "0.1.1", "sha256": "0p0pzpzyg3sw4gnvzdx34f96yxidpykq49v5xlhnrsnpjzajjfs3", - "depends": ["abind", "brms", "Rdpack", "rstan"] + "depends": ["Rdpack", "abind", "brms", "rstan"] }, "chlorpromazineR": { "name": "chlorpromazineR", @@ -47087,7 +47561,7 @@ "name": "chngpt", "version": "2023.11-29", "sha256": "1zz0wgard6a1y36r78pfp5gqfjm12xlvh5cmdq3297m4d7jvrn34", - "depends": ["boot", "kyotil", "lme4", "MASS", "RhpcBLASctl", "survival"] + "depends": ["MASS", "RhpcBLASctl", "boot", "kyotil", "lme4", "survival"] }, "choiceDes": { "name": "choiceDes", @@ -47099,7 +47573,7 @@ "name": "cholera", "version": "0.8.0", "sha256": "0qfy7xqkihn8jfxnhg0l5y0mii52lbfwmg663bqsjapylqc9bjcd", - "depends": ["deldir", "elevatr", "geosphere", "ggplot2", "HistData", "igraph", "KernSmooth", "pracma", "RColorBrewer", "sp", "tanaka", "terra", "threejs", "TSP", "viridisLite"] + "depends": ["HistData", "KernSmooth", "RColorBrewer", "TSP", "deldir", "elevatr", "geosphere", "ggplot2", "igraph", "pracma", "sp", "tanaka", "terra", "threejs", "viridisLite"] }, "choosepc": { "name": "choosepc", @@ -47129,7 +47603,7 @@ "name": "choroplethr", "version": "3.7.3", "sha256": "053zs3bxr38izdkm1mhwqnrg7j5mb1dwjdx0dvsbv9l3nrb39par", - "depends": ["acs", "dplyr", "ggmap", "ggplot2", "gridExtra", "Hmisc", "R6", "RgoogleMaps", "rvest", "stringr", "tidycensus", "tidyr", "tigris", "WDI", "xml2"] + "depends": ["Hmisc", "R6", "RgoogleMaps", "WDI", "acs", "dplyr", "ggmap", "ggplot2", "gridExtra", "rvest", "stringr", "tidycensus", "tidyr", "tigris", "xml2"] }, "choroplethrAdmin1": { "name": "choroplethrAdmin1", @@ -47147,7 +47621,7 @@ "name": "chouca", "version": "0.1.99", "sha256": "1gnilv8ww106mz5wnry826gysgsaq7mvd83ms0j5jhkkqmsqy2dd", - "depends": ["digest", "plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "digest", "plyr"] }, "christmas": { "name": "christmas", @@ -47177,7 +47651,7 @@ "name": "chromote", "version": "0.2.0", "sha256": "0x888796760gglxqzd0i5mqim3j878dkyip64m26irprl9ksyxm3", - "depends": ["curl", "fastmap", "jsonlite", "later", "magrittr", "processx", "promises", "R6", "rlang", "websocket"] + "depends": ["R6", "curl", "fastmap", "jsonlite", "later", "magrittr", "processx", "promises", "rlang", "websocket"] }, "chromseq": { "name": "chromseq", @@ -47195,7 +47669,7 @@ "name": "chronicle", "version": "0.3", "sha256": "0yfrxr93fbxgpxjs1gb56pdx1kk4nn9xvy2csgl1rhzrgbl343m3", - "depends": ["data_table", "dplyr", "DT", "dygraphs", "ggplot2", "glue", "knitr", "magrittr", "plotly", "prettydoc", "purrr", "readr", "rlang", "rmarkdown", "rmdformats", "scales", "skimr", "viridis", "zoo"] + "depends": ["DT", "data_table", "dplyr", "dygraphs", "ggplot2", "glue", "knitr", "magrittr", "plotly", "prettydoc", "purrr", "readr", "rlang", "rmarkdown", "rmdformats", "scales", "skimr", "viridis", "zoo"] }, "chronicler": { "name": "chronicler", @@ -47225,7 +47699,7 @@ "name": "chunked", "version": "0.6.0", "sha256": "1j16am4nzwy2ckisksl5mk8h05ala6lpdd5qrb1gwyrhli4lx45a", - "depends": ["DBI", "dplyr", "LaF", "progress", "rlang"] + "depends": ["DBI", "LaF", "dplyr", "progress", "rlang"] }, "chunkhooks": { "name": "chunkhooks", @@ -47249,7 +47723,7 @@ "name": "ciTools", "version": "0.6.1", "sha256": "0d6aq4wcxi1q59g4kfx49x1li41rfwx2z2v4xzz2xkldn6h1794z", - "depends": ["arm", "boot", "dplyr", "lme4", "MASS", "survival"] + "depends": ["MASS", "arm", "boot", "dplyr", "lme4", "survival"] }, "ciccr": { "name": "ciccr", @@ -47261,7 +47735,7 @@ "name": "cicerone", "version": "1.0.4", "sha256": "1z3i720970kmczg01wxwbyqwd9zby69lchw3pgqwpn2bjr66jimh", - "depends": ["assertthat", "R6", "shiny"] + "depends": ["R6", "assertthat", "shiny"] }, "cif": { "name": "cif", @@ -47273,13 +47747,13 @@ "name": "cifti", "version": "0.4.5", "sha256": "092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9", - "depends": ["gifti", "oro_nifti", "R_utils", "xml2"] + "depends": ["R_utils", "gifti", "oro_nifti", "xml2"] }, "ciftiTools": { "name": "ciftiTools", - "version": "0.14.0", - "sha256": "0any2442p9jmlzmhh5blclp7w07ff1m266sbjqx5yjw92hvxc311", - "depends": ["fields", "gifti", "oro_nifti", "RColorBrewer", "rgl", "RNifti", "viridisLite", "xml2"] + "version": "0.15.1", + "sha256": "0wf2yqpdccriww942lyic13rsxylx4zcl670gyd81d41lj0xf5rc", + "depends": ["RColorBrewer", "RNifti", "fields", "gifti", "oro_nifti", "rgl", "viridisLite", "xml2"] }, "cimir": { "name": "cimir", @@ -47291,7 +47765,7 @@ "name": "cinaR", "version": "0.2.3", "sha256": "0kdf3xbhg7yhpr67fqbbwqm16fvv3dj9f7bvfqliy3xhpxpg23qi", - "depends": ["ChIPseeker", "DESeq2", "dplyr", "edgeR", "fgsea", "GenomicRanges", "ggplot2", "ggrepel", "limma", "pheatmap", "preprocessCore", "RColorBrewer", "sva", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "writexl"] + "depends": ["ChIPseeker", "DESeq2", "GenomicRanges", "RColorBrewer", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "TxDb_Mmusculus_UCSC_mm10_knownGene", "dplyr", "edgeR", "fgsea", "ggplot2", "ggrepel", "limma", "pheatmap", "preprocessCore", "sva", "writexl"] }, "cinaRgenesets": { "name": "cinaRgenesets", @@ -47323,11 +47797,17 @@ "sha256": "1j4zaivkxkd3kv7cgy17xwn4mrwx7mhhxf48ziz4bk5z0zykrb5w", "depends": ["ggplot2", "withr"] }, + "circhelp": { + "name": "circhelp", + "version": "1.1", + "sha256": "1w8m4dawq6hd9pjgmqydhf4c3f7gllzlwmxmbxirg61psk38x4wk", + "depends": ["MASS", "data_table", "gamlss", "ggplot2", "mathjaxr", "patchwork"] + }, "circle": { "name": "circle", - "version": "0.7.2", - "sha256": "0nn14ky8df8ra03sh9ds7lkcksf9lysc1981dh19pca7iqbdydkx", - "depends": ["cli", "httr", "jsonlite"] + "version": "0.7.3", + "sha256": "1179gh3psicj5pcaqdhn4cfvj9dwwflwk0jz3lwd9yvgmbhcp2zs", + "depends": ["cli", "gh", "httr", "jsonlite"] }, "circlesplot": { "name": "circlesplot", @@ -47345,7 +47825,7 @@ "name": "circlize", "version": "0.4.16", "sha256": "0rqbcmmp4h1jjl0y59bzn6k8kywjdqwvp0ajkqxd21j9f33k5p0n", - "depends": ["colorspace", "GlobalOptions", "shape"] + "depends": ["GlobalOptions", "colorspace", "shape"] }, "circular": { "name": "circular", @@ -47357,18 +47837,18 @@ "name": "circularEV", "version": "0.1.1", "sha256": "0g499mn8knkfspk3wdgn8r9v4hpr6gy8wjwf0zrgf0j05xap6g7a", - "depends": ["circular", "doParallel", "foreach", "ggplot2", "mgcv", "NPCirc"] + "depends": ["NPCirc", "circular", "doParallel", "foreach", "ggplot2", "mgcv"] }, "circumplex": { "name": "circumplex", "version": "0.3.10", "sha256": "1g0r004c7y51mcv7iiymgzhdy9v8y9bk814bzaam4d8fxp7qzqlr", - "depends": ["assertthat", "boot", "dplyr", "ggforce", "ggplot2", "htmlTable", "magrittr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "scales", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "assertthat", "boot", "dplyr", "ggforce", "ggplot2", "htmlTable", "magrittr", "purrr", "rlang", "scales", "tibble", "tidyr"] }, "cit": { "name": "cit", - "version": "2.3.1", - "sha256": "1i1179d0rjnmrlwh031dxmvwp2w6k1c9fj5g3cfmzjk4xxb2bjha", + "version": "2.3.2", + "sha256": "0dipl9d96f59zdc5bpw5xpls78mm614ljz95k898q35qzsz8g5lf", "depends": [] }, "citation": { @@ -47381,7 +47861,7 @@ "name": "citationchaser", "version": "0.0.4", "sha256": "11ilh8fpqvljzriwwkzmw5idxff82spyv4b36lsl1s0lfbgjis69", - "depends": ["data_table", "dplyr", "httr", "jsonlite", "maditr", "MESS", "networkD3", "scales", "tibble"] + "depends": ["MESS", "data_table", "dplyr", "httr", "jsonlite", "maditr", "networkD3", "scales", "tibble"] }, "citecorp": { "name": "citecorp", @@ -47411,19 +47891,25 @@ "name": "citrus", "version": "1.0.2", "sha256": "1pzzyppqfh3qvc1xi2947lnshv7z2c21r8fribhc1avj76j26q5y", - "depends": ["clustMixType", "dplyr", "GGally", "ggplot2", "RColorBrewer", "rlang", "rpart", "rpart_plot", "stringr", "tibble", "treeClust"] + "depends": ["GGally", "RColorBrewer", "clustMixType", "dplyr", "ggplot2", "rlang", "rpart", "rpart_plot", "stringr", "tibble", "treeClust"] }, "ciu": { "name": "ciu", "version": "0.6.0", "sha256": "0pqs8ivbybbrjar978bl05awgaks33nqfm7l9z68iv2sj4a9hv21", - "depends": ["crayon", "ggplot2", "Rcpp"] + "depends": ["Rcpp", "crayon", "ggplot2"] + }, + "ciuupi": { + "name": "ciuupi", + "version": "1.2.3", + "sha256": "0nxci8x9v78l4plcd6p1b827xjd40ncda9cqqhawfm059z8j73n8", + "depends": ["functional", "nloptr", "pracma", "statmod"] }, "ciuupi2": { "name": "ciuupi2", "version": "1.0.1", "sha256": "04x02qmqqyrc4h4z4mpl4zn5vr9y28k6j6n30fbr9q238zd543db", - "depends": ["functional", "nloptr", "pracma", "PreciseSums", "statmod"] + "depends": ["PreciseSums", "functional", "nloptr", "pracma", "statmod"] }, "civ": { "name": "civ", @@ -47441,31 +47927,31 @@ "name": "ciw", "version": "0.0.2", "sha256": "1znn3prdyw3jdamjk3d7b4f0z4bj1i5d08zl8vp9qzdmf46msnh1", - "depends": ["curl", "data_table", "XML"] + "depends": ["XML", "curl", "data_table"] }, "cjar": { "name": "cjar", "version": "0.1.2", "sha256": "0rq9ryhp2h3p927227chzwbjn7x22h9ckkha2kclhx0jh7swf5y7", - "depends": ["assertthat", "dplyr", "glue", "httr", "jose", "jsonlite", "lubridate", "magrittr", "memoise", "openssl", "progress", "purrr", "R6", "rlang", "stringr", "tibble", "tidyr", "vctrs"] + "depends": ["R6", "assertthat", "dplyr", "glue", "httr", "jose", "jsonlite", "lubridate", "magrittr", "memoise", "openssl", "progress", "purrr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] }, "cjbart": { "name": "cjbart", "version": "0.3.2", "sha256": "1d6jg6m86i2vx1yq66flj22x061s2x8rxsasqnn688kaaqrya657", - "depends": ["BART", "ggplot2", "randomForestSRC", "Rdpack", "rlang", "tidyr"] + "depends": ["BART", "Rdpack", "ggplot2", "randomForestSRC", "rlang", "tidyr"] }, "cjoint": { "name": "cjoint", "version": "2.1.1", "sha256": "1byahl2x3mdz66cicyjbi5qrcbq9xqcyyny5rzxkg5m5nfgxprqk", - "depends": ["DT", "ggplot2", "lmtest", "Matrix", "sandwich", "shiny", "shinyjs", "survey"] + "depends": ["DT", "Matrix", "ggplot2", "lmtest", "sandwich", "shiny", "shinyjs", "survey"] }, "ckanr": { "name": "ckanr", "version": "0.7.0", "sha256": "10bxlvx70wik3rih5ms8jb9nb111qca4ydz8rj2raywm8bd3rpcj", - "depends": ["crul", "DBI", "dbplyr", "dplyr", "jsonlite", "magrittr"] + "depends": ["DBI", "crul", "dbplyr", "dplyr", "jsonlite", "magrittr"] }, "clValid": { "name": "clValid", @@ -47485,10 +47971,16 @@ "sha256": "16yq457a2c8d47szimad7rx0q31h0g7iirmb75xxjicvkxqprmaz", "depends": ["rintcal"] }, + "clap": { + "name": "clap", + "version": "0.1.0", + "sha256": "1mc2aqvf4l4dp39if2m60vn01nww3pikpsmw2m42iw5rzzxgswpq", + "depends": ["FNN", "dplyr", "mclust", "rlang"] + }, "clarabel": { "name": "clarabel", - "version": "0.5.1", - "sha256": "12kds0pwvs2wrv23pjs6bbh49gymak7as46qjz65is4ssd12fbs8", + "version": "0.9.0", + "sha256": "1g66y8s4v7qzm92dhnsmng28sm4lf6wggb4kc6arvp75z0i315jh", "depends": [] }, "clarifai": { @@ -47519,19 +48011,19 @@ "name": "classGraph", "version": "0.7-6", "sha256": "10nyrs5xh70ajhi1q6pvx4s5lkl2r46ddxanhiyn9vv9swr2hzsw", - "depends": ["graph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph"] }, "classInt": { "name": "classInt", "version": "0.4-10", "sha256": "12rbwh7g0a6abvy423xjiv53gx1f9lg4y78r80lc0fj9pjpiwmn3", - "depends": ["class", "e1071", "KernSmooth"] + "depends": ["KernSmooth", "class", "e1071"] }, "classifierplots": { "name": "classifierplots", "version": "1.4.0", "sha256": "0agxm3vrbs8lqhk1xvfc3wzf0q0hxhgyp23j5qi5mi1drgnw1jj1", - "depends": ["caret", "data_table", "ggplot2", "gridExtra", "png", "Rcpp", "ROCR"] + "depends": ["ROCR", "Rcpp", "caret", "data_table", "ggplot2", "gridExtra", "png"] }, "classifly": { "name": "classifly", @@ -47585,7 +48077,7 @@ "name": "cleanTS", "version": "0.1.2", "sha256": "04k84989a0jvdd015yrd6wqnfk19yq0a4qpdnm3l0137h7s2xq8k", - "depends": ["data_table", "gganimate", "ggplot2", "ggtext", "glue", "imputeTestbench", "imputeTS", "lubridate", "shiny", "stringr", "tibble", "transformr"] + "depends": ["data_table", "gganimate", "ggplot2", "ggtext", "glue", "imputeTS", "imputeTestbench", "lubridate", "shiny", "stringr", "tibble", "transformr"] }, "cleancall": { "name": "cleancall", @@ -47599,6 +48091,12 @@ "sha256": "1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk", "depends": [] }, + "cleanepi": { + "name": "cleanepi", + "version": "1.0.2", + "sha256": "10vpdynil63gnx9rdzzdcaprn6639qgc415wg615izykz7c0g42l", + "depends": ["arsenal", "checkmate", "dplyr", "janitor", "linelist", "lubridate", "magrittr", "matchmaker", "numberize", "readr", "rlang", "snakecase", "withr"] + }, "cleaner": { "name": "cleaner", "version": "1.5.4", @@ -47627,7 +48125,7 @@ "name": "clespr", "version": "1.1.2", "sha256": "1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g", - "depends": ["AER", "clordr", "doParallel", "foreach", "magic", "MASS", "pbivnorm", "survival"] + "depends": ["AER", "MASS", "clordr", "doParallel", "foreach", "magic", "pbivnorm", "survival"] }, "clevr": { "name": "clevr", @@ -47639,19 +48137,19 @@ "name": "clhs", "version": "0.9.0", "sha256": "04hd0p51j15294fv1a9qx61p5yfmh8hcx784v3x1s0kx7km34saz", - "depends": ["cluster", "ggplot2", "plyr", "raster", "Rcpp", "RcppArmadillo", "reshape2", "sf", "sp"] + "depends": ["Rcpp", "RcppArmadillo", "cluster", "ggplot2", "plyr", "raster", "reshape2", "sf", "sp"] }, "cli": { "name": "cli", - "version": "3.6.2", - "sha256": "0lg131q9l8wpnggc3jlrjl1ri3dw0d1pi4nr1zlnlaqvf7ilj1sc", + "version": "3.6.3", + "sha256": "0ha8mijnzlz1cxsjk502j2gzspd8fnk3j79bvnqm871225ghi5a2", "depends": [] }, "cliapp": { "name": "cliapp", "version": "0.1.2", "sha256": "0yaahalirm89s5snhqpz11s36fp5ri5af9w6ljqlvfd94y6ckvfb", - "depends": ["cli", "crayon", "fansi", "glue", "prettycode", "progress", "R6", "selectr", "withr", "xml2"] + "depends": ["R6", "cli", "crayon", "fansi", "glue", "prettycode", "progress", "selectr", "withr", "xml2"] }, "clickR": { "name": "clickR", @@ -47669,18 +48167,18 @@ "name": "clickb", "version": "0.1", "sha256": "0cbhwvxb7xa34wf10saq65wiwlmw1cgnbiqgv6mfyd8dcdv25rwg", - "depends": ["DiscreteWeibull", "mclust", "MCMCpack"] + "depends": ["DiscreteWeibull", "MCMCpack", "mclust"] }, "clickstream": { "name": "clickstream", "version": "1.3.3", "sha256": "1pbw74kd1ig6xc9llv8idizx0rya2454kpd9z62ybwvy68vyargs", - "depends": ["arules", "ClickClust", "data_table", "ggplot2", "igraph", "linprog", "MASS", "plyr", "reshape2", "Rsolnp"] + "depends": ["ClickClust", "MASS", "Rsolnp", "arules", "data_table", "ggplot2", "igraph", "linprog", "plyr", "reshape2"] }, "clidamonger": { "name": "clidamonger", - "version": "1.1.0", - "sha256": "1kpfldyadrk7ayg9kjbs1kswdvzsy3qb5qr5mqrprx7mm8plsz6s", + "version": "1.2.0", + "sha256": "1rcfa6d3vfx6bbjjggrqfz10lppql7hjiy06jsrgybw2j0x73hmk", "depends": [] }, "clidatajp": { @@ -47699,13 +48197,13 @@ "name": "clifford", "version": "1.0-8", "sha256": "0gi4jajng1v0a45dl5qv8v279bm4lzfbkdsqp0bd1vil2ns1934j", - "depends": ["BH", "disordR", "magrittr", "mathjaxr", "partitions", "Rcpp"] + "depends": ["BH", "Rcpp", "disordR", "magrittr", "mathjaxr", "partitions"] }, "clifro": { "name": "clifro", "version": "3.2-5", "sha256": "1p2xy5r9axkj8yk6ywaq0w5i00bdfm15drjz227nx8p4vd3q6si8", - "depends": ["ggplot2", "httr", "lubridate", "magrittr", "RColorBrewer", "reshape2", "rvest", "scales", "stringr", "xml2"] + "depends": ["RColorBrewer", "ggplot2", "httr", "lubridate", "magrittr", "reshape2", "rvest", "scales", "stringr", "xml2"] }, "clikcorr": { "name": "clikcorr", @@ -47715,9 +48213,9 @@ }, "climaemet": { "name": "climaemet", - "version": "1.2.1", - "sha256": "1h3j8w6m568swa6qkfg107wvfdfg816p92y8ayss6acrrmrvax89", - "depends": ["dplyr", "ggplot2", "httr", "jsonlite", "rappdirs", "readr", "rlang", "tibble", "tidyr"] + "version": "1.3.0", + "sha256": "1ccf7639zk56m60cqd6z8h4s6nsvhv76d8ndbk832d9lak13b7wb", + "depends": ["cli", "dplyr", "ggplot2", "httr2", "jsonlite", "rappdirs", "readr", "rlang", "tibble", "tidyr"] }, "climateStability": { "name": "climateStability", @@ -47759,18 +48257,18 @@ "name": "climwin", "version": "1.2.3", "sha256": "1r2x5941k8l9z3517389y120sfhrskdpchc0pkibznza8aa95r85", - "depends": ["evd", "ggplot2", "gridExtra", "lme4", "lubridate", "Matrix", "MuMIn", "nlme", "numDeriv", "RcppRoll", "reshape"] + "depends": ["Matrix", "MuMIn", "RcppRoll", "evd", "ggplot2", "gridExtra", "lme4", "lubridate", "nlme", "numDeriv", "reshape"] }, "clinDR": { "name": "clinDR", "version": "2.4.1", "sha256": "06q8ajfa0gj8ddr6vb456vra4id7la50aidx3j2bnyaysbavd108", - "depends": ["doParallel", "DoseFinding", "dplyr", "foreach", "ggplot2", "glue", "mvtnorm", "purrr", "rstan", "shiny", "tibble", "tidyr", "waiter"] + "depends": ["DoseFinding", "doParallel", "dplyr", "foreach", "ggplot2", "glue", "mvtnorm", "purrr", "rstan", "shiny", "tibble", "tidyr", "waiter"] }, "clinDataReview": { "name": "clinDataReview", - "version": "1.6.0", - "sha256": "1xfv7r7rbr8fjkhrwxbpnvbf4khwcvd5pyam9fbbp6b65zr752c2", + "version": "1.6.1", + "sha256": "146cibny0w7g75cvzrdnd5i2fx6bilp93wqfrjgzap17h97lhj1r", "depends": ["base64enc", "bookdown", "clinUtils", "crosstalk", "data_table", "ggplot2", "haven", "htmltools", "htmlwidgets", "jsonlite", "jsonvalidate", "knitr", "plotly", "plyr", "rmarkdown", "stringr", "xfun", "xml2", "yaml"] }, "clinPK": { @@ -47783,7 +48281,7 @@ "name": "clinUtils", "version": "0.2.0", "sha256": "1i8bbfj9hbhjq7ppr3s3wxmnlis0j9xapdz88x44gcsmvxmr57dr", - "depends": ["crosstalk", "data_table", "DT", "haven", "htmlwidgets", "knitr", "plyr", "viridisLite"] + "depends": ["DT", "crosstalk", "data_table", "haven", "htmlwidgets", "knitr", "plyr", "viridisLite"] }, "clinfun": { "name": "clinfun", @@ -47791,6 +48289,12 @@ "sha256": "0dsbgj29s7c9pv6p2j3nvksnckym0gyb8hwqvks53mvy2pg9j1ni", "depends": ["mvtnorm"] }, + "clinicalomicsdbR": { + "name": "clinicalomicsdbR", + "version": "1.0.5", + "sha256": "1al919bdvmxfs8kxgi4hxwgsc9gjml6d00b7h813jhc4fi7ncq3p", + "depends": ["R6", "dplyr", "httr2", "jsonlite"] + }, "clinicalsignificance": { "name": "clinicalsignificance", "version": "2.0.0", @@ -47819,7 +48323,7 @@ "name": "clintools", "version": "0.9.10.1", "sha256": "0f8y1l3mqij6y87xf07gq7r2frigswcff5p3v119l6rldmkhp4fl", - "depends": ["dplyr", "ggplot2", "irr", "lme4", "nlme", "pander", "parameters", "pROC", "scales", "signal", "stringi", "survival", "xml2"] + "depends": ["dplyr", "ggplot2", "irr", "lme4", "nlme", "pROC", "pander", "parameters", "scales", "signal", "stringi", "survival", "xml2"] }, "cliot": { "name": "cliot", @@ -47849,12 +48353,12 @@ "name": "clmplus", "version": "1.0.0", "sha256": "024w8a4qj9sr0vqpfv5sm5gmcy4crin90sfx0z1y13iiznk7kvch", - "depends": ["ChainLadder", "forecast", "ggplot2", "gridExtra", "reshape2", "StMoMo"] + "depends": ["ChainLadder", "StMoMo", "forecast", "ggplot2", "gridExtra", "reshape2"] }, "clock": { "name": "clock", - "version": "0.7.0", - "sha256": "0x58xhngpd2rj7da9gr1x1zwz4rliza7aakfadkqsc4c7wxpmral", + "version": "0.7.1", + "sha256": "1n7hl5mbywfshk8jid5shnsqsn1al0v636wsy14f681zkp1jyba3", "depends": ["cli", "cpp11", "lifecycle", "rlang", "tzdb", "vctrs"] }, "clockify": { @@ -47885,13 +48389,19 @@ "name": "cloneRate", "version": "0.2.3", "sha256": "0ii1jbwk60dvqqrxr4z06xnajyf73ywhb06i42szcs6mjm1jxwsa", - "depends": ["ape", "BH", "Rcpp", "RcppEigen", "RcppParallel", "Rmpfr", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rmpfr", "StanHeaders", "ape", "rstan", "rstantools"] }, "clordr": { "name": "clordr", "version": "1.7.0", "sha256": "0lrws22aijsfdr595g2dfxsvnvbq6bs18glbdc07qkb27kcpvv1p", - "depends": ["doParallel", "foreach", "MASS", "pbivnorm", "rootSolve", "tmvmixnorm"] + "depends": ["MASS", "doParallel", "foreach", "pbivnorm", "rootSolve", "tmvmixnorm"] + }, + "closeloop": { + "name": "closeloop", + "version": "0.1.0", + "sha256": "1imwd16im4wvnha24gk453xrqq0bhhhbnn21pimfq0v02lj0248w", + "depends": ["combinat"] }, "cloudUtil": { "name": "cloudUtil", @@ -47921,7 +48431,7 @@ "name": "cloudstoR", "version": "0.2.0", "sha256": "0x9pl9x5sjs5vwcz5i1r5ymyv3rlv9adjc5y9kvxljdxgvnv6i08", - "depends": ["cli", "curl", "getPass", "httr", "keyring", "rio", "XML"] + "depends": ["XML", "cli", "curl", "getPass", "httr", "keyring", "rio"] }, "clptheory": { "name": "clptheory", @@ -47935,6 +48445,12 @@ "sha256": "088ks9lrhlyvg3yvlfmb0091yp6qp5bzg9h5r6ryv3bk6y56sajx", "depends": ["dplyr", "lubridate", "magrittr"] }, + "clrng": { + "name": "clrng", + "version": "0.0.5", + "sha256": "18brzhpivgzmvvjqkbkmrzw52ylz3d9l02l88020rb18pgr78clp", + "depends": ["RViennaCL", "Rcpp", "RcppEigen", "gpuR"] + }, "clttools": { "name": "clttools", "version": "1.3", @@ -47943,15 +48459,15 @@ }, "clubSandwich": { "name": "clubSandwich", - "version": "0.5.10", - "sha256": "0qx4qq0k01q06hrs348n417pf338dyfbcy2vsi0y3ap6y1rb7w6s", - "depends": ["sandwich"] + "version": "0.5.11", + "sha256": "1y9iy86w2440y22279is7vgi9m9v876p5954nhq5lg9ghpzbwzdq", + "depends": ["lifecycle", "sandwich"] }, "clubpro": { "name": "clubpro", "version": "0.6.2", "sha256": "0p407zd2gr4yxxpa97c37yxrvdkid00qf1ird58yl44wrwszh90w", - "depends": ["lattice", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "lattice"] }, "clue": { "name": "clue", @@ -47999,7 +48515,7 @@ "name": "clustAnalytics", "version": "0.5.5", "sha256": "063n6s1q2kc7a42fajd2z0rd0v6dxs443hv1vlaq6xhli8l8cylk", - "depends": ["aricode", "boot", "dplyr", "fossil", "igraph", "mcclust", "mclust", "Rcpp", "Rdpack", "truncnorm"] + "depends": ["Rcpp", "Rdpack", "aricode", "boot", "dplyr", "fossil", "igraph", "mcclust", "mclust", "truncnorm"] }, "clustEff": { "name": "clustEff", @@ -48011,19 +48527,19 @@ "name": "clustMD", "version": "1.2.1", "sha256": "0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny", - "depends": ["ggplot2", "MASS", "mclust", "msm", "mvtnorm", "reshape2", "truncnorm", "viridis"] + "depends": ["MASS", "ggplot2", "mclust", "msm", "mvtnorm", "reshape2", "truncnorm", "viridis"] }, "clustMixType": { "name": "clustMixType", - "version": "0.3-14", - "sha256": "0i3wlnwa075rlwgv5b2kzgnswv6r7hha7biq84jqsa61hhysjxxw", - "depends": ["combinat", "dplyr", "RColorBrewer", "rlang", "tibble"] + "version": "0.4-2", + "sha256": "1clby7x9jz0jpzmzni6g8zicysnf7ccxliglxr6ljigvkf747bg1", + "depends": ["RColorBrewer", "combinat", "dplyr", "rlang", "tibble"] }, "clustNet": { "name": "clustNet", "version": "1.2.0", "sha256": "05yphmjjkc42k945b8qhdrlws5bzr3f0wbancyibn8xh5697wqsx", - "depends": ["BiDAG", "clue", "graph", "igraph", "pcalg", "RBGL"] + "depends": ["BiDAG", "RBGL", "clue", "graph", "igraph", "pcalg"] }, "cluster": { "name": "cluster", @@ -48041,7 +48557,7 @@ "name": "clusterCons", "version": "1.2", "sha256": "1k1y6cqpb5fyi2mbx2i4jbiwz0fni44lnq0xnv3pl0x3dpscwh6q", - "depends": ["apcluster", "cluster", "lattice", "RColorBrewer"] + "depends": ["RColorBrewer", "apcluster", "cluster", "lattice"] }, "clusterCrit": { "name": "clusterCrit", @@ -48059,13 +48575,13 @@ "name": "clusterHD", "version": "1.0.2", "sha256": "16mk0bgvahxpjfawxkpjlfh9j1n5dldl6lhi7d1ssf5zaha35jkm", - "depends": ["Ckmeans_1d_dp", "cluster", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["Ckmeans_1d_dp", "Rcpp", "RcppArmadillo", "cluster", "mclust"] }, "clusterMI": { "name": "clusterMI", - "version": "1.1.1", - "sha256": "0zrwan1myq2lw15ga0xfxkwszq09bp25qj8dn9z9zrmb9s3lfsj7", - "depends": ["cat", "cluster", "ClusterR", "diceR", "e1071", "FactoMineR", "fpc", "glmnet", "knockoff", "lattice", "mclust", "mice", "micemd", "mix", "NPBayesImputeCat", "Rcpp", "RcppArmadillo", "reshape2", "Rfast", "usedist", "withr"] + "version": "1.2.1", + "sha256": "0irc1fcsvwkyv1g9zyjk9l6hmr1mj78rlndkd2ggg44r22mc1p0m", + "depends": ["ClusterR", "FactoMineR", "NPBayesImputeCat", "Rcpp", "RcppArmadillo", "Rfast", "cat", "diceR", "e1071", "fpc", "ggplot2", "glmnet", "gridExtra", "knockoff", "mclust", "mice", "micemd", "mix", "reshape2", "withr"] }, "clusterRepro": { "name": "clusterRepro", @@ -48077,13 +48593,13 @@ "name": "clusterSEs", "version": "2.6.5", "sha256": "0d8b79mg0wxfpmx3xq22p9apa2cs2ylbml7lf37w386s6kdgz7ns", - "depends": ["AER", "dfidx", "Formula", "lmtest", "mlogit", "plm", "sandwich"] + "depends": ["AER", "Formula", "dfidx", "lmtest", "mlogit", "plm", "sandwich"] }, "clusterSim": { "name": "clusterSim", - "version": "0.51-3", - "sha256": "0wlsr9700f3j9wcjzpiaqwj09i5v8n9bvwxvj4vmq1sqvz97v681", - "depends": ["ade4", "cluster", "e1071", "MASS", "R2HTML"] + "version": "0.51-4", + "sha256": "1bvjhbwxxn7mxdspjyly36d258p8js9l1zxsm15kj7nplj4pnkkn", + "depends": ["MASS", "ade4", "cluster", "e1071"] }, "clusterability": { "name": "clusterability", @@ -48091,12 +48607,6 @@ "sha256": "15gimcs6wrasafg1ys7id0mkg9fvacxbwpgg9d4b5avk4gff39bs", "depends": ["diptest"] }, - "clusteredinterference": { - "name": "clusteredinterference", - "version": "1.0.1", - "sha256": "01w7i9pmvwmrlf5q6y2d48ib0bm16j16xiw4pqnrvbndx4d6wf6n", - "depends": ["cubature", "Formula", "lme4", "numDeriv", "rootSolve"] - }, "clusterhap": { "name": "clusterhap", "version": "0.1", @@ -48113,19 +48623,19 @@ "name": "clustermole", "version": "1.1.1", "sha256": "1wfnv93b5rrdpad64gc3sv919yis92xa03ja29lsvcmkiqpbjsq9", - "depends": ["dplyr", "GSEABase", "GSVA", "magrittr", "rlang", "singscore", "tibble", "tidyr"] + "depends": ["GSEABase", "GSVA", "dplyr", "magrittr", "rlang", "singscore", "tibble", "tidyr"] }, "clustermq": { "name": "clustermq", "version": "0.9.4", "sha256": "1wrbkimckskldb77cyicqklrhyzp5d58hjgnzp2gwj73cysiw5zx", - "depends": ["globals", "narray", "progress", "R6", "Rcpp"] + "depends": ["R6", "Rcpp", "globals", "narray", "progress"] }, "clusternomics": { "name": "clusternomics", "version": "0.1.1", "sha256": "05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b", - "depends": ["magrittr", "MASS", "plyr"] + "depends": ["MASS", "magrittr", "plyr"] }, "clustertend": { "name": "clustertend", @@ -48143,13 +48653,13 @@ "name": "clustra", "version": "0.2.1", "sha256": "115rf9n5cc07yprminw3hh25zlmrv9v0jv63s29mx43iq28wvbnw", - "depends": ["data_table", "mgcv", "MixSim"] + "depends": ["MixSim", "data_table", "mgcv"] }, "clustrd": { "name": "clustrd", "version": "1.4.0", "sha256": "1pgl5yb37nsm0b1iniy7hadcxcbhlp5xwg77av74f568qp1pgx2c", - "depends": ["ca", "cluster", "corpcor", "dplyr", "fpc", "GGally", "ggplot2", "ggrepel", "plyr", "rARPACK", "tibble"] + "depends": ["GGally", "ca", "cluster", "corpcor", "dplyr", "fpc", "ggplot2", "ggrepel", "plyr", "rARPACK", "tibble"] }, "clustree": { "name": "clustree", @@ -48167,7 +48677,7 @@ "name": "clustvarsel", "version": "2.3.4", "sha256": "0hzvfcjs1k13j695jx6m0fgmcxy284gp4d59b7zmnvqib153x89x", - "depends": ["BMA", "foreach", "iterators", "Matrix", "mclust"] + "depends": ["BMA", "Matrix", "foreach", "iterators", "mclust"] }, "clv": { "name": "clv", @@ -48179,13 +48689,13 @@ "name": "cmR", "version": "1.1", "sha256": "1wism1czh94wfjgb1p4y0bvkb2ljkmkr4qkandbdjlgn013kjgv0", - "depends": ["fields", "Matrix", "plotrix"] + "depends": ["Matrix", "fields", "plotrix"] }, "cmaRs": { "name": "cmaRs", "version": "0.1.3", "sha256": "028z0x6a6aq3n0kplqg4pwqa7xilpi4s919xrqvd2lqnabhbjy8l", - "depends": ["AUC", "earth", "Matrix", "MPV", "Rmosek", "ROCR", "Ryacas0", "stringr"] + "depends": ["AUC", "MPV", "Matrix", "ROCR", "Rmosek", "Ryacas0", "earth", "stringr"] }, "cmaes": { "name": "cmaes", @@ -48197,7 +48707,7 @@ "name": "cmaesr", "version": "1.0.3", "sha256": "03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9", - "depends": ["BBmisc", "checkmate", "ggplot2", "ParamHelpers", "smoof"] + "depends": ["BBmisc", "ParamHelpers", "checkmate", "ggplot2", "smoof"] }, "cmahalanobis": { "name": "cmahalanobis", @@ -48227,13 +48737,13 @@ "name": "cmdfun", "version": "1.0.2", "sha256": "1pbcq7hi2lcmqnghmy3q2fsk0c9fy5m0637acyzmc096fxbx723j", - "depends": ["magrittr", "purrr", "R_utils", "rlang", "testthat", "usethis"] + "depends": ["R_utils", "magrittr", "purrr", "rlang", "testthat", "usethis"] }, "cmenet": { "name": "cmenet", "version": "0.1.2", "sha256": "0v3fassl21wdyx7s4shsib936fr41qr9hxjgcjc2f8az0ljd1p70", - "depends": ["glmnet", "hierNet", "MASS", "Rcpp", "RcppArmadillo", "sparsenet"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmnet", "hierNet", "sparsenet"] }, "cmfrec": { "name": "cmfrec", @@ -48243,8 +48753,8 @@ }, "cmhc": { "name": "cmhc", - "version": "0.2.7", - "sha256": "1iy7qslr1an5q1dpdx02p9734ghnmwql1cf5jcnl2a8cjhcgyxxn", + "version": "0.2.8", + "sha256": "1rjwc58f43iv3ri7z42z3gzfxcpkrzbd20r07rm6m14d7d5wqw0w", "depends": ["aws_s3", "digest", "dplyr", "httr", "readr", "rlang", "stringr", "tibble"] }, "cml": { @@ -48263,7 +48773,7 @@ "name": "cmmr", "version": "0.1.2", "sha256": "0nik1pzd1rckalvn7xh6s699kkdjnra3q3bn5x16c1lmpz5bp2s4", - "depends": ["httr", "progress", "RJSONIO"] + "depends": ["RJSONIO", "httr", "progress"] }, "cmna": { "name": "cmna", @@ -48317,31 +48827,31 @@ "name": "cmsaf", "version": "3.5.1", "sha256": "1h4h30k72nclpi8siha050kp8i0va2r1kvwhh3nczb3lhx11zmwl", - "depends": ["cmsafops", "cmsafvis", "colorspace", "colourpicker", "data_table", "FNN", "maps", "ncdf4", "R_utils", "raster", "SearchTrees", "shiny", "shinyFiles", "shinyjs", "shinythemes", "shinyWidgets", "xml2"] + "depends": ["FNN", "R_utils", "SearchTrees", "cmsafops", "cmsafvis", "colorspace", "colourpicker", "data_table", "maps", "ncdf4", "raster", "shiny", "shinyFiles", "shinyWidgets", "shinyjs", "shinythemes", "xml2"] }, "cmsafops": { "name": "cmsafops", "version": "1.4.0", "sha256": "118msgfysvbg08nvzrx5nmffvszn1cfx91lzd2hkd6la8sivk10h", - "depends": ["assertthat", "fields", "FNN", "ncdf4", "progress", "rainfarmr", "raster", "SearchTrees", "trend"] + "depends": ["FNN", "SearchTrees", "assertthat", "fields", "ncdf4", "progress", "rainfarmr", "raster", "trend"] }, "cmsafvis": { "name": "cmsafvis", - "version": "1.2.7", - "sha256": "18mdzvm0sxsr9fqrpd65kld8mnpjlmi0z6mn6dfgdbbx0qs85rgl", - "depends": ["assertthat", "cmsafops", "colorspace", "countrycode", "fields", "gridExtra", "mapproj", "maps", "ncdf4", "png", "progress", "raster", "rasterVis", "RColorBrewer", "sf", "terra"] + "version": "1.2.8", + "sha256": "1l1gsbadwgvxvbv37kzsnns4xvhzpmhfrqnzcgd97l7fqwr3yng4", + "depends": ["RColorBrewer", "assertthat", "cmsafops", "colorspace", "countrycode", "fields", "gridExtra", "mapproj", "maps", "ncdf4", "png", "progress", "raster", "rasterVis", "sf", "sp"] }, "cmstatr": { "name": "cmstatr", "version": "0.9.3", "sha256": "1hi3zyw73jxrl2spfbbfk5xnyg31jqlslz1342p5s45k4ydvqikm", - "depends": ["dplyr", "generics", "ggplot2", "kSamples", "MASS", "purrr", "rlang", "tibble"] + "depends": ["MASS", "dplyr", "generics", "ggplot2", "kSamples", "purrr", "rlang", "tibble"] }, "cmstatrExt": { "name": "cmstatrExt", "version": "0.4.0", "sha256": "06py81q7viz2mh58qn16wvw9xw95vw06cg465qhdrh80j07mygzg", - "depends": ["dplyr", "generics", "Rcpp", "rlang", "testthat"] + "depends": ["Rcpp", "dplyr", "generics", "rlang", "testthat"] }, "cmtest": { "name": "cmtest", @@ -48357,15 +48867,15 @@ }, "cna": { "name": "cna", - "version": "3.6.0", - "sha256": "1g0h4c8xba7i0fv5azdhx0c403w9ccs3hyarsr2qxnw64f05yazh", - "depends": ["car", "Matrix", "matrixStats", "Rcpp"] + "version": "3.6.2", + "sha256": "1jjq77a2zzzkzv6sgl7274c8chznwc59cv8gnph3xya2ysmybspq", + "depends": ["Matrix", "Rcpp", "car", "matrixStats"] }, "cnaOpt": { "name": "cnaOpt", "version": "0.5.2", "sha256": "1ciqh0d88270hizlsks7d05kggaszzl6add2n143z7cswkgfvkyr", - "depends": ["cna", "dplyr", "ggplot2", "matrixStats", "Rcpp"] + "depends": ["Rcpp", "cna", "dplyr", "ggplot2", "matrixStats"] }, "cnbdistr": { "name": "cnbdistr", @@ -48401,13 +48911,13 @@ "name": "coala", "version": "0.7.2", "sha256": "1y736gagr1nkyxvsgkn411si6xv6w4sp8m7p20za07y4m71z900i", - "depends": ["assertthat", "digest", "R6", "Rcpp", "RcppArmadillo", "rehh", "scrm"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "assertthat", "digest", "rehh", "scrm"] }, "coalescentMCMC": { "name": "coalescentMCMC", "version": "0.4-4", "sha256": "09abhcp6y98378kf018inhxpkkirch5636nskywn0p6shp2q278x", - "depends": ["ape", "coda", "lattice", "Matrix", "phangorn"] + "depends": ["Matrix", "ape", "coda", "lattice", "phangorn"] }, "coarseDataTools": { "name": "coarseDataTools", @@ -48437,25 +48947,31 @@ "name": "cobs", "version": "1.3-8", "sha256": "08cqpiylbfy5j5xxajpngqaycmmciwhyf3sk3972x2l6rg3lj81c", - "depends": ["quantreg", "SparseM"] + "depends": ["SparseM", "quantreg"] }, "coca": { "name": "coca", "version": "1.1.0", "sha256": "1lh7q3ip1jaz5zj5zcnd5whwpjw6zcrxs6j0j8mnmjsnw2kr4m5n", - "depends": ["caret", "cluster", "fpc", "glmnet", "Matrix", "nnet", "pheatmap", "RColorBrewer", "sparcl"] + "depends": ["Matrix", "RColorBrewer", "caret", "cluster", "fpc", "glmnet", "nnet", "pheatmap", "sparcl"] }, "cocktailApp": { "name": "cocktailApp", "version": "0.2.3", "sha256": "134y64z297r6fqiakqa42f15i5sxlaczc9adxrkicq9275kjf2fn", - "depends": ["dplyr", "DT", "forcats", "ggplot2", "ggtern", "magrittr", "shiny", "shinythemes", "tibble", "tidyr"] + "depends": ["DT", "dplyr", "forcats", "ggplot2", "ggtern", "magrittr", "shiny", "shinythemes", "tibble", "tidyr"] }, "coconots": { "name": "coconots", "version": "1.1.3", "sha256": "1mymq7rsmawnh6m3m7c39kg8mp829f7kyjnj3hll4jsw6q1sz2fi", - "depends": ["forecast", "ggplot2", "HMMpa", "JuliaConnectoR", "matrixStats", "numDeriv", "Rcpp", "RcppParallel", "StanHeaders"] + "depends": ["HMMpa", "JuliaConnectoR", "Rcpp", "RcppParallel", "StanHeaders", "forecast", "ggplot2", "matrixStats", "numDeriv"] + }, + "cocons": { + "name": "cocons", + "version": "0.1.1", + "sha256": "1kcnbhvh42v5rgm730j8qy3xz5bwq265dvj2690p1b2add10v4ml", + "depends": ["BH", "Rcpp", "fields", "knitr", "optimParallel", "spam"] }, "cocor": { "name": "cocor", @@ -48501,21 +49017,21 @@ }, "coda4microbiome": { "name": "coda4microbiome", - "version": "0.2.3", - "sha256": "1nr2xq7pal90dnc76y9hj3qfy5anxjihrlb8sfxnvx5pz590m2wb", - "depends": ["circlize", "ComplexHeatmap", "corrplot", "ggplot2", "ggpubr", "glmnet", "plyr", "pROC", "survival", "survminer"] + "version": "0.2.4", + "sha256": "1gslvlhnps5ibrcgm6b487ii9z4blk92mnp26z4xb7m23l7349c1", + "depends": ["ComplexHeatmap", "circlize", "corrplot", "ggplot2", "ggpubr", "glmnet", "pROC", "plyr", "survival", "survminer"] }, "codacore": { "name": "codacore", "version": "0.0.4", "sha256": "047klw705a4x0b93xvwd6839j30gg9jl1dgwdnkcqjiwn9jx8fb3", - "depends": ["gtools", "keras", "pROC", "R6", "tensorflow"] + "depends": ["R6", "gtools", "keras", "pROC", "tensorflow"] }, "codalm": { "name": "codalm", "version": "0.1.2", "sha256": "09q7i96wga55xl8wwkb4i2sisn97wd21zqpmasykpi1aamzysqki", - "depends": ["future", "future_apply", "SQUAREM"] + "depends": ["SQUAREM", "future", "future_apply"] }, "codaredistlm": { "name": "codaredistlm", @@ -48617,7 +49133,7 @@ "name": "codingMatrices", "version": "0.4.0", "sha256": "0554jbwy2hzdqy4vf4y26jniw8pp8j7a7ybq9s7120zfkxihccag", - "depends": ["fractional", "Matrix"] + "depends": ["Matrix", "fractional"] }, "codyn": { "name": "codyn", @@ -48657,9 +49173,9 @@ }, "cofad": { "name": "cofad", - "version": "0.1.1", - "sha256": "0c27wfdk98mq0531avlgfxf2wmxcjyg39pgl9i37im7ri2s7kpnr", - "depends": [] + "version": "0.3.0", + "sha256": "00m32r1rbc5f2b7viks68ff3sv7p4qvc1i8qag0z75l2jxi839f0", + "depends": ["Hmisc", "dplyr", "magrittr", "readr", "rhandsontable", "rlang", "shiny", "shinydashboard", "shinyjs", "stringr", "tibble"] }, "cofeatureR": { "name": "cofeatureR", @@ -48683,7 +49199,7 @@ "name": "coga", "version": "1.2.2", "sha256": "0h4qps0k973ia2aw19smlh84p34nnwdrfgk9nm4pgcs3qx3pn102", - "depends": ["cubature", "Rcpp", "RcppGSL"] + "depends": ["Rcpp", "RcppGSL", "cubature"] }, "coglasso": { "name": "coglasso", @@ -48695,7 +49211,7 @@ "name": "cogmapr", "version": "0.9.3", "sha256": "0aqlk6248m3pad0fwarvxvxfn4qfazhdbdplg8haw3aj165szq43", - "depends": ["dplyr", "ggplot2", "graph", "magrittr", "Rgraphviz", "tidyr"] + "depends": ["Rgraphviz", "dplyr", "ggplot2", "graph", "magrittr", "tidyr"] }, "cognitoR": { "name": "cognitoR", @@ -48707,7 +49223,7 @@ "name": "cohortBuilder", "version": "0.2.0", "sha256": "117gdqga61h24xa1h534837pz34ym5hnfz6731rrm3lnlzd171w6", - "depends": ["dplyr", "formatR", "ggplot2", "glue", "jsonlite", "magrittr", "purrr", "R6", "rlang", "tibble", "tidyr"] + "depends": ["R6", "dplyr", "formatR", "ggplot2", "glue", "jsonlite", "magrittr", "purrr", "rlang", "tibble", "tidyr"] }, "cohorts": { "name": "cohorts", @@ -48719,7 +49235,7 @@ "name": "cohorttools", "version": "0.1.6", "sha256": "17gz4887vhkk0qr5mcv0vcfaxiws1pk1fdd4y8wqbl57ikn5i9vs", - "depends": ["cmprsk", "DiagrammeR", "DiagrammeRsvg", "Epi", "ggplot2", "mgcv", "rsvg", "survival"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "Epi", "cmprsk", "ggplot2", "mgcv", "rsvg", "survival"] }, "coil": { "name": "coil", @@ -48743,7 +49259,7 @@ "name": "cointReg", "version": "0.2.0", "sha256": "0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4", - "depends": ["checkmate", "MASS", "matrixStats"] + "depends": ["MASS", "checkmate", "matrixStats"] }, "cointmonitoR": { "name": "cointmonitoR", @@ -48755,7 +49271,7 @@ "name": "cold", "version": "2.0-3", "sha256": "1y2l1v7s1v3m4nhlnl72n075h53vm93vxmfn4b6269n690wl9s6d", - "depends": ["cubature", "MASS"] + "depends": ["MASS", "cubature"] }, "colf": { "name": "colf", @@ -48771,8 +49287,8 @@ }, "collapse": { "name": "collapse", - "version": "2.0.14", - "sha256": "0njmis9a0jc8xmdxgxhpydsj2ygb89hg402gpqaw1h5bcwwpf0m8", + "version": "2.0.15", + "sha256": "19pa35yhdkas3kyrj4g3p794lckmrmhgy6gcqfqkcbqzzqiq6b2s", "depends": ["Rcpp"] }, "collapsibleTree": { @@ -48799,6 +49315,12 @@ "sha256": "003zlp5s2ilq3pq0imlp7p46jkfihwzg1hkkgk7378ikcbwnz17z", "depends": [] }, + "collegeScorecard": { + "name": "collegeScorecard", + "version": "0.1.0", + "sha256": "06v8r8ldlx1n4wp5mhzizh92pyysj7zjvcn6vrh5n4w28f719i8q", + "depends": [] + }, "collidr": { "name": "collidr", "version": "0.1.3", @@ -48809,7 +49331,7 @@ "name": "collin", "version": "0.0.4", "sha256": "0dh3k9rh1ykrd5nvp5nh4q7zvv835hx8ydpyml88d90ksy8za90p", - "depends": ["dlnm", "MASS", "mgcv", "nlme", "VGAM"] + "depends": ["MASS", "VGAM", "dlnm", "mgcv", "nlme"] }, "collinear": { "name": "collinear", @@ -48905,7 +49427,7 @@ "name": "colorednoise", "version": "1.1.2", "sha256": "1wyqliwy64hxbhhij8m5f9s4ranjpqc3qzlkr9m37c9z70lgjril", - "depends": ["data_table", "purrr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "purrr"] }, "colorfindr": { "name": "colorfindr", @@ -48935,13 +49457,13 @@ "name": "colormap", "version": "0.1.4", "sha256": "0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy", - "depends": ["ggplot2", "stringr", "V8"] + "depends": ["V8", "ggplot2", "stringr"] }, "colorpatch": { "name": "colorpatch", "version": "0.1.2", "sha256": "18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf", - "depends": ["colorspace", "ggplot2", "gridExtra", "TSP"] + "depends": ["TSP", "colorspace", "ggplot2", "gridExtra"] }, "colorplane": { "name": "colorplane", @@ -48959,7 +49481,7 @@ "name": "colors3d", "version": "1.0.1", "sha256": "0d78y5v329fhaqhw0a0cgkpiajmqb91vl9809fiwnvl2b4x3j51r", - "depends": ["combinat", "FNN", "plyr", "scales"] + "depends": ["FNN", "combinat", "plyr", "scales"] }, "colorsGen": { "name": "colorsGen", @@ -48975,8 +49497,8 @@ }, "colorspace": { "name": "colorspace", - "version": "2.1-0", - "sha256": "0k31hazd2rq5lyg3y89y2v5jqadz2qlxd1bhvj89q4aldfxql1q4", + "version": "2.1-1", + "sha256": "02ydb0vncck0l9shfbz07gymdy5l2vinb0miivyb1r6nykjww8g7", "depends": [] }, "colouR": { @@ -48989,7 +49511,7 @@ "name": "colourlovers", "version": "0.3.6", "sha256": "13fqn6hbqjk3d8krpqb3hmsq06qrbks8a9ia5441hd6m7m8wjjkc", - "depends": ["httr", "jsonlite", "png", "XML"] + "depends": ["XML", "httr", "jsonlite", "png"] }, "colourpicker": { "name": "colourpicker", @@ -49013,7 +49535,7 @@ "name": "cols", "version": "1.1", "sha256": "1rf27b1xqxqyd99574hj1nv65r08z5ap8rai64baw1skzr5aznkk", - "depends": ["quadprog", "Rfast2"] + "depends": ["Rfast2", "quadprog"] }, "cols4all": { "name": "cols4all", @@ -49043,7 +49565,7 @@ "name": "comato", "version": "1.1", "sha256": "0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6", - "depends": ["cluster", "clusterSim", "gdata", "igraph", "lattice", "Matrix", "XML"] + "depends": ["Matrix", "XML", "cluster", "clusterSim", "gdata", "igraph", "lattice"] }, "combat_enigma": { "name": "combat.enigma", @@ -49055,7 +49577,7 @@ "name": "combinIT", "version": "2.0.0", "sha256": "1l2ypnrm2qi1z10c2qyyaqqcjgk3mgsh80b3j9zrjwq9zdakrhi5", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm"] }, "combinat": { "name": "combinat", @@ -49091,7 +49613,7 @@ "name": "combiter", "version": "1.0.3", "sha256": "11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6", - "depends": ["iterators", "itertools", "Rcpp"] + "depends": ["Rcpp", "iterators", "itertools"] }, "comclim": { "name": "comclim", @@ -49109,13 +49631,13 @@ "name": "cometr", "version": "0.4.0", "sha256": "022fz7b94xl56ss1773n3g9zwfjm8mqfqds68ngvfq5498npd9z5", - "depends": ["callr", "digest", "httr", "jsonlite", "R_utils", "R6", "yaml"] + "depends": ["R6", "R_utils", "callr", "digest", "httr", "jsonlite", "yaml"] }, "comets": { "name": "comets", - "version": "0.0-1", - "sha256": "1qxy0cdp8cjkwlgii00lq5qzcimlrb8fqlg2xrw8rn6ik1nrmhs0", - "depends": ["Formula", "glmnet", "ranger"] + "version": "0.0-2", + "sha256": "13ni4c0szfizgad56ydxz8i5w25vr76h18jspc260z2mzcns084z", + "depends": ["Formula", "coin", "glmnet", "ranger", "survival"] }, "comf": { "name": "comf", @@ -49151,18 +49673,18 @@ "name": "communication", "version": "0.1", "sha256": "08fkllwwcw2llpg5ivxhqghc88qfg1vdy0ciif3xazhhymb8wavb", - "depends": ["abind", "diagram", "GGally", "ggplot2", "gtable", "gtools", "igraph", "magrittr", "plyr", "purrr", "RColorBrewer", "Rcpp", "RcppArmadillo", "reshape2", "scales", "signal", "tuneR", "useful", "wrassp"] + "depends": ["GGally", "RColorBrewer", "Rcpp", "RcppArmadillo", "abind", "diagram", "ggplot2", "gtable", "gtools", "igraph", "magrittr", "plyr", "purrr", "reshape2", "scales", "signal", "tuneR", "useful", "wrassp"] }, "comorbidPGS": { "name": "comorbidPGS", "version": "0.3.4", "sha256": "1dy8yfyy88vw2x8mk6n3nx2dbkf17m4ibvbkxhrywralvll0wspa", - "depends": ["ggplot2", "MASS", "nnet"] + "depends": ["MASS", "ggplot2", "nnet"] }, "comorbidity": { "name": "comorbidity", - "version": "1.0.7", - "sha256": "189z23a66mz10rzqzgljkygyrgishm4mzzrqhqs1ba335dzvzm3d", + "version": "1.1.0", + "sha256": "1j86631kyh774hs6a4ivmhkbj6kc733vy0pn1sa86yh0s6iqbmdb", "depends": ["checkmate", "data_table", "stringi"] }, "comorosmaps": { @@ -49181,7 +49703,7 @@ "name": "comparator", "version": "0.1.2", "sha256": "1mygip50mc3jni1zc6jhjg2mx61sjgdq5w7snqdvv1rycp3fdpb1", - "depends": ["clue", "proxy", "Rcpp"] + "depends": ["Rcpp", "clue", "proxy"] }, "compare": { "name": "compare", @@ -49205,13 +49727,13 @@ "name": "compareGroups", "version": "4.8.0", "sha256": "0v747rxg864gml937zizp80sf15jw2v4svcafdysna62shp4rypv", - "depends": ["chron", "flextable", "HardyWeinberg", "kableExtra", "knitr", "officer", "rmarkdown", "survival", "writexl"] + "depends": ["HardyWeinberg", "chron", "flextable", "kableExtra", "knitr", "officer", "rmarkdown", "survival", "writexl"] }, "compareMCMCs": { "name": "compareMCMCs", "version": "0.5.0", "sha256": "0g3fzazfs6f8ni251ilzk0q65hvgfhglly7v4rmkl4jwhzvsz1yr", - "depends": ["coda", "ggplot2", "nimble", "R6", "reshape2", "xtable"] + "depends": ["R6", "coda", "ggplot2", "nimble", "reshape2", "xtable"] }, "comparer": { "name": "comparer", @@ -49229,13 +49751,13 @@ "name": "compas", "version": "0.1.1", "sha256": "0hhqg2xsifnh1v931mmfij6s5idy9s984hdnrkp9n3f3azgwvcz4", - "depends": ["bio3d", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "bio3d"] }, "comperank": { "name": "comperank", "version": "0.1.1", "sha256": "0wz46rkpx1cjjng3i03pms2x27cik9wbx7al5r289ym3664zb83m", - "depends": ["comperes", "dplyr", "Rcpp", "rlang", "tibble"] + "depends": ["Rcpp", "comperes", "dplyr", "rlang", "tibble"] }, "comperes": { "name": "comperes", @@ -49259,7 +49781,7 @@ "name": "compindexR", "version": "0.1.3", "sha256": "1glc1y6wa1g7zxj1xwj0fgcfsy118xhd637gi8zsz7l9vxj614cp", - "depends": ["car", "dplyr", "NlcOptim", "pracma"] + "depends": ["NlcOptim", "car", "dplyr", "pracma"] }, "completejourney": { "name": "completejourney", @@ -49271,7 +49793,7 @@ "name": "complex", "version": "1.0.0", "sha256": "1f1xyvapswfsd7gbw8279m1pdjrry68hkci69d9h3gwav2v3fi4l", - "depends": ["greybox", "legion", "mvtnorm", "nloptr", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "greybox", "legion", "mvtnorm", "nloptr", "pracma"] }, "complexNet": { "name": "complexNet", @@ -49295,7 +49817,7 @@ "name": "complexplus", "version": "2.1", "sha256": "16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx", - "depends": ["expm", "Matrix"] + "depends": ["Matrix", "expm"] }, "complmrob": { "name": "complmrob", @@ -49307,7 +49829,7 @@ "name": "compositions", "version": "2.0-8", "sha256": "147j3sbqcy3hfja1zs8s8p9zzp9a68vk52s545c2p6anyj4381n5", - "depends": ["bayesm", "MASS", "robustbase", "tensorA"] + "depends": ["MASS", "bayesm", "robustbase", "tensorA"] }, "compound_Cox": { "name": "compound.Cox", @@ -49361,13 +49883,13 @@ "name": "conStruct", "version": "1.0.6", "sha256": "00mmlmqk3wixjycmn2wybq4vkq91jmvhjab6pyvfzk1nh3nq428i", - "depends": ["BH", "caroline", "doParallel", "foreach", "gtools", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "caroline", "doParallel", "foreach", "gtools", "rstan", "rstantools"] }, "conText": { "name": "conText", "version": "1.4.3", "sha256": "0ahnbmpphzi2xshmsybphkc9vkj2lr2bi1jssdx97288awwcgayb", - "depends": ["dplyr", "fastDummies", "ggplot2", "Matrix", "quanteda", "reshape2", "stringr", "text2vec", "tidyr"] + "depends": ["Matrix", "dplyr", "fastDummies", "ggplot2", "quanteda", "reshape2", "stringr", "text2vec", "tidyr"] }, "conTree": { "name": "conTree", @@ -49391,7 +49913,7 @@ "name": "concaveman", "version": "1.1.0", "sha256": "0b3fx3y60ibb73pqx5591jq1n86242qajfxbz3vzz6rxxspddlcz", - "depends": ["dplyr", "jsonlite", "magrittr", "sf", "V8"] + "depends": ["V8", "dplyr", "jsonlite", "magrittr", "sf"] }, "conclust": { "name": "conclust", @@ -49403,7 +49925,7 @@ "name": "concom", "version": "1.0.0", "sha256": "1rqb04kv4ygx1rpnj4dqa3jnx3iy9a3c9d8x3bci969zd9lk7kzb", - "depends": ["BH", "english", "Rcpp", "rgl", "Rvcg"] + "depends": ["BH", "Rcpp", "Rvcg", "english", "rgl"] }, "concorR": { "name": "concorR", @@ -49445,7 +49967,7 @@ "name": "condSURV", "version": "2.0.4", "sha256": "11ji8q8qhmpyc1zcdckjsq40bg2gbhbp0222fsrdkfglq3h4dg5x", - "depends": ["doParallel", "doRNG", "foreach", "KernSmooth", "np", "survival"] + "depends": ["KernSmooth", "doParallel", "doRNG", "foreach", "np", "survival"] }, "condTruncMVN": { "name": "condTruncMVN", @@ -49493,13 +50015,13 @@ "name": "conductor", "version": "0.1.1", "sha256": "1kjnjpaiya5ym20y1vry53dshna14dvcjfzgbfizg4g1izsg1czy", - "depends": ["htmltools", "R6", "shiny"] + "depends": ["R6", "htmltools", "shiny"] }, "condusco": { "name": "condusco", "version": "0.1.0", "sha256": "0zydinzlksynkz4r712rzv9qqdx8dkdz3h1ygi9cfmd6hya3580s", - "depends": ["assertthat", "bigrquery", "DBI", "jsonlite"] + "depends": ["DBI", "assertthat", "bigrquery", "jsonlite"] }, "condvis": { "name": "condvis", @@ -49511,7 +50033,7 @@ "name": "condvis2", "version": "0.1.2", "sha256": "0zxr0m50gyg5b1ghdx5ysq8f389gg00zx719zqb47ign83xlbn63", - "depends": ["cluster", "colorspace", "DendSer", "ggplot2", "gower", "plyr", "RColorBrewer", "scales", "shiny"] + "depends": ["DendSer", "RColorBrewer", "cluster", "colorspace", "ggplot2", "gower", "plyr", "scales", "shiny"] }, "coneproj": { "name": "coneproj", @@ -49559,7 +50081,7 @@ "name": "configr", "version": "0.3.5", "sha256": "1qlfza9fwqdhw37gxhgxgp4x2dg1qlvdw0rf9fn6a8hgjaj9z8a3", - "depends": ["glue", "ini", "jsonlite", "RcppTOML", "stringr", "yaml"] + "depends": ["RcppTOML", "glue", "ini", "jsonlite", "stringr", "yaml"] }, "configural": { "name": "configural", @@ -49571,7 +50093,7 @@ "name": "confintROB", "version": "1.0-1", "sha256": "13fbq4zxs90sy49c55b9i2i8yq3g3p4p45cx30rs7yrb3610zkfb", - "depends": ["foreach", "lme4", "MASS", "mvtnorm", "tidyr"] + "depends": ["MASS", "foreach", "lme4", "mvtnorm", "tidyr"] }, "confinterpret": { "name": "confinterpret", @@ -49595,7 +50117,7 @@ "name": "conflr", "version": "0.1.1", "sha256": "1bjdmvi0n8746g7dxwgzh3fi33sq4bgfr0nd3nqd2caj8ryi2gv9", - "depends": ["askpass", "commonmark", "curl", "glue", "httr", "knitr", "miniUI", "purrr", "R6", "rlang", "rmarkdown", "rstudioapi", "shiny", "stringi", "xml2"] + "depends": ["R6", "askpass", "commonmark", "curl", "glue", "httr", "knitr", "miniUI", "purrr", "rlang", "rmarkdown", "rstudioapi", "shiny", "stringi", "xml2"] }, "conformalClassification": { "name": "conformalClassification", @@ -49661,19 +50183,19 @@ "name": "conleyreg", "version": "0.1.7", "sha256": "1mvbzqd83vd54ig4kbi1v3h4v0j6pyj8a5ja1f3w2n7k8aszy748", - "depends": ["data_table", "doParallel", "fixest", "foreach", "lmtest", "lwgeom", "Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "s2", "sf"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "data_table", "doParallel", "fixest", "foreach", "lmtest", "lwgeom", "s2", "sf"] }, "conmet": { "name": "conmet", "version": "0.1.0", "sha256": "0iwr8mmh9lk0psqxkgnd7ldhg57ivbkv0b3a18gli06983mhzjdc", - "depends": ["dplyr", "DT", "foreign", "Hmisc", "lavaan", "openxlsx", "purrr", "semTools", "shiny", "shinydashboard", "shinyWidgets", "stringr", "summarytools", "waiter"] + "depends": ["DT", "Hmisc", "dplyr", "foreign", "lavaan", "openxlsx", "purrr", "semTools", "shiny", "shinyWidgets", "shinydashboard", "stringr", "summarytools", "waiter"] }, "connectapi": { "name": "connectapi", "version": "0.2.0", "sha256": "0k3z30kgz8yl07kxfbqy1w8bdr0viyglibxv6y36f46q6nf1mf6a", - "depends": ["bit64", "fs", "glue", "httr", "jsonlite", "lifecycle", "magrittr", "purrr", "R6", "rlang", "tibble", "uuid", "vctrs"] + "depends": ["R6", "bit64", "fs", "glue", "httr", "jsonlite", "lifecycle", "magrittr", "purrr", "rlang", "tibble", "uuid", "vctrs"] }, "connections": { "name": "connections", @@ -49691,7 +50213,7 @@ "name": "connectwidgets", "version": "0.2.1", "sha256": "0lgr36699hnjwkjx56akwwnzkl5qm587yhqamxr6a53nh1j3h11y", - "depends": ["bslib", "crosstalk", "digest", "dplyr", "glue", "htmltools", "htmlwidgets", "httr", "jsonlite", "magrittr", "purrr", "R6", "reactable", "reactR", "rlang", "sass", "tibble"] + "depends": ["R6", "bslib", "crosstalk", "digest", "dplyr", "glue", "htmltools", "htmlwidgets", "httr", "jsonlite", "magrittr", "purrr", "reactR", "reactable", "rlang", "sass", "tibble"] }, "conogive": { "name": "conogive", @@ -49703,7 +50225,7 @@ "name": "conos", "version": "1.5.2", "sha256": "0p66gb308w2zfsppm0k1vsvgr33kzzhql0vh7l39vlsgayi00skk", - "depends": ["abind", "ComplexHeatmap", "cowplot", "dendextend", "dplyr", "ggplot2", "ggrepel", "gridExtra", "igraph", "irlba", "leidenAlg", "magrittr", "Matrix", "N2R", "R6", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "reshape2", "rlang", "Rtsne", "sccore"] + "depends": ["ComplexHeatmap", "Matrix", "N2R", "R6", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "Rtsne", "abind", "cowplot", "dendextend", "dplyr", "ggplot2", "ggrepel", "gridExtra", "igraph", "irlba", "leidenAlg", "magrittr", "reshape2", "rlang", "sccore"] }, "conover_test": { "name": "conover.test", @@ -49715,13 +50237,13 @@ "name": "conquer", "version": "1.3.3", "sha256": "1fnyjym21i9hw2d1c9da0wvjzbi9abn46n0lg6if5w2asxg1bim2", - "depends": ["Matrix", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "matrixStats"] }, "conquestr": { "name": "conquestr", - "version": "1.3.0", - "sha256": "0f7mrx9ss9ja0maci2ydffz90i7v6p9x8wsgbz78dlw8zv2vc630", - "depends": ["dplyr", "ggplot2", "ggrepel", "kableExtra", "magrittr", "Rcpp", "rlang", "stringr", "tidyr", "tidyselect", "zlib"] + "version": "1.3.4", + "sha256": "12l311bggayxkab5ljkw35qm02m3gzlvrn88a7ka1gs7if4q0d7v", + "depends": ["Rcpp", "dplyr", "ggplot2", "ggrepel", "kableExtra", "magrittr", "rlang", "stringr", "tidyr", "tidyselect", "zlib"] }, "conrad": { "name": "conrad", @@ -49733,7 +50255,13 @@ "name": "conserveR", "version": "1.0.4", "sha256": "05b1pqgbd9sh4lyg9zqjfg4019dqp8xj3k1w31qqdld8m3g5lrd6", - "depends": ["cowplot", "GGally", "ggplot2", "ggrepel", "magrittr", "network", "rlang", "scales", "sna"] + "depends": ["GGally", "cowplot", "ggplot2", "ggrepel", "magrittr", "network", "rlang", "scales", "sna"] + }, + "consibiocloudclient": { + "name": "consibiocloudclient", + "version": "1.0.0", + "sha256": "09miin2w37lgga8r31yd1gk7h5gmmz0mmlvz4skr2ppnfkp9nli6", + "depends": ["httr2", "magrittr"] }, "consolechoice": { "name": "consolechoice", @@ -49751,7 +50279,7 @@ "name": "consortr", "version": "0.9.1", "sha256": "1c71wvr7sckrv4k65l71l160z6d9amzyydbi6mf2b79zh9zv8g1g", - "depends": ["data_table", "DiagrammeR", "dplyr", "magrittr", "purrr", "rlang", "shiny", "shinydashboard", "tibble"] + "depends": ["DiagrammeR", "data_table", "dplyr", "magrittr", "purrr", "rlang", "shiny", "shinydashboard", "tibble"] }, "constants": { "name": "constants", @@ -49773,15 +50301,15 @@ }, "constructive": { "name": "constructive", - "version": "0.3.0", - "sha256": "065ajq3ah3gk2chpd62bwnz72z0xy5kcmwm7mcxkaxq1xps3wfd9", + "version": "1.0.1", + "sha256": "1w75ydhpm49a4prkb9kys1866jn552i85p71y446qj7cj46m8yih", "depends": ["cli", "diffobj", "rlang", "waldo"] }, "contFracR": { "name": "contFracR", "version": "1.2.1", "sha256": "0yigrrs36q9wl8bla65ks1ykf233j33jwcqbhdhygryfhxp5cxab", - "depends": ["gmp", "go2bigq", "Rmpfr"] + "depends": ["Rmpfr", "gmp", "go2bigq"] }, "contTimeCausal": { "name": "contTimeCausal", @@ -49799,7 +50327,7 @@ "name": "container", "version": "1.0.4", "sha256": "0vpha9s5d8mxqdzmbfy92qz78b6gfibwgp1ijq70c5vqs2clkzb1", - "depends": ["data_table", "R6"] + "depends": ["R6", "data_table"] }, "contentid": { "name": "contentid", @@ -49823,19 +50351,19 @@ "name": "contingencytables", "version": "3.0.0", "sha256": "1cp5cmvcxqzsagkmy4h612zrfxvaiv0ililvnzbcpxlxva3xmyba", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "contourPlot": { "name": "contourPlot", "version": "0.2.0", "sha256": "0bjwq3p57d6hadln8vwjkh7c9sbb466h3zcq9kpx7kd31z6x8gnz", - "depends": ["interp", "RColorBrewer"] + "depends": ["RColorBrewer", "interp"] }, "contoureR": { "name": "contoureR", "version": "1.0.5", "sha256": "1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn", - "depends": ["geometry", "plyr", "Rcpp", "reshape"] + "depends": ["Rcpp", "geometry", "plyr", "reshape"] }, "contrast": { "name": "contrast", @@ -49853,7 +50381,7 @@ "name": "control", "version": "0.2.5", "sha256": "02s8h5kwpzfrivx3ign84gwlybkcs03ibawyxdny9zz5yhb7x3bs", - "depends": ["expm", "Matrix", "pracma", "signal"] + "depends": ["Matrix", "expm", "pracma", "signal"] }, "controlTest": { "name": "controlTest", @@ -49865,7 +50393,7 @@ "name": "controlfunctionIV", "version": "0.1.1", "sha256": "0g0nakc1mss7837xhs8bymy4cncljjkj7k0n4dvw44gxbc2l8j15", - "depends": ["AER", "dr", "Formula", "orthoDr"] + "depends": ["AER", "Formula", "dr", "orthoDr"] }, "contsurvplot": { "name": "contsurvplot", @@ -49877,7 +50405,7 @@ "name": "convdistr", "version": "1.6.2", "sha256": "1mi5sa9lyn9pdmdlrah8fvxdzm1gqblh3r50y1g40902cryf5yds", - "depends": ["dplyr", "extraDistr", "ggplot2", "MASS", "pryr", "RColorBrewer", "SHELF", "shiny", "tidyr"] + "depends": ["MASS", "RColorBrewer", "SHELF", "dplyr", "extraDistr", "ggplot2", "pryr", "shiny", "tidyr"] }, "convergEU": { "name": "convergEU", @@ -49885,6 +50413,12 @@ "sha256": "01ajzjj0ahlbv0q708hj7cw98b0dahnhkxrd79nrs1wb06rr2j9x", "depends": ["broom", "caTools", "dplyr", "eurostat", "ggplot2", "ggpubr", "leaflet", "purrr", "rlang", "rmarkdown", "stringr", "tibble", "tidyr", "tidyselect"] }, + "convertBCD": { + "name": "convertBCD", + "version": "1.0", + "sha256": "1lk87kppzr8wzbjx04grhc29srv22199c17nvch3c7pf1lw5v1nr", + "depends": ["Rmpfr", "gmp"] + }, "convertbonds": { "name": "convertbonds", "version": "0.1.0", @@ -49895,7 +50429,7 @@ "name": "convertid", "version": "0.1.8", "sha256": "0mprymgh5wbh9x6kn98q4r6c6rp2l108ddmp2g7lh9m635ys6v8m", - "depends": ["AnnotationDbi", "assertthat", "BiocFileCache", "biomaRt", "httr", "org_Hs_eg_db", "org_Mm_eg_db", "plyr", "rappdirs", "stringr", "xml2"] + "depends": ["AnnotationDbi", "BiocFileCache", "assertthat", "biomaRt", "httr", "org_Hs_eg_db", "org_Mm_eg_db", "plyr", "rappdirs", "stringr", "xml2"] }, "convertr": { "name": "convertr", @@ -49905,9 +50439,9 @@ }, "convevol": { "name": "convevol", - "version": "2.0.1", - "sha256": "12i8hgyf2d8fgzblcnrqdpz8wlb8fvczp8aqz23pndp6l7isvgyj", - "depends": ["ape", "cluster", "geiger", "MASS", "phytools"] + "version": "2.2.1", + "sha256": "0j4vbas5lhgbyia15if2hcvjldgln2017n62bs17h7z66n3ps6cv", + "depends": ["ape", "cluster", "geiger", "magick", "phytools"] }, "convey": { "name": "convey", @@ -49919,7 +50453,7 @@ "name": "convoSPAT", "version": "1.2.7", "sha256": "1pmiirigjdkrb3pzqcw6qlh6418z384mvaxqw5mrcm1gxzrqp649", - "depends": ["ellipse", "fields", "MASS", "plotrix", "StatMatch"] + "depends": ["MASS", "StatMatch", "ellipse", "fields", "plotrix"] }, "cooccur": { "name": "cooccur", @@ -49945,6 +50479,12 @@ "sha256": "1dpil57grnqn34b682fakzsrh2xghc566nhqdgnrjd7ly59v0z3x", "depends": ["cli", "clock", "glue", "htmltools", "httpuv", "jsonlite", "purrr", "rlang", "shiny", "vctrs"] }, + "cooltools": { + "name": "cooltools", + "version": "2.4", + "sha256": "1ammi354y2cbaarf29s9kjks8k0zdimcxif6crakn9p3vi30h0nk", + "depends": ["FNN", "MASS", "Rcpp", "bit64", "celestial", "cubature", "data_table", "jpeg", "plotrix", "png", "pracma", "randtoolbox", "raster", "sp"] + }, "coop": { "name": "coop", "version": "0.6-3", @@ -49961,19 +50501,19 @@ "name": "copCAR", "version": "2.0-4", "sha256": "1wvp7khp0f0x6skiq1d6npndb09ak6d6ijmx907gfrd6b0ydaklb", - "depends": ["mcmcse", "numDeriv", "Rcpp", "RcppArmadillo", "spam"] + "depends": ["Rcpp", "RcppArmadillo", "mcmcse", "numDeriv", "spam"] }, "copcor": { "name": "copcor", - "version": "2023.8-27", - "sha256": "0fs6zaxjv7ww2f35hwbdgb810cb4mcqxg260fxk3pfcfq3rwdw9a", + "version": "2024.7-31", + "sha256": "1m9a831m290q6ihxriknpbysp1694lcbb7j7knkcgnnqfkh08y5n", "depends": ["kyotil"] }, "cope": { "name": "cope", "version": "0.2.3", "sha256": "1r02nb6wy25ixhdcbqqz167s7ny3hydpxfxry5ar4136qvcamgyy", - "depends": ["abind", "fields", "maps", "MASS", "Matrix", "mvtnorm", "nlme"] + "depends": ["MASS", "Matrix", "abind", "fields", "maps", "mvtnorm", "nlme"] }, "copent": { "name": "copent", @@ -49985,7 +50525,7 @@ "name": "cophescan", "version": "1.4.1", "sha256": "0lnc20f1xaijibza4px9m47fy70jz9y9y5m7wk5h50kb4dh6ywxh", - "depends": ["coloc", "data_table", "dplyr", "ggplot2", "ggrepel", "magrittr", "matrixStats", "pheatmap", "Rcpp", "RcppArmadillo", "viridis"] + "depends": ["Rcpp", "RcppArmadillo", "coloc", "data_table", "dplyr", "ggplot2", "ggrepel", "magrittr", "matrixStats", "pheatmap", "viridis"] }, "coppeCosenzaR": { "name": "coppeCosenzaR", @@ -49997,19 +50537,19 @@ "name": "copre", "version": "0.2.1", "sha256": "1lgps3wmjp3ja13xd33q41xb3kc56vmyidjpsmm5c2y263pm1m8i", - "depends": ["abind", "BH", "dirichletprocess", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "abind", "dirichletprocess", "pracma"] }, "cops": { "name": "cops", - "version": "1.3-1", - "sha256": "17lq7ag0bwg3i7jvzca4qyzg8ixhdikrcgpgskkm26i83886zid2", - "depends": ["cmaes", "cordillera", "crs", "dfoptim", "GenSA", "MASS", "minqa", "NlcOptim", "nloptr", "pso", "rgenoud", "Rsolnp", "scatterplot3d", "smacof", "subplex"] + "version": "1.11-3", + "sha256": "04rmi45yjzll52dsdf4qci0a06v5a9kslr36c16ginkf3w64s48y", + "depends": ["GenSA", "NlcOptim", "Rsolnp", "analogue", "cmaes", "cordillera", "crs", "dfoptim", "minqa", "nloptr", "pso", "rgenoud", "smacof", "smacofx", "subplex"] }, "copula": { "name": "copula", - "version": "1.1-3", - "sha256": "19kp6q052jp0wsn2zh6wz6m9hk04nhwlc2pqwrma9ynny6s6q6cv", - "depends": ["ADGofTest", "colorspace", "gsl", "lattice", "Matrix", "mvtnorm", "numDeriv", "pcaPP", "pspline", "stabledist"] + "version": "1.1-4", + "sha256": "0kshyr77qiidcmi51dyapbdv46dkxv5n4p71vwh7cyb091zqpmzl", + "depends": ["ADGofTest", "Matrix", "colorspace", "gsl", "lattice", "mvtnorm", "numDeriv", "pcaPP", "pspline", "stabledist"] }, "copulaData": { "name": "copulaData", @@ -50045,13 +50585,13 @@ "name": "copyseparator", "version": "1.2.0", "sha256": "0dywnrqjb6x7v8icx117vsjb6zzb0brmmz1xwdc8a26lgcqmbvgv", - "depends": ["ape", "beepr", "Biostrings", "DECIPHER", "doParallel", "foreach", "kmer", "seqinr", "stringr"] + "depends": ["Biostrings", "DECIPHER", "ape", "beepr", "doParallel", "foreach", "kmer", "seqinr", "stringr"] }, "corHMM": { "name": "corHMM", "version": "2.8", "sha256": "1pxn5vx5pxrys5ql393bibfij1922pbm2v5vr0h5gcdjym0ndr6n", - "depends": ["ape", "corpcor", "expm", "GenSA", "igraph", "MASS", "nloptr", "nnet", "numDeriv", "phangorn", "phytools", "Rmpfr", "viridis"] + "depends": ["GenSA", "MASS", "Rmpfr", "ape", "corpcor", "expm", "igraph", "nloptr", "nnet", "numDeriv", "phangorn", "phytools", "viridis"] }, "corTESTsrd": { "name": "corTESTsrd", @@ -50063,7 +50603,7 @@ "name": "corTest", "version": "1.0.7", "sha256": "1gip8rxvbhrckwmjwmxbmycndg4jrl75x8qda9l35znfv9r7p0nq", - "depends": ["Biobase", "clusterGeneration", "ggplot2", "igraph", "MASS", "Matrix"] + "depends": ["Biobase", "MASS", "Matrix", "clusterGeneration", "ggplot2", "igraph"] }, "cora": { "name": "cora", @@ -50111,13 +50651,13 @@ "name": "coreNLP", "version": "0.4-3", "sha256": "0i08hrkp5slwhwnz34ndl9y37km2zmmysmm9swvvzmisihjrmb2d", - "depends": ["rJava", "XML"] + "depends": ["XML", "rJava"] }, "coreSim": { "name": "coreSim", "version": "0.2.4", "sha256": "1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "corehunter": { "name": "corehunter", @@ -50135,7 +50675,7 @@ "name": "corkscrew", "version": "1.1", "sha256": "1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s", - "depends": ["ggplot2", "gplots", "igraph", "RColorBrewer"] + "depends": ["RColorBrewer", "ggplot2", "gplots", "igraph"] }, "corlink": { "name": "corlink", @@ -50147,7 +50687,7 @@ "name": "corncob", "version": "0.4.1", "sha256": "12ah9z9f68cw40c0hw7i53263qy0yzrpvrr4kqi7xva3d18ywn4n", - "depends": ["detectseparation", "dplyr", "ggplot2", "magrittr", "numDeriv", "rlang", "scales", "trust", "VGAM"] + "depends": ["VGAM", "detectseparation", "dplyr", "ggplot2", "magrittr", "numDeriv", "rlang", "scales", "trust"] }, "cornet": { "name": "cornet", @@ -50195,13 +50735,13 @@ "name": "corporaexplorer", "version": "0.8.6", "sha256": "1d3a1dfch9fsgq0d3am3j4ygab9k1n7px3crwwr33f8n9r3vdwmp", - "depends": ["data_table", "dplyr", "ggplot2", "lubridate", "magrittr", "padr", "plyr", "RColorBrewer", "re2", "rlang", "rmarkdown", "scales", "shiny", "shinydashboard", "shinyjs", "shinyWidgets", "stringi", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "data_table", "dplyr", "ggplot2", "lubridate", "magrittr", "padr", "plyr", "re2", "rlang", "rmarkdown", "scales", "shiny", "shinyWidgets", "shinydashboard", "shinyjs", "stringi", "stringr", "tibble", "tidyr"] }, "corpustools": { "name": "corpustools", "version": "0.5.1", "sha256": "154n9gxzg9cx10sxbb05df9wsr378k2qhkprqr9cyh1q5ll1pki7", - "depends": ["data_table", "digest", "igraph", "Matrix", "pbapply", "quanteda", "R6", "Rcpp", "RcppProgress", "RNewsflow", "rsyntax", "stringi", "tokenbrowser", "udpipe", "wordcloud"] + "depends": ["Matrix", "R6", "RNewsflow", "Rcpp", "RcppProgress", "data_table", "digest", "igraph", "pbapply", "quanteda", "rsyntax", "stringi", "tokenbrowser", "udpipe", "wordcloud"] }, "corr2D": { "name": "corr2D", @@ -50215,11 +50755,17 @@ "sha256": "1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k", "depends": ["mvtnorm"] }, + "corrMCT": { + "name": "corrMCT", + "version": "0.2.0", + "sha256": "03qhvw2gcxxbv8smphd8dx5gg0zj3b50p5x5gqs3rnns1c2lqbc1", + "depends": ["Matrix", "dplyr", "glue", "magrittr", "tibble"] + }, "corrViz": { "name": "corrViz", "version": "0.1.0", "sha256": "1blwngvvh316ndfrz2gmi6gq2w08sdckqvdsn4xpzhd4q4nbff5q", - "depends": ["circlize", "DendSer", "GGally", "gganimate", "ggplot2", "ggraph", "igraph", "plotly", "purrr", "shiny", "visNetwork"] + "depends": ["DendSer", "GGally", "circlize", "gganimate", "ggplot2", "ggraph", "igraph", "plotly", "purrr", "shiny", "visNetwork"] }, "corrarray": { "name": "corrarray", @@ -50231,7 +50777,7 @@ "name": "corrcoverage", "version": "1.2.1", "sha256": "0r5n2g341jlinwrxxwxkav9i6qsf097pmfi07aiq663b13r3864x", - "depends": ["data_table", "magrittr", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "magrittr", "matrixStats"] }, "correctR": { "name": "correctR", @@ -50295,8 +50841,8 @@ }, "corrplot": { "name": "corrplot", - "version": "0.92", - "sha256": "1g98jk6xsl08z4n6sy5vriif99m31zhbz7j3dh1kfj4w7yb9zh78", + "version": "0.94", + "sha256": "1x2mgq5fnws6imywwrkshcq41qh1dmdq98kxmf6yrpwjffpmv1cf", "depends": [] }, "corrr": { @@ -50345,7 +50891,7 @@ "name": "cosimmr", "version": "1.0.12", "sha256": "1gvkzp0l8zkana78llp4r734cs12dibysh5hylafmi81byibyxyp", - "depends": ["bayesplot", "checkmate", "ggnewscale", "ggplot2", "R2jags", "Rcpp", "RcppArmadillo", "RcppDist", "reshape2", "viridis"] + "depends": ["R2jags", "Rcpp", "RcppArmadillo", "RcppDist", "bayesplot", "checkmate", "ggnewscale", "ggplot2", "reshape2", "viridis"] }, "cosinor": { "name": "cosinor", @@ -50357,7 +50903,7 @@ "name": "cosinor2", "version": "0.2.1", "sha256": "1pp0z86fflqkkllfrzx3vj98kzxjwnawr4a2d8z5q6zhq6v5qrvf", - "depends": ["cosinor", "cowplot", "ggplot2", "Hmisc", "magrittr", "matrixStats", "purrr", "scales", "stringr"] + "depends": ["Hmisc", "cosinor", "cowplot", "ggplot2", "magrittr", "matrixStats", "purrr", "scales", "stringr"] }, "cosmicsig": { "name": "cosmicsig", @@ -50375,7 +50921,7 @@ "name": "cosso", "version": "2.1-2", "sha256": "0r0gil5fk4zp33syww40va8h964zn38v0ismw0k4xsh7c8nrr8lm", - "depends": ["glmnet", "quadprog", "Rglpk"] + "depends": ["Rglpk", "glmnet", "quadprog"] }, "costat": { "name": "costat", @@ -50391,9 +50937,9 @@ }, "cotram": { "name": "cotram", - "version": "0.4-4", - "sha256": "152jxkfwcqs1k7xcr1dlqbf0jpc9423g48dxwgjy3bvqnwgi6k21", - "depends": ["alabama", "basefun", "Matrix", "mlt", "survival", "tram", "variables"] + "version": "0.5-1", + "sha256": "0ckbkhgg7026nf9xkqq3lnfi8gzb78vj4crpxms8ljxxbgv6zai1", + "depends": ["Matrix", "alabama", "basefun", "mlt", "qrng", "survival", "tram", "variables"] }, "cotrend": { "name": "cotrend", @@ -50417,19 +50963,19 @@ "name": "countSTAR", "version": "1.0.2", "sha256": "054y59r7g4g33ix020m90v8g0c09db59bd9vb7461j0il3amcs99", - "depends": ["coda", "dbarts", "FastGP", "gbm", "KFAS", "Matrix", "randomForest", "Rcpp", "RcppArmadillo", "spikeSlabGAM", "splines2", "TruncatedNormal", "truncdist"] + "depends": ["FastGP", "KFAS", "Matrix", "Rcpp", "RcppArmadillo", "TruncatedNormal", "coda", "dbarts", "gbm", "randomForest", "spikeSlabGAM", "splines2", "truncdist"] }, "countToFPKM": { "name": "countToFPKM", "version": "1.0", "sha256": "0h89knii8zkbq0lw7yn3qzak30s7bifq53ga4vy6za6hqwc53x2j", - "depends": ["circlize", "ComplexHeatmap"] + "depends": ["ComplexHeatmap", "circlize"] }, "countTransformers": { "name": "countTransformers", "version": "0.0.6", "sha256": "14n2sv7wqzslrzg0ag473ljj9mvha94161p5yh2h9l1vx7xliimf", - "depends": ["Biobase", "limma", "MASS"] + "depends": ["Biobase", "MASS", "limma"] }, "countcolors": { "name": "countcolors", @@ -50453,13 +50999,13 @@ "name": "counterfactuals", "version": "0.1.4", "sha256": "1sv7gswhwnhci07lvgvcnfvb7zav76r3576ymp704l6llhs44ybm", - "depends": ["bbotk", "checkmate", "data_table", "iml", "miesmuschel", "paradox", "R6", "StatMatch"] + "depends": ["R6", "StatMatch", "bbotk", "checkmate", "data_table", "iml", "miesmuschel", "paradox"] }, "countfitteR": { "name": "countfitteR", "version": "1.4", "sha256": "1aq7v2fy24pf3r6fkmcwvs18r2xc2l1bqablp53xfc7b6kxq3vqn", - "depends": ["ggplot2", "MASS", "pscl", "shiny"] + "depends": ["MASS", "ggplot2", "pscl", "shiny"] }, "countgmifs": { "name": "countgmifs", @@ -50471,7 +51017,7 @@ "name": "countland", "version": "0.1.2", "sha256": "1nlnri7l8v2h35r7ps8byv8mmwnir1pyimaa937wr73f1mk9m0l9", - "depends": ["ggplot2", "Matrix", "rlang"] + "depends": ["Matrix", "ggplot2", "rlang"] }, "countprop": { "name": "countprop", @@ -50501,13 +51047,13 @@ "name": "countts", "version": "0.1.0", "sha256": "11pyj5s2vyw209inapiw9pvk0s1aq3r2c1xq0dnc83sz82bxx6c4", - "depends": ["fastDummies", "ggplot2", "MASS", "matrixStats"] + "depends": ["MASS", "fastDummies", "ggplot2", "matrixStats"] }, "coursekata": { "name": "coursekata", - "version": "0.17.0", - "sha256": "0g0hz4zbqmz7rxhvnd67hx0mfqx997k27p1382j0qwqa26bv943h", - "depends": ["cli", "dslabs", "ggformula", "ggplot2", "glue", "lsr", "Metrics", "mosaic", "pak", "palmerpenguins", "purrr", "rlang", "supernova", "vctrs", "viridisLite"] + "version": "0.18.0", + "sha256": "05rqbi8sxr2fgaldg8fppil43a7pdw86wxpsgizln1bgncjpyywf", + "depends": ["Metrics", "cli", "dslabs", "ggformula", "ggplot2", "glue", "lsr", "mosaic", "palmerpenguins", "purrr", "remotes", "rlang", "supernova", "vctrs", "viridisLite"] }, "covBM": { "name": "covBM", @@ -50531,7 +51077,7 @@ "name": "covTestR", "version": "0.1.4", "sha256": "0j9kay8lwkhpdyg0fbfars1m58v0i58v1v5sm7m72s7kz8qh2yfs", - "depends": ["purrr", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "purrr", "rlang"] }, "covadap": { "name": "covadap", @@ -50549,13 +51095,13 @@ "name": "covatest", "version": "1.2.3", "sha256": "04pycgxiq3h2j70vzqac5li0iqsyg005zpqfjr9iw17y0p51jv0a", - "depends": ["gstat", "lubridate", "mathjaxr", "sp", "spacetime", "V8", "zoo"] + "depends": ["V8", "gstat", "lubridate", "mathjaxr", "sp", "spacetime", "zoo"] }, "covdepGE": { "name": "covdepGE", "version": "1.0.1", "sha256": "0xlz01h6lnp7g9vi9s84l8cmgqvr4pql1fs0c1n51gsx4pkaz5l1", - "depends": ["doParallel", "foreach", "ggplot2", "glmnet", "latex2exp", "MASS", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "ggplot2", "glmnet", "latex2exp", "reshape2"] }, "coveR2": { "name": "coveR2", @@ -50573,7 +51119,7 @@ "name": "covequal", "version": "0.1.0", "sha256": "1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c", - "depends": ["corpcor", "RMTstat"] + "depends": ["RMTstat", "corpcor"] }, "covfefe": { "name": "covfefe", @@ -50591,7 +51137,7 @@ "name": "covid19.analytics", "version": "2.1.3.3", "sha256": "009cqf1xnhkw11vi1z0c0zm8ld3ifgricn0rlik5gycvz8ygwprn", - "depends": ["ape", "collapsibleTree", "curl", "deSolve", "dplyr", "DT", "gplots", "htmlwidgets", "pheatmap", "plotly", "readxl", "rentrez", "shiny", "shinycssloaders", "shinydashboard"] + "depends": ["DT", "ape", "collapsibleTree", "curl", "deSolve", "dplyr", "gplots", "htmlwidgets", "pheatmap", "plotly", "readxl", "rentrez", "shiny", "shinycssloaders", "shinydashboard"] }, "covid19br": { "name": "covid19br", @@ -50621,7 +51167,7 @@ "name": "covid19india", "version": "0.1.4", "sha256": "18xjgal49rhwif07irb1ad0qvi6c2p1ya52knx0wspb56fv849z1", - "depends": ["cli", "data_table", "EpiEstim", "glue", "gt", "httr", "janitor", "magrittr", "scales", "stringr"] + "depends": ["EpiEstim", "cli", "data_table", "glue", "gt", "httr", "janitor", "magrittr", "scales", "stringr"] }, "covid19italy": { "name": "covid19italy", @@ -50663,13 +51209,13 @@ "name": "covidcast", "version": "0.5.2", "sha256": "0d4x3cydjng0f0gzn8fly44hf2viypym6ag7mzwips7791rhcm6k", - "depends": ["dplyr", "ggplot2", "httr", "MMWRweek", "purrr", "rlang", "sf", "tidyr", "xml2"] + "depends": ["MMWRweek", "dplyr", "ggplot2", "httr", "purrr", "rlang", "sf", "tidyr", "xml2"] }, "covidmx": { "name": "covidmx", "version": "0.7.7", "sha256": "1m73pxpn080w7sby88spz2pfjw1v479m9fa74ag25mkdymfbh02d", - "depends": ["cli", "DBI", "dplyr", "duckdb", "fs", "pins", "RCurl", "readr", "readxl", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["DBI", "RCurl", "cli", "dplyr", "duckdb", "fs", "pins", "readr", "readxl", "rlang", "stringr", "tibble", "tidyr"] }, "covidnor": { "name": "covidnor", @@ -50705,7 +51251,13 @@ "name": "covsim", "version": "1.1.0", "sha256": "0pk6jfh7bcpqm63zdlrkz1cqdgwwkkdjlflw8yb8fq6p25bmppih", - "depends": ["lavaan", "MASS", "Matrix", "nleqslv", "PearsonDS", "rvinecopulib", "tmvtnorm"] + "depends": ["MASS", "Matrix", "PearsonDS", "lavaan", "nleqslv", "rvinecopulib", "tmvtnorm"] + }, + "covtracer": { + "name": "covtracer", + "version": "0.0.1", + "sha256": "1ndps8hmj8qpd4wl9p14ahr8n62rlgb2psvncfjmxs26p8dx90r3", + "depends": [] }, "cowbell": { "name": "cowbell", @@ -50729,7 +51281,7 @@ "name": "coxed", "version": "0.3.3", "sha256": "09jnqza8wp2palayb0vsz43qmh8470gxil1l7g3b65lmxa7wpmnh", - "depends": ["dplyr", "ggplot2", "gridExtra", "mediation", "mgcv", "PermAlgo", "rms", "survival", "tidyr"] + "depends": ["PermAlgo", "dplyr", "ggplot2", "gridExtra", "mediation", "mgcv", "rms", "survival", "tidyr"] }, "coxerr": { "name": "coxerr", @@ -50741,7 +51293,7 @@ "name": "coxme", "version": "2.2-20", "sha256": "0qnbhywav7xhs6r3f6m4lb1pvw8gfylnrll0zss5h578mgdfmvm0", - "depends": ["bdsmatrix", "Matrix", "nlme", "survival"] + "depends": ["Matrix", "bdsmatrix", "nlme", "survival"] }, "coxphSGD": { "name": "coxphSGD", @@ -50771,7 +51323,7 @@ "name": "coxrt", "version": "1.0.3", "sha256": "1xggczjx5psl4m4m83vh4y6swnh3pf9rngnzx3268iznfz1g43h2", - "depends": ["BB", "ggplot2", "gss", "inline", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["BB", "Rcpp", "RcppArmadillo", "ggplot2", "gss", "inline", "survival"] }, "coxsei": { "name": "coxsei", @@ -50783,7 +51335,7 @@ "name": "cp4p", "version": "0.3.6", "sha256": "1zddkkj0ynvfck3kw1682wffbxw0d3dc4flmxxp03lclq70fc8bd", - "depends": ["limma", "MESS", "multtest", "qvalue"] + "depends": ["MESS", "limma", "multtest", "qvalue"] }, "cpa": { "name": "cpa", @@ -50795,7 +51347,7 @@ "name": "cpd", "version": "0.3.2", "sha256": "049df4ip3x7v9zviw7b4m1hp2w4gpfi6cq066mqal41frgvfmwdb", - "depends": ["dgof", "hypergeo", "Rdpack"] + "depends": ["Rdpack", "dgof", "hypergeo"] }, "cpfa": { "name": "cpfa", @@ -50813,7 +51365,7 @@ "name": "cplm", "version": "0.7-12", "sha256": "1m0b0jksl1y90q4sdhjspby4hafxxdgra8sbicd5rsrwq4hzwyxc", - "depends": ["biglm", "coda", "ggplot2", "Matrix", "minqa", "nlme", "reshape2", "statmod", "tweedie"] + "depends": ["Matrix", "biglm", "coda", "ggplot2", "minqa", "nlme", "reshape2", "statmod", "tweedie"] }, "cplots": { "name": "cplots", @@ -50831,7 +51383,7 @@ "name": "cpmBigData", "version": "0.0.1", "sha256": "0fdch6hj6l620gj0pk8ffrl9j2rmd9jlin7yx7myfy46qij1cxpi", - "depends": ["benchmarkme", "doParallel", "foreach", "Hmisc", "iterators", "rms", "SparseM"] + "depends": ["Hmisc", "SparseM", "benchmarkme", "doParallel", "foreach", "iterators", "rms"] }, "cpmr": { "name": "cpmr", @@ -50843,7 +51395,7 @@ "name": "cpop", "version": "1.0.7", "sha256": "082ny87ph3wz5kbp2i4yzf9g6r3bihbgfynv060fy6sv0xb9hxc1", - "depends": ["crops", "ggplot2", "mathjaxr", "pacman", "pracma", "Rcpp", "Rdpack"] + "depends": ["Rcpp", "Rdpack", "crops", "ggplot2", "mathjaxr", "pacman", "pracma"] }, "cpp11": { "name": "cpp11", @@ -50853,21 +51405,21 @@ }, "cpp11armadillo": { "name": "cpp11armadillo", - "version": "0.2.5", - "sha256": "1bn72wwlj6k9lg36ah4r69jgpqsvlcmkzn6czwz10dgi341ca5sx", + "version": "0.2.8", + "sha256": "1hn7yksy6rhb9kmykf2w677555zbxdwxpzasi1g3mp3riqssabib", "depends": [] }, "cppRouting": { "name": "cppRouting", "version": "3.1", "sha256": "1mhp6k2kwlhyrswlxi9f0f6ndvm5968ljp3k97c2m2sfbxaablxy", - "depends": ["data_table", "Rcpp", "RcppParallel", "RcppProgress"] + "depends": ["Rcpp", "RcppParallel", "RcppProgress", "data_table"] }, "cppcheckR": { "name": "cppcheckR", "version": "1.0.0", "sha256": "1f3b8gadpiyxwxp34pd3i7s715dkm23427fp86vvnqvy9schg3ga", - "depends": ["htmlwidgets", "rmarkdown", "rstudioapi", "shiny", "V8", "xml2"] + "depends": ["V8", "htmlwidgets", "rmarkdown", "rstudioapi", "shiny", "xml2"] }, "cppdoubles": { "name": "cppdoubles", @@ -50879,7 +51431,7 @@ "name": "cpr", "version": "0.4.0", "sha256": "1vv7cmjf08accdpp5qjw9rad8yb9izc6bw440366ckh4q87306q4", - "depends": ["ggplot2", "lme4", "plot3D", "Rcpp", "RcppArmadillo", "rgl", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "lme4", "plot3D", "rgl", "scales"] }, "cprobit": { "name": "cprobit", @@ -50903,7 +51455,7 @@ "name": "cpss", "version": "0.0.3", "sha256": "1j8hyhfkjwyq6nmfynlzl8q7n5irlzrqdqh83v7pfpizzjdhhfxq", - "depends": ["dplyr", "ggplot2", "gridExtra", "magrittr", "mvtnorm", "Rcpp", "RcppArmadillo", "Rfast", "rlang", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "Rfast", "dplyr", "ggplot2", "gridExtra", "magrittr", "mvtnorm", "rlang", "tibble", "tidyr"] }, "cpsurvsim": { "name": "cpsurvsim", @@ -50921,7 +51473,7 @@ "name": "cpt", "version": "1.0.2", "sha256": "0j9ns8qhcvwxnzl9rc59vmh5jdahnni5dxpmi38gxvvj5k9hd8p7", - "depends": ["glmnet", "MASS", "nnet", "randomForest"] + "depends": ["MASS", "glmnet", "nnet", "randomForest"] }, "cptcity": { "name": "cptcity", @@ -50933,7 +51485,7 @@ "name": "cqrReg", "version": "1.2.1", "sha256": "1788hnm1qd5mv5bcizz2h170jg6954sfggjnfqcwfwg167px0df2", - "depends": ["quantreg", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "quantreg"] }, "cquad": { "name": "cquad", @@ -50951,13 +51503,13 @@ "name": "cramer", "version": "0.9-4", "sha256": "0i5qg912rp8m1br00kd3iidy1v1yrmzj21xmy2wbjyyqrzakykc3", - "depends": ["boot", "Rcpp"] + "depends": ["Rcpp", "boot"] }, "crandep": { "name": "crandep", - "version": "0.3.9", - "sha256": "0g807ph2fnpg6ll4li0pgw7gd61wzyibjnl74dzl1jaq7n1ymh2h", - "depends": ["dplyr", "gsl", "igraph", "pracma", "Rcpp", "RcppArmadillo", "rvest", "stringr", "xml2"] + "version": "0.3.10", + "sha256": "07y5gkxdr12v715zy9skgjhw3sjsjlscpfril4hcdz0qwhr5cy5d", + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "gsl", "igraph", "pracma", "stringr"] }, "crank": { "name": "crank", @@ -50969,7 +51521,7 @@ "name": "cranlike", "version": "1.0.3", "sha256": "022kya5p0f92szpw751czjka7bzq297af4i2l33892yfxkapfqfg", - "depends": ["DBI", "debugme", "desc", "RSQLite"] + "depends": ["DBI", "RSQLite", "debugme", "desc"] }, "cranlogs": { "name": "cranlogs", @@ -50993,12 +51545,12 @@ "name": "crawl", "version": "2.3.0", "sha256": "0qn64n54lsj56r5xj7xk8irns95724zmdv0nscsm3jd06fqybgj4", - "depends": ["dplyr", "lubridate", "magrittr", "mvtnorm", "purrr", "Rcpp", "RcppArmadillo", "rlang", "sf", "sp", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "lubridate", "magrittr", "mvtnorm", "purrr", "rlang", "sf", "sp", "tibble"] }, "crayon": { "name": "crayon", - "version": "1.5.2", - "sha256": "0yjsnhifr3nipaid0q11jjglvqmp51g9d2xdh9kfxh5knl2sbabh", + "version": "1.5.3", + "sha256": "0sfsx4k77fsx1dx9c186dg273psrr3awz4ivfvmbbvs1amla0x1y", "depends": [] }, "crayons": { @@ -51023,7 +51575,7 @@ "name": "crctStepdown", "version": "0.5.2", "sha256": "0jjskjr3nwxsg6fz317nyb0r6vj1m82adlc06pyhazyhb7hh1gzl", - "depends": ["fastglm", "ggplot2", "ggpubr", "lme4", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "stringr"] + "depends": ["Rcpp", "RcppEigen", "RcppParallel", "fastglm", "ggplot2", "ggpubr", "lme4", "reshape2", "stringr"] }, "createLogicalPCM": { "name": "createLogicalPCM", @@ -51063,27 +51615,27 @@ }, "crew": { "name": "crew", - "version": "0.9.3", - "sha256": "0ap2yf86ng8wp8n2cm0br4q81pknswsynb4a1qprsshwr8l5xvl1", - "depends": ["cli", "data_table", "getip", "later", "mirai", "nanonext", "processx", "promises", "ps", "R6", "rlang", "tibble", "tidyselect"] + "version": "0.9.5", + "sha256": "1js1znvvp650v8zpsh0vy58m5plylhq5h4x26pijk3vr6w3bl7q2", + "depends": ["R6", "cli", "data_table", "getip", "later", "mirai", "nanonext", "processx", "promises", "ps", "rlang", "tibble", "tidyselect"] }, "crew_aws_batch": { "name": "crew.aws.batch", - "version": "0.0.5", - "sha256": "1gssnvmszq89cfprwrgiq1gajf9q2s8kdj03gbza194p4646lj6p", - "depends": ["cli", "crew", "paws_common", "paws_compute", "paws_management", "R6", "rlang", "tibble"] + "version": "0.0.6", + "sha256": "06q06jc53w0yh91vs45r8g9q13avcfi6s30h2bwqbdsqsx6rk54r", + "depends": ["R6", "cli", "crew", "paws_common", "paws_compute", "paws_management", "rlang", "tibble"] }, "crew_cluster": { "name": "crew.cluster", - "version": "0.3.1", - "sha256": "1qn3pxyhfyb47cgyzmw2l07dhpvbf0yicxxbxh82scmlj5pqbkhf", - "depends": ["crew", "lifecycle", "ps", "R6", "rlang", "vctrs", "xml2", "yaml"] + "version": "0.3.2", + "sha256": "1n40rl1z64ig7jp637xrydnvzmpjad76xsd2avhb8nkbcima89f8", + "depends": ["R6", "crew", "lifecycle", "ps", "rlang", "vctrs", "xml2", "yaml"] }, "crfsuite": { "name": "crfsuite", "version": "0.4.2", "sha256": "15ldbx8g9xa6sql6is2gcqryzqb9dad1hiarvrgmizdp5fd3gxnm", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "cricketdata": { "name": "cricketdata", @@ -51095,7 +51647,7 @@ "name": "cricketr", "version": "0.0.26", "sha256": "1y1zf9f59v95knggq5nna5rp7fqpv1swwvkajwqbpicc12g2azq4", - "depends": ["dplyr", "forecast", "ggplot2", "httr", "lubridate", "plotrix", "scatterplot3d", "XML"] + "depends": ["XML", "dplyr", "forecast", "ggplot2", "httr", "lubridate", "plotrix", "scatterplot3d"] }, "crimCV": { "name": "crimCV", @@ -51125,7 +51677,7 @@ "name": "crispRdesignR", "version": "1.1.7", "sha256": "0z0sc0plq6x68b70pprzr7p7wpv8zsvg9ygi0gv1djh5j4wiaiz1", - "depends": ["BiocGenerics", "Biostrings", "DT", "gbm", "GenomeInfoDb", "GenomicRanges", "IRanges", "rtracklayer", "S4Vectors", "shiny", "stringr", "vtreat"] + "depends": ["BiocGenerics", "Biostrings", "DT", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "gbm", "rtracklayer", "shiny", "stringr", "vtreat"] }, "criticality": { "name": "criticality", @@ -51137,7 +51689,7 @@ "name": "criticalpath", "version": "0.2.1", "sha256": "1b8iwvdlq5czd7p7yy6il3irrcarc23cy26vprycnyjll38lcfjz", - "depends": ["dplyr", "igraph", "magrittr", "R6", "stringr", "tibble"] + "depends": ["R6", "dplyr", "igraph", "magrittr", "stringr", "tibble"] }, "critpath": { "name": "critpath", @@ -51153,9 +51705,9 @@ }, "crmPack": { "name": "crmPack", - "version": "1.0.5", - "sha256": "086r12vfp1am7aavmq5yvbgg4w7vjdabjvzlnd5la92y01dcs32h", - "depends": ["GenSA", "ggplot2", "gridExtra", "MASS", "mvtnorm", "rjags"] + "version": "1.0.6", + "sha256": "1wdar6i0h184ynddvl2w6ipbdappncl0grsw7g4hnfiz1hw9x9p4", + "depends": ["GenSA", "MASS", "ggplot2", "gridExtra", "mvtnorm", "rjags"] }, "crmReg": { "name": "crmReg", @@ -51179,7 +51731,7 @@ "name": "cromwellDashboard", "version": "0.5.1", "sha256": "0d57c1wdd1ds9fr7p256la63qbv8mirljgrvl1k8fp5gcnkps5wb", - "depends": ["dplyr", "DT", "httr", "shiny", "shinydashboard", "stringr"] + "depends": ["DT", "dplyr", "httr", "shiny", "shinydashboard", "stringr"] }, "cronR": { "name": "cronR", @@ -51239,7 +51791,7 @@ "name": "crops", "version": "1.0.3", "sha256": "0c1xvfnr4dh720x0i3f6nvmzgv8zbs7cvp8vfa341yb92pz4d6s0", - "depends": ["cowplot", "ggplot2", "magrittr", "memoise", "Rdpack", "reshape", "sets", "tibble", "tidyverse"] + "depends": ["Rdpack", "cowplot", "ggplot2", "magrittr", "memoise", "reshape", "sets", "tibble", "tidyverse"] }, "crossdes": { "name": "crossdes", @@ -51265,6 +51817,12 @@ "sha256": "079ibxhm6877nfdqf88fhg9fjdn3vbs44jprrbhxmmbbd30nma4v", "depends": ["backports", "cli", "dplyr", "generics", "lifecycle", "purrr", "rlang", "vctrs"] }, + "crossmatch": { + "name": "crossmatch", + "version": "1.4-0", + "sha256": "104qbc8p9ip446035xilgswhqfdvrqxqh5sirp6sc2rvy6lr1xng", + "depends": ["nbpMatching"] + }, "crossnma": { "name": "crossnma", "version": "1.2.0", @@ -51287,19 +51845,19 @@ "name": "crosstalk", "version": "1.2.1", "sha256": "1w8lc3hcd1nlw541880vs3agk2i6bilyapnq9lcs3mfn2s2g0338", - "depends": ["htmltools", "jsonlite", "lazyeval", "R6"] + "depends": ["R6", "htmltools", "jsonlite", "lazyeval"] }, "crosstalkr": { "name": "crosstalkr", "version": "1.0.5", "sha256": "1p4grkh6kripkpirs2hrqwv4bz61bcr6pqzj88j75311kjiphnl0", - "depends": ["doParallel", "dplyr", "ensembldb", "foreach", "ggplot2", "igraph", "iterators", "magrittr", "Matrix", "Rcpp", "readr", "rlang", "STRINGdb", "stringr", "tibble", "tidyr", "withr"] + "depends": ["Matrix", "Rcpp", "STRINGdb", "doParallel", "dplyr", "ensembldb", "foreach", "ggplot2", "igraph", "iterators", "magrittr", "readr", "rlang", "stringr", "tibble", "tidyr", "withr"] }, "crossurr": { "name": "crossurr", "version": "1.1.1", "sha256": "1g4nr9x93ykq6qy5236vydkcbjyfzdz81kwgjv7mph3m0b862rdw", - "depends": ["dplyr", "gbm", "glmnet", "glue", "pbapply", "purrr", "ranger", "RCAL", "rlang", "SIS", "SuperLearner", "tibble", "tidyr"] + "depends": ["RCAL", "SIS", "SuperLearner", "dplyr", "gbm", "glmnet", "glue", "pbapply", "purrr", "ranger", "rlang", "tibble", "tidyr"] }, "crossval": { "name": "crossval", @@ -51323,13 +51881,13 @@ "name": "crossword.r", "version": "0.3.6", "sha256": "1s31613s4qxxspka9bhgq3rq8xraf48mwfv6phvz6v06gijh64lr", - "depends": ["dplyr", "jsonlite", "magrittr", "R6", "r6extended", "stringr"] + "depends": ["R6", "dplyr", "jsonlite", "magrittr", "r6extended", "stringr"] }, "crov": { "name": "crov", "version": "0.3.0", "sha256": "1vnhnw6rw8qyhahy6d67cq5m9sxr6yic21qi16vic1q5115fwx01", - "depends": ["gtools", "VGAM"] + "depends": ["VGAM", "gtools"] }, "crplyr": { "name": "crplyr", @@ -51341,7 +51899,7 @@ "name": "crqa", "version": "2.0.6", "sha256": "117sxxil4yzqss7b8d5r7y2grpc6nzcli9mrjaarsk10k95c4bwp", - "depends": ["dplyr", "ggplot2", "gplots", "Matrix", "pracma", "rdist", "tseriesChaos"] + "depends": ["Matrix", "dplyr", "ggplot2", "gplots", "pracma", "rdist", "tseriesChaos"] }, "crrSC": { "name": "crrSC", @@ -51403,11 +51961,17 @@ "sha256": "044llamxlrva5va39yzpvsmdjqn56ij7jjll73mmjg7ka0rqc5dj", "depends": ["dplyr", "mapview", "purrr", "sf", "units"] }, + "crt2power": { + "name": "crt2power", + "version": "1.0.0", + "sha256": "00clnxyf381qhjpv8r7z0ff9jmid027izvmkpzijmx2d31mm3cr1", + "depends": ["devtools", "dplyr", "foreach", "knitr", "mvtnorm", "rootSolve", "tableone", "tibble", "tidyr", "tidyverse"] + }, "crul": { "name": "crul", - "version": "1.4.2", - "sha256": "0is164bbdk5zy1gxrliiqzlmj47nvzsjym05ijzzs3zkj7qpfp20", - "depends": ["curl", "httpcode", "jsonlite", "mime", "R6", "urltools"] + "version": "1.5.0", + "sha256": "17dx3qhdssk0zanp73g0d7h3imhwh9ydzs009fbrspw1s9w3fwyv", + "depends": ["R6", "curl", "httpcode", "jsonlite", "mime", "urltools"] }, "crunch": { "name": "crunch", @@ -51431,7 +51995,7 @@ "name": "crwbmetareg", "version": "1.0", "sha256": "0faksz2hp1ya4j9hlpc091b1mgwz6396fc15f4f20fixcidv1jg8", - "depends": ["lmtest", "Rfast2", "sandwich"] + "depends": ["Rfast2", "lmtest", "sandwich"] }, "cry": { "name": "cry", @@ -51441,15 +52005,15 @@ }, "crypto2": { "name": "crypto2", - "version": "2.0.0", - "sha256": "0jj6ld4xy1dxc7g317dfjd46vrpbiayskcnvhmapr0rnga60c78r", + "version": "2.0.1", + "sha256": "00ab8hnmfpw6r1q4ifylyga51ilij33p6g56xv5kh74w9g5slplw", "depends": ["base64enc", "cli", "dplyr", "janitor", "jsonlite", "lubridate", "plyr", "progress", "purrr", "tibble", "tidyr"] }, "cryptoQuotes": { "name": "cryptoQuotes", "version": "1.3.1", "sha256": "0fyhnba1h3vf802rab96hch6gdkggz040yvfry9ya2i74xl972pi", - "depends": ["cli", "curl", "jsonlite", "lifecycle", "plotly", "TTR", "xts", "zoo"] + "depends": ["TTR", "cli", "curl", "jsonlite", "lifecycle", "plotly", "xts", "zoo"] }, "cryptography": { "name": "cryptography", @@ -51491,13 +52055,13 @@ "name": "csa", "version": "0.7.1", "sha256": "1mjvyl1l80xxyj1nafjgl6jhclyahybi47zxcrkpb78ldiwsf1hl", - "depends": ["data_table", "doParallel", "foreach", "ggplot2", "ggpubr", "Lmoments", "moments", "raster", "reshape2", "scales"] + "depends": ["Lmoments", "data_table", "doParallel", "foreach", "ggplot2", "ggpubr", "moments", "raster", "reshape2", "scales"] }, "csalert": { "name": "csalert", - "version": "2023.6.17", - "sha256": "004rsqf912f9ladp9kvx26fhmkna61cxlgjfzmlxzirm1h2iw1vs", - "depends": ["cstidy", "cstime", "data_table", "ggplot2", "glm2", "magrittr", "stringr"] + "version": "2024.6.24", + "sha256": "0ahafz39x8zh4yrwhjkbv2fwvz1vpckksj935k9g18ympdg4nnyz", + "depends": ["cstidy", "cstime", "data_table", "ggplot2", "glm2", "lubridate", "magrittr", "stringr", "surveillance"] }, "csampling": { "name": "csampling", @@ -51533,7 +52097,7 @@ "name": "csmpv", "version": "1.0.3", "sha256": "13b7i4ri0a3cjnhn14m72rff4gxxda556h38gjwp900mnjaqrwbj", - "depends": ["forestmodel", "ggplot2", "ggpubr", "glmnet", "Hmisc", "Matrix", "rms", "scales", "survival", "survminer", "xgboost"] + "depends": ["Hmisc", "Matrix", "forestmodel", "ggplot2", "ggpubr", "glmnet", "rms", "scales", "survival", "survminer", "xgboost"] }, "csn": { "name": "csn", @@ -51545,7 +52109,7 @@ "name": "csodata", "version": "1.5.0", "sha256": "11sgkf6xy3wh73yqhcjcpif9w73026rmiwm5vcgm21fg9fl4hyfk", - "depends": ["dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "R_cache", "reshape2", "rjstat", "sf", "tidyr"] + "depends": ["R_cache", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "reshape2", "rjstat", "sf", "tidyr"] }, "cspec": { "name": "cspec", @@ -51565,11 +52129,17 @@ "sha256": "1q9a11v512dc96lrrd03w06s8x6c1a0j4z5x8qvq48f4q7k30l1r", "depends": [] }, + "csquares": { + "name": "csquares", + "version": "0.0.7", + "sha256": "0ah6w153vawv4047196rcwpd1vrs8czya8pl1pmxdqm2kn0g7f9x", + "depends": ["dplyr", "purrr", "rlang", "sf", "stars", "stringr", "tidyr", "tidyselect", "vctrs"] + }, "csranks": { "name": "csranks", "version": "1.2.2", "sha256": "0rnwgi7446cz54lsgpnl6j6qdd4hfcwhcvvbks2hxyq5a0hr3gh3", - "depends": ["cli", "ggplot2", "lifecycle", "MASS", "scales"] + "depends": ["MASS", "cli", "ggplot2", "lifecycle", "scales"] }, "cssTools": { "name": "cssTools", @@ -51581,7 +52151,7 @@ "name": "cstab", "version": "0.2-2", "sha256": "1lr401fvi88f4jv8jh4brx95ymncfw8clripz1r6a46inj80nj4j", - "depends": ["cluster", "fastcluster", "Rcpp"] + "depends": ["Rcpp", "cluster", "fastcluster"] }, "cstidy": { "name": "cstidy", @@ -51599,7 +52169,7 @@ "name": "csurvey", "version": "1.9", "sha256": "0g41mh332imf03xwxpa3ghmi8dmdpva8wb1z794as3gp5hjddsh5", - "depends": ["cgam", "coneproj", "igraph", "MASS", "Matrix", "purrr", "survey"] + "depends": ["MASS", "Matrix", "cgam", "coneproj", "igraph", "purrr", "survey"] }, "csutil": { "name": "csutil", @@ -51663,9 +52233,9 @@ }, "cthist": { "name": "cthist", - "version": "2.1.9", - "sha256": "0gdni6jfqq4k4w5b42va0hm7fc1k8v8b3imlip6fn9kni388a2xl", - "depends": ["assertthat", "dplyr", "httr", "jsonlite", "magrittr", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr"] + "version": "2.1.11", + "sha256": "01d5fkc15k96bp3ymvxlf27789d4wl1913w0vlshq0sdaknsq1xy", + "depends": ["assertthat", "dplyr", "httr", "jsonlite", "lubridate", "magrittr", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr"] }, "cthreshER": { "name": "cthreshER", @@ -51683,25 +52253,25 @@ "name": "ctmcd", "version": "1.4.4", "sha256": "0w0dhxw9qdh7p59d4xkm3h5zhmvawgy9lsw84nh9vphrqrzbfghm", - "depends": ["coda", "expm", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "expm", "numDeriv"] }, "ctmcmove": { "name": "ctmcmove", "version": "1.2.9", "sha256": "1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0", - "depends": ["fda", "gdistance", "Matrix", "raster", "sp"] + "depends": ["Matrix", "fda", "gdistance", "raster", "sp"] }, "ctmle": { "name": "ctmle", "version": "0.1.2", "sha256": "0qc1ji8fjpr88dn6mrpijfcx1ij4zkrxsbcw405hxal7rli0gyp3", - "depends": ["glmnet", "SuperLearner", "tmle"] + "depends": ["SuperLearner", "glmnet", "tmle"] }, "ctmm": { "name": "ctmm", "version": "1.2.0", "sha256": "0fmihi6ihk4jgg0abyhlfhg4wx91sq06xr11dc0vbhcyaq2090r4", - "depends": ["Bessel", "data_table", "digest", "expm", "fasttime", "Gmedian", "gsl", "manipulate", "MASS", "numDeriv", "parsedate", "pbivnorm", "pracma", "raster", "sf", "shape", "sp", "statmod", "terra"] + "depends": ["Bessel", "Gmedian", "MASS", "data_table", "digest", "expm", "fasttime", "gsl", "manipulate", "numDeriv", "parsedate", "pbivnorm", "pracma", "raster", "sf", "shape", "sp", "statmod", "terra"] }, "ctmva": { "name": "ctmva", @@ -51713,7 +52283,7 @@ "name": "ctpm", "version": "1.0.1", "sha256": "1bycdh3mbimmfvv3yb50c8rwcmkbjj0jwnfiynsp2h56y3dmzc1r", - "depends": ["ape", "ClusterR", "ctmm", "slouch"] + "depends": ["ClusterR", "ape", "ctmm", "slouch"] }, "ctqr": { "name": "ctqr", @@ -51723,15 +52293,15 @@ }, "ctrdata": { "name": "ctrdata", - "version": "1.18.0", - "sha256": "01y4cf4cwnsaykdbakq68bfrargn9ai492jcbq023d0w9hv78r0b", - "depends": ["clipr", "curl", "digest", "dplyr", "httr", "jqr", "jsonlite", "lubridate", "nodbi", "readr", "stringi", "tibble", "V8", "xml2", "zip"] + "version": "1.19.1", + "sha256": "0w0bl39lgkb7fqvm3mg3b45kak1kjfjy2ghq31gwymyx41vh220v", + "depends": ["V8", "clipr", "countrycode", "curl", "digest", "dplyr", "httr", "jqr", "jsonlite", "lubridate", "nodbi", "readr", "stringi", "tibble", "xml2", "zip"] }, "ctrialsgov": { "name": "ctrialsgov", "version": "0.2.5", "sha256": "0hdh1fdfaja8amf7fkvk1c6yif703132bvacq0j9pk5jr97czgpw", - "depends": ["DBI", "dplyr", "ggplot2", "htmlwidgets", "lubridate", "Matrix", "plotly", "purrr", "rlang", "stringi", "tibble"] + "depends": ["DBI", "Matrix", "dplyr", "ggplot2", "htmlwidgets", "lubridate", "plotly", "purrr", "rlang", "stringi", "tibble"] }, "ctrlGene": { "name": "ctrlGene", @@ -51743,19 +52313,19 @@ "name": "ctsem", "version": "3.10.0", "sha256": "10ip34y03jiidwcmqlvhb4sw0f0972l3pkx694whr1dlnlb57yjr", - "depends": ["BH", "cOde", "data_table", "Deriv", "expm", "ggplot2", "MASS", "Matrix", "mize", "mvtnorm", "plyr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "statmod", "tibble"] + "depends": ["BH", "Deriv", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cOde", "data_table", "expm", "ggplot2", "mize", "mvtnorm", "plyr", "rstan", "rstantools", "statmod", "tibble"] }, "ctsemOMX": { "name": "ctsemOMX", "version": "1.0.6", "sha256": "1vr7zpxfhwzj8v54dzgk42hvjb4433y9r8al9069prkrvlv74gx8", - "depends": ["ctsem", "Matrix", "OpenMx", "plyr"] + "depends": ["Matrix", "OpenMx", "ctsem", "plyr"] }, "ctsfeatures": { "name": "ctsfeatures", "version": "1.2.2", "sha256": "0nmqx56mbmanq6y3msdkii144srgxvyl0lzwhixm719xhjii39w3", - "depends": ["astsa", "Bolstad2", "ggplot2", "latex2exp", "Rdpack", "tsibble"] + "depends": ["Bolstad2", "Rdpack", "astsa", "ggplot2", "latex2exp", "tsibble"] }, "ctv": { "name": "ctv", @@ -51763,6 +52333,12 @@ "sha256": "1mr37p7mdv2p8rswz9clwj25ipm16pc4a7flwg3a4bgyj1n5mz55", "depends": [] }, + "ctxR": { + "name": "ctxR", + "version": "1.0.0", + "sha256": "1m3hj5cwghm7nx9s5z3j6yby2i04ykich213x6j0gps4n4c8zanr", + "depends": ["cli", "data_table", "httr", "jsonlite", "purrr", "rlang", "stringr", "tibble", "tidyr", "urltools"] + }, "cuRe": { "name": "cuRe", "version": "1.1.1", @@ -51771,20 +52347,20 @@ }, "cubar": { "name": "cubar", - "version": "0.5.0", - "sha256": "12rqg50v7f0akd5d698lmf0vg1gg84lx9wjv7wvfikbyhpqk9wq6", - "depends": ["Biostrings", "data_table", "ggplot2", "IRanges", "rlang"] + "version": "1.0.0", + "sha256": "1hggjq1p6xcffvr13pxjc4345gzrbaxppryn6ijf2b56ffzy7xgx", + "depends": ["Biostrings", "IRanges", "data_table", "ggplot2", "rlang"] }, "cubature": { "name": "cubature", - "version": "2.1.0", - "sha256": "0r9n4xpm3ssjn3vywzlgh3naynzp1cxvjsd0pvah04k115b7i0jx", + "version": "2.1.1", + "sha256": "1156gv8ca3k034f34h50g0a4dg65dpv9d676i7h11rpl6gkj0wmk", "depends": ["Rcpp"] }, "cubble": { "name": "cubble", - "version": "0.3.0", - "sha256": "0jjdz7yi58h2rvwbanzq4nq9lrbx4dcb03l1qlfkbqamn4s4hz5v", + "version": "0.3.2", + "sha256": "1nbamkzzlzabgq41szc4kp1q58sirq0gp0x95wv1idax37p4gh9i", "depends": ["cli", "dplyr", "ggplot2", "glue", "lubridate", "ncdf4", "rlang", "sf", "stringr", "tibble", "tidyr", "tidyselect", "tsibble", "vctrs"] }, "cubelyr": { @@ -51819,21 +52395,21 @@ }, "cucumber": { "name": "cucumber", - "version": "1.0.3", - "sha256": "1drdx59pzm8fwmp1hjliq21ba16jahlx5f0ban5qgig0xni3vz8y", + "version": "1.0.4", + "sha256": "0wgj0pb0h4f1n6gaml0hgbxs5pdwq6dhlmc40nk80zh95shfbhj6", "depends": ["checkmate", "dplyr", "fs", "glue", "purrr", "rlang", "stringr", "testthat", "tibble", "withr"] }, "cuda_ml": { "name": "cuda.ml", "version": "0.3.2", "sha256": "0vqmy8qs3234gllpymvnf2x4a5g9rcmn9ja8cvccksvx6bh10mgz", - "depends": ["ellipsis", "hardhat", "parsnip", "Rcpp", "rlang"] + "depends": ["Rcpp", "ellipsis", "hardhat", "parsnip", "rlang"] }, "cultevo": { "name": "cultevo", "version": "1.0.2", "sha256": "0rmncp4mrdpf3izhhqn9406i36j3d3d7i8cglip04lkfbypl9jvy", - "depends": ["combinat", "Hmisc", "pspearman", "stringi"] + "depends": ["Hmisc", "combinat", "pspearman", "stringi"] }, "cumSeg": { "name": "cumSeg", @@ -51935,13 +52511,13 @@ "name": "curvHDR", "version": "1.2-2", "sha256": "05i4q6lrzm23nvs5wkxxpa9c4ldz3khgsk5sw3cgzdzn3cm6a0xf", - "depends": ["feature", "geometry", "hdrcde", "KernSmooth", "ks", "misc3d", "ptinpoly", "rgl"] + "depends": ["KernSmooth", "feature", "geometry", "hdrcde", "ks", "misc3d", "ptinpoly", "rgl"] }, "curveDepth": { "name": "curveDepth", "version": "0.1.0.9", "sha256": "10mhy2nyll4d1q71qnlsal0raccz3awd0j0vi5w58di9wlv1c241", - "depends": ["ddalpha", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ddalpha"] }, "curvecomp": { "name": "curvecomp", @@ -51953,12 +52529,12 @@ "name": "curvir", "version": "0.1.1", "sha256": "132cqsya612k8mhrhwl0133nhj30p0fa43q819s7cq0rnwhnna64", - "depends": ["abind", "cvTools", "mgcv", "pbapply", "pso", "qgam", "quantregForest", "randomForest", "RColorBrewer"] + "depends": ["RColorBrewer", "abind", "cvTools", "mgcv", "pbapply", "pso", "qgam", "quantregForest", "randomForest"] }, "cusp": { "name": "cusp", - "version": "2.3.6", - "sha256": "0rpljddawrbq2q04fc426s57wbl3adp6mfkdv8bpjkfcyq2swbdh", + "version": "2.3.8", + "sha256": "010qb3asn3nml44xyn7ch2vm8fhjh3a28hqivvr1q7mdzqjq6v3x", "depends": [] }, "custom_gauss_quad": { @@ -51967,6 +52543,12 @@ "sha256": "1rpg3wrpvmn24a8kmm3mwyqmrcx2pxhhrf40wp31nv8jfy7cfm7c", "depends": ["Rmpfr"] }, + "customiser": { + "name": "customiser", + "version": "0.1.1", + "sha256": "0rwky3nrg6xhxb07v24d9j4359rmsn78xfxnv57kay8n5pmmh1s0", + "depends": ["fs", "knitr", "rlang", "rmarkdown", "withr"] + }, "customizedTraining": { "name": "customizedTraining", "version": "1.2", @@ -51977,7 +52559,7 @@ "name": "cusum", "version": "0.4.1", "sha256": "0vjq3slkjdgls41xm637xkrg8jhv6y75xiyfcgpwrp32ixmakpcd", - "depends": ["checkmate", "data_table", "Rcpp"] + "depends": ["Rcpp", "checkmate", "data_table"] }, "cusumcharter": { "name": "cusumcharter", @@ -51989,31 +52571,31 @@ "name": "cutoff", "version": "1.3", "sha256": "0anrvmlvcxah620il3fkq6ldp7hx4nwdnzcpmfc5mhlsry0lp178", - "depends": ["do", "ROCit", "set", "survival"] + "depends": ["ROCit", "do", "set", "survival"] }, "cutpointr": { "name": "cutpointr", "version": "1.1.2", "sha256": "1qxnh20hs3bh9v04ls7gwwl7lfc6bwl8c88dn8lkcdqyp3nyr01j", - "depends": ["dplyr", "foreach", "ggplot2", "gridExtra", "purrr", "Rcpp", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Rcpp", "dplyr", "foreach", "ggplot2", "gridExtra", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "cv": { "name": "cv", "version": "2.0.0", "sha256": "1jhvi0bf8r66q2kqjylg0fdnzxpsaxq1ivm82akhczivjn39wvv8", - "depends": ["car", "doParallel", "foreach", "glmmTMB", "gtools", "insight", "lme4", "MASS", "nlme"] + "depends": ["MASS", "car", "doParallel", "foreach", "glmmTMB", "gtools", "insight", "lme4", "nlme"] }, "cvAUC": { "name": "cvAUC", "version": "1.1.4", "sha256": "1m2y50a1yapf1c74km9a4r47ds2z2bfp4wwwkqin7swv9v1s7d28", - "depends": ["data_table", "ROCR"] + "depends": ["ROCR", "data_table"] }, "cvCovEst": { "name": "cvCovEst", "version": "1.2.2", "sha256": "148qb2995h9an2zp6rn0lvy8c6x1iiqx4cdfhzx6jdixra3593im", - "depends": ["assertthat", "coop", "dplyr", "ggplot2", "ggpubr", "Matrix", "matrixStats", "origami", "purrr", "RColorBrewer", "Rdpack", "rlang", "RMTstat", "RSpectra", "stringr", "tibble"] + "depends": ["Matrix", "RColorBrewer", "RMTstat", "RSpectra", "Rdpack", "assertthat", "coop", "dplyr", "ggplot2", "ggpubr", "matrixStats", "origami", "purrr", "rlang", "stringr", "tibble"] }, "cvGEE": { "name": "cvGEE", @@ -52021,6 +52603,12 @@ "sha256": "085qjm520l2441nakfxy851s6bfy5832b5fy54z5fp4xr1jn6snm", "depends": [] }, + "cvLM": { + "name": "cvLM", + "version": "1.0.4", + "sha256": "1mbafa75l1y757nvcqlamr98vd5qnaxakx3bsvjwrknyq29z27fs", + "depends": ["Rcpp", "RcppEigen", "RcppParallel"] + }, "cvTools": { "name": "cvTools", "version": "0.3.3", @@ -52037,12 +52625,12 @@ "name": "cvar", "version": "0.5", "sha256": "066vn8flw9j0idmpi9wzvybgihdhwg3fjslx2isbrb11ldl1lwky", - "depends": ["gbutils", "Rdpack"] + "depends": ["Rdpack", "gbutils"] }, "cvasi": { "name": "cvasi", - "version": "1.1.0", - "sha256": "17w13b1h8nri74j5s94klwmrzjcd88llz2n84v54nc6nza77yk9g", + "version": "1.1.3", + "sha256": "0915nxf2g2v2z8mdah2cshba2ji00v3m3mbj4djfnqjcvnj8p829", "depends": ["attempt", "cli", "deSolve", "dplyr", "furrr", "ggplot2", "glue", "lemna", "lifecycle", "lubridate", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "units"] }, "cvcrand": { @@ -52061,7 +52649,7 @@ "name": "cvmaPLFAM", "version": "0.1.0", "sha256": "1qmd4zbh70z1vgc6mxfr9scvqw923y9qdxjf80i826bdh7sc4wq3", - "depends": ["fda", "MASS", "mgcv", "quadprog"] + "depends": ["MASS", "fda", "mgcv", "quadprog"] }, "cvmdisc": { "name": "cvmdisc", @@ -52077,15 +52665,15 @@ }, "cvms": { "name": "cvms", - "version": "1.6.1", - "sha256": "0iwg6biy700lgn038ws0dk0qqfl7nws1nxcgkhdd4wm6ki4qb1pq", - "depends": ["checkmate", "data_table", "dplyr", "ggplot2", "groupdata2", "lifecycle", "lme4", "MuMIn", "parameters", "plyr", "pROC", "purrr", "rearrr", "recipes", "rlang", "stringr", "tibble", "tidyr"] + "version": "1.6.2", + "sha256": "08l33vianqd7kdxy5mys54cqahnp10sdzs2pmpd3iq97cs1qx4qb", + "depends": ["MuMIn", "checkmate", "data_table", "dplyr", "ggplot2", "groupdata2", "lifecycle", "lme4", "pROC", "parameters", "plyr", "purrr", "rearrr", "recipes", "rlang", "stringr", "tibble", "tidyr"] }, "cvsem": { "name": "cvsem", "version": "1.0.0", "sha256": "148v8axwxfr328l709b6q1fmqnzmiw9g7589zgwha4d6lrx4ak4i", - "depends": ["lavaan", "Rdpack"] + "depends": ["Rdpack", "lavaan"] }, "cvwrapr": { "name": "cvwrapr", @@ -52097,19 +52685,19 @@ "name": "cwbtools", "version": "0.4.2", "sha256": "1aanda6rj60rkkbkxijj4r4bx0caiyr9ifw0pg6nabv4fwfnlb4x", - "depends": ["cli", "curl", "data_table", "fs", "httr", "jsonlite", "lifecycle", "pbapply", "R6", "RcppCWB", "rstudioapi", "stringi", "xml2", "zen4R"] + "depends": ["R6", "RcppCWB", "cli", "curl", "data_table", "fs", "httr", "jsonlite", "lifecycle", "pbapply", "rstudioapi", "stringi", "xml2", "zen4R"] }, "cwot": { "name": "cwot", "version": "0.1.0", "sha256": "1qg9aizkz40sfm65b8sxcmj1232zb3ds8gds45lv0prf8alc7az3", - "depends": ["mvtnorm", "SPAtest"] + "depends": ["SPAtest", "mvtnorm"] }, "cxhull": { "name": "cxhull", "version": "0.7.4", "sha256": "0jxr1fz7cyarcq50jkkc2f3f1zwmbljpdpl56hfcilb43z2rkzkj", - "depends": ["data_table", "rgl", "Rvcg"] + "depends": ["Rvcg", "data_table", "rgl"] }, "cxr": { "name": "cxr", @@ -52133,7 +52721,7 @@ "name": "cyclestreets", "version": "1.0.1", "sha256": "0xrgwhlq670m109j27ln93zzq0wm8cfbkivd45v2rldxgvd50348", - "depends": ["checkmate", "curl", "data_table", "dplyr", "geojsonsf", "httr", "jsonlite", "magrittr", "progressr", "RcppSimdJson", "readr", "sf", "stringi", "stringr"] + "depends": ["RcppSimdJson", "checkmate", "curl", "data_table", "dplyr", "geojsonsf", "httr", "jsonlite", "magrittr", "progressr", "readr", "sf", "stringi", "stringr"] }, "cyclocomp": { "name": "cyclocomp", @@ -52157,7 +52745,7 @@ "name": "cyclotomic", "version": "1.3.0", "sha256": "1r2z21d2fylifw39ascx73k4rlfa3b1zg2pdbm2j7hg7g7rsr8w5", - "depends": ["gmp", "intmap", "maybe", "memoise", "numbers", "VeryLargeIntegers"] + "depends": ["VeryLargeIntegers", "gmp", "intmap", "maybe", "memoise", "numbers"] }, "cyjShiny": { "name": "cyjShiny", @@ -52169,7 +52757,7 @@ "name": "cylcop", "version": "0.2.0", "sha256": "1kh1h7zmk2d2p81ih1xyf3rv1g9gpjrdwyj3j812kp0krz71km4n", - "depends": ["circular", "copula", "cowplot", "data_table", "dplyr", "ggplot2", "GoFKernel", "infotheo", "MASS", "mixR", "movMF", "plotly", "purrr", "Rdpack", "rgl", "rlang", "stringr", "transport", "viridis"] + "depends": ["GoFKernel", "MASS", "Rdpack", "circular", "copula", "cowplot", "data_table", "dplyr", "ggplot2", "infotheo", "mixR", "movMF", "plotly", "purrr", "rgl", "rlang", "stringr", "transport", "viridis"] }, "cymruservices": { "name": "cymruservices", @@ -52193,19 +52781,19 @@ "name": "cytofan", "version": "0.1.0", "sha256": "0gqs98mnwiawnyfb9hs5nlin8d1fj64bszn4b40gs8ajyh36r9pp", - "depends": ["ggplot2", "RColorBrewer"] + "depends": ["RColorBrewer", "ggplot2"] }, "cytometree": { "name": "cytometree", "version": "2.0.2", "sha256": "18g7av73lmnyga1kk24bf8jy599zn9n6qhr13mxsqgi0zdinicfa", - "depends": ["cowplot", "ggplot2", "GoFKernel", "igraph", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["GoFKernel", "Rcpp", "RcppArmadillo", "cowplot", "ggplot2", "igraph", "mclust"] }, "cytominer": { "name": "cytominer", "version": "0.2.2", "sha256": "1n9yimjhdziv1vzjyni6ssi38nxcnfr5jpmzgxcn6vysffh5s9pz", - "depends": ["caret", "doParallel", "dplyr", "foreach", "futile_logger", "magrittr", "Matrix", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["Matrix", "caret", "doParallel", "dplyr", "foreach", "futile_logger", "magrittr", "purrr", "rlang", "tibble", "tidyr"] }, "czechrates": { "name": "czechrates", @@ -52215,8 +52803,8 @@ }, "czso": { "name": "czso", - "version": "0.3.12", - "sha256": "0zg1sqka0m1cc5cwdkb0b12fb27mj4skz2vbvn6xqjbww1yjxrpd", + "version": "0.4.1", + "sha256": "0hsml601swdig8ky210c8w3n2zfgn3f14ai9l43ni1iplkcpcdxi", "depends": ["cli", "curl", "dplyr", "httr", "jsonlite", "lifecycle", "magrittr", "readr", "rlang", "stringi", "tibble"] }, "d3Network": { @@ -52253,7 +52841,7 @@ "name": "d4storagehub4R", "version": "0.4-4", "sha256": "0ixv8wypcvcrn3xig8sg54mizsll4v2665l8hqd1q15d0ln2p789", - "depends": ["httr", "jsonlite", "keyring", "R6", "XML", "xml2"] + "depends": ["R6", "XML", "httr", "jsonlite", "keyring", "xml2"] }, "dBlockmodeling": { "name": "dBlockmodeling", @@ -52265,7 +52853,7 @@ "name": "dCUR", "version": "1.0.1", "sha256": "1blrxgf911b1y2pcp3hsv6cigpnclscjadlf5656kldblzj5w5m1", - "depends": ["dplyr", "ggplot2", "magrittr", "MASS", "mclust", "ppcor", "Rdpack"] + "depends": ["MASS", "Rdpack", "dplyr", "ggplot2", "magrittr", "mclust", "ppcor"] }, "dChipIO": { "name": "dChipIO", @@ -52277,13 +52865,13 @@ "name": "dCovTS", "version": "1.4", "sha256": "0rwbs1z9pf8f6hpp3df584c0k5g4frbzcwr288inh1cg51maphq4", - "depends": ["dcov", "doParallel", "foreach", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "dcov", "doParallel", "foreach"] }, "dGAselID": { "name": "dGAselID", "version": "1.2", "sha256": "0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6", - "depends": ["ALL", "Biobase", "genefilter", "MLInterfaces"] + "depends": ["ALL", "Biobase", "MLInterfaces", "genefilter"] }, "dHSIC": { "name": "dHSIC", @@ -52295,7 +52883,7 @@ "name": "dLagM", "version": "1.1.13", "sha256": "0wn09qdmnahn0imi17yq4flcnr69cms832si1z03l9xwcjkfjxfm", - "depends": ["AER", "dynlm", "formula_tools", "lmtest", "MASS", "nardl", "plyr", "roll", "sandwich", "strucchange", "wavethresh"] + "depends": ["AER", "MASS", "dynlm", "formula_tools", "lmtest", "nardl", "plyr", "roll", "sandwich", "strucchange", "wavethresh"] }, "dMod": { "name": "dMod", @@ -52349,13 +52937,13 @@ "name": "dabr", "version": "0.0.4", "sha256": "14q8frsg8qk46yldawh58cjm4v10im4ar5r5f4yfdxf6jdaadfih", - "depends": ["knitr", "magrittr", "RMariaDB", "tibble"] + "depends": ["RMariaDB", "knitr", "magrittr", "tibble"] }, "dacc": { "name": "dacc", - "version": "0.0-3", - "sha256": "1hd6n6411pb3r9s69b0b9b5a94cnbq6b098yj681bn737ldraj52", - "depends": ["Iso", "janitor", "magrittr", "MASS", "pracma"] + "version": "0.0-4", + "sha256": "09mnmlh3b0xlh3qcf7k0cfaszybj9dgpxczlllwjyymx7zmi1pmk", + "depends": ["CFtime", "Iso", "MASS", "janitor", "magrittr", "ncdf4", "pracma", "sp"] }, "dad": { "name": "dad", @@ -52379,7 +52967,7 @@ "name": "dados", "version": "0.1.0", "sha256": "1jdna8s10qz50zrsrm36y1jx489sznd86akx2lwdmriiiz3abn65", - "depends": ["AmesHousing", "babynames", "dplyr", "forcats", "fueleconomy", "gapminder", "ggplot2", "Lahman", "nasaweather", "nycflights13", "palmerpenguins", "pixarfilms", "rlang", "tibble", "tidyr", "yaml"] + "depends": ["AmesHousing", "Lahman", "babynames", "dplyr", "forcats", "fueleconomy", "gapminder", "ggplot2", "nasaweather", "nycflights13", "palmerpenguins", "pixarfilms", "rlang", "tibble", "tidyr", "yaml"] }, "dae": { "name": "dae", @@ -52397,12 +52985,12 @@ "name": "daff", "version": "1.1.1", "sha256": "0zbh3p7d2r04j9kzfk32j2zw9f745dk7yl2dx8lflrm0zidwbxc4", - "depends": ["jsonlite", "V8"] + "depends": ["V8", "jsonlite"] }, "dafishr": { "name": "dafishr", - "version": "1.0.0", - "sha256": "1n6b1r1awwxvdhn4znwp1p4jp3gvrjz017darjagx4cix0iisw1p", + "version": "1.0.1", + "sha256": "1pdw0qrsln6cf7k1r0a09j7va5nzyz7a484nz5fjccxs0lwgxhjx", "depends": ["dplyr", "fst", "ggplot2", "lubridate", "magrittr", "mixtools", "readr", "readxl", "rlang", "sf", "stringr", "tibble", "tidyr", "tidyselect", "vroom"] }, "dafs": { @@ -52421,13 +53009,13 @@ "name": "dagirlite", "version": "0.1.0", "sha256": "12j5mfxcv32qgx1yklcq8yl2kx4lkxap4biywjrj0sjx6zj60f8l", - "depends": ["knitr", "Rdpack"] + "depends": ["Rdpack", "knitr"] }, "dagitty": { "name": "dagitty", "version": "0.3-4", "sha256": "10iw5ldra7ih3jpp1iaac6cbfgpl62bq09zl30c0z03mzhj18vvr", - "depends": ["boot", "jsonlite", "MASS", "V8"] + "depends": ["MASS", "V8", "boot", "jsonlite"] }, "dagwood": { "name": "dagwood", @@ -52445,7 +53033,7 @@ "name": "dail", "version": "1.5.2", "sha256": "0a82ch0l7ci9vjrwyy38qhw8zrp9d4h2bmk963llm9aqf4j7lkhf", - "depends": ["deflateBR", "dplyr", "janitor", "lubridate", "magrittr", "RCurl", "readr", "stopwords", "stringr", "tidytext"] + "depends": ["RCurl", "deflateBR", "dplyr", "janitor", "lubridate", "magrittr", "readr", "stopwords", "stringr", "tidytext"] }, "daiquiri": { "name": "daiquiri", @@ -52457,13 +53045,13 @@ "name": "daltoolbox", "version": "1.0.767", "sha256": "02rhbcgjwlx45y0641yjlamzgl2swm60hmvwppr4nk24hb0hjczs", - "depends": ["caret", "class", "cluster", "dbscan", "dplyr", "e1071", "elmNNRcpp", "FNN", "forecast", "ggplot2", "MLmetrics", "nnet", "randomForest", "reshape", "reticulate", "tree"] + "depends": ["FNN", "MLmetrics", "caret", "class", "cluster", "dbscan", "dplyr", "e1071", "elmNNRcpp", "forecast", "ggplot2", "nnet", "randomForest", "reshape", "reticulate", "tree"] }, "daltoolboxdp": { "name": "daltoolboxdp", "version": "1.0.767", "sha256": "1l34wb2vl9wmf0vrhis29w4hz1m9jx9qdfi494rfnwals054j3ah", - "depends": ["daltoolbox", "doBy", "FSelector", "glmnet", "leaps", "smotefamily"] + "depends": ["FSelector", "daltoolbox", "doBy", "glmnet", "leaps", "smotefamily"] }, "dam": { "name": "dam", @@ -52473,9 +53061,9 @@ }, "damAOI": { "name": "damAOI", - "version": "0.0", - "sha256": "1vfc1nwzr76djmwriln9dh8hj6iq5ji9vxfnpzydl34niqckscf0", - "depends": ["dplyr", "FNN", "leaflet", "magrittr", "sf", "shiny", "shinydashboard", "smoothr", "terra", "tibble", "tidyr", "units"] + "version": "0.1", + "sha256": "14cfixlc50ml9l2b8m397b292ddq1l36bp8yqw8jw93c3d1q3zpp", + "depends": ["FNN", "dplyr", "leaflet", "magrittr", "sf", "shiny", "shinydashboard", "smoothr", "terra", "tibble", "tidyr", "units"] }, "damr": { "name": "damr", @@ -52505,7 +53093,7 @@ "name": "dann", "version": "1.0.0", "sha256": "0hmmkzv3cq0yl8kgcj08557zx086ablh6ngmyxhb1chig7kmmb4x", - "depends": ["ellipsis", "fpc", "ggplot2", "hardhat", "MASS", "purrr", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tibble"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ellipsis", "fpc", "ggplot2", "hardhat", "purrr", "rlang", "stringr", "tibble"] }, "danstat": { "name": "danstat", @@ -52513,6 +53101,12 @@ "sha256": "16b0dl41g56s6iyxndpl403wgqqj1l3g9k78y3ciq5djq3a25m97", "depends": ["httr", "jsonlite", "readr"] }, + "dapper": { + "name": "dapper", + "version": "1.0.0", + "sha256": "06s78b80215lxsi68isaha6kfrr0490s4bg0y9yf5v5ns9a6x0wv", + "depends": ["bayesplot", "checkmate", "furrr", "memoise", "posterior", "progressr"] + }, "daqapo": { "name": "daqapo", "version": "0.3.2", @@ -52529,13 +53123,13 @@ "name": "dartR", "version": "2.9.7", "sha256": "1wwm2gq743l90jsa1hsgxknqxqp0ga8vf3xv652m3ifpyrkp93vx", - "depends": ["adegenet", "ape", "crayon", "dartR_data", "data_table", "dplyr", "fields", "foreach", "ggplot2", "gridExtra", "MASS", "patchwork", "plyr", "PopGenReport", "raster", "reshape2", "shiny", "SNPRelate", "sp", "StAMPP", "stringr", "tidyr", "vegan"] + "depends": ["MASS", "PopGenReport", "SNPRelate", "StAMPP", "adegenet", "ape", "crayon", "dartR_data", "data_table", "dplyr", "fields", "foreach", "ggplot2", "gridExtra", "patchwork", "plyr", "raster", "reshape2", "shiny", "sp", "stringr", "tidyr", "vegan"] }, "dartR_base": { "name": "dartR.base", "version": "0.65", "sha256": "1887ksyszlp65i4z6zhh6j1pihfkkimiwrv6bqav5z7gmw2i0pi7", - "depends": ["adegenet", "ape", "crayon", "dartR_data", "data_table", "dplyr", "foreach", "ggplot2", "gridExtra", "MASS", "patchwork", "plyr", "reshape2", "SNPRelate", "StAMPP", "stringr", "tidyr"] + "depends": ["MASS", "SNPRelate", "StAMPP", "adegenet", "ape", "crayon", "dartR_data", "data_table", "dplyr", "foreach", "ggplot2", "gridExtra", "patchwork", "plyr", "reshape2", "stringr", "tidyr"] }, "dartR_captive": { "name": "dartR.captive", @@ -52551,21 +53145,27 @@ }, "dartR_popgen": { "name": "dartR.popgen", - "version": "0.32", - "sha256": "1sr9dd6nyspcv0lvj42qa1wpnichjxq1nqp6rl0i6f6jz00fm5mv", - "depends": ["adegenet", "crayon", "dartR_base", "dartR_data", "data_table", "dplyr", "ggplot2", "MASS", "patchwork", "stringr"] + "version": "1.0.0", + "sha256": "0wi2pkd3c2f05m0g3mhr3j6nq0wgn656c6z8h4vlphfinnz0knja", + "depends": ["MASS", "adegenet", "crayon", "dartR_base", "dartR_data", "data_table", "dplyr", "furrr", "future", "ggdendro", "ggplot2", "patchwork", "stringr"] + }, + "dartR_sexlinked": { + "name": "dartR.sexlinked", + "version": "1.0.5", + "sha256": "07x9zly2vwzd9riw0hfwl8nqq4chs9rgwjj7b39whz25an6aqvvw", + "depends": ["adegenet", "dartR_base", "dartR_data", "doParallel", "foreach", "ggplot2", "patchwork"] }, "dartR_sim": { "name": "dartR.sim", "version": "0.70", "sha256": "02l18hvdd1hr9l15frvaw7nikjmr7iyq3wvg5xz8drma4v9r9lwb", - "depends": ["adegenet", "dartR_base", "dartR_data", "data_table", "fields", "ggplot2", "hierfstat", "Rcpp", "reshape2", "shiny", "shinyBS", "shinyjs", "shinythemes", "shinyWidgets", "stringi", "stringr"] + "depends": ["Rcpp", "adegenet", "dartR_base", "dartR_data", "data_table", "fields", "ggplot2", "hierfstat", "reshape2", "shiny", "shinyBS", "shinyWidgets", "shinyjs", "shinythemes", "stringi", "stringr"] }, "dartR_spatial": { "name": "dartR.spatial", "version": "0.78", "sha256": "1fjajinsc2ikvhz4igjyldvfd5skdqhnay5209dzx4xjpnkik5vv", - "depends": ["adegenet", "crayon", "dartR_base", "dartR_data", "data_table", "ggplot2", "MASS", "raster", "sp", "StAMPP", "tidyr", "vegan"] + "depends": ["MASS", "StAMPP", "adegenet", "crayon", "dartR_base", "dartR_data", "data_table", "ggplot2", "raster", "sp", "tidyr", "vegan"] }, "dartRverse": { "name": "dartRverse", @@ -52583,7 +53183,7 @@ "name": "dat", "version": "0.5.0", "sha256": "1d3q4bang6pm06rfzh6h947xy3wwqn3l6ri0h4hzklg5pzwpsajd", - "depends": ["aoos", "data_table", "Formula", "magrittr", "progress"] + "depends": ["Formula", "aoos", "data_table", "magrittr", "progress"] }, "data_table": { "name": "data.table", @@ -52601,7 +53201,7 @@ "name": "data.validator", "version": "0.2.1", "sha256": "118crpyyp2szj0l3rsqmzi1cpcv45lwlvczp25f28z1lgcx6mgcx", - "depends": ["assertr", "dplyr", "htmltools", "htmlwidgets", "knitr", "purrr", "R6", "rlang", "rmarkdown", "shiny_semantic", "tibble", "tidyr"] + "depends": ["R6", "assertr", "dplyr", "htmltools", "htmlwidgets", "knitr", "purrr", "rlang", "rmarkdown", "shiny_semantic", "tibble", "tidyr"] }, "data360r": { "name": "data360r", @@ -52637,7 +53237,7 @@ "name": "dataPreparation", "version": "1.1.1", "sha256": "0ck3g9hymj6i1a9nr58srm8jxbaghh5w5jg9cqbx5zp18fc0w81v", - "depends": ["data_table", "lubridate", "Matrix", "progress", "stringr"] + "depends": ["Matrix", "data_table", "lubridate", "progress", "stringr"] }, "dataReporter": { "name": "dataReporter", @@ -52647,8 +53247,8 @@ }, "dataRetrieval": { "name": "dataRetrieval", - "version": "2.7.15", - "sha256": "0h5k68541nqg03hmfzfg4bqwjggl95yk9s2hlmfjxx3gxg4g5719", + "version": "2.7.16", + "sha256": "11hwk81vyzn6jx0z3flhh7gfwmfr1irysxghsbb2sgdqdffs6vh1", "depends": ["curl", "httr", "jsonlite", "lubridate", "readr", "xml2"] }, "dataSDA": { @@ -52659,9 +53259,9 @@ }, "databraryr": { "name": "databraryr", - "version": "0.6.4", - "sha256": "0ycpkdz3ln9a1yvcl142agk7cfzz0qh8yzx6y7ihy7zkl646m99m", - "depends": ["assertthat", "dplyr", "getPass", "httr", "httr2", "jsonlite", "keyring", "lifecycle", "magick", "magrittr", "plyr", "purrr", "rvest", "stringr", "tibble", "xfun"] + "version": "0.6.6", + "sha256": "0mws4jw81l91cml8fh4n244nzjrfznsg05vsqfbyc75ciqlmw8hk", + "depends": ["assertthat", "dplyr", "getPass", "httr2", "keyring", "lifecycle", "magick", "magrittr", "options", "purrr", "stringr", "tibble", "xfun"] }, "dataclass": { "name": "dataclass", @@ -52673,7 +53273,7 @@ "name": "datacleanr", "version": "1.0.3", "sha256": "0mrfqm3lgb6sl2j35sfd00gb5121j9wmlff8k0vczr3sgmqz4dg8", - "depends": ["bslib", "clipr", "dplyr", "DT", "formatR", "fs", "glue", "htmltools", "htmlwidgets", "lubridate", "magrittr", "plotly", "purrr", "RColorBrewer", "rlang", "rstudioapi", "shiny", "shinyFiles", "shinyWidgets", "summarytools"] + "depends": ["DT", "RColorBrewer", "bslib", "clipr", "dplyr", "formatR", "fs", "glue", "htmltools", "htmlwidgets", "lubridate", "magrittr", "plotly", "purrr", "rlang", "rstudioapi", "shiny", "shinyFiles", "shinyWidgets", "summarytools"] }, "datacutr": { "name": "datacutr", @@ -52709,19 +53309,19 @@ "name": "datafsm", "version": "0.2.4", "sha256": "0klhkbwpaqxk2mnxha8b03mpgfxk107ff9d2nx6cky59il3c1825", - "depends": ["caret", "GA", "Rcpp"] + "depends": ["GA", "Rcpp", "caret"] }, "datagovsgR": { "name": "datagovsgR", - "version": "1.0.0", - "sha256": "1vi3pql1k563ggvqr0d673z2aspvqi1w384lslinnsq85cwcfcly", + "version": "1.0.1", + "sha256": "1z3zrvz9dc9a06kp8agrgvx1l6g5hq2cmmn6xpabp68pkw4jdpc6", "depends": ["data_table", "dplyr", "httr", "purrr", "stringr"] }, "datamods": { "name": "datamods", "version": "1.5.1", "sha256": "0bxfa001j9vib0sj9d32qyzrqjvdzm5zxcpg1mm3jw31546jl46p", - "depends": ["classInt", "data_table", "htmltools", "phosphoricons", "reactable", "readxl", "rio", "rlang", "shiny", "shinybusy", "shinyWidgets", "tibble", "toastui", "writexl"] + "depends": ["classInt", "data_table", "htmltools", "phosphoricons", "reactable", "readxl", "rio", "rlang", "shiny", "shinyWidgets", "shinybusy", "tibble", "toastui", "writexl"] }, "datana": { "name": "datana", @@ -52731,9 +53331,9 @@ }, "datanugget": { "name": "datanugget", - "version": "1.2.4", - "sha256": "0r75vc6fzafv2kwq228w9iw0ryhwmly839dhcgf8bqgxyzd9gs16", - "depends": ["doSNOW", "foreach", "Rfast"] + "version": "1.3.0", + "sha256": "0l39yxvbxnzmxq1zjrm30a34ipwhjh5vnn7bqmsivbjci4z7mbyi", + "depends": ["Rfast", "doSNOW", "foreach"] }, "dataonderivatives": { "name": "dataonderivatives", @@ -52745,13 +53345,13 @@ "name": "dataone", "version": "2.2.2", "sha256": "0509dmvf3kgk15cjbz3m9fzanbdpa5r0rz921m776a4bsjsilv4i", - "depends": ["base64enc", "datapack", "httr", "jsonlite", "parsedate", "plyr", "stringi", "stringr", "uuid", "XML"] + "depends": ["XML", "base64enc", "datapack", "httr", "jsonlite", "parsedate", "plyr", "stringi", "stringr", "uuid"] }, "datapack": { "name": "datapack", "version": "1.4.1", "sha256": "14vlcgk5sckzkc15cjvrbs113y65rqlwm1az7nsvnsqfx4x76jb1", - "depends": ["digest", "fs", "redland", "uuid", "XML", "zip"] + "depends": ["XML", "digest", "fs", "redland", "uuid", "zip"] }, "datapasta": { "name": "datapasta", @@ -52769,7 +53369,7 @@ "name": "dataquieR", "version": "2.1.0", "sha256": "1y8s6igz7ckvqamz26lrks62fnh51w1gz18gv7saxkmiwcacfjh4", - "depends": ["dplyr", "emmeans", "ggplot2", "lifecycle", "lme4", "lubridate", "MASS", "MultinomialCI", "parallelMap", "patchwork", "qmrparser", "R_devices", "readr", "rio", "rlang", "robustbase", "scales", "units", "withr"] + "depends": ["MASS", "MultinomialCI", "R_devices", "dplyr", "emmeans", "ggplot2", "lifecycle", "lme4", "lubridate", "parallelMap", "patchwork", "qmrparser", "readr", "rio", "rlang", "robustbase", "scales", "units", "withr"] }, "datardis": { "name": "datardis", @@ -52835,13 +53435,13 @@ "name": "dataspice", "version": "1.1.0", "sha256": "1pnmb7kdx9wdvi2873rw1a7hc7spsvx4lfvfhfcqwgll46j0f1wm", - "depends": ["dplyr", "EML", "fs", "ggplot2", "jsonlite", "magrittr", "purrr", "readr", "rhandsontable", "shiny", "stringr", "tibble", "tidyr", "whisker"] + "depends": ["EML", "dplyr", "fs", "ggplot2", "jsonlite", "magrittr", "purrr", "readr", "rhandsontable", "shiny", "stringr", "tibble", "tidyr", "whisker"] }, "datastepr": { "name": "datastepr", "version": "0.0.2", "sha256": "039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2", - "depends": ["dplyr", "lazyeval", "magrittr", "R6", "tibble"] + "depends": ["R6", "dplyr", "lazyeval", "magrittr", "tibble"] }, "dataverifyr": { "name": "dataverifyr", @@ -52857,15 +53457,15 @@ }, "datawizard": { "name": "datawizard", - "version": "0.11.0", - "sha256": "0cghk6flxxsz079sw8l4aw1h4girg7mwl61237a7ymmhvny70d4k", + "version": "0.12.2", + "sha256": "10g05f6jm7q59ihsb8wpg5fyy2an56gv33l7jiimjc818hh6bqzy", "depends": ["insight"] }, "datazoom_amazonia": { "name": "datazoom.amazonia", "version": "1.1.0", "sha256": "1c2l42rwj67lr2910i1wdb04sqqwkdv5ycav6bz3snw349j8mycm", - "depends": ["data_table", "dplyr", "Hmisc", "janitor", "magrittr", "purrr", "Rcpp", "readr", "readxl", "sf", "sidrar", "stringi", "stringr", "tibble", "tidyr", "XML"] + "depends": ["Hmisc", "Rcpp", "XML", "data_table", "dplyr", "janitor", "magrittr", "purrr", "readr", "readxl", "sf", "sidrar", "stringi", "stringr", "tibble", "tidyr"] }, "date": { "name": "date", @@ -52883,13 +53483,13 @@ "name": "datefixR", "version": "1.6.1", "sha256": "1xmrx8djxc05r9yvgfgkvmp19m2pj6n2g1r4siikwkzlssh2x8fz", - "depends": ["lifecycle", "Rcpp", "rlang", "stringr"] + "depends": ["Rcpp", "lifecycle", "rlang", "stringr"] }, "datelife": { "name": "datelife", "version": "0.6.8", "sha256": "154nmpvslnizd03jaxbhkc7vjzjx7j18zlwmrpx2qidqk424k1i9", - "depends": ["abind", "ape", "BiocManager", "bold", "cluster", "compare", "curl", "data_table", "geiger", "httr", "ips", "knitcitations", "paleotree", "phangorn", "phylobase", "phylocomr", "phytools", "plyr", "rotl", "stringr", "taxize", "treebase"] + "depends": ["BiocManager", "abind", "ape", "bold", "cluster", "compare", "curl", "data_table", "geiger", "httr", "ips", "knitcitations", "paleotree", "phangorn", "phylobase", "phylocomr", "phytools", "plyr", "rotl", "stringr", "taxize", "treebase"] }, "daterangepicker": { "name": "daterangepicker", @@ -52925,7 +53525,7 @@ "name": "dateutils", "version": "0.1.5", "sha256": "03xch5wcvv15fy9x70smrki6374lddhf0sfp0inymdsq4g8wp4bc", - "depends": ["data_table", "Rcpp", "RcppArmadillo", "seasonal"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "seasonal"] }, "datoramar": { "name": "datoramar", @@ -52937,7 +53537,7 @@ "name": "datos", "version": "0.5.1", "sha256": "0358fshhxyws5i1bblhnhf7k42mrjn76ppy2qrvhj27kkc6i5npn", - "depends": ["babynames", "dplyr", "forcats", "fueleconomy", "gapminder", "ggplot2", "Lahman", "modeldata", "nasaweather", "nycflights13", "palmerpenguins", "rlang", "tibble", "tidyr", "yaml"] + "depends": ["Lahman", "babynames", "dplyr", "forcats", "fueleconomy", "gapminder", "ggplot2", "modeldata", "nasaweather", "nycflights13", "palmerpenguins", "rlang", "tibble", "tidyr", "yaml"] }, "datplot": { "name": "datplot", @@ -52955,12 +53555,12 @@ "name": "datrProfile", "version": "0.1.0", "sha256": "1bhyk3xjgwf92i765z3bkdnzkxg8fshriz9r6m371q1c75xysfil", - "depends": ["dplyr", "odbc", "RSQLite"] + "depends": ["RSQLite", "dplyr", "odbc"] }, "dauphin": { "name": "dauphin", - "version": "0.3.1", - "sha256": "0p84hnvipi5pvyzwrgl7a1xv7lmq2vm96l6dfbpd2r9vb4mhbrn7", + "version": "0.3.2", + "sha256": "1cl0jipwnarkx26bhv9s1bk9q9y6ni2568xqy2w7x5nh5v38rvfx", "depends": [] }, "dawai": { @@ -52997,7 +53597,7 @@ "name": "dbWebForms", "version": "0.1.0", "sha256": "0diz5mh4fhwrwqa7jr70vzj2jks7h2n91v2hr1mvvlbc7rzd9yki", - "depends": ["data_table", "DBI", "html5", "stringi"] + "depends": ["DBI", "data_table", "html5", "stringi"] }, "dbacf": { "name": "dbacf", @@ -53015,7 +53615,7 @@ "name": "dbcsp", "version": "0.0.2.1", "sha256": "0faq63aqj4ddlfc5dpi8g3ngqidca6czicgvkzdyg4bj87s0kism", - "depends": ["caret", "geigen", "ggplot2", "MASS", "Matrix", "parallelDist", "plyr", "TSdist", "zoo"] + "depends": ["MASS", "Matrix", "TSdist", "caret", "geigen", "ggplot2", "parallelDist", "plyr", "zoo"] }, "dbd": { "name": "dbd", @@ -53027,7 +53627,7 @@ "name": "dbflobr", "version": "0.2.2", "sha256": "04gh0xfdp077f3ppf8i101q17n2r711y47qnxb9nq5ksnf37s5jp", - "depends": ["blob", "chk", "clisymbols", "crayon", "DBI", "flobr", "glue", "rlang", "RSQLite"] + "depends": ["DBI", "RSQLite", "blob", "chk", "clisymbols", "crayon", "flobr", "glue", "rlang"] }, "dbglm": { "name": "dbglm", @@ -53039,7 +53639,7 @@ "name": "dbhydroR", "version": "0.2-8", "sha256": "1gd3n6i47qbxp6d3y5sjvgmxc5p3afy2lhkg9020ws1xm0bk9q7d", - "depends": ["httr", "reshape2", "XML"] + "depends": ["XML", "httr", "reshape2"] }, "dblcens": { "name": "dblcens", @@ -53051,19 +53651,19 @@ "name": "dblr", "version": "0.1.0", "sha256": "0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw", - "depends": ["CatEncoders", "data_table", "Metrics", "xgboost"] + "depends": ["CatEncoders", "Metrics", "data_table", "xgboost"] }, "dbmss": { "name": "dbmss", "version": "2.9-0", "sha256": "16bmaq8wd7v6vqnycr670sajcyaplkw1g5w5m2ri7ch16ccpqk6j", - "depends": ["cubature", "ggplot2", "Rcpp", "RcppParallel", "reshape2", "rlang", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_utils", "tibble"] + "depends": ["Rcpp", "RcppParallel", "cubature", "ggplot2", "reshape2", "rlang", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_utils", "tibble"] }, "dbnR": { "name": "dbnR", - "version": "0.7.8", - "sha256": "10lw8ax33l0q52pm07fi66fhm06n3yg48plgvz5cg14l98v7g7s5", - "depends": ["bnlearn", "data_table", "magrittr", "MASS", "R6", "Rcpp"] + "version": "0.7.9", + "sha256": "14jdmld8d1laj7xcad5694inxb8qglhnzghab64h3n0r2x35z6lw", + "depends": ["MASS", "R6", "Rcpp", "bnlearn", "data_table", "magrittr"] }, "dbnlearn": { "name": "dbnlearn", @@ -53075,7 +53675,7 @@ "name": "dbparser", "version": "2.0.3", "sha256": "1v0yp81bgq9ihgjrx336zyscrhk84sc8rpmbj35sphyc0c0isncs", - "depends": ["dplyr", "progress", "purrr", "tibble", "XML"] + "depends": ["XML", "dplyr", "progress", "purrr", "tibble"] }, "dbplot": { "name": "dbplot", @@ -53087,13 +53687,13 @@ "name": "dbplyr", "version": "2.5.0", "sha256": "1zxw4ignzm2fzixsf6n80f44b9q7434vamy2xj4v31wlx3dmnixv", - "depends": ["blob", "cli", "DBI", "dplyr", "glue", "lifecycle", "magrittr", "pillar", "purrr", "R6", "rlang", "tibble", "tidyr", "tidyselect", "vctrs", "withr"] + "depends": ["DBI", "R6", "blob", "cli", "dplyr", "glue", "lifecycle", "magrittr", "pillar", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "vctrs", "withr"] }, "dbscan": { "name": "dbscan", - "version": "1.1-12", - "sha256": "1snfcf5jy3chh5nmvn7ashhlyv35nkajlfrlk9kzpy4jnfyv3y2n", - "depends": ["Rcpp"] + "version": "1.2-0", + "sha256": "0rv2h5i539ivkgwblfapjpfl09hgxvidkk6x1wmgc6hp30nbl2bj", + "depends": ["Rcpp", "generics"] }, "dbstats": { "name": "dbstats", @@ -53111,19 +53711,19 @@ "name": "dc3net", "version": "1.2.0", "sha256": "19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr", - "depends": ["c3net", "igraph", "RedeR"] + "depends": ["RedeR", "c3net", "igraph"] }, "dcTensor": { "name": "dcTensor", "version": "1.3.0", "sha256": "1z62kz9558fj5nwp2nq6vh7ikbxbg8nm0w08y5p5dc0nzhcd4kxn", - "depends": ["fields", "MASS", "nnTensor", "rTensor"] + "depends": ["MASS", "fields", "nnTensor", "rTensor"] }, "dccmidas": { "name": "dccmidas", "version": "0.1.2", "sha256": "0ws853yb669hki7wrfwnj7bd75xvcb63njn1iza8q58sa6bmg6vc", - "depends": ["maxLik", "Rcpp", "RcppArmadillo", "Rdpack", "roll", "rugarch", "rumidas", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "maxLik", "roll", "rugarch", "rumidas", "xts", "zoo"] }, "dccpp": { "name": "dccpp", @@ -53141,7 +53741,7 @@ "name": "dclone", "version": "2.3-2", "sha256": "1x0fx24fxb7zp9g9lrdb1hbljgmi9szrsh751jidm52fin863qz0", - "depends": ["coda", "Matrix", "R2OpenBUGS", "rjags", "rstan"] + "depends": ["Matrix", "R2OpenBUGS", "coda", "rjags", "rstan"] }, "dclust": { "name": "dclust", @@ -53153,7 +53753,7 @@ "name": "dcm2", "version": "1.0.2", "sha256": "1dxymql66sy0nfxqfh106cvz5r93ajpjr1w8amn03w0ciz4v5nqs", - "depends": ["dplyr", "glue", "magrittr", "modelr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "glue", "magrittr", "modelr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "dcmle": { "name": "dcmle", @@ -53171,13 +53771,13 @@ "name": "dcorVS", "version": "1.0", "sha256": "1gawk22mv5ppbiqqm4k2pjjknsp7zxnnr0lk24l6phrvnszfaxlw", - "depends": ["dcov", "Rfast"] + "depends": ["Rfast", "dcov"] }, "dcortools": { "name": "dcortools", "version": "0.1.6", "sha256": "1qcblwcv2rwrl502hiv0l0r137sa4k0kx892k2w1chm40y5vri3b", - "depends": ["ggplot2", "Hmisc", "pheatmap", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "Rfast"] + "depends": ["Hmisc", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "Rfast", "ggplot2", "pheatmap"] }, "dcov": { "name": "dcov", @@ -53193,15 +53793,15 @@ }, "dcurves": { "name": "dcurves", - "version": "0.4.0", - "sha256": "1hlpii7ba19g4gg3cj071hy3mhp80rya079118xmrcxzhn68102c", + "version": "0.5.0", + "sha256": "01w20d7j9f667spmg28pp6mj5f4sxdx9z6waz2yaijgyif14drak", "depends": ["broom", "dplyr", "ggplot2", "glue", "purrr", "rlang", "scales", "survival", "tibble"] }, "ddalpha": { "name": "ddalpha", "version": "1.3.15", "sha256": "1vgyg1c2ir93nsbh4xlm774b6rhx14pyr069dpcl9vwcx2j989qc", - "depends": ["BH", "class", "geometry", "MASS", "Rcpp", "robustbase", "sfsmisc"] + "depends": ["BH", "MASS", "Rcpp", "class", "geometry", "robustbase", "sfsmisc"] }, "ddc": { "name": "ddc", @@ -53219,7 +53819,7 @@ "name": "ddecompose", "version": "1.0.0", "sha256": "1n0s2q6qb09jnhxismaabn00pzjjjy0dwdhz8hyacmby468y266z", - "depends": ["fastglm", "Formula", "ggplot2", "Hmisc", "pbapply", "ranger", "rifreg", "sandwich"] + "depends": ["Formula", "Hmisc", "fastglm", "ggplot2", "pbapply", "ranger", "rifreg", "sandwich"] }, "ddi": { "name": "ddi", @@ -53235,9 +53835,9 @@ }, "ddml": { "name": "ddml", - "version": "0.2.1", - "sha256": "17v3yhgs440flyqvfhjapc03xvwnvg7c0kr8cphvnhx6nmwjsq53", - "depends": ["AER", "glmnet", "MASS", "Matrix", "nnls", "quadprog", "ranger", "xgboost"] + "version": "0.2.2", + "sha256": "0362sr8ivx3jcf0l28a6d1kb0zrcb0jqm2dcy9s9qq5d843r79xz", + "depends": ["AER", "MASS", "Matrix", "glmnet", "nnls", "quadprog", "ranger", "xgboost"] }, "ddp": { "name": "ddp", @@ -53249,13 +53849,13 @@ "name": "ddpca", "version": "1.1", "sha256": "1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1", - "depends": ["MASS", "Matrix", "quantreg", "RSpectra"] + "depends": ["MASS", "Matrix", "RSpectra", "quantreg"] }, "ddpcr": { "name": "ddpcr", "version": "1.15.2", "sha256": "1as25yc23n6jj87nccp7g2jrpvz6yxa7f6ba65g6ynvkzk57531b", - "depends": ["dplyr", "DT", "ggplot2", "lazyeval", "magrittr", "mixtools", "plyr", "readr", "shiny", "shinydisconnect", "shinyjs", "tibble"] + "depends": ["DT", "dplyr", "ggplot2", "lazyeval", "magrittr", "mixtools", "plyr", "readr", "shiny", "shinydisconnect", "shinyjs", "tibble"] }, "ddplot": { "name": "ddplot", @@ -53267,7 +53867,7 @@ "name": "ddsPLS", "version": "1.2.1", "sha256": "0l5dcpqs57bp6b6b718annnhilkv6n4imynylg0wimik27ipmfwl", - "depends": ["doParallel", "foreach", "RColorBrewer", "Rcpp", "RcppEigen", "shiny"] + "depends": ["RColorBrewer", "Rcpp", "RcppEigen", "doParallel", "foreach", "shiny"] }, "ddst": { "name": "ddst", @@ -53279,13 +53879,13 @@ "name": "ddtlcm", "version": "0.2.1", "sha256": "1xjpw5qx2wjq8y4ayg1d3scclsrn2bkmjk9gkff57gq2n0qlwnh0", - "depends": ["ape", "BayesLogit", "data_table", "extraDistr", "ggplot2", "ggpubr", "ggtext", "ggtree", "label_switching", "Matrix", "matrixStats", "phylobase", "poLCA", "R_utils", "Rdpack", "testthat", "truncnorm"] + "depends": ["BayesLogit", "Matrix", "R_utils", "Rdpack", "ape", "data_table", "extraDistr", "ggplot2", "ggpubr", "ggtext", "ggtree", "label_switching", "matrixStats", "phylobase", "poLCA", "testthat", "truncnorm"] }, "deBInfer": { "name": "deBInfer", "version": "0.4.4", "sha256": "1l4wim82n5q51c1f7193d3i22qrn9kfcsddyrn8izhlwsjb9q3kp", - "depends": ["coda", "deSolve", "MASS", "mvtnorm", "PBSddesolve", "plyr", "RColorBrewer", "truncdist"] + "depends": ["MASS", "PBSddesolve", "RColorBrewer", "coda", "deSolve", "mvtnorm", "plyr", "truncdist"] }, "deBif": { "name": "deBif", @@ -53297,7 +53897,7 @@ "name": "deFit", "version": "0.2.1", "sha256": "0z4lc9s3wb7gab7cg1xr9gkggd2dxy8qbqqvbz1yxvnm86n2ai79", - "depends": ["deSolve", "ggplot2", "R6"] + "depends": ["R6", "deSolve", "ggplot2"] }, "deSolve": { "name": "deSolve", @@ -53309,7 +53909,7 @@ "name": "deTS", "version": "1.0", "sha256": "08yq7vfcd8fv8qw2w0f1rnj3rzys9kslmkqspmiz6prmzqvj1zf1", - "depends": ["pheatmap", "RColorBrewer"] + "depends": ["RColorBrewer", "pheatmap"] }, "deaR": { "name": "deaR", @@ -53405,13 +54005,13 @@ "name": "decompDL", "version": "0.1.0", "sha256": "11xbxv2j8m1w4lz933jvwy20wsazqiffnn0awgv7fz6q3ma5cqkh", - "depends": ["BiocGenerics", "keras", "magrittr", "reticulate", "Rlibeemd", "tensorflow", "TSdeeplearning", "tsutils", "VMDecomp"] + "depends": ["BiocGenerics", "Rlibeemd", "TSdeeplearning", "VMDecomp", "keras", "magrittr", "reticulate", "tensorflow", "tsutils"] }, "decomposedPSF": { "name": "decomposedPSF", "version": "0.2", "sha256": "12sb4zzvc29hvhlay97g84pn4saqyp16wckjrdgg4qqpc0rzrfz5", - "depends": ["forecast", "PSF", "Rlibeemd", "tseries"] + "depends": ["PSF", "Rlibeemd", "forecast", "tseries"] }, "decompr": { "name": "decompr", @@ -53419,12 +54019,6 @@ "sha256": "0bsin2hlb8sacmkzsv4b2fqdh5b55b67lkm41icacqnvxrisnxqp", "depends": ["matrixStats"] }, - "decon": { - "name": "decon", - "version": "1.3-4", - "sha256": "036cv56wf42q2p3d5h15hbrp5rc29xxy20qwv4k1qzhkq6hmw0qs", - "depends": [] - }, "deconvolveR": { "name": "deconvolveR", "version": "1.2-1", @@ -53443,6 +54037,12 @@ "sha256": "1y47ggfsfrbsm8z78j5ibxbm4lhp90h3qwhyh4qw5dhsd6jspsbd", "depends": ["purrr"] }, + "decp": { + "name": "decp", + "version": "0.1.0", + "sha256": "1ydp2czgbfarhn6d6g34q7dvfkj3b97ql6jn5cp7gnxycj53c0k6", + "depends": ["geigen", "ggplot2", "magrittr", "matrixcalc", "purrr", "rlang"] + }, "deducorrect": { "name": "deducorrect", "version": "1.3.7", @@ -53477,7 +54077,7 @@ "name": "deepMOU", "version": "0.1.1", "sha256": "1r05wg01nighmhs2r8z91w091fz2r1ryb1j0mi96knqqdjgcbh4i", - "depends": ["dplyr", "entropy", "extraDistr", "ggplot2", "MASS", "Rfast", "skmeans"] + "depends": ["MASS", "Rfast", "dplyr", "entropy", "extraDistr", "ggplot2", "skmeans"] }, "deepNN": { "name": "deepNN", @@ -53513,7 +54113,7 @@ "name": "deepgp", "version": "1.1.2", "sha256": "0anrc209bvi061y0f7ms5hyb2k6rgfp627w0800aw8gxhl4mli4b", - "depends": ["doParallel", "FNN", "foreach", "GpGp", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["FNN", "GpGp", "Matrix", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "mvtnorm"] }, "deeplr": { "name": "deeplr", @@ -53537,7 +54137,7 @@ "name": "deepregression", "version": "1.0.0", "sha256": "15d33dsdhmw7n172rlsg70921d3z3bkn088qj565iclzmxknyfzj", - "depends": ["dplyr", "keras", "magrittr", "Matrix", "mgcv", "R6", "reticulate", "tensorflow", "tfprobability", "tfruns"] + "depends": ["Matrix", "R6", "dplyr", "keras", "magrittr", "mgcv", "reticulate", "tensorflow", "tfprobability", "tfruns"] }, "deeptime": { "name": "deeptime", @@ -53549,7 +54149,7 @@ "name": "deeptrafo", "version": "0.1-1", "sha256": "16lxxd75j9bwapfx716b9fmqfz6ms4x5g98wc1yykiahjpbj8156", - "depends": ["deepregression", "Formula", "keras", "mlt", "purrr", "R6", "reticulate", "survival", "tensorflow", "tfprobability", "variables"] + "depends": ["Formula", "R6", "deepregression", "keras", "mlt", "purrr", "reticulate", "survival", "tensorflow", "tfprobability", "variables"] }, "default": { "name": "default", @@ -53585,7 +54185,7 @@ "name": "deforestable", "version": "3.1.1", "sha256": "0p8psbsjxmc456flypdw2kh8kjsy2hw13nfcdilg527iy1dpif6i", - "depends": ["jpeg", "plyr", "Rcpp", "RcppArmadillo", "StableEstim", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "StableEstim", "jpeg", "plyr", "terra"] }, "deform": { "name": "deform", @@ -53597,7 +54197,7 @@ "name": "deformula", "version": "0.1.2", "sha256": "18jrznpw2vqb658wv88yq4x7z44ilkjg0xb5v2lww87wxbv4m0gj", - "depends": ["cpp11", "Rcpp"] + "depends": ["Rcpp", "cpp11"] }, "degday": { "name": "degday", @@ -53619,15 +54219,15 @@ }, "dejaVu": { "name": "dejaVu", - "version": "0.3.0", - "sha256": "0l30m707zrp05d7hywlx443n02mflxqsampmcblj3fvcbyywc1fd", + "version": "0.3.1", + "sha256": "102jg8bfhxbynk6v8ly73pkkhbqvgx4x1gmr7kxkdc648zspg48d", "depends": ["MASS"] }, "delayed": { "name": "delayed", "version": "0.5.0", "sha256": "17v9gis82yn0fvp4apv906sz8j77cr5rlj4xxxa3vkfvh196a40l", - "depends": ["BBmisc", "data_table", "future", "igraph", "progress", "R_oo", "R_utils", "R6", "rlang", "rstackdeque", "uuid", "visNetwork"] + "depends": ["BBmisc", "R6", "R_oo", "R_utils", "data_table", "future", "igraph", "progress", "rlang", "rstackdeque", "uuid", "visNetwork"] }, "deldir": { "name": "deldir", @@ -53657,19 +54257,19 @@ "name": "demic", "version": "2.0.0", "sha256": "1vxh8rlmq3jnrv0gzaywilqhn60vq8b56skbqgzghzk5qg95gi0k", - "depends": ["lme4", "Matrix", "reshape2"] + "depends": ["Matrix", "lme4", "reshape2"] }, "deming": { "name": "deming", - "version": "1.4", - "sha256": "1yx3qrbik6jpqgsi0gqgc7y2cra13qlisg2gq8rvnv57nvcvb421", + "version": "1.4-1", + "sha256": "1jipary7wqb9gmj4mfrz4ym5ir44q2rhknxx6ah1f5lpkcsjm6c6", "depends": ["boot"] }, "demoGraphic": { "name": "demoGraphic", "version": "0.1.0", "sha256": "0b2fqa0z875wwd7qdqh2qfvkzh2cpbmck4smf9c0p31wv5yin0sq", - "depends": ["magrittr", "MASS", "officer"] + "depends": ["MASS", "magrittr", "officer"] }, "demoKde": { "name": "demoKde", @@ -53687,7 +54287,7 @@ "name": "demodelr", "version": "1.0.1", "sha256": "1jldvlw8xl5hbyw4m443r41nw9ck7dmkd4rmag4wqw4scra7qj46", - "depends": ["dplyr", "formula_tools", "GGally", "ggplot2", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["GGally", "dplyr", "formula_tools", "ggplot2", "purrr", "rlang", "tibble", "tidyr"] }, "demogR": { "name": "demogR", @@ -53699,13 +54299,13 @@ "name": "demography", "version": "2.0", "sha256": "0smkfivhhpa5cz5kh33dh3vl4zb102mjazxsxd382z7cwfqldffd", - "depends": ["cobs", "forecast", "ftsa", "HMDHFDplus", "mgcv", "rainbow", "strucchange"] + "depends": ["HMDHFDplus", "cobs", "forecast", "ftsa", "mgcv", "rainbow", "strucchange"] }, "demu": { "name": "demu", "version": "0.3.0", "sha256": "1mp5iz8mg0d6cyqi3f6fdhk6x5xxvng5bi13b7jnlp60wpjrq0il", - "depends": ["ClusterR", "fields", "Matrix", "Rcpp", "RcppArmadillo", "spam"] + "depends": ["ClusterR", "Matrix", "Rcpp", "RcppArmadillo", "fields", "spam"] }, "dendRoAnalyst": { "name": "dendRoAnalyst", @@ -53723,13 +54323,13 @@ "name": "dendroNetwork", "version": "0.5.4", "sha256": "0jns6nfihb9wqz4sh8pbsy01kp0ml2x16jls4vqhixkbfpns4vkf", - "depends": ["doParallel", "dplR", "dplyr", "foreach", "igraph", "lifecycle", "RColorBrewer", "RCy3", "reshape2", "stringr", "tidyr"] + "depends": ["RColorBrewer", "RCy3", "doParallel", "dplR", "dplyr", "foreach", "igraph", "lifecycle", "reshape2", "stringr", "tidyr"] }, "dendroTools": { "name": "dendroTools", "version": "1.2.13", "sha256": "1dvisplghjyh607ns5xnwv1v8bg7i05sp4w96g6bmkwpgshaa6b0", - "depends": ["boot", "brnn", "Cubist", "dplR", "dplyr", "ggplot2", "knitr", "lubridate", "magrittr", "MLmetrics", "oce", "plotly", "psych", "randomForest", "reshape2", "scales", "viridis"] + "depends": ["Cubist", "MLmetrics", "boot", "brnn", "dplR", "dplyr", "ggplot2", "knitr", "lubridate", "magrittr", "oce", "plotly", "psych", "randomForest", "reshape2", "scales", "viridis"] }, "dendroextras": { "name": "dendroextras", @@ -53771,7 +54371,7 @@ "name": "denoiseR", "version": "1.0.2", "sha256": "1q5kxiwfkrf2k0gpidzhl4hyzyjcm33rwlw4dan9nkx1181naw9l", - "depends": ["FactoMineR", "irlba", "Matrix"] + "depends": ["FactoMineR", "Matrix", "irlba"] }, "denovolyzeR": { "name": "denovolyzeR", @@ -53783,7 +54383,7 @@ "name": "densEstBayes", "version": "1.0-2.2", "sha256": "0ydnjyprv8fz037nkfvjd8w6hg4a19lbnq4kl7yankxksjfdyqc3", - "depends": ["BH", "MASS", "nlme", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "StanHeaders", "nlme", "rstan", "rstantools"] }, "denseFLMM": { "name": "denseFLMM", @@ -53801,7 +54401,7 @@ "name": "densityClust", "version": "0.3.3", "sha256": "0iiq2zal792741z1a23h7cy9jp4hsc7513dxain132526f1yrzsl", - "depends": ["cpp11", "FNN", "ggplot2", "ggrepel", "gridExtra", "RColorBrewer", "Rtsne"] + "depends": ["FNN", "RColorBrewer", "Rtsne", "cpp11", "ggplot2", "ggrepel", "gridExtra"] }, "densityarea": { "name": "densityarea", @@ -53837,7 +54437,7 @@ "name": "depcoeff", "version": "0.0.1", "sha256": "08vs0yzfvd4ahcs5rz4i4spp8l6fg45bm0m22gn5rzxc4759mzac", - "depends": ["copula", "Rcpp"] + "depends": ["Rcpp", "copula"] }, "depend_truncation": { "name": "depend.truncation", @@ -53849,7 +54449,7 @@ "name": "depigner", "version": "0.9.1", "sha256": "0vzrdw4rhrwiyc4g4ancfd43h56b72lkvabqdwdsg54hjm35c1ky", - "depends": ["desc", "dplyr", "fs", "ggplot2", "Hmisc", "magrittr", "progress", "purrr", "readr", "rlang", "rms", "rprojroot", "stringr", "telegram_bot", "tibble", "tidyr", "usethis"] + "depends": ["Hmisc", "desc", "dplyr", "fs", "ggplot2", "magrittr", "progress", "purrr", "readr", "rlang", "rms", "rprojroot", "stringr", "telegram_bot", "tibble", "tidyr", "usethis"] }, "depmix": { "name": "depmix", @@ -53861,12 +54461,12 @@ "name": "depmixS4", "version": "1.5-0", "sha256": "1pacvhw5m4fsk3ysbal50fdqbvlaz8ywyqp6bn1wh42wipqbb2i8", - "depends": ["MASS", "nlme", "nnet", "Rsolnp"] + "depends": ["MASS", "Rsolnp", "nlme", "nnet"] }, "deps": { "name": "deps", - "version": "0.3.0", - "sha256": "1v274l8gs5by7vzgcsdsf8m3m9gkwdmw6dqvrmjx2q9j40i7wf69", + "version": "0.4.0", + "sha256": "147lb9dibn8ayj6znld64sk1qn6lzpp5pamxkagmqcbxl78r1g6h", "depends": ["jsonlite", "remotes", "renv"] }, "depth_plot": { @@ -53891,7 +54491,7 @@ "name": "desc", "version": "1.4.3", "sha256": "09ig14bm68cps6d1mrmj6hhjr01i6gz1ri35qpkwk3yp7nkqsijl", - "depends": ["cli", "R6"] + "depends": ["R6", "cli"] }, "descomponer": { "name": "descomponer", @@ -53921,7 +54521,7 @@ "name": "descriptio", "version": "1.3", "sha256": "0ic44blsi7ys6075zsawf4rxqgjsv1d7hr8y2j3psk6pjchlgx18", - "depends": ["ggplot2", "MASS", "rlang"] + "depends": ["MASS", "ggplot2", "rlang"] }, "descriptr": { "name": "descriptr", @@ -53945,13 +54545,13 @@ "name": "desctable", "version": "0.3.0", "sha256": "1i0124lnmzdbx468lyqmzbd6disxjifqjy8ss10fl8cin4f868lb", - "depends": ["dplyr", "DT", "htmltools", "pander", "rlang", "tidyr"] + "depends": ["DT", "dplyr", "htmltools", "pander", "rlang", "tidyr"] }, "deseats": { "name": "deseats", - "version": "1.0.0", - "sha256": "144906bjb4hxv5m3cf8cjpp35548icnjfzxlqj17g2sc62wx6ngl", - "depends": ["animation", "furrr", "future", "future_apply", "ggplot2", "progressr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "shiny", "zoo"] + "version": "1.1.0", + "sha256": "11qhsiqq0f1s6b7x7fmvgwwhirhilf9x37pk90pwgg3h4khjl1j5", + "depends": ["Rcpp", "RcppArmadillo", "animation", "furrr", "future", "future_apply", "ggplot2", "progressr", "purrr", "rlang", "shiny", "tidyr", "zoo"] }, "desiR": { "name": "desiR", @@ -53969,19 +54569,19 @@ "name": "designit", "version": "0.5.0", "sha256": "0h1slgxxz92zk1m6gk67s1ir95jyqzvr6mys9c9lakpffiwwn4b2", - "depends": ["assertthat", "data_table", "dplyr", "ggplot2", "purrr", "R6", "rlang", "scales", "stringr", "tibble", "tidyr"] + "depends": ["R6", "assertthat", "data_table", "dplyr", "ggplot2", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr"] }, "designmatch": { "name": "designmatch", "version": "0.5.4", "sha256": "1x3pcwml6pa56ij2bc9jymfp066v7fd2avjl6awgpy3503qr56q1", - "depends": ["highs", "lattice", "MASS", "slam"] + "depends": ["MASS", "highs", "lattice", "slam"] }, "designr": { "name": "designr", "version": "0.1.13", "sha256": "13rj2xxxxj35zl7q570c3i4p2wjpxf79dza0sg9bhbq3yal6j6r2", - "depends": ["crossdes", "dplyr", "lme4", "MASS", "tibble"] + "depends": ["MASS", "crossdes", "dplyr", "lme4", "tibble"] }, "designsize": { "name": "designsize", @@ -54011,7 +54611,7 @@ "name": "desla", "version": "0.3.0", "sha256": "18q1rw8p69p5jcqxb4hryyn2bak6pjmx91g203xrilx7k1za4p23", - "depends": ["parallelly", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "sitmo"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "parallelly", "sitmo"] }, "desplot": { "name": "desplot", @@ -54035,19 +54635,19 @@ "name": "detectR", "version": "0.3.0", "sha256": "002wv6krzmpikfmcn5bw12y7acbwvbf057i31jhsqj081spdicb0", - "depends": ["doParallel", "foreach", "glasso", "lavaan", "LogConcDEAD", "signal"] + "depends": ["LogConcDEAD", "doParallel", "foreach", "glasso", "lavaan", "signal"] }, "detectRUNS": { "name": "detectRUNS", "version": "0.9.6", "sha256": "0yl1x0jz66hingbl094picsiyrxzxvnz0grq63rva6nwn7pv1c0b", - "depends": ["data_table", "ggplot2", "gridExtra", "iterators", "itertools", "plyr", "Rcpp", "reshape2"] + "depends": ["Rcpp", "data_table", "ggplot2", "gridExtra", "iterators", "itertools", "plyr", "reshape2"] }, "detectnorm": { "name": "detectnorm", "version": "1.0.0", "sha256": "1cr5i73iigmsg0ywlm61iv1yw91vafbbf4dhvcd448qnv05cjlaw", - "depends": ["ggplot2", "nleqslv", "psych", "Rdpack", "truncnorm"] + "depends": ["Rdpack", "ggplot2", "nleqslv", "psych", "truncnorm"] }, "detector": { "name": "detector", @@ -54065,7 +54665,7 @@ "name": "detectseparation", "version": "0.3", "sha256": "05z3p1z5mhmdj5qdknz1b8f6fwbghzckl88pv79v59cfwpbvgmz8", - "depends": ["lpSolveAPI", "pkgload", "ROI", "ROI_plugin_lpsolve"] + "depends": ["ROI", "ROI_plugin_lpsolve", "lpSolveAPI", "pkgload"] }, "detourr": { "name": "detourr", @@ -54089,18 +54689,18 @@ "name": "detrendr", "version": "0.6.15", "sha256": "00j35i45a55srvdlhv0b9vcrsp44fmdv49giqm03ha015pgmsbdd", - "depends": ["arrayhelpers", "autothresholdr", "checkmate", "doParallel", "dplyr", "filesstrings", "foreach", "ijtiff", "iterators", "magrittr", "plyr", "purrr", "Rcpp", "RcppParallel", "rlang", "stringr", "withr"] + "depends": ["Rcpp", "RcppParallel", "arrayhelpers", "autothresholdr", "checkmate", "doParallel", "dplyr", "filesstrings", "foreach", "ijtiff", "iterators", "magrittr", "plyr", "purrr", "rlang", "stringr", "withr"] }, "detzrcr": { "name": "detzrcr", "version": "0.3.1", "sha256": "0afi1ir8il5xmzkpmbc2m5mvmgzlqw8qdn04gbnwl74a03yaxxmj", - "depends": ["DT", "ggplot2", "MASS", "shiny"] + "depends": ["DT", "MASS", "ggplot2", "shiny"] }, "devEMF": { "name": "devEMF", - "version": "4.4-2", - "sha256": "10gk60irfpflshzshl4vad1dynfj1hnyjycsnfa8bn0gq20ipj5x", + "version": "4.5", + "sha256": "03iwl6h6f158qc2i5b0ac9g1nnspqr958cvprjm4rgs1pcywplga", "depends": [] }, "devFunc": { @@ -54129,21 +54729,21 @@ }, "dexter": { "name": "dexter", - "version": "1.4.2", - "sha256": "196c12kmp5xjhgywr26p7k78p9mvpzz74rckfq88xgx9j012rwl7", - "depends": ["BH", "DBI", "dplyr", "dqrng", "MASS", "Rcpp", "RcppArmadillo", "rlang", "RSQLite", "sitmo", "tidyr"] + "version": "1.5.0", + "sha256": "1sppaqnv9nkxww0bw0x2sp51fl4v7845npvmhwwdh4yrnrmzbd07", + "depends": ["BH", "DBI", "MASS", "RSQLite", "Rcpp", "RcppArmadillo", "dplyr", "dqrng", "rlang", "sitmo", "tidyr"] }, "dexterMST": { "name": "dexterMST", "version": "0.9.6", "sha256": "073xx30gavig6nhi6ppll7jdgf7yvci8nv6pyxcy9vl177l1k62b", - "depends": ["crayon", "DBI", "dexter", "dplyr", "igraph", "Rcpp", "RcppArmadillo", "rlang", "RSQLite", "tidyr"] + "depends": ["DBI", "RSQLite", "Rcpp", "RcppArmadillo", "crayon", "dexter", "dplyr", "igraph", "rlang", "tidyr"] }, "dextergui": { "name": "dextergui", "version": "0.2.6", "sha256": "10v3djwani0zd27cjlf7lch7rfipnmb2p5wa7n2y5qxjqxli9z3x", - "depends": ["Cairo", "DBI", "dexter", "dplyr", "DT", "ggExtra", "ggplot2", "ggridges", "htmltools", "htmlwidgets", "jsonlite", "networkD3", "RCurl", "readODS", "readxl", "rlang", "shiny", "shinyBS", "shinyFiles", "shinyjs", "tibble", "tidyr", "writexl"] + "depends": ["Cairo", "DBI", "DT", "RCurl", "dexter", "dplyr", "ggExtra", "ggplot2", "ggridges", "htmltools", "htmlwidgets", "jsonlite", "networkD3", "readODS", "readxl", "rlang", "shiny", "shinyBS", "shinyFiles", "shinyjs", "tibble", "tidyr", "writexl"] }, "df2yaml": { "name": "df2yaml", @@ -54179,7 +54779,7 @@ "name": "dfdr", "version": "0.2.0", "sha256": "1s7i11sl6m80hryggxby4c0knzk6nxqnlwfpzgg4a2bnqnwygfya", - "depends": ["pryr", "purrr", "R6", "rlang"] + "depends": ["R6", "pryr", "purrr", "rlang"] }, "dfexpand": { "name": "dfexpand", @@ -54191,7 +54791,7 @@ "name": "dfidx", "version": "0.0-5", "sha256": "02ka119nxn9258hz51m603s0gwmdi8a98z0j9lx7fqjxnd01jlip", - "depends": ["dplyr", "Formula"] + "depends": ["Formula", "dplyr"] }, "dfmeta": { "name": "dfmeta", @@ -54203,13 +54803,13 @@ "name": "dfmirroR", "version": "2.1.0", "sha256": "0npd9yllsjbb49mqdwaw75lbgx4lr8qgga70yybd6c16wdfkg396", - "depends": ["e1071", "fitdistrplus", "MASS"] + "depends": ["MASS", "e1071", "fitdistrplus"] }, "dfms": { "name": "dfms", "version": "0.2.2", "sha256": "0p3fbvmrdrsiz3dy23i5fjldc7l5hwfh7v73sg8dkhvxxnn1ciw4", - "depends": ["collapse", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "collapse"] }, "dfmta": { "name": "dfmta", @@ -54245,13 +54845,13 @@ "name": "dfphase1", "version": "1.2.0", "sha256": "0a9cxdc81rib84sgg5mpf28nhcv1g83kvnr7rin3djyv60ccrq8x", - "depends": ["lattice", "Rcpp", "robustbase"] + "depends": ["Rcpp", "lattice", "robustbase"] }, "dfrr": { "name": "dfrr", "version": "0.1.5", "sha256": "0kgsi2jysv0hpdvmv1fng41ar7p3pgzgf1vv0dcm954jdrl2dz6d", - "depends": ["fda", "ggplot2", "MASS", "plotly", "tmvtnorm"] + "depends": ["MASS", "fda", "ggplot2", "plotly", "tmvtnorm"] }, "dfsaneacc": { "name": "dfsaneacc", @@ -54269,13 +54869,13 @@ "name": "dga", "version": "2.0.1", "sha256": "1q860hzxrbkpmnphdysx4wk1b46wjll8sw7xjsy1lxcaz9hwcnjk", - "depends": ["chron", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "chron"] }, "dggridR": { "name": "dggridR", - "version": "3.0.0", - "sha256": "1915lc81yw6ns02fi37xjqd2zbdzhdsvqqb6c9w4b6i0665yb9ja", - "depends": ["dplyr", "Rcpp", "rlang", "sf", "sp"] + "version": "3.1.0", + "sha256": "1vwmf5m1k40kk68vil280gnzh028y04wi5q3xjacyhaw8di0w9d5", + "depends": ["Rcpp", "collapse", "s2", "sf"] }, "dglars": { "name": "dglars", @@ -54317,7 +54917,7 @@ "name": "dhglm", "version": "2.0", "sha256": "1918wkylldcdxjggly3a4yh4cv2nkig5bjfx0j79av633hahlg92", - "depends": ["boot", "car", "MASS", "Matrix", "sandwich"] + "depends": ["MASS", "Matrix", "boot", "car", "sandwich"] }, "dhh": { "name": "dhh", @@ -54327,8 +54927,8 @@ }, "dhlabR": { "name": "dhlabR", - "version": "1.0.2", - "sha256": "1hqs31ddh82mx8zw8lyzcdl3x5dgpx88shjk8frzib6i4cgq48s8", + "version": "1.0.6", + "sha256": "185gp7bgaw0rhl29f2gijsqx3da3mzzp06hmi187ywv8i6lsi750", "depends": ["dplyr", "httr", "jsonlite", "purrr", "tibble", "zoo"] }, "dhsage": { @@ -54347,13 +54947,13 @@ "name": "diagL1", "version": "1.0.0", "sha256": "1rl51a5gjzf41la0rbigz4n8brn1prji6hp862hlxwscdni9w2f9", - "depends": ["conquer", "cubature", "doParallel", "foreach", "greekLetters", "lawstat", "MASS", "Matrix", "MatrixModels", "quantreg"] + "depends": ["MASS", "Matrix", "MatrixModels", "conquer", "cubature", "doParallel", "foreach", "greekLetters", "lawstat", "quantreg"] }, "diagis": { "name": "diagis", "version": "0.2.3", "sha256": "1gl720d1rrmqingsskkc86kl3n10c7cwvmx19yyxiprwzfkrjh95", - "depends": ["coda", "ggplot2", "gridExtra", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "ggplot2", "gridExtra"] }, "diagmeta": { "name": "diagmeta", @@ -54387,9 +54987,9 @@ }, "dials": { "name": "dials", - "version": "1.2.1", - "sha256": "0xrvvz4pkzmjsizjqfcvpn6f1cl9yp56lyc2iw8vcvwa18gb6szf", - "depends": ["cli", "DiceDesign", "dplyr", "glue", "hardhat", "lifecycle", "pillar", "purrr", "rlang", "scales", "tibble", "vctrs", "withr"] + "version": "1.3.0", + "sha256": "08q18cl187n98q72hnx3ildd0jk7qmrcdpcrmz7z1l0rb5iyjjj2", + "depends": ["DiceDesign", "cli", "dplyr", "glue", "hardhat", "lifecycle", "pillar", "purrr", "rlang", "scales", "sfd", "tibble", "vctrs", "withr"] }, "diaplt": { "name": "diaplt", @@ -54405,8 +55005,8 @@ }, "dibble": { "name": "dibble", - "version": "0.2.2", - "sha256": "02sf7d50a8w14xjwzdc5fq2xprlzl03yc4xs8qr4p8ycwvmlwwb1", + "version": "0.3.0", + "sha256": "1s845ii2hd0d2aam3wp3rb7r7i60plzqdmgdgix1pwbam02cfymn", "depends": ["dplyr", "memoise", "pillar", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "vctrs"] }, "dice": { @@ -54419,7 +55019,7 @@ "name": "diceR", "version": "2.2.0", "sha256": "1pfb1wxwh9li3z06hrx1zy5vwqmlmq4rjqjh1pi8i6jkbshf702m", - "depends": ["abind", "assertthat", "class", "clue", "clusterSim", "clv", "clValid", "dplyr", "ggplot2", "infotheo", "klaR", "magrittr", "mclust", "NMF", "purrr", "RankAggreg", "Rcpp", "stringr", "tidyr", "yardstick"] + "depends": ["NMF", "RankAggreg", "Rcpp", "abind", "assertthat", "clValid", "class", "clue", "clusterSim", "clv", "dplyr", "ggplot2", "infotheo", "klaR", "magrittr", "mclust", "purrr", "stringr", "tidyr", "yardstick"] }, "dichromat": { "name": "dichromat", @@ -54437,25 +55037,25 @@ "name": "dictionar6", "version": "0.1.3", "sha256": "1rg958py4pqghkid3830hla7vibvwsjhk75x55lxry5d8dp04m9f", - "depends": ["ooplah", "R6"] + "depends": ["R6", "ooplah"] }, "did": { "name": "did", "version": "2.1.2", "sha256": "07r4m326n2gmgmf5ym5y72xg1xin771172rcpk0xkz6v344lwf9j", - "depends": ["BMisc", "DRDID", "generics", "ggplot2", "ggpubr", "Matrix", "pbapply", "tidyr"] + "depends": ["BMisc", "DRDID", "Matrix", "generics", "ggplot2", "ggpubr", "pbapply", "tidyr"] }, "did2s": { "name": "did2s", "version": "1.0.2", "sha256": "0iyz6z4w2im22rvbpabql2w1cncv0pnrh0hp7agf0pazcpzk2jh6", - "depends": ["boot", "broom", "data_table", "did", "didimputation", "fixest", "ggplot2", "Matrix", "MatrixExtra", "rlang", "SparseM", "staggered"] + "depends": ["Matrix", "MatrixExtra", "SparseM", "boot", "broom", "data_table", "did", "didimputation", "fixest", "ggplot2", "rlang", "staggered"] }, "didimputation": { "name": "didimputation", "version": "0.3.0", "sha256": "122z473jkf5jb66s2g7vdqi0q56v8chz2dpl61qkcgqhv4hbh1q3", - "depends": ["broom", "data_table", "dplyr", "fixest", "glue", "magrittr", "Matrix", "purrr", "Rcpp", "RcppArmadillo", "stringr", "tidyr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "broom", "data_table", "dplyr", "fixest", "glue", "magrittr", "purrr", "stringr", "tidyr"] }, "didrooRFM": { "name": "didrooRFM", @@ -54465,8 +55065,8 @@ }, "diemr": { "name": "diemr", - "version": "1.3", - "sha256": "1abvk6hk3vnfdd4yif0n1ngw68h32r001a0v6xi4n9qi72g82p9j", + "version": "1.4", + "sha256": "1s7ljcgrffb11cd0w2amrdyp75a8m9cv3g8zwizk2gll6p0yqpgg", "depends": ["vcfR", "zoo"] }, "dietr": { @@ -54485,7 +55085,7 @@ "name": "difNLR", "version": "1.4.2-1", "sha256": "1wrvsjbvvqwpv7cwc445n7l4ly8gvj8hyd66k02ib8r5854zn192", - "depends": ["calculus", "ggplot2", "msm", "nnet", "plyr", "VGAM"] + "depends": ["VGAM", "calculus", "ggplot2", "msm", "nnet", "plyr"] }, "difR": { "name": "difR", @@ -54557,7 +55157,7 @@ "name": "diffmatchpatch", "version": "0.1.0", "sha256": "064p2xzv0x890pw24lm9fmafp0x93f3yv77ms2zabzlclfylzzb7", - "depends": ["cli", "Rcpp"] + "depends": ["Rcpp", "cli"] }, "diffobj": { "name": "diffobj", @@ -54581,7 +55181,7 @@ "name": "diffudist", "version": "1.0.1", "sha256": "0s8k949l7fvdy0c1zlrk4zr5dnxksq67spwg8mpdsyc2xchh7b5c", - "depends": ["expm", "ggdendro", "ggplot2", "igraph", "Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "reshape2", "rlang", "viridis"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "expm", "ggdendro", "ggplot2", "igraph", "reshape2", "rlang", "viridis"] }, "diffusion": { "name": "diffusion", @@ -54593,7 +55193,7 @@ "name": "diffusionMap", "version": "1.2.0", "sha256": "1rvk7069brlm1s9kqj4c31mwwr3mw4hmhay95cjjjfmw5xclff2j", - "depends": ["igraph", "Matrix", "scatterplot3d"] + "depends": ["Matrix", "igraph", "scatterplot3d"] }, "diffval": { "name": "diffval", @@ -54609,14 +55209,14 @@ }, "digest": { "name": "digest", - "version": "0.6.35", - "sha256": "07vqv2mnf8ppan2a3gydh4yr84n8489hypfas1rlk7050nxkycyc", + "version": "0.6.36", + "sha256": "0dz6gbfd9qnhn1jjfc4ni3w440183dygla4lszwkz2rmn9j76xyi", "depends": [] }, "digiRhythm": { "name": "digiRhythm", - "version": "1.2", - "sha256": "0bchk3vqdvn6hnw6cglsr7i7nvcdk5c4kyw4jainq08i7zc4jwsv", + "version": "2.2", + "sha256": "1z8arjp4pk8iq7jwigyh7bxfd33dhdxc9blmy1j8kssml152ilhn", "depends": ["crayon", "dplyr", "ggplot2", "lubridate", "magrittr", "pracma", "readr", "stringr", "tidyr", "xts", "zoo"] }, "digitTests": { @@ -54629,7 +55229,7 @@ "name": "digitalDLSorteR", "version": "1.0.1", "sha256": "05wcvv68p55hxf9babr19528khky1pmgfbvm502qhk7ba1arzivf", - "depends": ["dplyr", "ggplot2", "ggpubr", "grr", "gtools", "keras", "Matrix", "pbapply", "reshape2", "reticulate", "rlang", "S4Vectors", "scran", "scuttle", "SingleCellExperiment", "SummarizedExperiment", "tensorflow", "tidyr", "zinbwave"] + "depends": ["Matrix", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "ggplot2", "ggpubr", "grr", "gtools", "keras", "pbapply", "reshape2", "reticulate", "rlang", "scran", "scuttle", "tensorflow", "tidyr", "zinbwave"] }, "digitalPCR": { "name": "digitalPCR", @@ -54657,9 +55257,9 @@ }, "dimensio": { "name": "dimensio", - "version": "0.8.0", - "sha256": "0xrlik2f08j76q542dgzwi597qavync7qnv2nzlk2blgcgd9i8g0", - "depends": ["arkhe"] + "version": "0.8.1", + "sha256": "1vk3maraqipmdk8jv22nxmkj6ab7lr2z4if49398irdmvyk8g7l8", + "depends": ["arkhe", "khroma"] }, "dimensionsR": { "name": "dimensionsR", @@ -54689,7 +55289,7 @@ "name": "dineq", "version": "0.1.0", "sha256": "1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl", - "depends": ["boot", "Hmisc"] + "depends": ["Hmisc", "boot"] }, "dint": { "name": "dint", @@ -54707,13 +55307,13 @@ "name": "diproperm", "version": "0.2.0", "sha256": "0qh8zzpbsjfwh8q833n5pchb6dakqdza77ab7vmsidfbzndka11m", - "depends": ["dplyr", "DWDLargeR", "e1071", "ggplot2", "gridExtra", "lemon", "Matrix", "sampling", "SparseM", "usethis"] + "depends": ["DWDLargeR", "Matrix", "SparseM", "dplyr", "e1071", "ggplot2", "gridExtra", "lemon", "sampling", "usethis"] }, "dipsaus": { "name": "dipsaus", - "version": "0.2.8", - "sha256": "1gmb5jlvxwhj2ryqgvw8mfq30h414cgsa9jf6psz4qrr5dssh98l", - "depends": ["base64enc", "cli", "digest", "fastmap", "future", "future_apply", "jsonlite", "progressr", "R6", "Rcpp", "rlang", "rstudioapi", "shiny", "stringr"] + "version": "0.2.9", + "sha256": "12bhxys313iqrfkd0cpr2ibv94v14vjj3sxkhvhxqhclf1d19qc6", + "depends": ["R6", "Rcpp", "base64enc", "cli", "digest", "fastmap", "future", "future_apply", "jsonlite", "progressr", "rlang", "rstudioapi", "shiny", "stringr"] }, "diptest": { "name": "diptest", @@ -54725,7 +55325,7 @@ "name": "dipw", "version": "0.1.0", "sha256": "0nxjwiffi1ivafzha3c35kjk36ai7na0nbfl6x3gpsi2km7b84nd", - "depends": ["glmnet", "Matrix", "Rmosek"] + "depends": ["Matrix", "Rmosek", "glmnet"] }, "directPA": { "name": "directPA", @@ -54767,19 +55367,19 @@ "name": "dirttee", "version": "1.0.2", "sha256": "1kmchjvm5x3gsvq2dqxr4di2l607j1ivsm75zwggaiwi8yjz9s4c", - "depends": ["expectreg", "formula_tools", "MASS", "Matrix", "mgcv", "nloptr", "provenance", "rlang", "survival"] + "depends": ["MASS", "Matrix", "expectreg", "formula_tools", "mgcv", "nloptr", "provenance", "rlang", "survival"] }, "disaggR": { "name": "disaggR", - "version": "1.0.5.2", - "sha256": "11lj0x7mq3lmsg03anyk3jnkl0calgipyar2d76rb2x13b33v3kd", + "version": "1.0.5.3", + "sha256": "1i2in27gygmh1l05371hzbf8zssgsjl6jyljsr964gk02l0ghkpn", "depends": ["RColorBrewer"] }, "disaggregation": { "name": "disaggregation", "version": "0.3.0", "sha256": "052l1bky89a9cb6bh22lcksijbri9wdv3pw4wh51c7a8ah9zdqbr", - "depends": ["cowplot", "dplyr", "fmesher", "ggplot2", "Matrix", "RcppEigen", "sf", "sparseMVN", "splancs", "terra", "tidyterra", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "cowplot", "dplyr", "fmesher", "ggplot2", "sf", "sparseMVN", "splancs", "terra", "tidyterra"] }, "disastr_api": { "name": "disastr.api", @@ -54791,7 +55391,7 @@ "name": "disbayes", "version": "1.1.0", "sha256": "0dzgs048pwpl59fpnvqdra001xkwllxpkaxanwdbmzc8l1xmrwb2", - "depends": ["BH", "dplyr", "generics", "ggplot2", "loo", "magrittr", "matrixStats", "mgcv", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "SHELF", "StanHeaders", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "SHELF", "StanHeaders", "dplyr", "generics", "ggplot2", "loo", "magrittr", "matrixStats", "mgcv", "rstan", "tibble", "tidyr"] }, "discAUC": { "name": "discAUC", @@ -54809,7 +55409,7 @@ "name": "discSurv", "version": "2.0.0", "sha256": "0k585cyz02vqk4w7w20rhn6g9rspmmlbdpv7k837021iyhwwb838", - "depends": ["data_table", "functional", "geepack", "mgcv", "mvnfast", "mvtnorm", "ranger", "Rdpack", "rpart", "treeClust", "VGAM"] + "depends": ["Rdpack", "VGAM", "data_table", "functional", "geepack", "mgcv", "mvnfast", "mvtnorm", "ranger", "rpart", "treeClust"] }, "discfrail": { "name": "discfrail", @@ -54821,7 +55421,7 @@ "name": "discharge", "version": "1.0.0", "sha256": "1hwsdrbajmpfdc9arb1pjhx2w45dy3zrba9ibcrnpyqhhr4i1c5m", - "depends": ["boot", "checkmate", "CircStats", "ggplot2", "lmom"] + "depends": ["CircStats", "boot", "checkmate", "ggplot2", "lmom"] }, "disclap": { "name": "disclap", @@ -54833,25 +55433,25 @@ "name": "disclapmix", "version": "1.7.4", "sha256": "1rc5kv4abx1hxgkp3vb3f247nv887vrh9l2y189blq0p6k258575", - "depends": ["cluster", "disclap", "MASS", "Rcpp", "RcppProgress"] + "depends": ["MASS", "Rcpp", "RcppProgress", "cluster", "disclap"] }, "disclapmix2": { "name": "disclapmix2", "version": "0.6.1", "sha256": "0lqg4wvx7jf4an2x3lq9486m5741djkw8q506vbn8xlh4gxwmp3s", - "depends": ["cluster", "Rcpp"] + "depends": ["Rcpp", "cluster"] }, "disclosuR": { "name": "disclosuR", "version": "0.6.0", "sha256": "0s1j8j2jyvdr15wysi9y7yin5rz06hgd5rlqxpxz5zc8nyvar69r", - "depends": ["dplyr", "lubridate", "pdftools", "qdap", "rlang", "SentimentAnalysis", "SnowballC", "stringi", "stringr", "syuzhet", "tm", "zoo"] + "depends": ["SentimentAnalysis", "SnowballC", "dplyr", "lubridate", "pdftools", "qdap", "rlang", "stringi", "stringr", "syuzhet", "tm", "zoo"] }, "discnorm": { "name": "discnorm", "version": "0.2.1", "sha256": "05pzrrv2pwd3m15f8qxy0m2gsam3qw71bvapf061rbw1lzmr62b6", - "depends": ["arules", "copula", "cubature", "GoFKernel", "lavaan", "MASS", "mnormt", "pbivnorm", "sirt"] + "depends": ["GoFKernel", "MASS", "arules", "copula", "cubature", "lavaan", "mnormt", "pbivnorm", "sirt"] }, "discord": { "name": "discord", @@ -54863,13 +55463,13 @@ "name": "discourseGT", "version": "1.2.0", "sha256": "00s7bcwc5mdra5wwf3wac6s0bj2n6ryqfx7bv2zji6fp0h4ya4wc", - "depends": ["dplyr", "GGally", "ggplot2", "ggrepel", "igraph", "network"] + "depends": ["GGally", "dplyr", "ggplot2", "ggrepel", "igraph", "network"] }, "discoveR": { "name": "discoveR", "version": "3.1.2", "sha256": "1smy2bzzqc4nvrd4qj2sq4d1f0pvbm4nixxh8xpy22lwwa8pkd24", - "depends": ["cluster", "colourpicker", "config", "DT", "echarts4r", "FactoMineR", "ggdendro", "ggplot2", "golem", "htmltools", "htmlwidgets", "loadeR", "plotly", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs"] + "depends": ["DT", "FactoMineR", "cluster", "colourpicker", "config", "echarts4r", "ggdendro", "ggplot2", "golem", "htmltools", "htmlwidgets", "loadeR", "plotly", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs"] }, "discoverableresearch": { "name": "discoverableresearch", @@ -54921,33 +55521,33 @@ }, "diseasystore": { "name": "diseasystore", - "version": "0.2.1", - "sha256": "17ypayb3bnan6ar6yv3n1l56yb3wzxpj7vc1fzbkxg1pgqrm43jg", - "depends": ["checkmate", "DBI", "dbplyr", "dplyr", "glue", "ISOweek", "jsonlite", "lubridate", "purrr", "R6", "readr", "rlang", "SCDB", "stringr", "tidyr", "tidyselect", "zoo"] + "version": "0.2.2", + "sha256": "1024r1p4wawcg1346vk91xk7x5hxasliiyjp2y0nk085s4lb7s96", + "depends": ["DBI", "ISOweek", "R6", "SCDB", "checkmate", "dbplyr", "dplyr", "glue", "jsonlite", "lubridate", "purrr", "readr", "rlang", "stringr", "tidyr", "tidyselect", "zoo"] }, "disk_frame": { "name": "disk.frame", "version": "0.8.3", "sha256": "0mkzvxbjr9iw2bmnw4s5s7glly1nnf4j83y6yzw5vg1gwqghynky", - "depends": ["arrow", "benchmarkme", "bigreadr", "bit64", "crayon", "data_table", "dplyr", "fs", "fst", "future", "future_apply", "globals", "glue", "jsonlite", "pryr", "purrr", "Rcpp", "rlang", "stringr"] + "depends": ["Rcpp", "arrow", "benchmarkme", "bigreadr", "bit64", "crayon", "data_table", "dplyr", "fs", "fst", "future", "future_apply", "globals", "glue", "jsonlite", "pryr", "purrr", "rlang", "stringr"] }, "dismo": { "name": "dismo", "version": "1.3-14", "sha256": "1msc75xnc9lbnn8pivd5j4jvb1b9p3xgybfm2ak2mpb2aplz5837", - "depends": ["raster", "Rcpp", "sp", "terra"] + "depends": ["Rcpp", "raster", "sp", "terra"] }, "disordR": { "name": "disordR", "version": "0.9-8.2", "sha256": "07ydnyifqdsan0kp74mlxaviwj4ccnsh77z36gsh2cpyhda2la8d", - "depends": ["digest", "Matrix"] + "depends": ["Matrix", "digest"] }, "dispRity": { "name": "dispRity", "version": "1.8", "sha256": "0hng3g5mq75b7rvdypnz816xahbfa4fgyi2n6drxma258qskyd68", - "depends": ["ade4", "ape", "castor", "Claddis", "ellipse", "geometry", "GET", "MASS", "mnormt", "phangorn", "phyclust", "phylolm", "scales", "vegan", "zoo"] + "depends": ["Claddis", "GET", "MASS", "ade4", "ape", "castor", "ellipse", "geometry", "mnormt", "phangorn", "phyclust", "phylolm", "scales", "vegan", "zoo"] }, "disparityfilter": { "name": "disparityfilter", @@ -55007,12 +55607,12 @@ "name": "distTails", "version": "0.1.2", "sha256": "10p7rfqfkhcwq10lhz3cq9i4k1jdccks4y3791lajljsxz5jrca4", - "depends": ["ercv", "gsl", "MASS"] + "depends": ["MASS", "ercv", "gsl"] }, "distances": { "name": "distances", - "version": "0.1.10", - "sha256": "0rni8naaryvhmldk8zflwlb4kdrvjfcmfb0j5nxfm4yndqad557b", + "version": "0.1.11", + "sha256": "0v2i1q16kcxr1v988zcgpqgrwvagzfcafzxjkkz06x72j8s63jrd", "depends": [] }, "distanceto": { @@ -55025,13 +55625,13 @@ "name": "distantia", "version": "1.0.2", "sha256": "12d6xzhcxs3xxyj82ih6chrr638siy45gna1s22vhnqvjd5jixc6", - "depends": ["arrangements", "data_table", "doParallel", "fields", "foreach", "iterators", "plyr", "RColorBrewer", "viridis"] + "depends": ["RColorBrewer", "arrangements", "data_table", "doParallel", "fields", "foreach", "iterators", "plyr", "viridis"] }, "distcomp": { "name": "distcomp", "version": "1.3-3", "sha256": "01h8cczkb0vb6560rh4czvajwa7gbgp41pl2b5xw7a68cbjizv8n", - "depends": ["digest", "dplyr", "gmp", "homomorpheR", "httr", "jsonlite", "magrittr", "R6", "rlang", "shiny", "stringr", "survival"] + "depends": ["R6", "digest", "dplyr", "gmp", "homomorpheR", "httr", "jsonlite", "magrittr", "rlang", "shiny", "stringr", "survival"] }, "distcrete": { "name": "distcrete", @@ -55061,7 +55661,7 @@ "name": "distillML", "version": "0.1.0.13", "sha256": "05pk6g3bjaw0ghb673yxfvnijqkvjy4bfxk2vpiwccm7hjszl62s", - "depends": ["checkmate", "data_table", "dplyr", "ggplot2", "glmnet", "gridExtra", "mltools", "purrr", "R6", "Rforestry", "tidyr"] + "depends": ["R6", "Rforestry", "checkmate", "data_table", "dplyr", "ggplot2", "glmnet", "gridExtra", "mltools", "purrr", "tidyr"] }, "distillery": { "name": "distillery", @@ -55085,7 +55685,7 @@ "name": "distops", "version": "0.1.0", "sha256": "02r6zf4jmk29879gvlxg7mh0lf9r8d340vb48md2swis25nidgx1", - "depends": ["cli", "desc", "fs", "glue", "Rcpp", "RcppParallel", "usethis"] + "depends": ["Rcpp", "RcppParallel", "cli", "desc", "fs", "glue", "usethis"] }, "distory": { "name": "distory", @@ -55103,7 +55703,7 @@ "name": "distrDoc", "version": "2.8.2", "sha256": "0acbmh2lxf82527gm4i3vvh8gqfdnycsmdnf0s5pwz29zs6ql12z", - "depends": ["distr", "distrEx", "distrMod", "distrSim", "distrTeach", "distrTEst", "MASS", "RandVar", "startupmsg"] + "depends": ["MASS", "RandVar", "distr", "distrEx", "distrMod", "distrSim", "distrTEst", "distrTeach", "startupmsg"] }, "distrEllipse": { "name": "distrEllipse", @@ -55121,7 +55721,7 @@ "name": "distrMod", "version": "2.9.1", "sha256": "0gpa19xdw4gl8impn9lq8xxc8qwzs1wygfglzfn7hjin8l588avj", - "depends": ["distr", "distrEx", "MASS", "RandVar", "sfsmisc", "startupmsg"] + "depends": ["MASS", "RandVar", "distr", "distrEx", "sfsmisc", "startupmsg"] }, "distrRmetrics": { "name": "distrRmetrics", @@ -55169,7 +55769,7 @@ "name": "distributionsrd", "version": "0.0.6", "sha256": "0ykzxcxh5l9l5z3546iqlllryw2xyixz1hiynx19k8bsn8k7dxyp", - "depends": ["flexmix", "modeltools", "Rdpack"] + "depends": ["Rdpack", "flexmix", "modeltools"] }, "distro": { "name": "distro", @@ -55181,7 +55781,7 @@ "name": "distrom", "version": "1.0.1", "sha256": "1j8k8cgh5r8av8jf8miq858j66hmkkcdjqhia77iivx97fg9pcjk", - "depends": ["gamlr", "Matrix"] + "depends": ["Matrix", "gamlr"] }, "distrr": { "name": "distrr", @@ -55223,7 +55823,7 @@ "name": "diveMove", "version": "1.6.2", "sha256": "04naajbri3jrdcggh7ja1niyqb4l2afawpcw5nay0bx7823i5nhq", - "depends": ["geosphere", "KernSmooth", "plotly", "quantreg", "uniReg"] + "depends": ["KernSmooth", "geosphere", "plotly", "quantreg", "uniReg"] }, "diveR": { "name": "diveR", @@ -55247,19 +55847,19 @@ "name": "diversitree", "version": "0.10-0", "sha256": "1xl2swbmgpni2y2divl29xh702b88kxgcswa47g62ny59gh2fdn1", - "depends": ["ape", "deSolve", "Rcpp", "subplex"] + "depends": ["Rcpp", "ape", "deSolve", "subplex"] }, "diversityForest": { "name": "diversityForest", "version": "0.4.0", "sha256": "1yp9lwr5sj8mv1sxrrjsx00m2aq02xcs3q06v51h29g686rdij0f", - "depends": ["gam", "ggplot2", "ggpubr", "MapGAM", "Matrix", "nnet", "RColorBrewer", "Rcpp", "RcppEigen", "rlang", "rms", "scales", "sgeostat", "survival"] + "depends": ["MapGAM", "Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "gam", "ggplot2", "ggpubr", "nnet", "rlang", "rms", "scales", "sgeostat", "survival"] }, "divest": { "name": "divest", "version": "1.0.0", "sha256": "1qm2m4dxh1rlxbr9y1vpyhngxyawi2ll72s5ayiaik6rgr5jd2cp", - "depends": ["Rcpp", "RNifti"] + "depends": ["RNifti", "Rcpp"] }, "divo": { "name": "divo", @@ -55283,7 +55883,7 @@ "name": "divvy", "version": "1.0.0", "sha256": "03s76pkywxcx6kkdq7dpa0l2rvhwibzp48sb9mqbbhf713a621pi", - "depends": ["iNEXT", "Rdpack", "sf", "terra", "units", "vegan"] + "depends": ["Rdpack", "iNEXT", "sf", "terra", "units", "vegan"] }, "dixon": { "name": "dixon", @@ -55313,7 +55913,7 @@ "name": "dlbayes", "version": "0.1.0", "sha256": "058kkh67npai2ffrjdpjn4pzj8f233znl16nj6yx8wz8lkb17cb0", - "depends": ["expm", "GIGrvg", "glmnet", "LaplacesDemon", "MASS"] + "depends": ["GIGrvg", "LaplacesDemon", "MASS", "expm", "glmnet"] }, "dlib": { "name": "dlib", @@ -55337,7 +55937,7 @@ "name": "dlmtree", "version": "1.0.0", "sha256": "01nzhi1ysbvfl8f3asba9l2n72aidk632njv5m50k9xjfcjhayqb", - "depends": ["dplyr", "ggplot2", "mgcv", "Rcpp", "RcppArmadillo", "RcppEigen", "shiny", "shinythemes", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "dplyr", "ggplot2", "mgcv", "shiny", "shinythemes", "tidyr"] }, "dlnm": { "name": "dlnm", @@ -55361,13 +55961,13 @@ "name": "dlsem", "version": "2.4.6", "sha256": "1h3bwqqpfjkl41b2mbfhsj0pi9kri0h0i28wiid6arjrmm87nsf8", - "depends": ["graph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph"] }, "dlstats": { "name": "dlstats", "version": "0.1.7", "sha256": "1qc7gp2glkbhnblqckz3l7jmlsarf3jlsp6cqm4wm0s87z038r9a", - "depends": ["ggplot2", "jsonlite", "magrittr", "RColorBrewer", "scales"] + "depends": ["RColorBrewer", "ggplot2", "jsonlite", "magrittr", "scales"] }, "dm": { "name": "dm", @@ -55391,19 +55991,19 @@ "name": "dmbc", "version": "1.0.2", "sha256": "0crwmprmn4k565zwvwwqkf70j6f166rvhssx0pwrmch935ascpsf", - "depends": ["abind", "bayesplot", "coda", "ggplot2", "ggrepel", "modeltools", "Rcpp", "RcppArmadillo", "RcppProgress", "robustbase", "robustX"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "abind", "bayesplot", "coda", "ggplot2", "ggrepel", "modeltools", "robustX", "robustbase"] }, "dmetatools": { "name": "dmetatools", "version": "1.1.1", "sha256": "0n62lfga8br3p3vn10rs56mbrbsrr7b6m8cb15za52nm2qn9m3a5", - "depends": ["mada", "MASS"] + "depends": ["MASS", "mada"] }, "dml": { "name": "dml", "version": "1.1.0", "sha256": "0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l", - "depends": ["lfda", "MASS"] + "depends": ["MASS", "lfda"] }, "dmlalg": { "name": "dmlalg", @@ -55433,7 +56033,7 @@ "name": "dmutate", "version": "0.1.3", "sha256": "1dxx4v9fg0cd2m5lwk3j6n9g6n9zqr7rs75yiz3m3q8cpw1pjqpk", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "dndR": { "name": "dndR", @@ -55451,7 +56051,7 @@ "name": "dnn", "version": "0.0.6", "sha256": "0mij6d69hhzrcp3yvqwmajhn4bm2bnc3lk9hrkh5ly2a21g46yg4", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "survival"] }, "dnr": { "name": "dnr", @@ -55467,9 +56067,9 @@ }, "doBy": { "name": "doBy", - "version": "4.6.21", - "sha256": "01s9kls9j1nvygh0cc2bfd6n5sjccaalvfw3zx8sv7r2p4clgsij", - "depends": ["boot", "broom", "cowplot", "Deriv", "dplyr", "ggplot2", "MASS", "Matrix", "microbenchmark", "modelr", "pbkrtest", "rlang", "tibble", "tidyr"] + "version": "4.6.22", + "sha256": "038b1gs039br4xzv6axij2fzdzahmk718qm4akg77bwqvqvf59ra", + "depends": ["Deriv", "MASS", "Matrix", "boot", "broom", "cowplot", "dplyr", "ggplot2", "microbenchmark", "modelr", "rlang", "tibble", "tidyr"] }, "doFuture": { "name": "doFuture", @@ -55487,7 +56087,7 @@ "name": "doMPI", "version": "0.2.2", "sha256": "0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938", - "depends": ["foreach", "iterators", "Rmpi"] + "depends": ["Rmpi", "foreach", "iterators"] }, "doParallel": { "name": "doParallel", @@ -55529,7 +56129,7 @@ "name": "doc2concrete", "version": "0.6.0", "sha256": "13rgh3s13bbjgw3svh4sxz3kpv08p9gwxi9g55lb377nxachdzxr", - "depends": ["english", "glmnet", "quanteda", "SnowballC", "stringi", "stringr", "textstem", "tm"] + "depends": ["SnowballC", "english", "glmnet", "quanteda", "stringi", "stringr", "textstem", "tm"] }, "doc2vec": { "name": "doc2vec", @@ -55539,9 +56139,15 @@ }, "dockerfiler": { "name": "dockerfiler", - "version": "0.2.2", - "sha256": "0j5j93hbqgc9qscadldk8j2knx87q2l91fwsjhh792jflvwxgfzi", - "depends": ["attempt", "cli", "desc", "fs", "glue", "jsonlite", "memoise", "pak", "pkgbuild", "R6", "remotes", "usethis"] + "version": "0.2.3", + "sha256": "1fy9mdq24v48vv3fkglwv1rqhlm4chlgli6d7arw0wa9s4h9bh2z", + "depends": ["R6", "attempt", "cli", "desc", "fs", "glue", "jsonlite", "memoise", "pak", "pkgbuild", "purrr", "remotes", "usethis"] + }, + "docket": { + "name": "docket", + "version": "1.33", + "sha256": "0hwmnclknik9pkzncbnqabvln276lcyb3rh5dy1wxibq85qax84f", + "depends": ["XML", "stringr", "xml2", "zip"] }, "docknitr": { "name": "docknitr", @@ -55611,9 +56217,9 @@ }, "dodgr": { "name": "dodgr", - "version": "0.4.0", - "sha256": "0r1p2zj6f2y6v2mk59apas8hcxcfxg6b2mniz5d6nnq074a57s9m", - "depends": ["callr", "digest", "fs", "magrittr", "memoise", "osmdata", "Rcpp", "RcppParallel", "RcppThread"] + "version": "0.4.1", + "sha256": "12vsw3yi99jalhz41fiq67fhb4jk0rrcfwb06gfkrifalp2p9jws", + "depends": ["Rcpp", "RcppParallel", "RcppThread", "callr", "digest", "fs", "magrittr", "memoise", "osmdata"] }, "doebioresearch": { "name": "doebioresearch", @@ -55631,7 +56237,7 @@ "name": "dogesr", "version": "0.5.0", "sha256": "0w5qps781c406br5rba6mv127yrlgq7rzchk55j7mndrm7hwia63", - "depends": ["dplyr", "ggplot2", "ggthemes", "igraph", "knitr", "qpdf", "Rdpack", "rmarkdown"] + "depends": ["Rdpack", "dplyr", "ggplot2", "ggthemes", "igraph", "knitr", "qpdf", "rmarkdown"] }, "dominanceanalysis": { "name": "dominanceanalysis", @@ -55673,7 +56279,7 @@ "name": "doolkit", "version": "1.42.2", "sha256": "0hyqbpnhzjsx7ml0z6n9z60yhp5c0dyicm3jfc841aykvb1ifqbp", - "depends": ["concaveman", "ggplot2", "igraph", "MASS", "Morpho", "rgl", "Rvcg", "sp", "tis", "usethis"] + "depends": ["MASS", "Morpho", "Rvcg", "concaveman", "ggplot2", "igraph", "rgl", "sp", "tis", "usethis"] }, "doremi": { "name": "doremi", @@ -55689,15 +56295,15 @@ }, "dosearch": { "name": "dosearch", - "version": "1.0.8", - "sha256": "1jymk03snrfmr9da7h7l9823mzlcn6y4z6ay6nzi82n08d9xmp06", + "version": "1.0.11", + "sha256": "0ghwk0h9rrfg4i6xdiybirqvrpzm3rv0w41jqqlhm43jf7796pmj", "depends": ["Rcpp"] }, "dosedesignR": { "name": "dosedesignR", "version": "0.3.0", "sha256": "0s25nv3vdbnl1sn8gdhr45l7paiby452b2986xfkc3cvrdlsrhjw", - "depends": ["DoseFinding", "DT", "ggplot2", "kableExtra", "knitr", "latticeExtra", "purrr", "readxl", "Rsolnp", "shiny", "shinyBS", "shinyjs", "shinyWidgets", "stringr"] + "depends": ["DT", "DoseFinding", "Rsolnp", "ggplot2", "kableExtra", "knitr", "latticeExtra", "purrr", "readxl", "shiny", "shinyBS", "shinyWidgets", "shinyjs", "stringr"] }, "doseminer": { "name": "doseminer", @@ -55739,7 +56345,7 @@ "name": "dotprofile", "version": "0.0.1", "sha256": "10vm8s1sk4i2930zzswgwy1y873x8byfr7xfb8xq6cdk9ci7l741", - "depends": ["cli", "R6"] + "depends": ["R6", "cli"] }, "dots": { "name": "dots", @@ -55767,9 +56373,9 @@ }, "doublIn": { "name": "doublIn", - "version": "0.1.0", - "sha256": "04y1kq6f39kjp7i8hr52a93103nf2dpvkj34w4s0fvaqmw1h44b3", - "depends": ["coda", "dplyr", "DT", "epicontacts", "flexsurv", "ggplot2", "lubridate", "magrittr", "mStats", "plotly", "rjags", "shiny", "shinydashboard", "shinythemes", "shinyWidgets", "tidyverse", "visNetwork", "xtable"] + "version": "0.2.0", + "sha256": "0x22q6i07f49cjyhy9i2b9h818sgadxbhb6zwym2qilgf3mxj57g", + "depends": ["DT", "coda", "dplyr", "epicontacts", "flexsurv", "ggplot2", "lubridate", "mStats", "magrittr", "plotly", "rjags", "shiny", "shinyWidgets", "shinydashboard", "shinythemes", "tidyverse", "visNetwork", "xtable"] }, "double_truncation": { "name": "double.truncation", @@ -55803,27 +56409,27 @@ }, "downloadthis": { "name": "downloadthis", - "version": "0.3.3", - "sha256": "14c85cradmm187jzwf3njgshmzq53xr4dla39dkxmhnw07mgdw4l", - "depends": ["base64enc", "bsplus", "fs", "ggplot2", "htmltools", "magrittr", "mime", "readr", "writexl", "zip"] + "version": "0.4.0", + "sha256": "0hl0xgvlami8q265kyc9nfi916qyr5wh3422rzz3pl5razv09pdp", + "depends": ["b64", "bsplus", "fs", "ggplot2", "htmltools", "magrittr", "mime", "readr", "writexl", "zip"] }, "downscale": { "name": "downscale", "version": "5.0.0", "sha256": "1rcmn5f30l004rp8a7pmn0w5izsy31n9lwsk3sgj01fjzk0333wc", - "depends": ["cubature", "minpack_lm", "Rmpfr", "sf", "terra"] + "depends": ["Rmpfr", "cubature", "minpack_lm", "sf", "terra"] }, "downsize": { "name": "downsize", "version": "0.2.3", "sha256": "0yx62nx5ga835ng9gwrkwivxjhjrkygdldnd1hswc6wnvfs1qz8s", - "depends": ["magrittr", "R_utils"] + "depends": ["R_utils", "magrittr"] }, "dowser": { "name": "dowser", "version": "2.2.0", "sha256": "05fjca2zfa66fq360swywmncjxz7pvjp0d5h7a0axinvy9wiccg6", - "depends": ["alakazam", "ape", "Biostrings", "dplyr", "ggplot2", "ggtree", "gridExtra", "markdown", "phangorn", "phylotate", "RColorBrewer", "rlang", "shazam", "stringr", "tidyr", "tidyselect"] + "depends": ["Biostrings", "RColorBrewer", "alakazam", "ape", "dplyr", "ggplot2", "ggtree", "gridExtra", "markdown", "phangorn", "phylotate", "rlang", "shazam", "stringr", "tidyr", "tidyselect"] }, "dparser": { "name": "dparser", @@ -55841,13 +56447,13 @@ "name": "dplR", "version": "1.7.7", "sha256": "1gdjrpa0x6clafiybqcc7119i350k2hx34j5ksgljwr7lb9a8d8f", - "depends": ["boot", "digest", "lattice", "Matrix", "matrixStats", "png", "R_utils", "signal", "stringi", "stringr", "XML"] + "depends": ["Matrix", "R_utils", "XML", "boot", "digest", "lattice", "matrixStats", "png", "signal", "stringi", "stringr"] }, "dplyr": { "name": "dplyr", "version": "1.1.4", "sha256": "1jsq8pj12bngy66xms486j8a65wxvyqs944q9rxkiaylsla08wyg", - "depends": ["cli", "generics", "glue", "lifecycle", "magrittr", "pillar", "R6", "rlang", "tibble", "tidyselect", "vctrs"] + "depends": ["R6", "cli", "generics", "glue", "lifecycle", "magrittr", "pillar", "rlang", "tibble", "tidyselect", "vctrs"] }, "dplyrAssist": { "name": "dplyrAssist", @@ -55859,7 +56465,7 @@ "name": "dpm", "version": "1.2.0", "sha256": "1wg492r19rd1hplq6ccngwr0z615m4yx5jln0v01gbz4pm47dpmi", - "depends": ["crayon", "dplyr", "Formula", "jtools", "lavaan", "panelr", "rlang", "stringr"] + "depends": ["Formula", "crayon", "dplyr", "jtools", "lavaan", "panelr", "rlang", "stringr"] }, "dpmr": { "name": "dpmr", @@ -55877,7 +56483,7 @@ "name": "dprop", "version": "0.1.0", "sha256": "0fvghjblm6giq72qqn20qwlw4ki9lrxagsy0jjbiinf51rdrhc8y", - "depends": ["extraDistr", "VaRES"] + "depends": ["VaRES", "extraDistr"] }, "dpseg": { "name": "dpseg", @@ -55901,7 +56507,7 @@ "name": "dr4pl", "version": "2.0.0", "sha256": "1nmy8mxxrmwzw826wvnn4rrm64xal9jr160yqiqj41zmb241q4b6", - "depends": ["generics", "ggplot2", "glue", "Matrix", "Rdpack", "rlang", "tensor"] + "depends": ["Matrix", "Rdpack", "generics", "ggplot2", "glue", "rlang", "tensor"] }, "dracor": { "name": "dracor", @@ -55967,7 +56573,7 @@ "name": "drc", "version": "3.0-1", "sha256": "0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y", - "depends": ["car", "gtools", "MASS", "multcomp", "plotrix", "scales"] + "depends": ["MASS", "car", "gtools", "multcomp", "plotrix", "scales"] }, "drcSeedGerm": { "name": "drcSeedGerm", @@ -55979,19 +56585,19 @@ "name": "drcarlate", "version": "1.2.0", "sha256": "05yfyjkxrayz9cmlk7qnbcqgjfxnbkmc2wkbarr9l8m47zzhda8n", - "depends": ["glmnet", "MASS", "pracma", "purrr", "splus2R", "stringr"] + "depends": ["MASS", "glmnet", "pracma", "purrr", "splus2R", "stringr"] }, "drclust": { "name": "drclust", "version": "0.1", "sha256": "04qi123vdj33dfhgxmwc0c2viwa74lr4x1kj85rgbvvsqhwnp1kz", - "depends": ["cluster", "factoextra", "fpc", "pheatmap", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "cluster", "factoextra", "fpc", "pheatmap"] }, "drcte": { "name": "drcte", "version": "1.0.30", "sha256": "0gpzpmk5v1lr03gl710kp4d4ldfskjr5s66wcl00abg3kz8jpixn", - "depends": ["dplyr", "drc", "lmtest", "MASS", "mclust", "multcomp", "nor1mix", "plyr", "sandwich", "survival", "tidyr"] + "depends": ["MASS", "dplyr", "drc", "lmtest", "mclust", "multcomp", "nor1mix", "plyr", "sandwich", "survival", "tidyr"] }, "drda": { "name": "drda", @@ -56015,13 +56621,19 @@ "name": "drf", "version": "1.1.0", "sha256": "13b31rynknzirnvgygs1ar5968xdh8dhg60ibn0g359gnzadn7ad", - "depends": ["fastDummies", "Matrix", "Rcpp", "RcppEigen", "transport"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "fastDummies", "transport"] }, "drgee": { "name": "drgee", "version": "1.1.10", "sha256": "0hy7887mvlxh73zk2yzp46bqakq924n940j21lw25jgygmzz1176", - "depends": ["data_table", "nleqslv", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "nleqslv", "survival"] + }, + "drglm": { + "name": "drglm", + "version": "1.1", + "sha256": "1v3n546ivvh5hfwlz7m1wn6jdgcd9yjnricah1y7v6r15zy3jyds", + "depends": ["nnet", "speedglm"] }, "drhur": { "name": "drhur", @@ -56039,13 +56651,13 @@ "name": "drimmR", "version": "1.0.1", "sha256": "0fi0ifb9y2jfb347684fd9pjfgn4b693yb5sqbcfpf2z7jvknsi1", - "depends": ["doParallel", "dplyr", "foreach", "future", "ggplot2", "Rdpack", "reshape2", "seqinr", "tidyverse"] + "depends": ["Rdpack", "doParallel", "dplyr", "foreach", "future", "ggplot2", "reshape2", "seqinr", "tidyverse"] }, "driveR": { "name": "driveR", "version": "0.4.1", "sha256": "00cwzy097wbl1k3sw3nfn0kzb6af7hyzwaznvlckf77g7kw86bmi", - "depends": ["caret", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "org_Hs_eg_db", "randomForest", "rlang", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene"] + "depends": ["GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "S4Vectors", "TxDb_Hsapiens_UCSC_hg19_knownGene", "TxDb_Hsapiens_UCSC_hg38_knownGene", "caret", "org_Hs_eg_db", "randomForest", "rlang"] }, "droll": { "name": "droll", @@ -56053,11 +56665,17 @@ "sha256": "0gd1vnvkjdsw7gz4czi4g9zq5080awfr4dy2srgksh4ah4ki4vm3", "depends": ["Ryacas"] }, + "dropR": { + "name": "dropR", + "version": "1.0.3", + "sha256": "159kw9wxglc7rbb5bvvg1ixi0j1y22179wn7g40k9ahpfvfmbqy4", + "depends": ["data_table", "ggplot2", "lifecycle", "shiny", "survival"] + }, "dropout": { "name": "dropout", "version": "2.1.1", "sha256": "11clanskb3w0v1ahx6q8d7nxqfsck4zbcyrkb8db1ykbdakdq1xs", - "depends": ["dplyr", "Rcpp", "tibble"] + "depends": ["Rcpp", "dplyr", "tibble"] }, "droptest": { "name": "droptest", @@ -56069,7 +56687,7 @@ "name": "drord", "version": "1.0.1", "sha256": "0xi85s6y78d54qv3cw7q72dz5kcs8cc8nyjyaxr5h6pfpzi2l8i9", - "depends": ["ggplot2", "MASS", "ordinal", "VGAM"] + "depends": ["MASS", "VGAM", "ggplot2", "ordinal"] }, "drought": { "name": "drought", @@ -56081,25 +56699,25 @@ "name": "drpop", "version": "0.0.3", "sha256": "1gh0w1a59070g9mmck4fp9591vfw23c5nlj3jrkxwarp4vfy1dqp", - "depends": ["dplyr", "gam", "ggplot2", "janitor", "nnet", "nnls", "ranger", "reshape2", "stringr", "SuperLearner", "tidyr"] + "depends": ["SuperLearner", "dplyr", "gam", "ggplot2", "janitor", "nnet", "nnls", "ranger", "reshape2", "stringr", "tidyr"] }, "drtmle": { "name": "drtmle", "version": "1.1.2", "sha256": "0qvdxzvpi7a66gx61v6fj31zy4y5cid18g4qgv5lir7qc74rbbx0", - "depends": ["future_apply", "np", "SuperLearner"] + "depends": ["SuperLearner", "future_apply", "np"] }, "drugDemand": { "name": "drugDemand", "version": "0.1.3", "sha256": "1gmpvcrcs1j2m98dxppa0jss781dpscw89ffh8d6yamm385p0951", - "depends": ["doParallel", "doRNG", "dplyr", "erify", "eventPred", "foreach", "L1pack", "MASS", "mvtnorm", "nlme", "plotly", "purrr", "Rcpp", "rlang", "stringr", "survival"] + "depends": ["L1pack", "MASS", "Rcpp", "doParallel", "doRNG", "dplyr", "erify", "eventPred", "foreach", "mvtnorm", "nlme", "plotly", "purrr", "rlang", "stringr", "survival"] }, "drugdevelopR": { "name": "drugdevelopR", "version": "1.0.1", "sha256": "0mbr0s826wmknw4n50qbg5i9b5x969s9h7w21nni17i074iqjhpb", - "depends": ["cubature", "doParallel", "foreach", "iterators", "MASS", "msm", "mvtnorm", "progressr"] + "depends": ["MASS", "cubature", "doParallel", "foreach", "iterators", "msm", "mvtnorm", "progressr"] }, "drugprepr": { "name": "drugprepr", @@ -56129,7 +56747,7 @@ "name": "dsa", "version": "1.0.12", "sha256": "16lqqm0lcgpkzkj7d0akamzap85aj4dyj5rs5fkb5b9bjqa5r4c5", - "depends": ["dygraphs", "forecast", "ggplot2", "gridExtra", "htmlwidgets", "R2HTML", "reshape2", "rJava", "seastests", "timeDate", "tsoutliers", "xts", "zoo"] + "depends": ["R2HTML", "dygraphs", "forecast", "ggplot2", "gridExtra", "htmlwidgets", "rJava", "reshape2", "seastests", "timeDate", "tsoutliers", "xts", "zoo"] }, "dsample": { "name": "dsample", @@ -56147,7 +56765,7 @@ "name": "dscore", "version": "1.9.0", "sha256": "1skcmd2fh8s5d5qdj661niwa3cfd01i22kxxcf84awad0p1p8g57", - "depends": ["dplyr", "Rcpp", "RcppArmadillo", "stringi", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "stringi", "tidyr"] }, "dsdp": { "name": "dsdp", @@ -56157,9 +56775,9 @@ }, "dsem": { "name": "dsem", - "version": "1.2.1", - "sha256": "08k4h81zm3clzxr0lff7kxbfgnn66jzh0x5bm1jv9ag08p67392i", - "depends": ["igraph", "Matrix", "RcppEigen", "sem", "TMB"] + "version": "1.3.0", + "sha256": "1zqywsa2ip48vpzbk1xml1glrihgfwf37z25pzs07xzj0ij1lwjy", + "depends": ["Matrix", "RcppEigen", "TMB", "igraph", "sem"] }, "dsims": { "name": "dsims", @@ -56177,7 +56795,7 @@ "name": "dslice", "version": "1.2.2", "sha256": "0h34bnji7ll2zh79d1yilj908mjgf27yify2kl2gapj9k499zc2v", - "depends": ["ggplot2", "Rcpp", "scales"] + "depends": ["Rcpp", "ggplot2", "scales"] }, "dsm": { "name": "dsm", @@ -56199,8 +56817,8 @@ }, "dsmmR": { "name": "dsmmR", - "version": "1.0.2", - "sha256": "05hbwdycbz58mn01xl6958w03z4adjb00bgl1f9sqbhgy4x23397", + "version": "1.0.5", + "sha256": "0pdhpshdhpd1cvgnx3cnbkczwychxv49w90sc4lvgviknl7wd4c1", "depends": ["DiscreteWeibull"] }, "dsos": { @@ -56225,7 +56843,7 @@ "name": "dst", "version": "1.7.0", "sha256": "1l3bc2pn092wawf11dmjyv67c280c4p9j3maillc10mpaxav5k99", - "depends": ["dplyr", "ggplot2", "Matrix", "rlang", "tidyr"] + "depends": ["Matrix", "dplyr", "ggplot2", "rlang", "tidyr"] }, "dstabledist": { "name": "dstabledist", @@ -56249,7 +56867,7 @@ "name": "dtComb", "version": "1.0.2", "sha256": "1ww0lw7j77ww1scd99ddasnxp7icbwbadiv3sl4zm8i1bb2mqmyr", - "depends": ["caret", "epiR", "gam", "ggplot2", "ggpubr", "glmnet", "OptimalCutpoints", "pROC"] + "depends": ["OptimalCutpoints", "caret", "epiR", "gam", "ggplot2", "ggpubr", "glmnet", "pROC"] }, "dtangle": { "name": "dtangle", @@ -56297,7 +56915,7 @@ "name": "dtrackr", "version": "0.4.4", "sha256": "0biwciv8f8rd6psydiriyylklw7q954dsr3rrax5a2fc3gn9adbz", - "depends": ["base64enc", "dplyr", "fs", "glue", "htmltools", "magrittr", "pdftools", "png", "purrr", "rlang", "rsvg", "stringr", "tibble", "tidyr", "V8"] + "depends": ["V8", "base64enc", "dplyr", "fs", "glue", "htmltools", "magrittr", "pdftools", "png", "purrr", "rlang", "rsvg", "stringr", "tibble", "tidyr"] }, "dtt": { "name": "dtt", @@ -56313,9 +56931,9 @@ }, "dtts": { "name": "dtts", - "version": "0.1.2", - "sha256": "1qlk2rk43nwgr2z1dkv6fi0llq0wvzb59a5m5n79fqnf7hv2fp8k", - "depends": ["bit64", "data_table", "nanotime", "Rcpp", "RcppCCTZ", "RcppDate"] + "version": "0.1.3", + "sha256": "0n13q14a4vhfx6jvjg4zbch0874agfm8z5mlwzvpvh4vc5rcc4bk", + "depends": ["Rcpp", "RcppCCTZ", "RcppDate", "bit64", "data_table", "nanotime"] }, "dtw": { "name": "dtw", @@ -56325,9 +56943,9 @@ }, "dtwclust": { "name": "dtwclust", - "version": "5.5.12", - "sha256": "19dmy9jalwp2vcfkzm58g5wf4nmp3290rrsa51prw8xrjj0hk1g3", - "depends": ["clue", "cluster", "dplyr", "dtw", "flexclust", "foreach", "ggplot2", "ggrepel", "Matrix", "proxy", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppThread", "reshape2", "RSpectra", "shiny", "shinyjs"] + "version": "6.0.0", + "sha256": "0by01x4qpf1pin5l61wmm600bmsnlnns9knwb0qmjlj72pmwfkqh", + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppThread", "clue", "cluster", "dplyr", "dtw", "flexclust", "foreach", "ggplot2", "ggrepel", "proxy", "reshape2", "rlang", "shiny", "shinyjs"] }, "dual": { "name": "dual", @@ -56339,7 +56957,7 @@ "name": "dualScale", "version": "1.0.0", "sha256": "0dw8vknkvb9qzmxw2xmwnpa1dlrqhx70j32q6dm5j1sxjyw2zx37", - "depends": ["eba", "ff", "ggplot2", "ggrepel", "glue", "Matrix", "matrixcalc", "RColorBrewer"] + "depends": ["Matrix", "RColorBrewer", "eba", "ff", "ggplot2", "ggrepel", "glue", "matrixcalc"] }, "dualtrees": { "name": "dualtrees", @@ -56361,14 +56979,14 @@ }, "duckdb": { "name": "duckdb", - "version": "1.0.0", - "sha256": "08hcrbfcf76d7dbgngzz48l07ahzkf9vkb236h06mw9k820dlzm5", + "version": "1.0.0-2", + "sha256": "00dzrjwpd94k11gqvdafxkd8pqlwav6l4haim88p8ann48gxad9p", "depends": ["DBI"] }, "duckdbfs": { "name": "duckdbfs", - "version": "0.0.4", - "sha256": "0d23ji2pwg5xmqj584174194yh4sn74skqjmz2s1vzzgpprazclh", + "version": "0.0.5", + "sha256": "1vj3ay4lr0whzvkljha1sk4cqjsngj7k1zykjfmj67drljvy7m64", "depends": ["DBI", "dbplyr", "dplyr", "duckdb", "fs", "glue"] }, "duckduckr": { @@ -56379,9 +56997,9 @@ }, "duckplyr": { "name": "duckplyr", - "version": "0.4.0", - "sha256": "00fdpf9kgzcic0wf43xzh56mdscf0vds91s1anayqjaq9b8g58dn", - "depends": ["cli", "collections", "DBI", "dplyr", "duckdb", "glue", "jsonlite", "lifecycle", "rlang", "tibble", "tidyselect", "vctrs"] + "version": "0.4.1", + "sha256": "1lrg5prs6gy1iv6i5n970miafvz1jqnv6bzvw2lciszrj5d2a8ry", + "depends": ["DBI", "cli", "collections", "dplyr", "duckdb", "glue", "jsonlite", "lifecycle", "rlang", "tibble", "tidyselect", "vctrs"] }, "duke": { "name": "duke", @@ -56423,7 +57041,7 @@ "name": "dupNodes", "version": "0.3.0", "sha256": "1697pcr27lix8vf1krq6vdby8dk53h0s14gcng1y5rdngrxav9nk", - "depends": ["igraph", "Rdpack"] + "depends": ["Rdpack", "igraph"] }, "dupiR": { "name": "dupiR", @@ -56447,7 +57065,7 @@ "name": "dvmisc", "version": "1.1.4", "sha256": "01v6sixx0f3nrn6ymfifb3pvd2msfrwm21kmdv38laxq29vc4rsi", - "depends": ["cubature", "data_table", "dplyr", "ggplot2", "MASS", "mvtnorm", "pracma", "rbenchmark", "Rcpp", "survey", "tab"] + "depends": ["MASS", "Rcpp", "cubature", "data_table", "dplyr", "ggplot2", "mvtnorm", "pracma", "rbenchmark", "survey", "tab"] }, "dvqcc": { "name": "dvqcc", @@ -56477,7 +57095,7 @@ "name": "dwp", "version": "1.1", "sha256": "1a70lxw4ck3pbklyibn8x6qpgj16zvawi76qqc9rnc26q2n5zp6j", - "depends": ["boot", "expint", "GenEst", "gtools", "invgamma", "magrittr", "MASS", "matrixStats", "mvtnorm", "numDeriv", "plotrix", "pracma", "sf", "statmod", "VGAM"] + "depends": ["GenEst", "MASS", "VGAM", "boot", "expint", "gtools", "invgamma", "magrittr", "matrixStats", "mvtnorm", "numDeriv", "plotrix", "pracma", "sf", "statmod"] }, "dySEM": { "name": "dySEM", @@ -56489,7 +57107,7 @@ "name": "dyads", "version": "1.2.1", "sha256": "0nx4gx51p0qz1565yn7xg0ijrkqvn9ql9hrmp5lwl4lxvsjnwki1", - "depends": ["CholWishart", "MASS", "mvtnorm", "RcppZiggurat", "Rfast"] + "depends": ["CholWishart", "MASS", "RcppZiggurat", "Rfast", "mvtnorm"] }, "dydea": { "name": "dydea", @@ -56507,7 +57125,7 @@ "name": "dymo", "version": "1.1.0", "sha256": "0s1gpi5qiafkf91awyx52qw15qs7m18bql51jibgh1lqnqgv1757", - "depends": ["fANCOVA", "ggplot2", "greybox", "imputeTS", "lubridate", "MASS", "matlib", "modeest", "moments", "narray", "purrr", "readr", "scales", "tictoc"] + "depends": ["MASS", "fANCOVA", "ggplot2", "greybox", "imputeTS", "lubridate", "matlib", "modeest", "moments", "narray", "purrr", "readr", "scales", "tictoc"] }, "dyn": { "name": "dyn", @@ -56519,7 +57137,7 @@ "name": "dyn.log", "version": "0.4.0", "sha256": "0vlzv6zy29qhygm77kww65wpnp77a93ja13vr4p2yyychrjspqx3", - "depends": ["crayon", "glue", "R6", "rlang", "stringr", "yaml"] + "depends": ["R6", "crayon", "glue", "rlang", "stringr", "yaml"] }, "dynBiplotGUI": { "name": "dynBiplotGUI", @@ -56531,7 +57149,7 @@ "name": "dynConfiR", "version": "0.0.4", "sha256": "1ql8c712g7jx0j1aw7qrfsp81abiajigzvwwlq6v96ar5ag5jrgy", - "depends": ["dplyr", "magrittr", "minqa", "progress", "Rcpp", "rlang"] + "depends": ["Rcpp", "dplyr", "magrittr", "minqa", "progress", "rlang"] }, "dynCorr": { "name": "dynCorr", @@ -56543,13 +57161,13 @@ "name": "dynRB", "version": "0.18", "sha256": "0sz0a1g6z48f0s7ch86y9mvazwk4gdswjj179a13d0yjhy9rgpk0", - "depends": ["corrplot", "dplyr", "foreign", "ggplot2", "RColorBrewer", "reshape2", "vegan"] + "depends": ["RColorBrewer", "corrplot", "dplyr", "foreign", "ggplot2", "reshape2", "vegan"] }, "dynaSpec": { "name": "dynaSpec", "version": "1.0.1", "sha256": "0wzfy50602wlsh4sbfjadsr01f3az2lvk5c4px3qmcvv5gybd6w0", - "depends": ["ari", "av", "gganimate", "ggplot2", "magrittr", "NatureSounds", "pbapply", "png", "scales", "seewave", "tuneR", "viridis"] + "depends": ["NatureSounds", "ari", "av", "gganimate", "ggplot2", "magrittr", "pbapply", "png", "scales", "seewave", "tuneR", "viridis"] }, "dynaTree": { "name": "dynaTree", @@ -56567,7 +57185,7 @@ "name": "dynamac", "version": "0.1.12", "sha256": "0gggzhidn5z4g7pzqx1bg56prnh9krph65k3yj677qrff12abbx9", - "depends": ["lmtest", "MASS"] + "depends": ["MASS", "lmtest"] }, "dynamic": { "name": "dynamic", @@ -56577,8 +57195,8 @@ }, "dynamicSDM": { "name": "dynamicSDM", - "version": "1.3.3", - "sha256": "08kv5bp8yqlrxxlr4fz4zzzcgh3sc6y9dg934gh97p5vxmwjravq", + "version": "1.3.4", + "sha256": "0126yj2qafg93jipkbszlwjcy20yxnd4adn8r5b7cwf5ipkp92mc", "depends": ["dplyr", "googledrive", "lubridate", "magrittr", "readr", "reticulate", "rgee", "sf", "terra", "tidyr"] }, "dynamicTreeCut": { @@ -56603,7 +57221,7 @@ "name": "dynatopGIS", "version": "0.2.5", "sha256": "1sv519dc7fs6zrwnyggkzrcy866a6pgag0shk6rr6cd3xa1blwpv", - "depends": ["jsonlite", "R6", "terra"] + "depends": ["R6", "jsonlite", "terra"] }, "dyncomp": { "name": "dyncomp", @@ -56627,7 +57245,7 @@ "name": "dyngen", "version": "1.0.5", "sha256": "095jqn1rd83qm3ayca9hmv6bhlaa2c338020l46vniq8n38kbnra", - "depends": ["assertthat", "dplyr", "dynutils", "ggplot2", "ggraph", "ggrepel", "GillespieSSA2", "igraph", "lmds", "Matrix", "patchwork", "pbapply", "purrr", "rlang", "tibble", "tidygraph", "tidyr", "viridis"] + "depends": ["GillespieSSA2", "Matrix", "assertthat", "dplyr", "dynutils", "ggplot2", "ggraph", "ggrepel", "igraph", "lmds", "patchwork", "pbapply", "purrr", "rlang", "tibble", "tidygraph", "tidyr", "viridis"] }, "dynlm": { "name": "dynlm", @@ -56669,18 +57287,18 @@ "name": "dynr", "version": "0.1.16-105", "sha256": "0s9n62k9cghvqgcpgingcvni3fzq2d9lrnj48i92kb25165446wm", - "depends": ["car", "deSolve", "fda", "ggplot2", "latex2exp", "magrittr", "MASS", "Matrix", "mice", "numDeriv", "plyr", "Rdpack", "reshape2", "stringi", "tibble", "xtable"] + "depends": ["MASS", "Matrix", "Rdpack", "car", "deSolve", "fda", "ggplot2", "latex2exp", "magrittr", "mice", "numDeriv", "plyr", "reshape2", "stringi", "tibble", "xtable"] }, "dynsim": { "name": "dynsim", "version": "1.2.3", "sha256": "1fk23cp2hvkn7msxrdc9cnm4pmcmhcdf3q6rwm507bniigrswnx4", - "depends": ["ggplot2", "gridExtra", "MASS"] + "depends": ["MASS", "ggplot2", "gridExtra"] }, "dynsurv": { "name": "dynsurv", - "version": "0.4-6", - "sha256": "0nxksy8q1r82qak77sb99kpwhq011d4jh4iicc7c0iin04r5nym4", + "version": "0.4-7", + "sha256": "0rp51kr6rsfqdcl4gswqz56ppnxa81ak023x3gdxsdf4p9jjhdcy", "depends": ["BH", "data_table", "ggplot2", "nleqslv", "splines2", "survival"] }, "dyntaper": { @@ -56693,13 +57311,13 @@ "name": "dynutils", "version": "1.0.11", "sha256": "06an2bm1d131v28m240vii2wisbz3zs32wbamm2w7r8rl3yrxkh9", - "depends": ["assertthat", "crayon", "desc", "dplyr", "magrittr", "Matrix", "proxyC", "purrr", "Rcpp", "remotes", "stringr", "tibble"] + "depends": ["Matrix", "Rcpp", "assertthat", "crayon", "desc", "dplyr", "magrittr", "proxyC", "purrr", "remotes", "stringr", "tibble"] }, "dynwrap": { "name": "dynwrap", "version": "1.2.4", "sha256": "1jls01flvr91vyipilaqv2n3irniq678bm6f1jlxr2apr7w0rlyx", - "depends": ["assertthat", "babelwhale", "crayon", "dplyr", "dynparam", "dynutils", "glue", "igraph", "magrittr", "Matrix", "processx", "purrr", "readr", "reshape2", "stringr", "tibble", "tidyr", "yaml"] + "depends": ["Matrix", "assertthat", "babelwhale", "crayon", "dplyr", "dynparam", "dynutils", "glue", "igraph", "magrittr", "processx", "purrr", "readr", "reshape2", "stringr", "tibble", "tidyr", "yaml"] }, "e1071": { "name": "e1071", @@ -56711,13 +57329,13 @@ "name": "eAnalytics", "version": "0.3", "sha256": "0kh2mnn4piy30ya0z9hrk10x14pz4li5l0gs8c2by9vkq54cq53i", - "depends": ["dplyr", "DT", "energyr", "googleVis", "leaflet", "plotly", "shiny", "shinydashboard", "shinyWidgets"] + "depends": ["DT", "dplyr", "energyr", "googleVis", "leaflet", "plotly", "shiny", "shinyWidgets", "shinydashboard"] }, "eBsc": { "name": "eBsc", "version": "4.17", "sha256": "18k622687qvp6q8m2ycn9ppwvv2jh76dj92vfkl0b99jng2hv1zl", - "depends": ["Brobdingnag", "MASS", "Matrix", "mvtnorm", "nlme", "Rcpp", "RcppArmadillo"] + "depends": ["Brobdingnag", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "mvtnorm", "nlme"] }, "eCAR": { "name": "eCAR", @@ -56741,7 +57359,7 @@ "name": "eDITH", "version": "1.0.0", "sha256": "0bsy0mpacwjglyp7vfqz32lpyd43yj346yvxqrf32fhwqlpfwimc", - "depends": ["BayesianTools", "DHARMa", "fields", "LaplacesDemon", "OCNet", "Rcpp", "rivnet", "terra"] + "depends": ["BayesianTools", "DHARMa", "LaplacesDemon", "OCNet", "Rcpp", "fields", "rivnet", "terra"] }, "eDMA": { "name": "eDMA", @@ -56777,7 +57395,7 @@ "name": "eLNNpairedCov", "version": "0.3.2", "sha256": "1rr8zd8l71am7sx8glv73lvn0w1wyyzkgn0j7hybi7ibcwg4hz5l", - "depends": ["Biobase", "limma", "MASS"] + "depends": ["Biobase", "MASS", "limma"] }, "eList": { "name": "eList", @@ -56789,7 +57407,7 @@ "name": "eNchange", "version": "1.0", "sha256": "07vdi05fr6mynb86haas21izdcjiagw14p1h8n0qr1hb3klvs8n5", - "depends": ["ACDm", "doParallel", "foreach", "hawkes", "iterators", "Rcpp"] + "depends": ["ACDm", "Rcpp", "doParallel", "foreach", "hawkes", "iterators"] }, "ePCR": { "name": "ePCR", @@ -56807,13 +57425,13 @@ "name": "eRm", "version": "1.0-6", "sha256": "059xny2jl81is1qyxgpbf4qi5zqpvdc64322kjz1i011kq9apwmw", - "depends": ["colorspace", "lattice", "MASS", "Matrix", "psych"] + "depends": ["MASS", "Matrix", "colorspace", "lattice", "psych"] }, "eSDM": { "name": "eSDM", - "version": "0.4.1", - "sha256": "0xlqgsk6anpan996q9lxh8c3i6n6vg070g9z9j3z66mh6riyn9rq", - "depends": ["dplyr", "magrittr", "purrr", "rlang", "ROCR", "sf", "shiny", "units"] + "version": "0.4.2", + "sha256": "14h353kw32lb3ik8fqqsb7bb1sxf445js8mw07almq9hpl3srcbn", + "depends": ["ROCR", "dplyr", "magrittr", "purrr", "rlang", "sf", "shiny", "units"] }, "eSIR": { "name": "eSIR", @@ -56831,13 +57449,13 @@ "name": "eaf", "version": "2.5", "sha256": "0krvl6gk44yy9r30sck7mn0k37mi8j7nw90b56klww1zqh0ihs8p", - "depends": ["matrixStats", "modeltools", "Rdpack"] + "depends": ["Rdpack", "matrixStats", "modeltools"] }, "earlyR": { "name": "earlyR", "version": "0.0.5", "sha256": "0978vv48sj1hs61rdb3xv02s8qz03jcm1c8q1mbb3d033x1q7k22", - "depends": ["distcrete", "EpiEstim", "epitrix", "ggplot2"] + "depends": ["EpiEstim", "distcrete", "epitrix", "ggplot2"] }, "earlygating": { "name": "earlygating", @@ -56849,7 +57467,7 @@ "name": "earlywarnings", "version": "1.1.29", "sha256": "1xa9rijqqxa5l253dg8dn1jjhdakf8krl5rflq5v9gybfyrq1885", - "depends": ["fields", "ggplot2", "Kendall", "KernSmooth", "knitr", "lmtest", "moments", "nortest", "quadprog", "som", "spam", "tgp", "tseries"] + "depends": ["Kendall", "KernSmooth", "fields", "ggplot2", "knitr", "lmtest", "moments", "nortest", "quadprog", "som", "spam", "tgp", "tseries"] }, "earth": { "name": "earth", @@ -56865,8 +57483,8 @@ }, "earthtide": { "name": "earthtide", - "version": "0.1.2", - "sha256": "02l84019zpnpdb3j94dx6hq8c2is1819skmfrwa5vg9dvwzbqii4", + "version": "0.1.5", + "sha256": "1skcn33357vnqq4f485cf7w865jsr7bj0kwsl2b78y069qxp7dvr", "depends": ["R6", "Rcpp", "RcppEigen", "RcppThread"] }, "earthtones": { @@ -56879,7 +57497,7 @@ "name": "easy.utils", "version": "0.0.4", "sha256": "1rhdpqnhr1nv5jm3dcs8ikn35d911pi46sfsflk4f73m9fzyj9s1", - "depends": ["dplyr", "fastmatch", "Polychrome", "rlang", "scales"] + "depends": ["Polychrome", "dplyr", "fastmatch", "rlang", "scales"] }, "easyAHP": { "name": "easyAHP", @@ -56897,13 +57515,13 @@ "name": "easyDes", "version": "6.0", "sha256": "12p7ls0q9srrz5h0f0996mmw33shrfbya481s0d5d509vbw8ik6d", - "depends": ["multcomp", "PMCMRplus"] + "depends": ["PMCMRplus", "multcomp"] }, "easyDifferentialGeneCoexpression": { "name": "easyDifferentialGeneCoexpression", "version": "1.4", "sha256": "1isln1bbav2zxqbia8616f1ywnpywcx3772bxws5hphx64x6bqfh", - "depends": ["annotate", "Biobase", "diffcoexp", "geneExpressionFromGEO", "GEOquery", "jetset", "limma", "magrittr", "xml2"] + "depends": ["Biobase", "GEOquery", "annotate", "diffcoexp", "geneExpressionFromGEO", "jetset", "limma", "magrittr", "xml2"] }, "easyNCDF": { "name": "easyNCDF", @@ -56911,11 +57529,17 @@ "sha256": "0kh38iafgwf9rxd8ccwv2pvzxsnk5pwp02nqnksgy7l8s526i5cc", "depends": ["abind", "ncdf4"] }, + "easyORtables": { + "name": "easyORtables", + "version": "0.0.1", + "sha256": "1k9g4gfc8s6c93ba2clb4vyaafs7wbxw34d8nrkbnkzxy2frmkwn", + "depends": ["MASS", "kableExtra", "knitr"] + }, "easyPSID": { "name": "easyPSID", "version": "0.1.2", "sha256": "0npih5xpf2a5xw2iz68z9ckm8d4cpradzzdn50rdpg4gqvaq7azp", - "depends": ["foreign", "LaF", "stringr"] + "depends": ["LaF", "foreign", "stringr"] }, "easyPubMed": { "name": "easyPubMed", @@ -56933,19 +57557,19 @@ "name": "easySdcTable", "version": "1.0.7", "sha256": "0wvnyhjq94cqjx9dw2nc5v66a11qbi972g0shvzz7q4llkgm21if", - "depends": ["Matrix", "sdcTable", "shiny", "SSBtools"] + "depends": ["Matrix", "SSBtools", "sdcTable", "shiny"] }, "easyVerification": { "name": "easyVerification", "version": "0.4.5", "sha256": "1k62dfhnc0g07jf82gm1m3747z8zchmj4mi5qap4dgc7pxdp2ikc", - "depends": ["pbapply", "Rcpp", "SpecsVerification"] + "depends": ["Rcpp", "SpecsVerification", "pbapply"] }, "easyalluvial": { "name": "easyalluvial", "version": "0.3.2", "sha256": "1jn65b4rfzw3hn6n1bmdaqfv2fb7wq0b8rgbflj230k79kravsxm", - "depends": ["dplyr", "forcats", "ggalluvial", "ggplot2", "ggridges", "gridExtra", "magrittr", "progress", "progressr", "purrr", "randomForest", "RColorBrewer", "recipes", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "forcats", "ggalluvial", "ggplot2", "ggridges", "gridExtra", "magrittr", "progress", "progressr", "purrr", "randomForest", "recipes", "rlang", "stringr", "tibble", "tidyr"] }, "easyanova": { "name": "easyanova", @@ -56957,7 +57581,7 @@ "name": "easybgm", "version": "0.1.2", "sha256": "10z8p9bslpnz3cp7lq7qadrpj6jm8k7rwakvak73qppvmpza7rfr", - "depends": ["BDgraph", "BGGM", "bgms", "dplyr", "ggplot2", "HDInterval", "igraph", "qgraph"] + "depends": ["BDgraph", "BGGM", "HDInterval", "bgms", "dplyr", "ggplot2", "igraph", "qgraph"] }, "easycensus": { "name": "easycensus", @@ -56969,7 +57593,7 @@ "name": "easyclimate", "version": "0.2.1", "sha256": "19gfajf4bhlz0mpq70xjy87xc3qi9kqs3869zm2jy4x0i3cingk6", - "depends": ["R_utils", "RCurl", "terra"] + "depends": ["RCurl", "R_utils", "terra"] }, "easycsv": { "name": "easycsv", @@ -56981,13 +57605,13 @@ "name": "easydb", "version": "1.1.0", "sha256": "1xmhg5320ilc1138x23sb8s2wr7d753h0dv9i1az3zicx0858zbd", - "depends": ["askpass", "assertthat", "cli", "DBI", "keyring", "rlang", "yaml"] + "depends": ["DBI", "askpass", "assertthat", "cli", "keyring", "rlang", "yaml"] }, "easylabel": { "name": "easylabel", "version": "0.2.8", "sha256": "0rl17iccmczd380yzcdkw6943x8pxyb4sqg6q6jj5jqqzalvqshb", - "depends": ["DT", "ggplot2", "gtools", "plotly", "RColorBrewer", "rlang", "shiny", "shinybusy", "shinycssloaders"] + "depends": ["DT", "RColorBrewer", "ggplot2", "gtools", "plotly", "rlang", "shiny", "shinybusy", "shinycssloaders"] }, "easynls": { "name": "easynls", @@ -57011,7 +57635,7 @@ "name": "easyr", "version": "0.5-11", "sha256": "1wzc21n2f7i7idd2hs5s0sh46gpgl6sf4wmrmhi0wc6jcc4sb5rk", - "depends": ["data_table", "digest", "dplyr", "foreign", "glue", "Hmisc", "lubridate", "readxl", "rlang", "rprojroot", "stringr", "XML"] + "depends": ["Hmisc", "XML", "data_table", "digest", "dplyr", "foreign", "glue", "lubridate", "readxl", "rlang", "rprojroot", "stringr"] }, "easyreg": { "name": "easyreg", @@ -57021,21 +57645,27 @@ }, "easystats": { "name": "easystats", - "version": "0.7.2", - "sha256": "0rfqzi5s0xxz30nii2ahr4hrymmkcx4spla7sdklkidvvrsrmsvc", + "version": "0.7.3", + "sha256": "1mxkqm977wgnqd54paifyy5drl7zyb39lm2icps6vls4702zjzis", "depends": ["bayestestR", "correlation", "datawizard", "effectsize", "insight", "modelbased", "parameters", "performance", "report", "see"] }, + "easysurv": { + "name": "easysurv", + "version": "2.0.1", + "sha256": "065h9wkd930k81jwdj48955nkv2z2q1xky15rg5nh0ig1r10d37p", + "depends": ["bshazard", "censored", "cli", "data_table", "dplyr", "flexsurv", "flexsurvcure", "ggplot2", "ggsurvfit", "openxlsx", "parsnip", "plotly", "purrr", "rlang", "scales", "survival", "tibble", "tidyr", "usethis"] + }, "eat": { "name": "eat", "version": "0.1.4", "sha256": "1s286b6wx0d59n2v3hf6s1zy1f15mwf6ssrpwciard3giccnf556", - "depends": ["conflicted", "dplyr", "ggparty", "ggplot2", "ggrepel", "lpSolveAPI", "partykit", "Rdpack", "reshape2"] + "depends": ["Rdpack", "conflicted", "dplyr", "ggparty", "ggplot2", "ggrepel", "lpSolveAPI", "partykit", "reshape2"] }, "eatATA": { "name": "eatATA", "version": "1.1.2", "sha256": "0ak9722mgy9fgpk43wppgisfxj6v4fzc8qwk4cmd760sq5gw3j88", - "depends": ["lpSolve", "mathjaxr", "Matrix", "Rglpk"] + "depends": ["Matrix", "Rglpk", "lpSolve", "mathjaxr"] }, "eatDB": { "name": "eatDB", @@ -57053,7 +57683,7 @@ "name": "eatRep", "version": "0.14.7", "sha256": "11yz0g83ngzab8gqi2mq4s28j7yvl06jf4clwb8vfjqa7lwpfcgq", - "depends": ["BIFIEsurvey", "boot", "car", "combinat", "eatGADS", "eatTools", "EffectLiteR", "estimatr", "fmsb", "Hmisc", "janitor", "lavaan", "lme4", "mice", "miceadds", "msm", "plyr", "progress", "reshape2", "survey", "tidyr"] + "depends": ["BIFIEsurvey", "EffectLiteR", "Hmisc", "boot", "car", "combinat", "eatGADS", "eatTools", "estimatr", "fmsb", "janitor", "lavaan", "lme4", "mice", "miceadds", "msm", "plyr", "progress", "reshape2", "survey", "tidyr"] }, "eatTools": { "name": "eatTools", @@ -57101,7 +57731,7 @@ "name": "ebirdst", "version": "3.2022.3", "sha256": "0d2qblxdm3sk6rsl155ik303pcphw2dp6li4chizc8anpxwf175r", - "depends": ["arrow", "dplyr", "jsonlite", "magrittr", "RColorBrewer", "rlang", "sf", "stringr", "terra", "viridisLite"] + "depends": ["RColorBrewer", "arrow", "dplyr", "jsonlite", "magrittr", "rlang", "sf", "stringr", "terra", "viridisLite"] }, "ebmc": { "name": "ebmc", @@ -57113,7 +57743,7 @@ "name": "ebmstate", "version": "0.1.4", "sha256": "1jbkzf7zn844jg10cy9kv3v569n82718iqaz7id4jfbcq31p7l8v", - "depends": ["HDInterval", "mstate", "Rcpp", "survival"] + "depends": ["HDInterval", "Rcpp", "mstate", "survival"] }, "ebnm": { "name": "ebnm", @@ -57125,13 +57755,13 @@ "name": "ebreg", "version": "0.1.3", "sha256": "1xrs9afjd5hkdmhglj3md5i5hm7awlcdlccz3y2lw4c73lx31ywz", - "depends": ["lars", "Rdpack"] + "depends": ["Rdpack", "lars"] }, "ebvcube": { "name": "ebvcube", - "version": "0.2.1", - "sha256": "1dx75sf60ifg1cld7n65imzs0lm2w4f5613qzrr76pf5zfpxq61p", - "depends": ["checkmate", "curl", "DelayedArray", "ggplot2", "HDF5Array", "httr", "jsonlite", "memuse", "ncdf4", "ncmeta", "reshape2", "rhdf5", "stringr", "terra", "tidyterra", "withr"] + "version": "0.2.3", + "sha256": "0637q8795n7k2mnwdvnamnkdrz4akh458ijry7x3068kfzgr778y", + "depends": ["DelayedArray", "HDF5Array", "checkmate", "curl", "ggplot2", "httr", "jsonlite", "memuse", "ncdf4", "ncmeta", "reshape2", "rhdf5", "stringr", "terra", "tidyterra", "withr"] }, "ec50estimator": { "name": "ec50estimator", @@ -57143,7 +57773,7 @@ "name": "ecan", "version": "0.2.1", "sha256": "12bkgmbm6mbqcjhmanlg7zk0nlgqf8m1b4m7f2wcxsl8nbks8ymd", - "depends": ["cluster", "dendextend", "dplyr", "ggplot2", "jsonlite", "labdsv", "magrittr", "MASS", "purrr", "rlang", "stringr", "tibble", "tidyr", "vegan"] + "depends": ["MASS", "cluster", "dendextend", "dplyr", "ggplot2", "jsonlite", "labdsv", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "vegan"] }, "ecb": { "name": "ecb", @@ -57153,8 +57783,8 @@ }, "ecce": { "name": "ecce", - "version": "3.0.1", - "sha256": "09zyrjld16byc8fs76b46hh6p2saybq00y28gfmflhzb5fhc34a2", + "version": "3.0.2", + "sha256": "1rxvcix414w9hmv9snmndq1ivg27njvvqh9zk7xjxlnf0d8ffc81", "depends": ["curl", "digest", "httr", "jsonlite", "uuid"] }, "ecdfHT": { @@ -57215,7 +57845,7 @@ "name": "echoice2", "version": "0.2.4", "sha256": "0dsyr2fk94nvcd1749amk8mvvli5aalapb2mlhr25mj6d2iyrc30", - "depends": ["dplyr", "forcats", "ggplot2", "magrittr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "forcats", "ggplot2", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "echor": { "name": "echor", @@ -57239,7 +57869,7 @@ "name": "eclust", "version": "0.1.0", "sha256": "01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428", - "depends": ["caret", "data_table", "dynamicTreeCut", "magrittr", "pacman", "pander", "stringr", "WGCNA"] + "depends": ["WGCNA", "caret", "data_table", "dynamicTreeCut", "magrittr", "pacman", "pander", "stringr"] }, "ecm": { "name": "ecm", @@ -57251,13 +57881,13 @@ "name": "ecmwfr", "version": "1.5.0", "sha256": "0bicldir8cmfd25wzmqhcawv94q2xmqwbzsqbk08w9y8x6yhxhic", - "depends": ["curl", "getPass", "httr", "keyring", "memoise", "R6", "uuid"] + "depends": ["R6", "curl", "getPass", "httr", "keyring", "memoise", "uuid"] }, "ecoCopula": { "name": "ecoCopula", "version": "1.0.2", "sha256": "1j3n9h7rm66r8vmzzhy5mjh36gs1qnsh7rq33ymjpkkfy698gbpm", - "depends": ["betareg", "doParallel", "foreach", "glasso", "glm2", "igraph", "MASS", "mgcv", "mvabund", "ordinal", "plyr", "sna", "tweedie"] + "depends": ["MASS", "betareg", "doParallel", "foreach", "glasso", "glm2", "igraph", "mgcv", "mvabund", "ordinal", "plyr", "sna", "tweedie"] }, "ecocbo": { "name": "ecocbo", @@ -57273,9 +57903,15 @@ }, "ecocomDP": { "name": "ecocomDP", - "version": "1.3.1", - "sha256": "0gvqrcan27hsykwshvs76v5gh79bmlbmsmfhxk0yrpnwh2qrbl03", - "depends": ["data_table", "dplyr", "EML", "emld", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "neonOS", "neonUtilities", "RColorBrewer", "rlang", "rmarkdown", "stringr", "tidyr", "uuid", "xml2"] + "version": "1.3.2", + "sha256": "0l7f4fisk5hsvfpsvnpr3s6pb7x9daq6wklws3damdgljml95c3n", + "depends": ["EML", "RColorBrewer", "data_table", "dplyr", "emld", "geosphere", "ggplot2", "httr", "lubridate", "magrittr", "neonOS", "neonUtilities", "rlang", "rmarkdown", "stringr", "tidyr", "uuid", "xml2"] + }, + "ecode": { + "name": "ecode", + "version": "0.1.0", + "sha256": "138gs67z35nxa9a1y0v327qs0c695dy5la68ld17m9xrsg2rjz85", + "depends": ["cowplot", "ggplot2", "rlang", "stringr"] }, "ecodist": { "name": "ecodist", @@ -57309,21 +57945,21 @@ }, "econet": { "name": "econet", - "version": "1.0.0", - "sha256": "1igcyhn0gzv82rm5ki59ivmr3q9ryrimyfwybnppcpvg38wdpvwj", - "depends": ["bbmle", "doParallel", "dplyr", "foreach", "formula_tools", "igraph", "intergraph", "MASS", "Matrix", "minpack_lm", "plyr", "progressr", "sna", "spatstat_utils"] + "version": "1.0.0.1", + "sha256": "13kvx8ikfljxa21r1rjz3xj7liwllfp73nn57cmlhaqgxgw5wpzx", + "depends": ["MASS", "Matrix", "bbmle", "doParallel", "dplyr", "foreach", "formula_tools", "igraph", "intergraph", "minpack_lm", "plyr", "progressr", "sna", "spatstat_utils"] }, "econetwork": { "name": "econetwork", "version": "0.7.0", "sha256": "1pn7bx3rch09ddllq9sfzm5ynz6a1mgbsy3rq0qyg19xan9xgmi6", - "depends": ["bipartite", "blockmodels", "igraph", "Rcpp", "RcppEigen", "RcppGSL", "rdiversity"] + "depends": ["Rcpp", "RcppEigen", "RcppGSL", "bipartite", "blockmodels", "igraph", "rdiversity"] }, "economiccomplexity": { "name": "economiccomplexity", "version": "1.5.0", "sha256": "1xx4fpf2rjizwhicb6sfrgl5xjfin9b9zi0q4kq47gjp8kzahkg3", - "depends": ["igraph", "Matrix", "Rdpack"] + "depends": ["Matrix", "Rdpack", "igraph"] }, "econullnetr": { "name": "econullnetr", @@ -57339,8 +57975,8 @@ }, "ecoreg": { "name": "ecoreg", - "version": "0.2.4", - "sha256": "09iyzl4d68angcrqifpl62y4y4flhib34g8wgq2xxaggmbhvyzwa", + "version": "0.2.5", + "sha256": "09nfi0l06swa1xgziyqznydrv3irv1irpqpxab0f6pbw4fqj7nh8", "depends": [] }, "ecoregime": { @@ -57359,7 +57995,7 @@ "name": "ecos", "version": "0.1.6", "sha256": "1syqh2ivznz5swify1gc34m1iqgnp10rhk7b8giil7fwdzifalfj", - "depends": ["httr", "jsonlite", "stringr", "XML"] + "depends": ["XML", "httr", "jsonlite", "stringr"] }, "ecosim": { "name": "ecosim", @@ -57375,15 +58011,15 @@ }, "ecospat": { "name": "ecospat", - "version": "4.1.0", - "sha256": "1sxvbzdrdr5dda1ds7i669rkaxngp93dpdzqkip07dv28yvjhp02", - "depends": ["ade4", "adehabitatHR", "adehabitatMA", "biomod2", "classInt", "dismo", "ecodist", "foreach", "gbm", "gtools", "Hmisc", "ks", "matrixStats", "nabor", "poibin", "PresenceAbsence", "terra", "vegan"] + "version": "4.1.1", + "sha256": "097cr6qwf2hqm8v3afabnm7lmmv2awih2kz26vd28jr179af8p65", + "depends": ["Hmisc", "PresenceAbsence", "ade4", "adehabitatHR", "adehabitatMA", "biomod2", "classInt", "dismo", "ecodist", "foreach", "gbm", "gtools", "ks", "matrixStats", "nabor", "poibin", "terra", "vegan"] }, "ecostats": { "name": "ecostats", - "version": "1.1.11", - "sha256": "11h5s196aap64jch1123srbwy3907cvc4vgh0lvn5wkxbszrzypc", - "depends": ["ecoCopula", "GET", "MASS", "mgcv", "mvabund", "mvtnorm"] + "version": "1.2.1", + "sha256": "0zf3kw0kbwg759ixzwxilagx7h1xhdjsfvp8gb86b9m6pnwsiqr7", + "depends": ["GET", "MASS", "ecoCopula", "mgcv", "mvabund", "mvtnorm"] }, "ecostatscale": { "name": "ecostatscale", @@ -57425,13 +58061,13 @@ "name": "ecpc", "version": "3.1.1", "sha256": "0vi9k3p1xicx53rmccmx1ykdidqb22hkwgr7l5hc0bjzsv7h2w38", - "depends": ["checkmate", "CVXR", "gglasso", "glmnet", "JOPS", "Matrix", "mgcv", "multiridge", "mvtnorm", "pracma", "pROC", "quadprog", "survival"] + "depends": ["CVXR", "JOPS", "Matrix", "checkmate", "gglasso", "glmnet", "mgcv", "multiridge", "mvtnorm", "pROC", "pracma", "quadprog", "survival"] }, "ecr": { "name": "ecr", "version": "2.1.1", "sha256": "0abj88libbjimb512mvz7fa4ib7q84hn72digs5p3cd3pbx6zv0v", - "depends": ["BBmisc", "checkmate", "dplyr", "ggplot2", "kableExtra", "knitr", "lazyeval", "parallelMap", "ParamHelpers", "plot3D", "plot3Drgl", "plotly", "Rcpp", "reshape2", "scatterplot3d", "smoof", "viridis"] + "depends": ["BBmisc", "ParamHelpers", "Rcpp", "checkmate", "dplyr", "ggplot2", "kableExtra", "knitr", "lazyeval", "parallelMap", "plot3D", "plot3Drgl", "plotly", "reshape2", "scatterplot3d", "smoof", "viridis"] }, "ectotemp": { "name": "ectotemp", @@ -57471,9 +58107,9 @@ }, "eddington": { "name": "eddington", - "version": "4.1.3", - "sha256": "1i04ldq8p7a8wx3l4ln47q07djhcg60560d1j9xg0ridsdi5qjaf", - "depends": ["R6", "Rcpp", "XML"] + "version": "4.2.0", + "sha256": "0nr9mv6vjd0m0n23p9ydamf23rfb9xhy6h8q27qic327avsa3a7g", + "depends": ["R6", "Rcpp", "xml2"] }, "edeaR": { "name": "edeaR", @@ -57509,7 +58145,7 @@ "name": "edgar", "version": "2.0.7", "sha256": "1lzcs78cncz4ira1nnzyip1ap1iva75kfx8ynqqv79pmj8g4nms3", - "depends": ["httr", "qdapRegex", "R_utils", "stringi", "stringr", "tm", "XML"] + "depends": ["R_utils", "XML", "httr", "qdapRegex", "stringi", "stringr", "tm"] }, "edgarWebR": { "name": "edgarWebR", @@ -57527,7 +58163,7 @@ "name": "edgebundle", "version": "0.4.2", "sha256": "138cdhk3p95vh5siwwp05kir6kkrvqjlgbz97dgi149i6jmq656k", - "depends": ["igraph", "interp", "Rcpp", "reticulate"] + "depends": ["Rcpp", "igraph", "interp", "reticulate"] }, "edgebundleR": { "name": "edgebundleR", @@ -57545,7 +58181,7 @@ "name": "edibble", "version": "1.1.1", "sha256": "1c2ifx4yilrq8ivdhl30cq8wix539wfg9l71m4bdz4isq2gg3hw4", - "depends": ["AlgDesign", "cli", "dae", "dplyr", "lifecycle", "magrittr", "nestr", "pillar", "R6", "rlang", "tibble", "tidyselect", "vctrs"] + "depends": ["AlgDesign", "R6", "cli", "dae", "dplyr", "lifecycle", "magrittr", "nestr", "pillar", "rlang", "tibble", "tidyselect", "vctrs"] }, "ediblecity": { "name": "ediblecity", @@ -57557,19 +58193,19 @@ "name": "edina", "version": "0.1.1", "sha256": "1lpmidyxi54byrsnwwadkh5rr454635xrwa4v2wz8mqr2hngxis3", - "depends": ["ggplot2", "jjb", "Rcpp", "RcppArmadillo", "reshape2", "rgen"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "jjb", "reshape2", "rgen"] }, "editData": { "name": "editData", "version": "0.1.8", "sha256": "170i8p264zj716h58bb6pvgh2lnz1w5vplnrcv8vizppi0n1js6l", - "depends": ["dplyr", "DT", "magrittr", "miniUI", "openxlsx", "rio", "rstudioapi", "shiny", "shinyWidgets", "tibble"] + "depends": ["DT", "dplyr", "magrittr", "miniUI", "openxlsx", "rio", "rstudioapi", "shiny", "shinyWidgets", "tibble"] }, "editbl": { "name": "editbl", "version": "1.0.5", "sha256": "07nf808xlj3vh7nfv5rpx3d6jk7pdsygc31z25gi504mmda1y1hd", - "depends": ["dplyr", "DT", "fontawesome", "shiny", "shinyjs", "tibble", "uuid"] + "depends": ["DT", "dplyr", "fontawesome", "shiny", "shinyjs", "tibble", "uuid"] }, "editrules": { "name": "editrules", @@ -57593,7 +58229,7 @@ "name": "edmcr", "version": "0.2.0", "sha256": "06ms8zyygkgq3divall8paiiw5blqxfgml8iy339zfyiwfxabw5a", - "depends": ["igraph", "lbfgs", "MASS", "Matrix", "nloptr", "sdpt3r", "truncnorm", "vegan"] + "depends": ["MASS", "Matrix", "igraph", "lbfgs", "nloptr", "sdpt3r", "truncnorm", "vegan"] }, "edmdata": { "name": "edmdata", @@ -57647,19 +58283,19 @@ "name": "eemR", "version": "1.0.1", "sha256": "1w3nwlrbxm7z4c3acx991zk5drgs67qys7kgl0qakh5vrdsrxw3v", - "depends": ["assertthat", "dplyr", "pracma", "purrr", "R_matlab", "rlist", "stringr", "viridis"] + "depends": ["R_matlab", "assertthat", "dplyr", "pracma", "purrr", "rlist", "stringr", "viridis"] }, "eemdARIMA": { "name": "eemdARIMA", "version": "0.1.0", "sha256": "0ma9h9vi19qy9a70vpdpik64r3q9hxqqcfiswczxwajncw5nvmv0", - "depends": ["forecast", "Rlibeemd"] + "depends": ["Rlibeemd", "forecast"] }, "eemdTDNN": { "name": "eemdTDNN", "version": "0.1.0", "sha256": "1i2xyc26644pgr45s78g44mzln3km9r5cw22niz3cd6q8ik2iva0", - "depends": ["forecast", "Rlibeemd"] + "depends": ["Rlibeemd", "forecast"] }, "eeptools": { "name": "eeptools", @@ -57677,7 +58313,7 @@ "name": "ef", "version": "1.2.0", "sha256": "1ic26mwjv221yyjj16v9xcdxsg3pl6wsp82iaprihdcndswccvzi", - "depends": ["dplyr", "Matrix", "mgcv", "RcppEigen", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "dplyr", "mgcv"] }, "efdm": { "name": "efdm", @@ -57689,7 +58325,7 @@ "name": "eff2", "version": "1.0.2", "sha256": "19mq2klxyy9xjyz5zmfqjhh2cdbhf5s6ylm36x3cjx6f28f2y1fd", - "depends": ["igraph", "pcalg", "RBGL"] + "depends": ["RBGL", "igraph", "pcalg"] }, "effClust": { "name": "effClust", @@ -57711,8 +58347,8 @@ }, "effectsize": { "name": "effectsize", - "version": "0.8.8", - "sha256": "1dx83xv98iny4pzphrr64fv277k70cgmia1s18bh7fix2h3md45k", + "version": "0.8.9", + "sha256": "12qzz3zl5yn28ybmmryhmi29zwzwrfgqhb6wm7aqg78id463bjz9", "depends": ["bayestestR", "datawizard", "insight", "parameters", "performance"] }, "effectsizescr": { @@ -57743,7 +58379,7 @@ "name": "egcm", "version": "1.0.13", "sha256": "16mzhf7x19v9z600n29q4481dmsjfcn55365zbb9d0wrclc3053l", - "depends": ["ggplot2", "MASS", "pracma", "quantmod", "tseries", "urca", "xts", "zoo"] + "depends": ["MASS", "ggplot2", "pracma", "quantmod", "tseries", "urca", "xts", "zoo"] }, "egg": { "name": "egg", @@ -57755,7 +58391,7 @@ "name": "eggCounts", "version": "2.4", "sha256": "089psh98w8kcy52h8vv3z8n0sigp46far0a0w4wfsyv2ijzc2l2p", - "depends": ["BH", "boot", "coda", "lattice", "numbers", "Rcpp", "RcppEigen", "RcppParallel", "rootSolve", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "boot", "coda", "lattice", "numbers", "rootSolve", "rstan", "rstantools"] }, "eglhmm": { "name": "eglhmm", @@ -57797,7 +58433,7 @@ "name": "ei", "version": "1.3-3", "sha256": "0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11", - "depends": ["cubature", "eiPack", "ellipse", "foreach", "MASS", "mnormt", "msm", "mvtnorm", "plotrix", "sp", "tmvtnorm", "ucminf"] + "depends": ["MASS", "cubature", "eiPack", "ellipse", "foreach", "mnormt", "msm", "mvtnorm", "plotrix", "sp", "tmvtnorm", "ucminf"] }, "ei_Datasets": { "name": "ei.Datasets", @@ -57821,7 +58457,7 @@ "name": "eiPack", "version": "0.2-2", "sha256": "1jb7nxk71cyvrmapzwz4fgjv7ca5m17i22acyhx27krl168ss0r2", - "depends": ["coda", "MASS", "msm"] + "depends": ["MASS", "coda", "msm"] }, "eia": { "name": "eia", @@ -57833,7 +58469,7 @@ "name": "eicm", "version": "1.0.3", "sha256": "0439ngwr8m7inljn8303g2a9v3izw81jz1jqxgbp6xdnvlwwpsyx", - "depends": ["doSNOW", "foreach", "GA", "iterators", "optimParallel", "pso", "snow", "ucminf"] + "depends": ["GA", "doSNOW", "foreach", "iterators", "optimParallel", "pso", "snow", "ucminf"] }, "eider": { "name": "eider", @@ -57855,8 +58491,8 @@ }, "eimpute": { "name": "eimpute", - "version": "0.2.3", - "sha256": "02zsz7hrcfypvpkvjyzfmwxpbr03chj2qcqmxkn3dr3zffwp93fq", + "version": "0.2.4", + "sha256": "1yx2ck74g3229n159z7p453dfdsy6hrjfkgsi4wcnxg3hi214wff", "depends": ["Rcpp", "RcppEigen"] }, "einet": { @@ -57869,7 +58505,7 @@ "name": "einsum", "version": "0.1.2", "sha256": "06q9kmzgxkpvm3krn1w1nfy8h2xrbmxc9cd5b4mm7yx829r2jf09", - "depends": ["glue", "mathjaxr", "Rcpp"] + "depends": ["Rcpp", "glue", "mathjaxr"] }, "eiopaR": { "name": "eiopaR", @@ -57917,7 +58553,7 @@ "name": "elasso", "version": "1.1", "sha256": "0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2", - "depends": ["glmnet", "SiZer"] + "depends": ["SiZer", "glmnet"] }, "elastes": { "name": "elastes", @@ -57929,7 +58565,7 @@ "name": "elastic", "version": "1.2.0", "sha256": "0k98ziacyxl1pyhyynmswcncqwl0a05sawypncdpdd9xr77nvgi6", - "depends": ["crul", "curl", "jsonlite", "R6"] + "depends": ["R6", "crul", "curl", "jsonlite"] }, "elasticnet": { "name": "elasticnet", @@ -57959,7 +58595,7 @@ "name": "elections.dtree", "version": "2.0.0", "sha256": "199ms891xgr8jgb5w0lrp8z1aj8faqrfsx60bcgv152v7y12mjx0", - "depends": ["prefio", "R6", "Rcpp", "RcppThread", "Rdpack", "testthat"] + "depends": ["R6", "Rcpp", "RcppThread", "Rdpack", "prefio", "testthat"] }, "electionsBR": { "name": "electionsBR", @@ -58007,7 +58643,7 @@ "name": "elhmc", "version": "1.1.0", "sha256": "0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5", - "depends": ["emplik", "MASS", "plyr"] + "depends": ["MASS", "emplik", "plyr"] }, "elisr": { "name": "elisr", @@ -58049,7 +58685,7 @@ "name": "ellipticalsymmetry", "version": "0.1.2", "sha256": "035q6zjf0lnx704q5g51bhv1xp7y0yn31ph57zydk92gfpgn468l", - "depends": ["doParallel", "doRNG", "foreach", "ICSNP"] + "depends": ["ICSNP", "doParallel", "doRNG", "foreach"] }, "elmNNRcpp": { "name": "elmNNRcpp", @@ -58061,7 +58697,7 @@ "name": "elo", "version": "3.0.2", "sha256": "1phyg8by1pz3kvrb0x3w1a9f46ccadgzzznr6r8azfbqv46xyknf", - "depends": ["pROC", "Rcpp"] + "depends": ["Rcpp", "pROC"] }, "elrm": { "name": "elrm", @@ -58085,13 +58721,19 @@ "name": "em", "version": "1.0.0", "sha256": "16xmksz1zdr61gxycsbia28kj16nrrcdvjcdd3nk6n6zjiy3ca3v", - "depends": ["dplyr", "magrittr", "mclust", "nnet", "numDeriv", "plm", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "magrittr", "mclust", "nnet", "numDeriv", "plm", "survival"] }, "emBayes": { "name": "emBayes", "version": "0.1.5", "sha256": "1ycr91r0zh75whpf4l9hxrm07rks589bmy994nby88r5yrv34wwg", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] + }, + "emIRT": { + "name": "emIRT", + "version": "0.0.14", + "sha256": "1vdmrad9f0ywrlb3xqwysm8vps5dz9xc3xq6jl82gr6xl3rr54zi", + "depends": ["Rcpp", "RcppArmadillo", "pscl"] }, "emailjsr": { "name": "emailjsr", @@ -58107,8 +58749,8 @@ }, "emayili": { "name": "emayili", - "version": "0.8.0", - "sha256": "0cpg77w8z1j05mqkkji7hqpan8p1kq6l1r07iwpsany0y5di0mlf", + "version": "0.9.1", + "sha256": "04dlya7fki6gq98rws5b3577lrs0cd213ml3w8qcsyzn7bbpz7np", "depends": ["base64enc", "commonmark", "curl", "digest", "dplyr", "glue", "htmltools", "httr", "logger", "magrittr", "mime", "purrr", "rmarkdown", "rvest", "stringi", "stringr", "tidyr", "urltools", "xfun", "xml2"] }, "embed": { @@ -58121,19 +58763,19 @@ "name": "embryogrowth", "version": "9.1", "sha256": "0c7ggpa2i9j17zzknx9h5w6sibk5pdy81484gl6sb5s88wmn16qm", - "depends": ["deSolve", "HelpersMG", "numDeriv", "optimx"] + "depends": ["HelpersMG", "deSolve", "numDeriv", "optimx"] }, "emdbook": { "name": "emdbook", "version": "1.3.13", "sha256": "069w10i1590bcyzv4kfsg7wsr1yl9nlsyj6yvys088xll5z4n116", - "depends": ["bbmle", "coda", "lattice", "MASS", "plyr"] + "depends": ["MASS", "bbmle", "coda", "lattice", "plyr"] }, "emdi": { "name": "emdi", "version": "2.2.2", "sha256": "1zdb2bg8gdpjlg104f5cpnrrdnpdqdcp95gxlbnadq6rds94ipcx", - "depends": ["boot", "formula_tools", "ggplot2", "gridExtra", "HLMdiag", "MASS", "moments", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "rlang", "saeRobust", "spdep", "stringr"] + "depends": ["HLMdiag", "MASS", "boot", "formula_tools", "ggplot2", "gridExtra", "moments", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "rlang", "saeRobust", "spdep", "stringr"] }, "emdist": { "name": "emdist", @@ -58145,7 +58787,7 @@ "name": "emery", "version": "0.5.1", "sha256": "1x0x1f2i0yxkq8xl6vm2w2nb8blpa6dkns07d1n9qj43rnwljv5s", - "depends": ["dplyr", "ggplot2", "mvtnorm", "purrr", "Rdpack", "stringr", "tibble", "tidyr"] + "depends": ["Rdpack", "dplyr", "ggplot2", "mvtnorm", "purrr", "stringr", "tibble", "tidyr"] }, "emg": { "name": "emg", @@ -58167,8 +58809,8 @@ }, "emmeans": { "name": "emmeans", - "version": "1.10.2", - "sha256": "08l57dp6ivqqc86m31vabr0n707vr70n4iqidavn05lxgb169gk0", + "version": "1.10.3", + "sha256": "01c2d0kb36lrff5l49kyfl2j3byzblmhw2jkz215hhl8jmyk0akv", "depends": ["estimability", "mvtnorm", "numDeriv"] }, "emoa": { @@ -58247,7 +58889,7 @@ "name": "emuR", "version": "2.5.0", "sha256": "0mlcqi9lwqrjilc2nynrl7aqkbqixbdcwzw3rn7mgc8m7cb7s8pq", - "depends": ["base64enc", "cli", "DBI", "dplyr", "httpuv", "httr", "jsonlite", "mime", "purrr", "readr", "rlang", "RSQLite", "rstudioapi", "shiny", "stringr", "tibble", "tidyr", "uuid", "V8", "wrassp"] + "depends": ["DBI", "RSQLite", "V8", "base64enc", "cli", "dplyr", "httpuv", "httr", "jsonlite", "mime", "purrr", "readr", "rlang", "rstudioapi", "shiny", "stringr", "tibble", "tidyr", "uuid", "wrassp"] }, "emulator": { "name": "emulator", @@ -58283,7 +58925,7 @@ "name": "endogeneity", "version": "2.1.3", "sha256": "19hhs46sz7m7qsnwrz81740iq6g8n0z3rnw2shv6sakc5z0z7jga", - "depends": ["data_table", "MASS", "maxLik", "pbivnorm", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "data_table", "maxLik", "pbivnorm", "statmod"] }, "endogenous": { "name": "endogenous", @@ -58307,13 +58949,13 @@ "name": "energy", "version": "1.7-11", "sha256": "04b55ckmaqbnlpifg4w7smvly03kqycklvbg9x8d4yf902q8z7y2", - "depends": ["boot", "gsl", "Rcpp"] + "depends": ["Rcpp", "boot", "gsl"] }, "energyr": { "name": "energyr", - "version": "0.1.2", - "sha256": "0gjw2cvpvhyywxlx3vfkhlh7zjwig46z1zwdc01zxwflvdx3z40n", - "depends": ["RgoogleMaps"] + "version": "0.1.3", + "sha256": "0g4zsnpbsgyvkcvsrpwwi17zbkj51zavsps53lsny4wrlwr3fg4v", + "depends": [] }, "enerscape": { "name": "enerscape", @@ -58325,7 +58967,7 @@ "name": "enetLTS", "version": "1.1.0", "sha256": "1lah9ai9skshz0rq3r1smvy69j443m22h1dihl42gy2568998q4v", - "depends": ["cvTools", "ggplot2", "glmnet", "reshape", "robustbase", "robustHD"] + "depends": ["cvTools", "ggplot2", "glmnet", "reshape", "robustHD", "robustbase"] }, "english": { "name": "english", @@ -58343,13 +58985,13 @@ "name": "enmSdmX", "version": "1.1.6", "sha256": "0hwj7xa19inifajqbgzyxcjgi0gz49yqyfbdvgdwmh8f81i99hip", - "depends": ["AICcmodavg", "boot", "data_table", "doParallel", "DT", "foreach", "gbm", "ks", "maxnet", "mgcv", "omnibus", "predicts", "ranger", "rJava", "scales", "sf", "shiny", "sp", "statisfactory", "terra"] + "depends": ["AICcmodavg", "DT", "boot", "data_table", "doParallel", "foreach", "gbm", "ks", "maxnet", "mgcv", "omnibus", "predicts", "rJava", "ranger", "scales", "sf", "shiny", "sp", "statisfactory", "terra"] }, "enmpa": { "name": "enmpa", - "version": "0.1.5", - "sha256": "0r7zr3xgx1w9570965bm13rw24647y47kab313lqb01nwd9vn2vn", - "depends": ["doSNOW", "ellipse", "foreach", "mgcv", "Rcpp", "snow", "terra", "vegan"] + "version": "0.1.8", + "sha256": "07v4jqmppmvarqc8a4z2zhl52z16w2biq7mga3fd6gz5z43c9yb8", + "depends": ["Rcpp", "doSNOW", "ellipse", "foreach", "mgcv", "snow", "terra", "vegan"] }, "enpls": { "name": "enpls", @@ -58361,7 +59003,7 @@ "name": "enrichR", "version": "3.2", "sha256": "1g97q6vqwvb2l02y61343sblarqi433gjl3qmlyxjxq2lnjrnak1", - "depends": ["curl", "ggplot2", "httr", "rjson", "WriteXLS"] + "depends": ["WriteXLS", "curl", "ggplot2", "httr", "rjson"] }, "enrichwith": { "name": "enrichwith", @@ -58409,7 +59051,7 @@ "name": "entropart", "version": "1.6-13", "sha256": "1y2gdfnqz52w03g9zij07fkjhh3yf3qflk75j0bvfk7n727rz2jp", - "depends": ["ape", "EntropyEstimation", "ggplot2", "ggpubr", "reshape2", "rlang", "tibble", "vegan"] + "depends": ["EntropyEstimation", "ape", "ggplot2", "ggpubr", "reshape2", "rlang", "tibble", "vegan"] }, "entropy": { "name": "entropy", @@ -58445,13 +59087,13 @@ "name": "envi", "version": "0.1.19", "sha256": "04hh4fgkaw8zzsjf2bzwwy3iyknfaipqd7p5icysx6il5i8hd79y", - "depends": ["concaveman", "cvAUC", "doFuture", "doRNG", "fields", "foreach", "future", "iterators", "pls", "ROCR", "sf", "sparr", "spatstat_geom", "terra"] + "depends": ["ROCR", "concaveman", "cvAUC", "doFuture", "doRNG", "fields", "foreach", "future", "iterators", "pls", "sf", "sparr", "spatstat_geom", "terra"] }, "enviGCMS": { "name": "enviGCMS", "version": "0.7.1", "sha256": "1rk7y24lld16zk7f3aak3zf9i3xd27l8mffcvlxwqi7cpl1pqa9b", - "depends": ["animation", "BiocParallel", "data_table", "igraph", "mixtools", "RColorBrewer", "Rdisop"] + "depends": ["BiocParallel", "RColorBrewer", "Rdisop", "animation", "data_table", "igraph", "mixtools"] }, "enviPat": { "name": "enviPat", @@ -58481,7 +59123,7 @@ "name": "envoutliers", "version": "1.1.0", "sha256": "1wgrrkkpkmf300qb56mq6nxigwnpq551sjxlk05lk3ckawx66srf", - "depends": ["car", "changepoint", "ecp", "ismev", "lokern", "MASS", "robustbase"] + "depends": ["MASS", "car", "changepoint", "ecp", "ismev", "lokern", "robustbase"] }, "envstat": { "name": "envstat", @@ -58491,8 +59133,8 @@ }, "envvar": { "name": "envvar", - "version": "0.1.1", - "sha256": "161ncksw9l0fjf54i9yv8gfq5vggiv50sphfdc7ik7m3avdw1hqs", + "version": "0.1.2", + "sha256": "1nrcnipxljpwavfmm5m107zihvm2dj07wgrgkpzx3ph2mzjbzx81", "depends": ["cli", "fs", "lubridate", "rlang"] }, "eoR": { @@ -58505,7 +59147,7 @@ "name": "eoa3", "version": "1.0.0.1", "sha256": "1qqdkxg4jsnqn6j0pa73g3as3hv9y2xh2jg2axj0i11jr5x68ars", - "depends": ["actuar", "GenEst", "MASS", "rjags", "survival", "VGAM"] + "depends": ["GenEst", "MASS", "VGAM", "actuar", "rjags", "survival"] }, "eodhd": { "name": "eodhd", @@ -58517,7 +59159,7 @@ "name": "eoffice", "version": "0.2.2", "sha256": "0nxyllragxn5bq28x37vkx16vi4y9af5nly1pslqrvvarl21ics4", - "depends": ["broom", "devEMF", "dplyr", "flextable", "ggplot2", "ggplotify", "htmlwidgets", "magick", "magrittr", "officer", "plotly", "R_devices", "rvg"] + "depends": ["R_devices", "broom", "devEMF", "dplyr", "flextable", "ggplot2", "ggplotify", "htmlwidgets", "magick", "magrittr", "officer", "plotly", "rvg"] }, "epade": { "name": "epade", @@ -58547,7 +59189,7 @@ "name": "epca", "version": "1.1.0", "sha256": "0ikncmrvcdixa209lrjb84rdsl78isi815a461i7lfmmln9myqk2", - "depends": ["clue", "GPArotation", "irlba", "Matrix"] + "depends": ["GPArotation", "Matrix", "clue", "irlba"] }, "epe4md": { "name": "epe4md", @@ -58557,9 +59199,9 @@ }, "eph": { "name": "eph", - "version": "1.0.0", - "sha256": "1gr0j5xxdmi10d4n742r9764134fsh0xxqdfz5jk5df1z16wh7g2", - "depends": ["attempt", "cli", "curl", "dplyr", "expss", "htmltools", "httr", "leaflet", "purrr", "readxl", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "zoo"] + "version": "1.0.2", + "sha256": "02yl12chvqz02dk7f1asb21axr4g6yyd91dzpjcggdv6zrjpfbvx", + "depends": ["cli", "curl", "dplyr", "expss", "htmltools", "httr", "leaflet", "purrr", "readxl", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "zoo"] }, "epiCleanr": { "name": "epiCleanr", @@ -58567,11 +59209,17 @@ "sha256": "1m5qz7qkly9waj1w8x0hrz28cc4vzn6psqs4q39x1fhxlgip0rih", "depends": ["countrycode", "crayon", "dplyr", "ggplot2", "glue", "janitor", "purrr", "rio", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "withr"] }, + "epiCo": { + "name": "epiCo", + "version": "1.0.0", + "sha256": "1x7icsihh7yk0l13xr5l2jsx2hwxdww8gi8pl9xil5hjclpiasbi", + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggraph", "igraph", "incidence", "leaflet", "lubridate", "magrittr", "rlang", "scales", "spdep", "treemapify"] + }, "epiDisplay": { "name": "epiDisplay", "version": "3.5.0.2", "sha256": "0430mwnaa0qamdyvmwkh37ic0kp4hq8mr5nxkc97mhhl7djw0y92", - "depends": ["foreign", "MASS", "nnet", "survival"] + "depends": ["MASS", "foreign", "nnet", "survival"] }, "epiR": { "name": "epiR", @@ -58589,7 +59237,7 @@ "name": "epicasting", "version": "0.1.0", "sha256": "191kxjrr8h44i7a7dpxziqhbcnbmhgcc5b7ddn9cnvvjqmbwmvl2", - "depends": ["forecast", "Metrics", "wavelets"] + "depends": ["Metrics", "forecast", "wavelets"] }, "epicontacts": { "name": "epicontacts", @@ -58605,15 +59253,15 @@ }, "epidatr": { "name": "epidatr", - "version": "1.1.1", - "sha256": "1qiidg3fq2ccm6l8r080fg9mwdvcnksl338z2navv9w4jq7kjwr8", - "depends": ["cachem", "checkmate", "cli", "glue", "httr", "jsonlite", "magrittr", "MMWRweek", "openssl", "purrr", "rappdirs", "readr", "tibble", "usethis", "xml2"] + "version": "1.2.0", + "sha256": "0x7hx5cc6w62clbpkpr6nwmzhb4nwb5kb8x324ci8llza2gdi9lk", + "depends": ["MMWRweek", "cachem", "checkmate", "cli", "glue", "httr", "jsonlite", "magrittr", "openssl", "purrr", "rappdirs", "readr", "tibble", "usethis", "xml2"] }, "epidm": { "name": "epidm", "version": "1.0.4", "sha256": "0ncjfhq45gs1w0kpkpdwfs43iccl6pq8yrc2999g3r5dsiw06lyq", - "depends": ["data_table", "DBI", "odbc", "phonics", "purrr", "readr", "stringi", "stringr"] + "depends": ["DBI", "data_table", "odbc", "phonics", "purrr", "readr", "stringi", "stringr"] }, "epifitter": { "name": "epifitter", @@ -58635,9 +59283,9 @@ }, "epigrowthfit": { "name": "epigrowthfit", - "version": "0.15.2", - "sha256": "1wzb92baz3aw3y15fdc3r8nanjzkgshhbi57hq7x8ybdzrwn6rz8", - "depends": ["Matrix", "nlme", "RcppEigen", "TMB"] + "version": "0.15.3", + "sha256": "0j5gml3glnfsmc76qy554bmqx2g80y3kdrnbabzx0hqaz8sz8fgl", + "depends": ["Matrix", "RcppEigen", "TMB", "nlme"] }, "epikit": { "name": "epikit", @@ -58673,7 +59321,7 @@ "name": "epinetr", "version": "0.96", "sha256": "0jg8pwbxlgrk7mqawsrifk724pi5qn0amh6x2fq54a0hmqdpdjns", - "depends": ["GA", "ggplot2", "igraph", "Rcpp", "RcppAlgos", "reshape2", "vcfR"] + "depends": ["GA", "Rcpp", "RcppAlgos", "ggplot2", "igraph", "reshape2", "vcfR"] }, "epiomics": { "name": "epiomics", @@ -58685,7 +59333,7 @@ "name": "epiphy", "version": "0.5.0", "sha256": "08jvbmj6l90102cpf00h5dzq7a700zwvy31wz7d5lxfn91x83gb9", - "depends": ["ggplot2", "msm", "pbapply", "Rcpp", "transport"] + "depends": ["Rcpp", "ggplot2", "msm", "pbapply", "transport"] }, "episcan": { "name": "episcan", @@ -58703,7 +59351,7 @@ "name": "epitab", "version": "0.2.2", "sha256": "0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc", - "depends": ["kableExtra", "knitr", "MASS", "survival", "xml2"] + "depends": ["MASS", "kableExtra", "knitr", "survival", "xml2"] }, "epitools": { "name": "epitools", @@ -58721,7 +59369,7 @@ "name": "epitweetr", "version": "2.2.16", "sha256": "0xniwd6r1jyn2ifw8y4d9c3dl4maik6p4lw0nghb9z9q9xigjlak", - "depends": ["bit64", "crul", "curl", "dplyr", "DT", "emayili", "future", "ggplot2", "htmltools", "httpuv", "httr", "janitor", "jsonlite", "keyring", "knitr", "lifecycle", "magrittr", "openxlsx", "plotly", "plyr", "processx", "readxl", "rlang", "rmarkdown", "rnaturalearthdata", "rtweet", "shiny", "sp", "stringr", "tibble", "tidytext", "tidyverse", "xml2", "xtable"] + "depends": ["DT", "bit64", "crul", "curl", "dplyr", "emayili", "future", "ggplot2", "htmltools", "httpuv", "httr", "janitor", "jsonlite", "keyring", "knitr", "lifecycle", "magrittr", "openxlsx", "plotly", "plyr", "processx", "readxl", "rlang", "rmarkdown", "rnaturalearthdata", "rtweet", "shiny", "sp", "stringr", "tibble", "tidytext", "tidyverse", "xml2", "xtable"] }, "epiworldR": { "name": "epiworldR", @@ -58739,7 +59387,7 @@ "name": "eplusr", "version": "0.16.2", "sha256": "1b9kqrma6ayzsj146fdb2w2pwzmz1r6yy9g0abhx745gll8g9gqr", - "depends": ["callr", "checkmate", "cli", "data_table", "lubridate", "processx", "R6", "RSQLite", "stringi", "units"] + "depends": ["R6", "RSQLite", "callr", "checkmate", "cli", "data_table", "lubridate", "processx", "stringi", "units"] }, "eply": { "name": "eply", @@ -58751,7 +59399,7 @@ "name": "epm", "version": "1.1.2", "sha256": "1zziy07ydrxma5qhnxha5g2zm02yi6bvw2vv3w6sanrj9p4kakav", - "depends": ["ape", "pbapply", "Rcpp", "RcppProgress", "sf", "terra", "viridisLite"] + "depends": ["Rcpp", "RcppProgress", "ape", "pbapply", "sf", "terra", "viridisLite"] }, "epmrob": { "name": "epmrob", @@ -58769,7 +59417,7 @@ "name": "epoc", "version": "0.2.6-1.1", "sha256": "1qlj4cl7mh5k52v2ippfs3cish5iadnix5w46p25hjqiriksclna", - "depends": ["elasticnet", "irr", "lassoshooting", "Matrix", "survival"] + "depends": ["Matrix", "elasticnet", "irr", "lassoshooting", "survival"] }, "epocakir": { "name": "epocakir", @@ -58787,7 +59435,7 @@ "name": "epos", "version": "1.1", "sha256": "13ajaiin7n9z9rhmczlxbrpma5d3wa1wh7gcnw7xa39wsinvmn9s", - "depends": ["cowplot", "ggplot2", "gridExtra", "hash", "mongolite", "stringr", "testthat", "TopKLists", "VennDiagram", "xtable"] + "depends": ["TopKLists", "VennDiagram", "cowplot", "ggplot2", "gridExtra", "hash", "mongolite", "stringr", "testthat", "xtable"] }, "epoxy": { "name": "epoxy", @@ -58817,13 +59465,13 @@ "name": "epwshiftr", "version": "0.1.4", "sha256": "075yvrxyjswkx03fwns2pa7plz5hjlpjyp5xq48s7i0ya3x9x55w", - "depends": ["checkmate", "cli", "data_table", "eplusr", "fst", "future_apply", "jsonlite", "PCICt", "progressr", "psychrolib", "R6", "rappdirs", "RNetCDF", "units"] + "depends": ["PCICt", "R6", "RNetCDF", "checkmate", "cli", "data_table", "eplusr", "fst", "future_apply", "jsonlite", "progressr", "psychrolib", "rappdirs", "units"] }, "epxToR": { "name": "epxToR", "version": "0.4-1", "sha256": "00m64ham9fd9dsw37ic2m62fy4pvmwfwmjx8cg6n4rwbgq9q49sg", - "depends": ["httr", "XML"] + "depends": ["XML", "httr"] }, "eq5d": { "name": "eq5d", @@ -58835,7 +59483,7 @@ "name": "eq5dsuite", "version": "1.0.0", "sha256": "1dy52swx5mq9xs2c0c4xa01dkpzffbyydfk6h83wh7hy27ml4zr8", - "depends": ["dplyr", "ggplot2", "moments", "rappdirs", "RColorBrewer", "rlang", "scales", "stringr", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "moments", "rappdirs", "rlang", "scales", "stringr", "tidyr"] }, "equalCovs": { "name": "equalCovs", @@ -58863,15 +59511,15 @@ }, "equateIRT": { "name": "equateIRT", - "version": "2.4.0", - "sha256": "0i3bvldalqrlz9qalpylybn896nkdpm5xk4m62sxhm1bfrd0nm98", + "version": "2.5.0", + "sha256": "09g4wk41fi6sav71cnkj1gy43cb1jc8yz408kxhccyb22z8ib4z0", "depends": ["mirt", "statmod"] }, "equateMultiple": { "name": "equateMultiple", "version": "0.1.2", "sha256": "150srrf8msr6jzyri6632xws0g2lnj34kvj7hqrvbiwkad1aqq7m", - "depends": ["equateIRT", "numDeriv", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["Rcpp", "RcppArmadillo", "equateIRT", "numDeriv", "statmod"] }, "equatiomatic": { "name": "equatiomatic", @@ -58895,13 +59543,13 @@ "name": "equivalence", "version": "0.7.2", "sha256": "170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79", - "depends": ["boot", "lattice", "PairedData"] + "depends": ["PairedData", "boot", "lattice"] }, "equivalenceTest": { "name": "equivalenceTest", "version": "0.0.1.1", "sha256": "1lr1qc4mv8f9hwqidj1rwhxqm1fb8cf1hnb1k32xpdqwzsxbfa47", - "depends": ["cubature", "polynom", "Rdpack", "rootSolve"] + "depends": ["Rdpack", "cubature", "polynom", "rootSolve"] }, "era": { "name": "era", @@ -58913,7 +59561,7 @@ "name": "erah", "version": "2.0.1", "sha256": "136wh0gaygc7mkj507bjmgzv79jcap0whngd501gg47zf7b8jzxx", - "depends": ["furrr", "future", "HiClimR", "igraph", "osd", "progress", "quantreg", "signal", "tibble"] + "depends": ["HiClimR", "furrr", "future", "igraph", "osd", "progress", "quantreg", "signal", "tibble"] }, "erboost": { "name": "erboost", @@ -58927,12 +59575,6 @@ "sha256": "0rs4yhm9sjnqkrgqqy6b8wj9fgk910hxc8d7zi4qwql0v1gid27l", "depends": [] }, - "erer": { - "name": "erer", - "version": "3.1", - "sha256": "03pdq3p5c5f20959hgk5q2cx5x10bpgf0qg4z1nvsf31vc5ni77v", - "depends": ["lmtest", "systemfit", "tseries", "urca"] - }, "erfe": { "name": "erfe", "version": "0.0.1", @@ -58943,37 +59585,37 @@ "name": "ergMargins", "version": "1.3", "sha256": "0mr01ckxn8l8fjxlld05ag18d04h17wbnrgpry46hz38axl41zzj", - "depends": ["btergm", "dplyr", "ergm", "Matrix", "network", "numDeriv", "sampling", "sna"] + "depends": ["Matrix", "btergm", "dplyr", "ergm", "network", "numDeriv", "sampling", "sna"] }, "ergm": { "name": "ergm", "version": "4.6.0", "sha256": "1xx767l4z38wkxlxwq62y4khjjsz10fsy36x0s74fnzb746acwdl", - "depends": ["coda", "knitr", "lpSolveAPI", "magrittr", "MASS", "Matrix", "memoise", "network", "purrr", "Rdpack", "rlang", "rle", "robustbase", "statnet_common", "stringr", "tibble", "trust"] + "depends": ["MASS", "Matrix", "Rdpack", "coda", "knitr", "lpSolveAPI", "magrittr", "memoise", "network", "purrr", "rlang", "rle", "robustbase", "statnet_common", "stringr", "tibble", "trust"] }, "ergm_count": { "name": "ergm.count", "version": "4.1.2", "sha256": "085h2dn9dz9i05kjdm3ysgp7lzqdniq16xrvc11b4q1g9av71klv", - "depends": ["ergm", "network", "Rdpack", "statnet_common"] + "depends": ["Rdpack", "ergm", "network", "statnet_common"] }, "ergm_ego": { "name": "ergm.ego", "version": "1.1.0", "sha256": "1wflvj946xkiy0xzq53x13v9iqj64hc7wcqzqazkvlngigibh5gl", - "depends": ["dplyr", "egor", "ergm", "network", "purrr", "RColorBrewer", "statnet_common", "survey", "tibble"] + "depends": ["RColorBrewer", "dplyr", "egor", "ergm", "network", "purrr", "statnet_common", "survey", "tibble"] }, "ergm_multi": { "name": "ergm.multi", "version": "0.2.1", "sha256": "00hrl0cz81kjfp49sc3ma4jxxxgnjc6aald2drs190ks43bx17g0", - "depends": ["ergm", "glue", "Matrix", "network", "purrr", "Rdpack", "rlang", "rle", "statnet_common", "tibble"] + "depends": ["Matrix", "Rdpack", "ergm", "glue", "network", "purrr", "rlang", "rle", "statnet_common", "tibble"] }, "ergm_rank": { "name": "ergm.rank", "version": "4.1.1", "sha256": "059s4zdb5fm8wl130nnxww1ry57d3p6rd5zmn9pf94iisjpkxxij", - "depends": ["ergm", "network", "Rdpack", "statnet_common"] + "depends": ["Rdpack", "ergm", "network", "statnet_common"] }, "ergmgp": { "name": "ergmgp", @@ -58991,19 +59633,19 @@ "name": "ergmito", "version": "0.3-1", "sha256": "0djcfwxr4diwfjvim6mbz1g28bzsd94s78xw5kvn5vahiwjpdd61", - "depends": ["ergm", "MASS", "network", "Rcpp", "RcppArmadillo", "texreg"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ergm", "network", "texreg"] }, "erify": { "name": "erify", - "version": "0.4.0", - "sha256": "014q4crfa92i4fb4mrbl68ai0l8asjwwnv3l2m11gfnny41p4bks", + "version": "0.6.0", + "sha256": "0qgv1lsg30gpris1q5wh258sspxiyccs18mzvsgs0kdynhf0aj0p", "depends": ["glue"] }, "ern": { "name": "ern", "version": "2.0.0", "sha256": "13hw1ji3d8dqr8al4rykg75a392w4306gmr3m2mlrwdy7rzi9pyi", - "depends": ["assertthat", "coda", "dplyr", "EpiEstim", "ggplot2", "lubridate", "patchwork", "rjags", "runjags", "stringr", "tibble", "tidyr", "zoo"] + "depends": ["EpiEstim", "assertthat", "coda", "dplyr", "ggplot2", "lubridate", "patchwork", "rjags", "runjags", "stringr", "tibble", "tidyr", "zoo"] }, "erp_easy": { "name": "erp.easy", @@ -59011,12 +59653,6 @@ "sha256": "193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij", "depends": ["gtools", "plyr", "signal"] }, - "err": { - "name": "err", - "version": "0.2.0", - "sha256": "1915b0vmqdd8whwdrqjphld1jaxawh5b7di6wf7q3sx779lblsrs", - "depends": [] - }, "errorist": { "name": "errorist", "version": "0.1.2", @@ -59031,8 +59667,8 @@ }, "errors": { "name": "errors", - "version": "0.4.1", - "sha256": "0pyp1adhyp5kak4x9niyj3ncmda1xydsx2sfa7gjbm2fzazyslbh", + "version": "0.4.2", + "sha256": "17almk09rl6q0g88kwkdcf30280s56ay6vx3sancnn9qfsp9zzrg", "depends": [] }, "errum": { @@ -59057,7 +59693,7 @@ "name": "esaddle", "version": "0.0.7", "sha256": "1r79qcirlx7g9w523nz81f5f22paid5dhag2lqj7jf33w0ggaknn", - "depends": ["doParallel", "mvnfast", "plyr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "mvnfast", "plyr"] }, "esaps": { "name": "esaps", @@ -59079,21 +59715,21 @@ }, "escalation": { "name": "escalation", - "version": "0.1.9", - "sha256": "1y25xmwf4gb5d5n6z8n06ignjkcrgffak5ca4gjw89pr05284q5q", - "depends": ["binom", "BOIN", "dfcrm", "DiagrammeR", "dplyr", "ggplot2", "gtools", "magrittr", "mvtnorm", "purrr", "R6", "RColorBrewer", "stringr", "testthat", "tibble", "tidyr", "tidyselect", "trialr", "viridis"] + "version": "0.1.10", + "sha256": "0qsr58jcw48lypddbyfpkx51riasxzq2c6098zhcypj8kf98rfvw", + "depends": ["BOIN", "DiagrammeR", "R6", "RColorBrewer", "binom", "dfcrm", "dplyr", "ggplot2", "gtools", "magrittr", "mvtnorm", "purrr", "stringr", "testthat", "tibble", "tidyr", "tidyselect", "trialr", "viridis"] }, "esci": { "name": "esci", - "version": "1.0.2", - "sha256": "0rc43xwkn1l5qxkki88d51yp3qbdw2r369f6i04r5yxa042a5kqj", - "depends": ["ggbeeswarm", "ggdist", "ggh4x", "ggplot2", "ggtext", "glue", "jmvcore", "mathjaxr", "metafor", "multcomp", "R6", "Rdpack", "rlang", "sadists", "statpsych", "stringr"] + "version": "1.0.3", + "sha256": "1mb23j6yhlakzmz2ph6w3wbasjl5wv2l3i8qjg8knkm2h1yg3kgc", + "depends": ["R6", "Rdpack", "ggbeeswarm", "ggdist", "ggh4x", "ggplot2", "ggtext", "glue", "jmvcore", "mathjaxr", "metafor", "multcomp", "rlang", "sadists", "statpsych", "stringr"] }, "eseis": { "name": "eseis", "version": "0.7.3", "sha256": "0fn55mb6yklwjh0ihczjchxrxvnblzbifq59158zfmz407rrfk5g", - "depends": ["caTools", "colorspace", "extraDistr", "fftw", "IRISSeismic", "matrixStats", "minpack_lm", "Rcpp", "reticulate", "rmarkdown", "shiny", "signal", "terra", "XML"] + "depends": ["IRISSeismic", "Rcpp", "XML", "caTools", "colorspace", "extraDistr", "fftw", "matrixStats", "minpack_lm", "reticulate", "rmarkdown", "shiny", "signal", "terra"] }, "eselect": { "name": "eselect", @@ -59105,19 +59741,19 @@ "name": "esem", "version": "2.0.0", "sha256": "035f864na44lqdya6zbivyg1advan9mrfz5c61hxkvlv63b3v8ay", - "depends": ["dplyr", "GPArotation", "lavaan", "magrittr", "psych", "rlang", "tibble", "tidyr"] + "depends": ["GPArotation", "dplyr", "lavaan", "magrittr", "psych", "rlang", "tibble", "tidyr"] }, "esemifar": { "name": "esemifar", "version": "2.0.1", "sha256": "1ypylcyyq516d9w1s920m92h7a6c6yb837720hbmx37vjjz6l4dm", - "depends": ["fracdiff", "furrr", "future", "ggplot2", "Rcpp", "RcppArmadillo", "smoots"] + "depends": ["Rcpp", "RcppArmadillo", "fracdiff", "furrr", "future", "ggplot2", "smoots"] }, "eshrink": { "name": "eshrink", "version": "0.1.2", "sha256": "0min4j1dyd08i0fyn9a4iasjlhq08bn74bjz8vj1gq9l114v795k", - "depends": ["glmnet", "MASS"] + "depends": ["MASS", "glmnet"] }, "esmisc": { "name": "esmisc", @@ -59135,31 +59771,31 @@ "name": "esmtools", "version": "1.0.1", "sha256": "0jrq3ccz6zv1ic7a5sqvk8h3vgrq1lkkckadsik8x1a9bnsv0qii", - "depends": ["base64enc", "dplyr", "DT", "fs", "ggplot2", "ggpubr", "htmltools", "jsonlite", "kableExtra", "knitr", "lubridate", "stringr", "tidyr"] + "depends": ["DT", "base64enc", "dplyr", "fs", "ggplot2", "ggpubr", "htmltools", "jsonlite", "kableExtra", "knitr", "lubridate", "stringr", "tidyr"] }, "espadon": { "name": "espadon", - "version": "1.7.2", - "sha256": "08pjzi992apgkxiwv88m0gq7i156lqz5vmlkm5lfcx8w3bjj0j3d", - "depends": ["colorspace", "DT", "igraph", "js", "mathjaxr", "Matrix", "misc3d", "Morpho", "openxlsx", "progress", "qs", "Rcpp", "Rdpack", "rgl", "Rvcg", "shiny", "shinyWidgets", "sodium"] + "version": "1.7.4", + "sha256": "057c321ww1fiwpsybrgyn9rs18j28xq3smv5bbxk370zz7fn9mch", + "depends": ["DT", "Matrix", "Morpho", "Rcpp", "Rdpack", "Rvcg", "colorspace", "igraph", "js", "mathjaxr", "misc3d", "openxlsx", "progress", "qs", "rgl", "shiny", "shinyWidgets", "sodium"] }, "esquisse": { "name": "esquisse", "version": "2.0.0", "sha256": "0w37x5w6kvscwbr6d157ahmaigafj3ccn3zjasqazrzzlwjns3lm", - "depends": ["bslib", "datamods", "downlit", "ggplot2", "htmltools", "jsonlite", "phosphoricons", "rlang", "rstudioapi", "scales", "shiny", "shinybusy", "shinyWidgets"] + "depends": ["bslib", "datamods", "downlit", "ggplot2", "htmltools", "jsonlite", "phosphoricons", "rlang", "rstudioapi", "scales", "shiny", "shinyWidgets", "shinybusy"] }, "esreg": { "name": "esreg", "version": "0.6.2", "sha256": "1djyx8cc1pfza5n5ipg990jwwc1fjlsiz817iifwv9iw8g9vkda4", - "depends": ["Formula", "quantreg", "Rcpp", "RcppArmadillo"] + "depends": ["Formula", "Rcpp", "RcppArmadillo", "quantreg"] }, "ess": { "name": "ess", "version": "1.1.2", "sha256": "1cmw20nn39ssyqiyn50w0ws28mq4cd26yhzr7mv97haaqjjjkv5h", - "depends": ["igraph", "Rcpp"] + "depends": ["Rcpp", "igraph"] }, "essHist": { "name": "essHist", @@ -59201,19 +59837,19 @@ "name": "estimateW", "version": "0.0.1", "sha256": "0fgbyfnxxs6kp9p17ljvj72q5vd4xn7kwh4zbmzjx45cdq101bjv", - "depends": ["Matrix", "matrixcalc", "plot_matrix", "R6"] + "depends": ["Matrix", "R6", "matrixcalc", "plot_matrix"] }, "estimators": { "name": "estimators", "version": "0.8.5", "sha256": "16zpgscxn3f3alfi44yinacrf9222wbdg7ac1bs91bax7zn3k0zd", - "depends": ["extraDistr", "ggh4x", "ggplot2", "Matrix", "progress"] + "depends": ["Matrix", "extraDistr", "ggh4x", "ggplot2", "progress"] }, "estimatr": { "name": "estimatr", "version": "1.0.4", "sha256": "1v9fzqp7h48lb70d2kln4wq9fl36dsxhv7871hnmggkykzax3pvc", - "depends": ["Formula", "generics", "Rcpp", "RcppEigen", "rlang"] + "depends": ["Formula", "Rcpp", "RcppEigen", "generics", "rlang"] }, "estimraw": { "name": "estimraw", @@ -59231,13 +59867,13 @@ "name": "estprod", "version": "1.2", "sha256": "0pnpg8w6i1dmkcn6afj2jsm5mzvbxka80np1bldcxgmylrp5s35p", - "depends": ["boot", "Formula", "gmm", "lazyeval", "minpack_lm"] + "depends": ["Formula", "boot", "gmm", "lazyeval", "minpack_lm"] }, "esvis": { "name": "esvis", "version": "0.3.1", "sha256": "0bb91khnrn8v3d6hbbin72032w7w8p0jchbr0bzwyfq5f6l4hwka", - "depends": ["dplyr", "ggplot2", "Hmisc", "magrittr", "purrr", "rlang", "sfsmisc", "tibble", "tidyr"] + "depends": ["Hmisc", "dplyr", "ggplot2", "magrittr", "purrr", "rlang", "sfsmisc", "tibble", "tidyr"] }, "et_nwfva": { "name": "et.nwfva", @@ -59273,7 +59909,7 @@ "name": "etm", "version": "1.1.1", "sha256": "1hvrplmdpjjpjji663rw0vjbbrzj2nvr04d1nkc8bf46p4ixyxgy", - "depends": ["data_table", "lattice", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "lattice", "survival"] }, "etrader": { "name": "etrader", @@ -59285,7 +59921,7 @@ "name": "etree", "version": "0.1.0", "sha256": "1qnky9jqcfbq60s4h3igyq77r7f559i714i5g7ss14zcx86zkpdi", - "depends": ["brainGraph", "cluster", "energy", "fda_usc", "igraph", "NetworkDistance", "partykit", "survival", "TDA", "usedist"] + "depends": ["NetworkDistance", "TDA", "brainGraph", "cluster", "energy", "fda_usc", "igraph", "partykit", "survival", "usedist"] }, "etrm": { "name": "etrm", @@ -59303,7 +59939,7 @@ "name": "etwfe", "version": "0.4.0", "sha256": "06y9xw8fdfijxv4kh0fxin6dgj6vavnjnyh9a75m14i0i69hd8bd", - "depends": ["data_table", "fixest", "Formula", "marginaleffects"] + "depends": ["Formula", "data_table", "fixest", "marginaleffects"] }, "eudract": { "name": "eudract", @@ -59315,7 +59951,7 @@ "name": "eufmdis.adapt", "version": "0.1.0", "sha256": "0n8qj5dhc32ckbjiwvcfc904j9jilyb87x325a2vbgb35gfhf7sn", - "depends": ["dplyr", "DT", "ggplot2", "htmltools", "magrittr", "rlang", "shiny", "shinydashboard", "shinyWidgets", "tibble", "tidyselect"] + "depends": ["DT", "dplyr", "ggplot2", "htmltools", "magrittr", "rlang", "shiny", "shinyWidgets", "shinydashboard", "tibble", "tidyselect"] }, "eulerian": { "name": "eulerian", @@ -59327,7 +59963,7 @@ "name": "eulerr", "version": "7.0.2", "sha256": "0aw4l338nymrmna7q01vxn2cc7wyzz3lhf1bwazy55qa4hmww3af", - "depends": ["GenSA", "polyclip", "polylabelr", "Rcpp", "RcppArmadillo"] + "depends": ["GenSA", "Rcpp", "RcppArmadillo", "polyclip", "polylabelr"] }, "eummd": { "name": "eummd", @@ -59343,21 +59979,21 @@ }, "eurlex": { "name": "eurlex", - "version": "0.4.7", - "sha256": "1arpixy6hcqdfn83rkb23s5zgvhkw1nv2hjv09k2k0g8s642y6yf", - "depends": ["antiword", "curl", "dplyr", "httr", "magrittr", "pdftools", "readr", "rlang", "rvest", "stringr", "tidyr", "xml2"] + "version": "0.4.8", + "sha256": "13f8bfkcda0n6fnh8hp398prx6nb18wfzxy7bklvj91s0y158j8s", + "depends": ["antiword", "curl", "dplyr", "httr", "magrittr", "pdftools", "rlang", "rvest", "stringr", "tidyr", "xml2"] }, "eurocordexr": { "name": "eurocordexr", "version": "0.2.4", "sha256": "1srn0n1imp975b3sfaz27yz1fxm8gs7h34wa6mf5xw551gm6kwwv", - "depends": ["data_table", "fs", "lubridate", "magrittr", "ncdf4", "ncdf4_helpers", "PCICt"] + "depends": ["PCICt", "data_table", "fs", "lubridate", "magrittr", "ncdf4", "ncdf4_helpers"] }, "eurodata": { "name": "eurodata", "version": "1.7.0", "sha256": "0xw6b178jpg4dlgx6af1bh6z2m6apd12lbz03yzp7ay93ghf7zsi", - "depends": ["data_table", "magrittr", "memoise", "R_utils", "Rcpp", "stringr", "xml2", "xtable"] + "depends": ["R_utils", "Rcpp", "data_table", "magrittr", "memoise", "stringr", "xml2", "xtable"] }, "euroleaguer": { "name": "euroleaguer", @@ -59369,7 +60005,7 @@ "name": "europeanaR", "version": "0.1.0", "sha256": "11cr8n64yv50zwib9wkvk1j43p9a1cmxmzznxykczv43l193kjg7", - "depends": ["data_table", "httr", "jsonlite", "magrittr", "Rdpack"] + "depends": ["Rdpack", "data_table", "httr", "jsonlite", "magrittr"] }, "europepmc": { "name": "europepmc", @@ -59387,7 +60023,7 @@ "name": "eurostat", "version": "4.0.0", "sha256": "13na6hdwz67f27vd3kvh6brxwxdf76sii0gf2r73ncs6db16q4pm", - "depends": ["classInt", "countrycode", "curl", "data_table", "digest", "dplyr", "httr2", "ISOweek", "jsonlite", "lubridate", "rappdirs", "readr", "RefManageR", "regions", "rlang", "stringi", "stringr", "tibble", "tidyr", "xml2"] + "depends": ["ISOweek", "RefManageR", "classInt", "countrycode", "curl", "data_table", "digest", "dplyr", "httr2", "jsonlite", "lubridate", "rappdirs", "readr", "regions", "rlang", "stringi", "stringr", "tibble", "tidyr", "xml2"] }, "eva": { "name": "eva", @@ -59405,7 +60041,7 @@ "name": "evalITR", "version": "1.0.0", "sha256": "0szrqcvi9x0wqxlyi1qyzpkj4y93qym8295nddip9ncl67kh2w09", - "depends": ["bartCause", "caret", "cli", "dplyr", "e1071", "forcats", "gbm", "ggdist", "ggplot2", "ggthemes", "glmnet", "grf", "haven", "MASS", "Matrix", "purrr", "quadprog", "rlang", "rpart", "rqPen", "scales", "SuperLearner"] + "depends": ["MASS", "Matrix", "SuperLearner", "bartCause", "caret", "cli", "dplyr", "e1071", "forcats", "gbm", "ggdist", "ggplot2", "ggthemes", "glmnet", "grf", "haven", "purrr", "quadprog", "rlang", "rpart", "rqPen", "scales"] }, "evalR": { "name": "evalR", @@ -59429,13 +60065,13 @@ "name": "evclass", "version": "2.0.2", "sha256": "0khiifgfag8a6nsznnjr7h1vj5v2nzidv0qrkxlg12i42bg3xqpj", - "depends": ["FNN", "ibelief", "R_utils"] + "depends": ["FNN", "R_utils", "ibelief"] }, "evclust": { "name": "evclust", "version": "2.0.3", "sha256": "0z707x770rp7y3sii4w0xk61is2ib79mix14x48n942vb11mc91b", - "depends": ["FNN", "limSolve", "Matrix", "mclust", "plyr", "quadprog", "R_utils"] + "depends": ["FNN", "Matrix", "R_utils", "limSolve", "mclust", "plyr", "quadprog"] }, "evd": { "name": "evd", @@ -59465,7 +60101,7 @@ "name": "eventPred", "version": "0.2.5", "sha256": "1zpl609aka3pnxvam2l94ja4j5mskml7p7gbx7s6zpj49aggkvcf", - "depends": ["dplyr", "erify", "flexsurv", "Matrix", "mvtnorm", "numDeriv", "plotly", "purrr", "rlang", "rstpm2", "shiny", "survival"] + "depends": ["Matrix", "dplyr", "erify", "flexsurv", "mvtnorm", "numDeriv", "plotly", "purrr", "rlang", "rstpm2", "shiny", "survival"] }, "eventTrack": { "name": "eventTrack", @@ -59489,31 +60125,31 @@ "name": "eventstream", "version": "0.1.1", "sha256": "10dngj6xzf072gyz8wcs3g30ihqvxdmg9h3q8m3d3lf17v3a75d6", - "depends": ["abind", "changepoint", "dbscan", "dplyr", "glmnet", "MASS", "tensorA"] + "depends": ["MASS", "abind", "changepoint", "dbscan", "dplyr", "glmnet", "tensorA"] }, "eventstudyr": { "name": "eventstudyr", "version": "1.1.3", "sha256": "0l7sv8kb459sb69rp2y61g7a19i8xhanjd6paajlrha44bxyl1kv", - "depends": ["car", "data_table", "dplyr", "estimatr", "ggplot2", "MASS", "pracma", "rlang", "stringr"] + "depends": ["MASS", "car", "data_table", "dplyr", "estimatr", "ggplot2", "pracma", "rlang", "stringr"] }, "evgam": { "name": "evgam", "version": "1.0.0", "sha256": "0f8a29c2qxlzqadq694j6gwrj8rdq7x1kqwn79di7ycxfi7ifdbq", - "depends": ["mgcv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mgcv"] }, "evian": { "name": "evian", "version": "2.1.0", "sha256": "1slnzq55gg3p16fs22v69mafiggiy5f70sj8fh65lc0hphybh6w2", - "depends": ["doParallel", "foreach", "ProfileLikelihood", "sandwich"] + "depends": ["ProfileLikelihood", "doParallel", "foreach", "sandwich"] }, "evidence": { "name": "evidence", "version": "0.8.10", "sha256": "02kqk95kx4nv13fg6z55a5rv6sq6lv8azg0jjxbkg1j6hg15p7ai", - "depends": ["LaplacesDemon", "lattice", "LearnBayes", "loo", "rstan", "rstanarm"] + "depends": ["LaplacesDemon", "LearnBayes", "lattice", "loo", "rstan", "rstanarm"] }, "evidenceFactors": { "name": "evidenceFactors", @@ -59537,7 +60173,7 @@ "name": "evinf", "version": "0.8.10", "sha256": "142rg6d3ziq5y2qscnfiasg2f27va44gjc4qh8db3z4n1nw076a5", - "depends": ["doParallel", "doRNG", "dplyr", "foreach", "generics", "magrittr", "MASS", "mistr", "MLmetrics", "pscl", "purrr", "Rcpp", "RcppArmadillo", "Rdpack", "rlang", "stringi", "stringr", "tibble", "tidyr"] + "depends": ["MASS", "MLmetrics", "Rcpp", "RcppArmadillo", "Rdpack", "doParallel", "doRNG", "dplyr", "foreach", "generics", "magrittr", "mistr", "pscl", "purrr", "rlang", "stringi", "stringr", "tibble", "tidyr"] }, "evir": { "name": "evir", @@ -59545,16 +60181,22 @@ "sha256": "1h7a7z7v5k33y5hsdfczsri3vpbwspfgazhv4saknv2h11rgfpki", "depends": [] }, + "evitaicossa": { + "name": "evitaicossa", + "version": "0.0-1", + "sha256": "13vxbf3cf0bbdbqj2dw9f5ckih42c5wikdn6mh106yyq27rxw7kb", + "depends": ["Rcpp", "Rdpack", "disordR"] + }, "evmix": { "name": "evmix", "version": "2.12", "sha256": "02rabc9snci00s1x7h0svfr66lmw1wjcdg0149wc52mnccsdaivf", - "depends": ["gsl", "MASS", "SparseM"] + "depends": ["MASS", "SparseM", "gsl"] }, "evoTS": { "name": "evoTS", - "version": "1.0.2", - "sha256": "104lb598rkm17n1as1g32va5aa285b86j4ac3wg4dxp8ckzl738d", + "version": "1.0.3", + "sha256": "0lwv8j4z88xr2x7k7gay42g9dig0vgv0h62br9d1flqlzf1hppd9", "depends": ["MASS", "mvtnorm", "paleoTS", "plotly", "pracma"] }, "evobiR": { @@ -59573,25 +60215,25 @@ "name": "evolqg", "version": "0.3-4", "sha256": "1h4k2sxp67f3qn1cnmy290rgbmpvvj2zlw7gz5lbcgzbf53lb1bd", - "depends": ["ape", "coda", "expm", "ggplot2", "igraph", "Matrix", "MCMCpack", "Morpho", "mvtnorm", "numDeriv", "plyr", "Rcpp", "RcppArmadillo", "reshape2", "vegan"] + "depends": ["MCMCpack", "Matrix", "Morpho", "Rcpp", "RcppArmadillo", "ape", "coda", "expm", "ggplot2", "igraph", "mvtnorm", "numDeriv", "plyr", "reshape2", "vegan"] }, "evolvability": { "name": "evolvability", "version": "2.0.0", "sha256": "0l81d48zvvnbxlx1mj4qwga1kdzk05pzdvsp4ghi93pzzynfqn9s", - "depends": ["ape", "coda", "lme4", "Matrix"] + "depends": ["Matrix", "ape", "coda", "lme4"] }, "evoper": { "name": "evoper", "version": "0.5.0", "sha256": "064fcpd04ws8v6sl0bakiw34jmmfpg1w5pkq94y2gh1c576x4vwz", - "depends": ["boot", "data_table", "deSolve", "futile_logger", "ggplot2", "plot3D", "plyr", "reshape", "RNetLogo", "rrepast"] + "depends": ["RNetLogo", "boot", "data_table", "deSolve", "futile_logger", "ggplot2", "plot3D", "plyr", "reshape", "rrepast"] }, "evprof": { "name": "evprof", "version": "1.1.2", "sha256": "1nkgvx76cvy78pcnrfh8md2j3b9vmsissmq2s2nbb2rral272gnr", - "depends": ["cowplot", "dbscan", "dplyr", "ggplot2", "jsonlite", "lubridate", "MASS", "mclust", "plotly", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["MASS", "cowplot", "dbscan", "dplyr", "ggplot2", "jsonlite", "lubridate", "mclust", "plotly", "purrr", "rlang", "tibble", "tidyr"] }, "evreg": { "name": "evreg", @@ -59603,19 +60245,19 @@ "name": "evsim", "version": "1.5.0", "sha256": "0v057l0qb3x16kw5xdjmw724kg9zlflagkkdvhwgc39z1by1ahbd", - "depends": ["dplyr", "dygraphs", "ggplot2", "jsonlite", "lubridate", "MASS", "purrr", "rlang", "tidyr"] + "depends": ["MASS", "dplyr", "dygraphs", "ggplot2", "jsonlite", "lubridate", "purrr", "rlang", "tidyr"] }, "evt0": { "name": "evt0", - "version": "1.1-4", - "sha256": "0hqsv72wswnmgirhwb671snmg65qb1j77pfvzaqw9mi8lmvqalpq", + "version": "1.1.5", + "sha256": "08a34p0jbphhwiyxnk0yy830w1xr4dxzqj8bij828kxrhzc30pbb", "depends": ["evd"] }, "evtclass": { "name": "evtclass", "version": "1.0", "sha256": "1ny43sry257cxlg56f0lj1szv9ci3ymskj6l5sn43l5a2pq62g4l", - "depends": ["evd", "fitdistrplus", "RANN"] + "depends": ["RANN", "evd", "fitdistrplus"] }, "evtree": { "name": "evtree", @@ -59627,7 +60269,13 @@ "name": "ewoc", "version": "0.3.0", "sha256": "0r8b5vq0qzp3f0dasxmrngldqlymca90sj019rzs1a0qf28wlgbr", - "depends": ["coda", "doParallel", "doRNG", "foreach", "Formula", "ggplot2", "rjags"] + "depends": ["Formula", "coda", "doParallel", "doRNG", "foreach", "ggplot2", "rjags"] + }, + "ewp": { + "name": "ewp", + "version": "0.1.1", + "sha256": "18qcndxr5x6z5m91r9q8lzq0fmwli1w03x91z0rr03n3dw5c3kdx", + "depends": ["BH", "Rcpp"] }, "exCon": { "name": "exCon", @@ -59675,20 +60323,26 @@ "name": "exactextractr", "version": "0.10.0", "sha256": "1pj3145c20r4hnyyrynzmps96a4fpgn408lrl6b9bs79y33c6zwv", - "depends": ["raster", "Rcpp", "sf"] + "depends": ["Rcpp", "raster", "sf"] }, "exampletestr": { "name": "exampletestr", - "version": "1.7.1", - "sha256": "06vyrb6zhzmiwbiwgzjfgzzf04fznjqv5fpfgf06ir1p0wjgrnk6", + "version": "1.7.2", + "sha256": "1npsvx9ibg0v4v1pw89jk46sg1rqj58yxjgramz3rjf9d9dp9x61", "depends": ["checkmate", "fs", "magrittr", "purrr", "readr", "rlang", "roxygen2", "rstudioapi", "strex", "stringr", "styler", "usethis", "withr"] }, "exams": { "name": "exams", - "version": "2.4-0", - "sha256": "0g2m51i7lf62hy4v9ns3l7bv3jh367fwi6hgz94iw7n8pjhkh47v", + "version": "2.4-1", + "sha256": "1ld2j22kxgbx3d9nmhzb0cnmb5a1pz1skx6y87i6ifmjhm1ib78q", "depends": ["base64enc", "knitr", "rmarkdown"] }, + "exams_forge": { + "name": "exams.forge", + "version": "1.0.10", + "sha256": "0kj6c26nhzvwqdfc61hfssq8mwm665ay0p4ycn1161d3ixm7p9j9", + "depends": ["MASS", "base64enc", "exams", "extraDistr", "knitr", "magrittr", "polynom", "psych", "rjson", "rstudioapi", "spelling", "stranslate", "stringdist", "stringr", "tinytex", "xml2", "xtable", "yaml"] + }, "exams_mylearn": { "name": "exams.mylearn", "version": "1.4", @@ -59747,19 +60401,19 @@ "name": "excursions", "version": "2.5.8", "sha256": "0mirg44xhrb7h30blnb4hdfl5h96k5v28ll1awajrjmnrgwssx6a", - "depends": ["fmesher", "Matrix", "sp", "withr"] + "depends": ["Matrix", "fmesher", "sp", "withr"] }, "exdex": { "name": "exdex", "version": "1.2.3", "sha256": "1vmbk52gxay0604jqmiqgm5zffnx1x5f5x3k0dajyxn3qlvqqrp6", - "depends": ["chandwich", "Rcpp", "RcppArmadillo", "RcppRoll"] + "depends": ["Rcpp", "RcppArmadillo", "RcppRoll", "chandwich"] }, "exdqlm": { "name": "exdqlm", "version": "0.1.3", "sha256": "1mflapsbi67jabimqbysr0rcgi8bvn05sgmf5ykr9hmvhs16pf0x", - "depends": ["brms", "coda", "crch", "dlm", "FNN", "GeneralizedHyperbolic", "HyperbolicDist", "LaplacesDemon", "magic", "tictoc", "truncnorm"] + "depends": ["FNN", "GeneralizedHyperbolic", "HyperbolicDist", "LaplacesDemon", "brms", "coda", "crch", "dlm", "magic", "tictoc", "truncnorm"] }, "executablePackeR": { "name": "executablePackeR", @@ -59781,21 +60435,21 @@ }, "exiftoolr": { "name": "exiftoolr", - "version": "0.2.4", - "sha256": "0ybxz6dw7kmd1638kp5qllfczdcpz9r06da1jqww4gfz4rw7q821", + "version": "0.2.6", + "sha256": "05gdmyn01br93smw5gxc0jvfhrr9x2ly0jbfrcfvf3r2bw3kjwnr", "depends": ["backports", "curl", "data_table", "jsonlite", "zip"] }, "expDB": { "name": "expDB", "version": "0.1.0", "sha256": "0h7f9127vrd45lg7k0bkgq3cghxwv2z11p4pak20pakk13g82hj4", - "depends": ["DBI", "dplyr", "lubridate", "magrittr", "png", "readxl", "reshape2", "rlang", "RSQLite", "stringr", "tibble", "tidyr", "tidyverse", "weaana"] + "depends": ["DBI", "RSQLite", "dplyr", "lubridate", "magrittr", "png", "readxl", "reshape2", "rlang", "stringr", "tibble", "tidyr", "tidyverse", "weaana"] }, "expSBM": { "name": "expSBM", "version": "1.3.5", "sha256": "0k8nkwqrcmmhv0x8a2np1rm5cyc9glyvndwdbnp03v0wrg8121sw", - "depends": ["blockmodels", "gtools", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "blockmodels", "gtools", "mclust"] }, "expandFunctions": { "name": "expandFunctions", @@ -59807,7 +60461,7 @@ "name": "expectreg", "version": "0.53", "sha256": "0g5py2096dyrcnvgmmba6g796ky150xk63ny6h6ylmajqfcypm1a", - "depends": ["BayesX", "colorspace", "fields", "Matrix", "mboost", "quadprog", "Rcpp", "RcppEigen"] + "depends": ["BayesX", "Matrix", "Rcpp", "RcppEigen", "colorspace", "fields", "mboost", "quadprog"] }, "experDesign": { "name": "experDesign", @@ -59825,7 +60479,7 @@ "name": "experiment", "version": "1.2.1", "sha256": "0lzxwpcz7m4wngfw0wyazkhh4icn9zjd8jmgf6ym2zzk3xc4dji1", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "experimentr": { "name": "experimentr", @@ -59855,19 +60509,19 @@ "name": "explor", "version": "0.3.10", "sha256": "102rjnllk5xxsik42dd8m1rryz5y2h2dwmidy2jy3zlylgc4dhdr", - "depends": ["dplyr", "DT", "formatR", "ggplot2", "highr", "RColorBrewer", "scatterD3", "shiny", "tidyr"] + "depends": ["DT", "RColorBrewer", "dplyr", "formatR", "ggplot2", "highr", "scatterD3", "shiny", "tidyr"] }, "exploratory": { "name": "exploratory", "version": "0.3.31", "sha256": "0m8visp57v2bgfbi3n6ywz2z7djd6bnd19hcz0jl2fjw9w5sw3hy", - "depends": ["data_table", "DT", "ggplot2", "ggridges", "lemon", "lm_beta", "mediation", "remotes", "shiny", "shinydashboard", "weights"] + "depends": ["DT", "data_table", "ggplot2", "ggridges", "lemon", "lm_beta", "mediation", "remotes", "shiny", "shinydashboard", "weights"] }, "explore": { "name": "explore", "version": "1.3.1", "sha256": "0ays8gj7ba5rdih2hszgfz0asxsmx2jxna1cxv2ahni8rjr3h632", - "depends": ["cli", "dplyr", "DT", "forcats", "ggplot2", "gridExtra", "magrittr", "palmerpenguins", "plotly", "rlang", "rmarkdown", "rpart", "rpart_plot", "shiny", "stringr", "tibble"] + "depends": ["DT", "cli", "dplyr", "forcats", "ggplot2", "gridExtra", "magrittr", "palmerpenguins", "plotly", "rlang", "rmarkdown", "rpart", "rpart_plot", "shiny", "stringr", "tibble"] }, "exploreR": { "name": "exploreR", @@ -59891,7 +60545,7 @@ "name": "expowo", "version": "2.0", "sha256": "08w64l73vc83dk7himn7sr487ivjhn5cgql8vqw30vdksxz3nyi5", - "depends": ["cowplot", "data_table", "dplyr", "flora", "ggplot2", "magrittr", "plyr", "PupillometryR", "R_utils", "RColorBrewer", "rnaturalearth", "scales", "sf", "sp", "tibble", "viridisLite"] + "depends": ["PupillometryR", "RColorBrewer", "R_utils", "cowplot", "data_table", "dplyr", "flora", "ggplot2", "magrittr", "plyr", "rnaturalearth", "scales", "sf", "sp", "tibble", "viridisLite"] }, "expperm": { "name": "expperm", @@ -59927,7 +60581,7 @@ "name": "extBatchMarking", "version": "1.0.1", "sha256": "0ls0h5zfnd5k4r90adzpq39l5lmb6k1nb90d58c4mfzfnms2zhji", - "depends": ["doParallel", "foreach", "optimbase", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "optimbase"] }, "extRC": { "name": "extRC", @@ -59945,7 +60599,7 @@ "name": "extRemes", "version": "2.1-4", "sha256": "12mphdq9zi0r07x3gpj5dg4687hwnjx42d9a392rjbbsgvv2r96f", - "depends": ["distillery", "Lmoments"] + "depends": ["Lmoments", "distillery"] }, "extendedFamily": { "name": "extendedFamily", @@ -59975,7 +60629,7 @@ "name": "extrafont", "version": "0.19", "sha256": "13dbrlf54nbyfz3z2snz7x4m6rfnnhk2l8kkwpgcagzi5lar13sf", - "depends": ["extrafontdb", "Rttf2pt1"] + "depends": ["Rttf2pt1", "extrafontdb"] }, "extrafontdb": { "name": "extrafontdb", @@ -60017,7 +60671,7 @@ "name": "extremeStat", "version": "1.5.9", "sha256": "19ayk8nx6yb14mhgglhy3mq606mm17r3is0x6apxqic7vadvmiqg", - "depends": ["berryFunctions", "evd", "evir", "extRemes", "fExtremes", "ismev", "lmomco", "pbapply", "RColorBrewer", "Renext"] + "depends": ["RColorBrewer", "Renext", "berryFunctions", "evd", "evir", "extRemes", "fExtremes", "ismev", "lmomco", "pbapply"] }, "extremefit": { "name": "extremefit", @@ -60035,19 +60689,19 @@ "name": "extremis", "version": "1.2.1", "sha256": "11y3cb5z6vsrpdffdr44afz3is0ikxvpb81a8pwc7p8q63rxq4a2", - "depends": ["emplik", "evd", "MASS"] + "depends": ["MASS", "emplik", "evd"] }, "extremogram": { "name": "extremogram", "version": "1.0.2", "sha256": "13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "exuber": { "name": "exuber", "version": "1.0.2", "sha256": "1r3hb4nlaph1a2s0dmd1n22ax9xgmdrg75w2xlbf8v1j3ifamvl9", - "depends": ["cli", "doRNG", "doSNOW", "dplyr", "foreach", "generics", "ggplot2", "glue", "lubridate", "progress", "purrr", "Rcpp", "RcppArmadillo", "rlang", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "cli", "doRNG", "doSNOW", "dplyr", "foreach", "generics", "ggplot2", "glue", "lubridate", "progress", "purrr", "rlang", "tibble", "tidyr"] }, "exvatools": { "name": "exvatools", @@ -60083,7 +60737,7 @@ "name": "eyelinkReader", "version": "1.0.1", "sha256": "0gbppd017dc93g3z3b9l885rr1r470jh7gvi89hd7nn5asba5zgz", - "depends": ["dplyr", "fs", "ggplot2", "Rcpp", "RcppProgress", "rlang", "stringr", "tidyr"] + "depends": ["Rcpp", "RcppProgress", "dplyr", "fs", "ggplot2", "rlang", "stringr", "tidyr"] }, "eyelinker": { "name": "eyelinker", @@ -60101,7 +60755,7 @@ "name": "ez", "version": "4.4-0", "sha256": "0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq", - "depends": ["car", "ggplot2", "lme4", "MASS", "Matrix", "mgcv", "plyr", "reshape2", "scales", "stringr"] + "depends": ["MASS", "Matrix", "car", "ggplot2", "lme4", "mgcv", "plyr", "reshape2", "scales", "stringr"] }, "ez_combat": { "name": "ez.combat", @@ -60119,7 +60773,7 @@ "name": "ezEDA", "version": "0.1.1", "sha256": "1qcgvcjksdajn2rhv52bgqz3n0lnxynjdx4gwhkgsy29ffa0sq2c", - "depends": ["dplyr", "GGally", "ggplot2", "magrittr", "purrr", "rlang", "scales", "tidyr"] + "depends": ["GGally", "dplyr", "ggplot2", "magrittr", "purrr", "rlang", "scales", "tidyr"] }, "ezcox": { "name": "ezcox", @@ -60137,7 +60791,7 @@ "name": "ezknitr", "version": "0.6.3", "sha256": "07cznigqndqly24lh3jdk3zq1r4xflivgdfhrh7mmhr83lqy1cha", - "depends": ["knitr", "markdown", "R_utils"] + "depends": ["R_utils", "knitr", "markdown"] }, "ezmmek": { "name": "ezmmek", @@ -60155,7 +60809,7 @@ "name": "ezr", "version": "0.1.5", "sha256": "0r4zq0864xpnmczg1zpaasi348j1fllrn0rqfa5fmjh245chcpd4", - "depends": ["data_table", "DT", "ggplot2", "ggridges", "moments", "shiny", "shinydashboard", "weights"] + "depends": ["DT", "data_table", "ggplot2", "ggridges", "moments", "shiny", "shinydashboard", "weights"] }, "f1dataR": { "name": "f1dataR", @@ -60173,13 +60827,13 @@ "name": "fAssets", "version": "4023.85", "sha256": "1yrs3mfq8ym5pdmf6236xwnc8176z7j36f2bzrrwdfp7kz2gq0id", - "depends": ["ecodist", "energy", "fBasics", "fMultivar", "MASS", "mvnormtest", "robustbase", "sn", "timeDate", "timeSeries"] + "depends": ["MASS", "ecodist", "energy", "fBasics", "fMultivar", "mvnormtest", "robustbase", "sn", "timeDate", "timeSeries"] }, "fBasics": { "name": "fBasics", "version": "4032.96", "sha256": "14461d6ac8hcn1x3srh45a4s5imafqb0xy8bn5l6d0qwhw4njmg1", - "depends": ["gss", "MASS", "spatial", "stabledist", "timeDate", "timeSeries"] + "depends": ["MASS", "gss", "spatial", "stabledist", "timeDate", "timeSeries"] }, "fBonds": { "name": "fBonds", @@ -60197,7 +60851,7 @@ "name": "fDMA", "version": "2.2.7", "sha256": "02710ynd3y13pkbypmqh7lid9g3xn282kxf59yr5p3d76384z0gg", - "depends": ["doParallel", "foreach", "forecast", "gplots", "iterators", "itertools", "png", "psych", "Rcpp", "RcppArmadillo", "tseries", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "forecast", "gplots", "iterators", "itertools", "png", "psych", "tseries", "xts", "zoo"] }, "fExtremes": { "name": "fExtremes", @@ -60209,13 +60863,13 @@ "name": "fGarch", "version": "4033.92", "sha256": "038lcx1sxkldqvmy9y14gmmbkqn4gqzlnff80s11fny004h6hdf8", - "depends": ["cvar", "fastICA", "fBasics", "Matrix", "timeDate", "timeSeries"] + "depends": ["Matrix", "cvar", "fBasics", "fastICA", "timeDate", "timeSeries"] }, "fHMM": { "name": "fHMM", "version": "1.3.1", "sha256": "1ha935ibhz4iicyx3azlk867pkrmj4lrjs1rsyqljf46zd63nfan", - "depends": ["checkmate", "cli", "foreach", "MASS", "oeli", "padr", "pracma", "progress", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "checkmate", "cli", "foreach", "oeli", "padr", "pracma", "progress"] }, "fICA": { "name": "fICA", @@ -60233,7 +60887,7 @@ "name": "fMRIscrub", "version": "0.14.5", "sha256": "1k0ixg82sgngmpbpl2b57lhamm19bfgcxszrwpf5qkvrh83ab3gs", - "depends": ["cellWise", "e1071", "expm", "fMRItools", "gamlss", "MASS", "pesel", "robustbase"] + "depends": ["MASS", "cellWise", "e1071", "expm", "fMRItools", "gamlss", "pesel", "robustbase"] }, "fMRItools": { "name": "fMRItools", @@ -60257,13 +60911,13 @@ "name": "fPASS", "version": "1.0.0", "sha256": "0xrvkcgbzd0xkrxc5p18bhfb5hlf5kxrqyjpy4482bjhr3rr714f", - "depends": ["dplyr", "expm", "face", "gamm4", "gss", "lifecycle", "magrittr", "MASS", "Matrix", "mgcv", "nlme", "purrr", "rlang", "stringr", "testthat"] + "depends": ["MASS", "Matrix", "dplyr", "expm", "face", "gamm4", "gss", "lifecycle", "magrittr", "mgcv", "nlme", "purrr", "rlang", "stringr", "testthat"] }, "fPortfolio": { "name": "fPortfolio", "version": "4023.84", "sha256": "0vk9j8yk2nkz28gb2nh1jrfrqk6n77jm0qfa3j1y65l2rbya0rvg", - "depends": ["fAssets", "fBasics", "fCopulae", "kernlab", "MASS", "quadprog", "Rglpk", "rneos", "robustbase", "Rsolnp", "slam", "timeDate", "timeSeries"] + "depends": ["MASS", "Rglpk", "Rsolnp", "fAssets", "fBasics", "fCopulae", "kernlab", "quadprog", "rneos", "robustbase", "slam", "timeDate", "timeSeries"] }, "fRLR": { "name": "fRLR", @@ -60275,7 +60929,7 @@ "name": "fRegression", "version": "4021.83", "sha256": "12xwq90rch8s8jk3m4ckk6bxjf5phwx8hjwxjdsk2r07afvfc2zi", - "depends": ["fBasics", "lmtest", "MASS", "mgcv", "nnet", "polspline", "timeDate", "timeSeries"] + "depends": ["MASS", "fBasics", "lmtest", "mgcv", "nnet", "polspline", "timeDate", "timeSeries"] }, "fSRM": { "name": "fSRM", @@ -60305,7 +60959,7 @@ "name": "fabMix", "version": "5.1", "sha256": "12d19qjjrdpihprqjd5x2iirn33rmfkl6i9zcyani7vv6b8cpaxp", - "depends": ["coda", "corrplot", "doParallel", "foreach", "ggplot2", "label_switching", "MASS", "mclust", "mvtnorm", "RColorBrewer", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "RColorBrewer", "Rcpp", "RcppArmadillo", "coda", "corrplot", "doParallel", "foreach", "ggplot2", "label_switching", "mclust", "mvtnorm"] }, "fabPrediction": { "name": "fabPrediction", @@ -60323,13 +60977,13 @@ "name": "fabisearch", "version": "0.0.4.5", "sha256": "0yxmw7d7j3llcfs4d0dn2vv4ajalwz0qxrg7bqgql8dvwrb9jgkh", - "depends": ["doParallel", "doRNG", "foreach", "NMF", "reshape2", "rgl"] + "depends": ["NMF", "doParallel", "doRNG", "foreach", "reshape2", "rgl"] }, "fable": { "name": "fable", "version": "0.3.4", "sha256": "0bzw9c68dpx048ihff9sy40d7aiqdqrspfrfyj9pd1pj3brn3blv", - "depends": ["distributional", "dplyr", "fabletools", "Rcpp", "rlang", "tibble", "tidyr", "tsibble"] + "depends": ["Rcpp", "distributional", "dplyr", "fabletools", "rlang", "tibble", "tidyr", "tsibble"] }, "fable_ata": { "name": "fable.ata", @@ -60341,7 +60995,7 @@ "name": "fable.prophet", "version": "0.1.0", "sha256": "12y2k05plg6d6lgqk6617q6z5m6xz33zdsjh56k86h230qqw68rp", - "depends": ["distributional", "dplyr", "fabletools", "lubridate", "prophet", "Rcpp", "rlang", "tsibble"] + "depends": ["Rcpp", "distributional", "dplyr", "fabletools", "lubridate", "prophet", "rlang", "tsibble"] }, "fableCount": { "name": "fableCount", @@ -60353,7 +61007,7 @@ "name": "fabletools", "version": "0.4.2", "sha256": "12s6x32m9nn6jriy7biqkzp62njbmih6h2hybx5jmcy17pccw5rr", - "depends": ["distributional", "dplyr", "generics", "ggdist", "ggplot2", "lifecycle", "progressr", "R6", "rlang", "scales", "tibble", "tidyr", "tidyselect", "tsibble", "vctrs"] + "depends": ["R6", "distributional", "dplyr", "generics", "ggdist", "ggplot2", "lifecycle", "progressr", "rlang", "scales", "tibble", "tidyr", "tidyselect", "tsibble", "vctrs"] }, "fabricatr": { "name": "fabricatr", @@ -60401,19 +61055,19 @@ "name": "facmodCS", "version": "1.0", "sha256": "1xav9lcjb5wd5h9cqyqn2ra3nxd60kq54g1vgmgfbvpmdj7hvrks", - "depends": ["data_table", "lattice", "PerformanceAnalytics", "RobStatTM", "robustbase", "sn", "tseries", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "RobStatTM", "data_table", "lattice", "robustbase", "sn", "tseries", "xts", "zoo"] }, "facmodTS": { "name": "facmodTS", "version": "1.0", "sha256": "1c58w3my7zxcx04h8b284999r3jkd6l0sgwdzkjrkzm42lzw0dhm", - "depends": ["boot", "corpcor", "data_table", "lars", "lattice", "leaps", "PerformanceAnalytics", "PortfolioAnalytics", "quadprog", "R_cache", "RobStatTM", "robustbase", "sandwich", "sn", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "PortfolioAnalytics", "R_cache", "RobStatTM", "boot", "corpcor", "data_table", "lars", "lattice", "leaps", "quadprog", "robustbase", "sandwich", "sn", "xts", "zoo"] }, "factReg": { "name": "factReg", "version": "1.0.0", "sha256": "06m3ir145342lyqdp25fbcg8s4cdbg2xh4dl1291hfx2pd6zxgsz", - "depends": ["glmnet", "mathjaxr", "Matrix", "rrBLUP"] + "depends": ["Matrix", "glmnet", "mathjaxr", "rrBLUP"] }, "factiv": { "name": "factiv", @@ -60425,7 +61079,7 @@ "name": "factoextra", "version": "1.0.7", "sha256": "1allvdjhd3pq8xz30b1cymwcik5iaahghrjrlnn54cwkfhfg0kv2", - "depends": ["abind", "cluster", "dendextend", "FactoMineR", "ggplot2", "ggpubr", "ggrepel", "reshape2", "tidyr"] + "depends": ["FactoMineR", "abind", "cluster", "dendextend", "ggplot2", "ggpubr", "ggrepel", "reshape2", "tidyr"] }, "factoptd": { "name": "factoptd", @@ -60437,7 +61091,7 @@ "name": "factor.switching", "version": "1.4", "sha256": "1w1diks1ar4nncfz8in7h9vdndsadnanqamxahsbx3d2fjga5vh2", - "depends": ["coda", "HDInterval", "lpSolve", "MCMCpack"] + "depends": ["HDInterval", "MCMCpack", "coda", "lpSolve"] }, "factor256": { "name": "factor256", @@ -60467,7 +61121,7 @@ "name": "factorstochvol", "version": "1.1.0", "sha256": "15ki0kaqam97zlm0mgl8pf2swrcqw46d5816aavwmn6jw2banksm", - "depends": ["corrplot", "GIGrvg", "Rcpp", "RcppArmadillo", "stochvol"] + "depends": ["GIGrvg", "Rcpp", "RcppArmadillo", "corrplot", "stochvol"] }, "factory": { "name": "factory", @@ -60479,7 +61133,7 @@ "name": "factset.analyticsapi.engines", "version": "3.0.1", "sha256": "0v96z837dii1q7mbpd48zwpl2qjzqnhignb80g0xkc4iygsnrrms", - "depends": ["caTools", "httr", "jsonlite", "R6", "rlang"] + "depends": ["R6", "caTools", "httr", "jsonlite", "rlang"] }, "factset_protobuf_stach_v2": { "name": "factset.protobuf.stach.v2", @@ -60491,18 +61145,18 @@ "name": "factset.protobuf.stachextensions", "version": "1.0.4", "sha256": "1bs39wylva1zpa8m3b0sdrdszqqxszl1rlwyli400a9zcm7xpwvq", - "depends": ["jsonlite", "R6", "stringr"] + "depends": ["R6", "jsonlite", "stringr"] }, "fad": { "name": "fad", "version": "0.9-1", "sha256": "19j8n13r50sc1srpi4vj58h15yp89im2x7ga5323rmwklx1yj6zg", - "depends": ["Matrix", "Rcpp", "RcppEigen", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppEigen"] }, "faersquarterlydata": { "name": "faersquarterlydata", - "version": "1.1.0", - "sha256": "0qld9d56qwcs6xh1248b7ssarwfqk8rvipiflzhpcy5fb4gzh43i", + "version": "1.2.0", + "sha256": "1qh96k0jkx75707jx7r6cqfj8xskp5vqgqkki3riarz31m6fhznf", "depends": ["data_table", "dplyr", "stringr", "tableone", "tibble", "tidyr", "xml2"] }, "fail": { @@ -60545,13 +61199,13 @@ "name": "fake", "version": "1.4.0", "sha256": "1w852a5ywybsdyvlll2dvrj17isjmiwjwhi43vml7j1k0lv9m86v", - "depends": ["huge", "igraph", "MASS", "Rdpack", "withr"] + "depends": ["MASS", "Rdpack", "huge", "igraph", "withr"] }, "fakemake": { "name": "fakemake", "version": "1.11.1", "sha256": "1ykav6z3pm54zrp7afkxlfidx9bgdjslzsnjzbx6vl7r479z6ql7", - "depends": ["fritools", "igraph", "MakefileR"] + "depends": ["MakefileR", "fritools", "igraph"] }, "fakir": { "name": "fakir", @@ -60587,7 +61241,7 @@ "name": "famSKATRC", "version": "1.1.0", "sha256": "1xbh0by4sjxrmy00v1svcj3lb98p9krpncbhpjbli1jd2p47yk60", - "depends": ["bdsmatrix", "CompQuadForm", "coxme", "kinship2"] + "depends": ["CompQuadForm", "bdsmatrix", "coxme", "kinship2"] }, "familial": { "name": "familial", @@ -60605,7 +61259,7 @@ "name": "fanc", "version": "2.3.11", "sha256": "0lvzp18r5facwbbvjf00zgrlzhr4dp8f6f87fmy04dgqwj7pzwhh", - "depends": ["ellipse", "Matrix"] + "depends": ["Matrix", "ellipse"] }, "fancycut": { "name": "fancycut", @@ -60641,13 +61295,13 @@ "name": "fanyi", "version": "0.0.7", "sha256": "1wl5sgnk154ivmnwdmp7bqm3q30rplc1c2gqfj3w3g3wlnzalvaa", - "depends": ["digest", "ggfun", "httr2", "jsonlite", "openssl", "purrr", "rentrez", "rlang", "SSEparser", "uuid", "yulab_utils"] + "depends": ["SSEparser", "digest", "ggfun", "httr2", "jsonlite", "openssl", "purrr", "rentrez", "rlang", "uuid", "yulab_utils"] }, "faoutlier": { "name": "faoutlier", "version": "0.7.6", "sha256": "0dd8k5s0yv047p10jisqz13nflby4y0dg97r0nbjygzcq1ryx2bs", - "depends": ["lattice", "lavaan", "MASS", "mirt", "mvtnorm", "pbapply", "sem"] + "depends": ["MASS", "lattice", "lavaan", "mirt", "mvtnorm", "pbapply", "sem"] }, "faq": { "name": "faq", @@ -60683,7 +61337,7 @@ "name": "farrell", "version": "0.2.1", "sha256": "0i546w5p40j9wqiq7qvbxw0426msavbdpnh258jcg6bagc6bywh8", - "depends": ["Benchmarking", "data_table", "dplyr", "DT", "magrittr", "miniUI", "readr", "rlang", "shiny", "shinycssloaders", "shinyWidgets", "tibble"] + "depends": ["Benchmarking", "DT", "data_table", "dplyr", "magrittr", "miniUI", "readr", "rlang", "shiny", "shinyWidgets", "shinycssloaders", "tibble"] }, "farver": { "name": "farver", @@ -60713,7 +61367,7 @@ "name": "fasstr", "version": "0.5.2", "sha256": "1r2xgxzzjc78d5grlpapc52b11qw0d01c1fahcvfccxjby51dywx", - "depends": ["dplyr", "e1071", "fitdistrplus", "ggplot2", "lubridate", "openxlsx", "PearsonDS", "plyr", "purrr", "RcppRoll", "scales", "tidyhydat", "tidyr", "zyp"] + "depends": ["PearsonDS", "RcppRoll", "dplyr", "e1071", "fitdistrplus", "ggplot2", "lubridate", "openxlsx", "plyr", "purrr", "scales", "tidyhydat", "tidyr", "zyp"] }, "fastAFT": { "name": "fastAFT", @@ -60723,15 +61377,15 @@ }, "fastDummies": { "name": "fastDummies", - "version": "1.7.3", - "sha256": "0sm02pxbabckxpi3mn36h5bz2wx5pyx7a1dhc2abc4c7fwpihsng", + "version": "1.7.4", + "sha256": "026xc1wrzgwyhs1h1bdn7yy56mnpr5rr9bkwljpzmhzgcx5lv44m", "depends": ["data_table", "stringr", "tibble"] }, "fastFMM": { "name": "fastFMM", "version": "0.2.0", "sha256": "1crgl5961c0k1bq4d3xsl38hrwi3cayf1lj7pprbvdd1y3nyvz8b", - "depends": ["cAIC4", "dplyr", "ggplot2", "gridExtra", "lme4", "lmeresampler", "lsei", "magrittr", "MASS", "Matrix", "mgcv", "mvtnorm", "progress", "refund", "Rfast", "stringr"] + "depends": ["MASS", "Matrix", "Rfast", "cAIC4", "dplyr", "ggplot2", "gridExtra", "lme4", "lmeresampler", "lsei", "magrittr", "mgcv", "mvtnorm", "progress", "refund", "stringr"] }, "fastGHQuad": { "name": "fastGHQuad", @@ -60763,23 +61417,17 @@ "sha256": "1vw9x00gslqgjfz55a60kizz8y02jifgf3fw7dv9lxm207vd2wxq", "depends": ["Rcpp"] }, - "fastLaplace": { - "name": "fastLaplace", - "version": "0.0.2", - "sha256": "172irl97sxkc5m1rk2kxxl8hkb1yf0029k9szkw9qyz0ki8d657w", - "depends": ["bbmle", "fields", "RSpectra"] - }, "fastLink": { "name": "fastLink", "version": "0.6.1", "sha256": "1fjf47c0bpfmrg428p3qgd4m91dpf8500sp758mrp241v5n0lfx9", - "depends": ["adagio", "data_table", "doParallel", "dplyr", "foreach", "gtools", "Matrix", "plotrix", "Rcpp", "RcppArmadillo", "RcppEigen", "stringdist", "stringi", "stringr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "adagio", "data_table", "doParallel", "dplyr", "foreach", "gtools", "plotrix", "stringdist", "stringi", "stringr"] }, "fastLogisticRegressionWrap": { "name": "fastLogisticRegressionWrap", "version": "1.2.0", "sha256": "0vyb43632xhm9g52025ic8b8fmznpidsdwnaraj9vzysrim2v1r6", - "depends": ["checkmate", "MASS", "Rcpp", "RcppEigen", "RcppNumerical"] + "depends": ["MASS", "Rcpp", "RcppEigen", "RcppNumerical", "checkmate"] }, "fastM": { "name": "fastM", @@ -60815,13 +61463,13 @@ "name": "fastRG", "version": "0.3.2", "sha256": "1ig6z8azl2vsl79nfs3s4f9v1f6f27vzc0kxb9zmvkpx3hfnlm7k", - "depends": ["dplyr", "ellipsis", "ggplot2", "glue", "igraph", "Matrix", "RSpectra", "tibble", "tidygraph", "tidyr"] + "depends": ["Matrix", "RSpectra", "dplyr", "ellipsis", "ggplot2", "glue", "igraph", "tibble", "tidygraph", "tidyr"] }, "fastRhockey": { "name": "fastRhockey", "version": "0.4.0", "sha256": "1xw4ylrsf9wylym79svazrmw2c9fmqk8n0sz1vypsm29dsic879k", - "depends": ["cli", "data_table", "dplyr", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "Rcpp", "RcppParallel", "rlang", "rvest", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppParallel", "cli", "data_table", "dplyr", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "rlang", "rvest", "stringr", "tibble", "tidyr"] }, "fastSOM": { "name": "fastSOM", @@ -60833,13 +61481,13 @@ "name": "fastTS", "version": "1.0.1", "sha256": "16icpdhrqx34q189iqkdpbxd95lhvsb39z4xz2b3lq80pbcri0i0", - "depends": ["dplyr", "ncvreg", "RcppRoll", "rlang", "yardstick"] + "depends": ["RcppRoll", "dplyr", "ncvreg", "rlang", "yardstick"] }, "fastText": { "name": "fastText", "version": "1.0.4", "sha256": "1mrdiqj8pplyygsga1plx8b731i915lzjxhzslkbz6qk2jrj7632", - "depends": ["data_table", "ggplot2", "glue", "Rcpp"] + "depends": ["Rcpp", "data_table", "ggplot2", "glue"] }, "fastTextR": { "name": "fastTextR", @@ -60849,9 +61497,9 @@ }, "fastTopics": { "name": "fastTopics", - "version": "0.6-163", - "sha256": "1nir53ich0xkpclrw34ry4mwih9s4vr7qv8xy6511ny43awznikm", - "depends": ["ashr", "cowplot", "dplyr", "ggplot2", "ggrepel", "gtools", "htmlwidgets", "irlba", "Matrix", "pbapply", "plotly", "progress", "quadprog", "Rcpp", "RcppArmadillo", "RcppParallel", "Rtsne", "uwot"] + "version": "0.6-192", + "sha256": "17dydlgwzdd4n0d4xjz64z8w4vrmrfn3lqx128840x7zvgg0kg38", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "RhpcBLASctl", "Rtsne", "ashr", "cowplot", "dplyr", "ggplot2", "ggrepel", "gtools", "htmlwidgets", "irlba", "pbapply", "plotly", "progress", "quadprog", "uwot"] }, "fastWavelets": { "name": "fastWavelets", @@ -60869,7 +61517,7 @@ "name": "fastadi", "version": "0.1.1", "sha256": "1hvi430ws1yzw10fp4z177wc1bnj11pxmvjsbmx0p54bcbb3a32a", - "depends": ["ellipsis", "glue", "logger", "LRMF3", "Matrix", "Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["LRMF3", "Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "ellipsis", "glue", "logger"] }, "fastai": { "name": "fastai", @@ -60899,13 +61547,13 @@ "name": "fastcmh", "version": "0.2.7", "sha256": "0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl", - "depends": ["bindata", "Rcpp"] + "depends": ["Rcpp", "bindata"] }, "fastcmprsk": { "name": "fastcmprsk", "version": "1.24.5", "sha256": "1ymg79y913h4s55h1pbmbx0hx40khc0mq6348awzqjy8pjhz1mdl", - "depends": ["dynpred", "foreach", "Matrix", "survival"] + "depends": ["Matrix", "dynpred", "foreach", "survival"] }, "fastcox": { "name": "fastcox", @@ -60917,7 +61565,7 @@ "name": "fastcpd", "version": "0.14.3", "sha256": "0b5xlx80nlbmkp8h4rnz0367zxn2hlwpcb4zid5jq3q32rv8r6sz", - "depends": ["fastglm", "forecast", "glmnet", "Matrix", "progress", "Rcpp", "RcppArmadillo", "RcppClock", "testthat", "tseries"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppClock", "fastglm", "forecast", "glmnet", "progress", "testthat", "tseries"] }, "fastdigest": { "name": "fastdigest", @@ -60935,19 +61583,19 @@ "name": "fasterize", "version": "1.0.5", "sha256": "1d63q77hfbn2ly8cwsik4gaavdhidpi7idf7qj2y5bi9xhd10kyl", - "depends": ["raster", "Rcpp", "RcppArmadillo", "wk"] + "depends": ["Rcpp", "RcppArmadillo", "raster", "wk"] }, "fastglm": { "name": "fastglm", "version": "0.0.3", "sha256": "0283kgk81cxbii7ljmp1rzqg5mzkvf7cj7lflhhhkgj5ljqina2i", - "depends": ["BH", "bigmemory", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "bigmemory"] }, "fastglmpca": { "name": "fastglmpca", "version": "0.1-103", "sha256": "1yzk91g9aszazfm4gp70wfs21dbdi9dxlh95ylh839pivs78cvrc", - "depends": ["daarem", "distr", "Matrix", "MatrixExtra", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Matrix", "MatrixExtra", "Rcpp", "RcppArmadillo", "RcppParallel", "daarem", "distr"] }, "fastkmedoids": { "name": "fastkmedoids", @@ -60959,7 +61607,7 @@ "name": "fastkqr", "version": "1.0.0", "sha256": "18zawflm5fam28y8f5ygf26nmi5if3h765grb5skkzibxnmpxdff", - "depends": ["dotCall64", "MASS", "Matrix", "rlang"] + "depends": ["MASS", "Matrix", "dotCall64", "rlang"] }, "fastliu": { "name": "fastliu", @@ -61007,7 +61655,7 @@ "name": "fastpos", "version": "0.5.1", "sha256": "0a55fydlcn2h27vizv4w3gma26v2a32li81x09hvk519yfy8ph1k", - "depends": ["lifecycle", "MASS", "pbmcapply", "plyr", "Rcpp", "RcppArmadillo", "RcppProgress", "tibble"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppProgress", "lifecycle", "pbmcapply", "plyr", "tibble"] }, "fastqcr": { "name": "fastqcr", @@ -61037,7 +61685,7 @@ "name": "fastshap", "version": "0.1.1", "sha256": "1j6bnkv4q8n85xlvzm5p6p4yg8wdp6an6skbvdif5g9c376hzqb2", - "depends": ["foreach", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "foreach"] }, "fasttime": { "name": "fasttime", @@ -61073,7 +61721,7 @@ "name": "fauxpas", "version": "0.5.2", "sha256": "1xhyws6nr9ayir4sykvhyaf1aprx9rjm2xyb3p5ikd26l5hp7l44", - "depends": ["httpcode", "R6", "whisker"] + "depends": ["R6", "httpcode", "whisker"] }, "faviconPlease": { "name": "faviconPlease", @@ -61091,13 +61739,13 @@ "name": "fbRads", "version": "17.0.0", "sha256": "0kfbd0dc0k72qj5vd1bm11lqi6p61z7fmr8507fsc6ggcr97vw76", - "depends": ["bit64", "data_table", "digest", "jsonlite", "logger", "plyr", "RCurl"] + "depends": ["RCurl", "bit64", "data_table", "digest", "jsonlite", "logger", "plyr"] }, "fbar": { "name": "fbar", "version": "0.6.0", "sha256": "005725xiz6k868hrj12ryq3xlyin2r94n0yychimjzhfsppx2zba", - "depends": ["assertthat", "dplyr", "magrittr", "Matrix", "purrr", "rlang", "ROI", "ROI_plugin_ecos", "stringr", "tibble", "tidyr"] + "depends": ["Matrix", "ROI", "ROI_plugin_ecos", "assertthat", "dplyr", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "fbati": { "name": "fbati", @@ -61109,13 +61757,13 @@ "name": "fbnet", "version": "1.0.3", "sha256": "0jz3jbd2qna4mnas0mjs32wvlk6vzlw61qb9fql65al40401b23x", - "depends": ["assertthat", "igraph", "paramlink", "Rsolnp"] + "depends": ["Rsolnp", "assertthat", "igraph", "paramlink"] }, "fbroc": { "name": "fbroc", "version": "0.4.1", "sha256": "1v73wl3yckcqx43fz1lzcsy6v08vmbmi7yi623yhgqywixxv2bx3", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "fbst": { "name": "fbst", @@ -61139,31 +61787,25 @@ "name": "fcaR", "version": "1.2.2", "sha256": "1vrysvdjqs62hx14kq31jmi2r093k5pcjjbrzvvpdmnllcv1s673", - "depends": ["dplyr", "forcats", "fractional", "ggplot2", "glue", "magrittr", "Matrix", "POSetR", "purrr", "R6", "Rcpp", "registry", "rlang", "settings", "stringr", "tibble", "tidyr", "tikzDevice"] + "depends": ["Matrix", "POSetR", "R6", "Rcpp", "dplyr", "forcats", "fractional", "ggplot2", "glue", "magrittr", "purrr", "registry", "rlang", "settings", "stringr", "tibble", "tidyr", "tikzDevice"] }, "fcci": { "name": "fcci", "version": "1.0.1", "sha256": "02q6q0q7fqdbp20fdf33jbkh0aj9nzl6dwysr0nn146ciz3vqgin", - "depends": ["assertthat", "Rcpp", "rlang"] + "depends": ["Rcpp", "assertthat", "rlang"] }, "fcfdr": { "name": "fcfdr", "version": "1.0.0", "sha256": "16mnpr64x00qwbgq9pw69k941yb0i7mx7ncsilahicprxqyfpfww", - "depends": ["bigsplines", "cowplot", "data_table", "dplyr", "fields", "ggplot2", "hexbin", "Hmisc", "locfdr", "MASS", "polyCub", "spatstat_geom"] + "depends": ["Hmisc", "MASS", "bigsplines", "cowplot", "data_table", "dplyr", "fields", "ggplot2", "hexbin", "locfdr", "polyCub", "spatstat_geom"] }, "fcirt": { "name": "fcirt", "version": "0.1.0", "sha256": "1wiyiz51mkm5kd95xmpvlwng51awpp4y133dd5q88mnafrxyij1h", - "depends": ["BH", "numDeriv", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] - }, - "fcl": { - "name": "fcl", - "version": "0.1.0", - "sha256": "0rskl9q7z5k5q17m3c5w4pdc96m6fdag7nkkjmyyh43wbm4bjb0a", - "depends": ["xts", "ymd"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "numDeriv", "rstan", "rstantools"] }, "fclust": { "name": "fclust", @@ -61211,7 +61853,7 @@ "name": "fdANOVA", "version": "0.1.2", "sha256": "1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1", - "depends": ["doBy", "doParallel", "fda", "foreach", "ggplot2", "magic", "MASS"] + "depends": ["MASS", "doBy", "doParallel", "fda", "foreach", "ggplot2", "magic"] }, "fdWasserstein": { "name": "fdWasserstein", @@ -61229,7 +61871,7 @@ "name": "fda.usc", "version": "2.1.0", "sha256": "1s13zssm7x3hg1k928r5jkjz35bflb1nzz4c7b4xr0x1j8qg3d60", - "depends": ["doParallel", "fda", "foreach", "iterators", "kSamples", "MASS", "mgcv", "nlme"] + "depends": ["MASS", "doParallel", "fda", "foreach", "iterators", "kSamples", "mgcv", "nlme"] }, "fdaACF": { "name": "fdaACF", @@ -61247,43 +61889,43 @@ "name": "fdaMocca", "version": "0.1-1", "sha256": "0y54d8a38d5hjnh8iw2r4zl2d2xz72hjddhxbar91jk6zf3kzpsy", - "depends": ["doParallel", "fda", "foreach", "Matrix", "mvtnorm"] + "depends": ["Matrix", "doParallel", "fda", "foreach", "mvtnorm"] }, "fdaPDE": { "name": "fdaPDE", - "version": "1.1-18", - "sha256": "0l5kv7vwwjbnfq13l74ij860fpp45hgvwqpxfnpqbxdkq2lfymcn", - "depends": ["Matrix", "plot3D", "Rcpp", "RcppEigen", "rgl"] + "version": "1.1-19", + "sha256": "0vd1rhh2ks6s738g4d687v3ndpjvb8lypzfpfqpwbkjzx29g60wn", + "depends": ["Matrix", "Rcpp", "RcppEigen", "plot3D", "rgl"] }, "fdaPOIFD": { "name": "fdaPOIFD", "version": "1.0.3", "sha256": "0c773hidrg69gs9lzdcwf4hzzmid3kwf73pw6c807y1b4lgiai20", - "depends": ["FastGP", "fdapace", "ggplot2", "magrittr", "MASS", "patchwork", "reshape2", "tibble"] + "depends": ["FastGP", "MASS", "fdapace", "ggplot2", "magrittr", "patchwork", "reshape2", "tibble"] }, "fdaSP": { "name": "fdaSP", "version": "1.1.1", "sha256": "1vhnrw2shxnpd2vnqkjq8lqx344p3z488x8wzpkb8hxnxzmfp08w", - "depends": ["doParallel", "foreach", "ks", "pracma", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "doParallel", "foreach", "ks", "pracma"] }, "fdacluster": { "name": "fdacluster", "version": "0.3.0", "sha256": "0mpnhd6qp4hif1sbxv52dyg3yfff8icn8xz7sximcjn00g81p343", - "depends": ["cli", "cluster", "dbscan", "dplyr", "fdasrvf", "forcats", "furrr", "ggplot2", "lpSolve", "nloptr", "progressr", "purrr", "Rcpp", "RcppArmadillo", "rlang", "tibble", "tidyr", "withr"] + "depends": ["Rcpp", "RcppArmadillo", "cli", "cluster", "dbscan", "dplyr", "fdasrvf", "forcats", "furrr", "ggplot2", "lpSolve", "nloptr", "progressr", "purrr", "rlang", "tibble", "tidyr", "withr"] }, "fdaconcur": { "name": "fdaconcur", - "version": "0.1.2", - "sha256": "1ajmm8lrd9lnl8smkjrnnsnfjmb0dnbhrglg1gdcajvr937rhjsa", - "depends": ["fdapace"] + "version": "0.1.3", + "sha256": "1aflg0fc5x0brkz87jhz27xcx8fkimx7g9nsd99j3w9ck2sqrdki", + "depends": ["Rcpp", "RcppEigen", "fdapace"] }, "fdadensity": { "name": "fdadensity", "version": "0.1.2", "sha256": "1i2xzchlsixgjzyfmbv547sy6mq90xrnyc2kpd11wwfgfrpj1ix3", - "depends": ["fdapace", "Rcpp"] + "depends": ["Rcpp", "fdapace"] }, "fdaoutlier": { "name": "fdaoutlier", @@ -61293,27 +61935,27 @@ }, "fdapace": { "name": "fdapace", - "version": "0.5.9", - "sha256": "16j731d7y290xk5qvld59pb78mrch5i61szcf3j79kkirmz6hh8f", - "depends": ["Hmisc", "MASS", "Matrix", "numDeriv", "pracma", "Rcpp", "RcppEigen"] + "version": "0.6.0", + "sha256": "1jrvbln0dcyiagdym60g0dwdhfh43vzyvxwrb8dhk2mbhpc80ghx", + "depends": ["Hmisc", "MASS", "Matrix", "Rcpp", "RcppEigen", "numDeriv", "pracma"] }, "fdapaceShiny": { "name": "fdapaceShiny", "version": "1.0.5", "sha256": "1cy1rcmsyr78q3wqkaw3lvqzlr07n7djrqqpwm3y8xz60fybs8p6", - "depends": ["bs4Dash", "config", "dplyr", "DT", "fdapace", "ggplot2", "golem", "htmltools", "magrittr", "plotly", "purrr", "reshape2", "shiny", "shinyjs", "shinyWidgets", "stringr", "tidyr"] + "depends": ["DT", "bs4Dash", "config", "dplyr", "fdapace", "ggplot2", "golem", "htmltools", "magrittr", "plotly", "purrr", "reshape2", "shiny", "shinyWidgets", "shinyjs", "stringr", "tidyr"] }, "fdarep": { "name": "fdarep", "version": "0.1.1", "sha256": "1y3nj3l4ymaikvjk9jhy0hxhlrv7sjr1vvhf70v38bkwzkxbcwxy", - "depends": ["fdapace", "Hmisc", "MASS", "Matrix", "numDeriv", "pracma", "Rcpp", "RcppEigen"] + "depends": ["Hmisc", "MASS", "Matrix", "Rcpp", "RcppEigen", "fdapace", "numDeriv", "pracma"] }, "fdasrvf": { "name": "fdasrvf", - "version": "2.2.0", - "sha256": "1dkwhb5in9dqw5wh2zx05s8ijk351ln2nr05bfkbymx9rdfrqbg5", - "depends": ["cli", "coda", "doParallel", "fields", "foreach", "lpSolve", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo", "rlang", "tolerance", "viridisLite"] + "version": "2.3.1", + "sha256": "0n6r0j07dhzffa0phnmjwdiqq76m37a8w6aqaa5lvbws5lilvh4n", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "cli", "coda", "doParallel", "fields", "foreach", "lpSolve", "mvtnorm", "rlang", "tolerance", "viridisLite"] }, "fdatest": { "name": "fdatest", @@ -61323,9 +61965,9 @@ }, "fddm": { "name": "fddm", - "version": "0.5-2", - "sha256": "0sh3qnsakl02wpzwhxyqdikn7xx5crh401w3d149ww2jxvagjmsf", - "depends": ["Rcpp"] + "version": "1.0-2", + "sha256": "1nlnn409frlhhc47z33bgxdcix20csl4bk85x4ybhknvdfffyh1a", + "depends": ["Formula", "Rcpp", "RcppEigen"] }, "fdicdata": { "name": "fdicdata", @@ -61337,13 +61979,13 @@ "name": "fdm2id", "version": "0.9.9", "sha256": "09qxjr2svqv1r49s4q5wk1pzm95lxfm1w0pr4a60zv2p9qrljsxk", - "depends": ["arules", "arulesViz", "FactoMineR", "mclust", "nnet", "pls"] + "depends": ["FactoMineR", "arules", "arulesViz", "mclust", "nnet", "pls"] }, "fdq": { "name": "fdq", "version": "0.12", "sha256": "198nsyzv0ni2mjx12wik58c7z5vrc1mfk80k3iv94dz1iq9fprqf", - "depends": ["data_table", "Fgmutils", "ggplot2", "randomcoloR", "sqldf"] + "depends": ["Fgmutils", "data_table", "ggplot2", "randomcoloR", "sqldf"] }, "fdrDiscreteNull": { "name": "fdrDiscreteNull", @@ -61367,7 +62009,7 @@ "name": "fds", "version": "1.8", "sha256": "1284vncixrzrz9x6b52gslrbrbia07sd0xac7nwdqhp5f5v5wfi0", - "depends": ["rainbow", "RCurl"] + "depends": ["RCurl", "rainbow"] }, "fdth": { "name": "fdth", @@ -61385,7 +62027,7 @@ "name": "feather", "version": "0.3.5", "sha256": "1gxd0h2m56sjjlzn4dry6s13nddxc4l5i11gsvavaf2dwbahdzsh", - "depends": ["hms", "Rcpp", "tibble"] + "depends": ["Rcpp", "hms", "tibble"] }, "feature": { "name": "feature", @@ -61439,7 +62081,7 @@ "name": "fect", "version": "1.0.0", "sha256": "1m2ap1ispc2z1qdj341vx1knsjkqfzi6ys4z3hd9bp4g7bi0xsyx", - "depends": ["abind", "doParallel", "doRNG", "fixest", "foreach", "future", "GGally", "ggplot2", "gridExtra", "MASS", "mvtnorm", "panelView", "Rcpp", "RcppArmadillo"] + "depends": ["GGally", "MASS", "Rcpp", "RcppArmadillo", "abind", "doParallel", "doRNG", "fixest", "foreach", "future", "ggplot2", "gridExtra", "mvtnorm", "panelView"] }, "federalregister": { "name": "federalregister", @@ -61451,7 +62093,7 @@ "name": "fedmatch", "version": "2.0.6", "sha256": "06clj31qk6ama56jmd9vpq5h1v7250aixgvaywh5j8fsrp1l7qg2", - "depends": ["BH", "data_table", "forcats", "magrittr", "purrr", "Rcpp", "scales", "SnowballC", "stringdist", "stringr"] + "depends": ["BH", "Rcpp", "SnowballC", "data_table", "forcats", "magrittr", "purrr", "scales", "stringdist", "stringr"] }, "fedregs": { "name": "fedregs", @@ -61475,7 +62117,7 @@ "name": "feisr", "version": "1.3.0", "sha256": "1i89w3n365k4fwgiifb2f68ag11f96rrxqxradrjvbmi7r80md99", - "depends": ["dplyr", "Formula", "plm", "Rdpack"] + "depends": ["Formula", "Rdpack", "dplyr", "plm"] }, "felp": { "name": "felp", @@ -61493,7 +62135,7 @@ "name": "fence", "version": "1.0", "sha256": "18l3fliww60d9n9hbfdny5vr9mi78krwpjj5sypdsb77d6332h9q", - "depends": ["fields", "ggplot2", "lme4", "MASS", "sae", "snow", "snowfall"] + "depends": ["MASS", "fields", "ggplot2", "lme4", "sae", "snow", "snowfall"] }, "fergm": { "name": "fergm", @@ -61509,9 +62151,9 @@ }, "ferrn": { "name": "ferrn", - "version": "0.0.2", - "sha256": "0yxw18yzj5j2fpj4rf9flmmng4s2ldgx4yaywa2hrclbnl43c578", - "depends": ["dplyr", "geozoo", "gganimate", "ggforce", "ggplot2", "ggrepel", "magrittr", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr", "tourr"] + "version": "0.1.0", + "sha256": "1x3vislwcjlcvgd4dinzi6skqgp4ic1mq4srqkwrk1xr90l2wywn", + "depends": ["GpGp", "cli", "dplyr", "gganimate", "ggforce", "ggplot2", "ggrepel", "glue", "magrittr", "progress", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr", "tourr"] }, "fertilmodel": { "name": "fertilmodel", @@ -61553,7 +62195,7 @@ "name": "ffp", "version": "0.2.2", "sha256": "05mzhg2hj51x8588nvwqamvrgd24haxw4mq7qn62zaznvxnwsr3m", - "depends": ["assertthat", "crayon", "dplyr", "forcats", "ggdist", "ggplot2", "lubridate", "magrittr", "mvtnorm", "NlcOptim", "nloptr", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr", "vctrs"] + "depends": ["NlcOptim", "assertthat", "crayon", "dplyr", "forcats", "ggdist", "ggplot2", "lubridate", "magrittr", "mvtnorm", "nloptr", "purrr", "rlang", "scales", "stringr", "tibble", "tidyr", "vctrs"] }, "ffscrapr": { "name": "ffscrapr", @@ -61589,7 +62231,7 @@ "name": "fgeo.analyze", "version": "1.1.14", "sha256": "0pnmvq6imnffvr4qlmygmmw18g33s81f5jrrs7n4ahwi0qmf5qaj", - "depends": ["dplyr", "fgeo_tool", "glue", "lubridate", "magrittr", "MASS", "purrr", "rlang", "tibble", "tidyr", "withr"] + "depends": ["MASS", "dplyr", "fgeo_tool", "glue", "lubridate", "magrittr", "purrr", "rlang", "tibble", "tidyr", "withr"] }, "fgeo_plot": { "name": "fgeo.plot", @@ -61619,13 +62261,13 @@ "name": "fglsnet", "version": "1.0", "sha256": "00qn4k4xm1zfkz77lys468c1mfx3vyfjkf19wdbcvgssrmf6w0xd", - "depends": ["lmtest", "MASS", "Matrix", "matrixcalc", "network", "sandwich", "sna"] + "depends": ["MASS", "Matrix", "lmtest", "matrixcalc", "network", "sandwich", "sna"] }, "fgm": { "name": "fgm", "version": "1.0", "sha256": "0i6lbqxxjq78dql14qwqs7slnn0kyls2g3a9biabny2narwf6n3m", - "depends": ["fdapace", "JGL"] + "depends": ["JGL", "fdapace"] }, "fgui": { "name": "fgui", @@ -61643,7 +62285,7 @@ "name": "fiberLD", "version": "0.1-8", "sha256": "03f6gx8scpvb06im6m1vd5nakr16925504w4n44fwrbkbmmx48kx", - "depends": ["BH", "doParallel", "foreach", "Matrix", "Rcpp", "RcppArmadillo", "VGAM"] + "depends": ["BH", "Matrix", "Rcpp", "RcppArmadillo", "VGAM", "doParallel", "foreach"] }, "fic": { "name": "fic", @@ -61661,19 +62303,19 @@ "name": "fido", "version": "1.1.1", "sha256": "1q46m55y8ni51b96ckc70ap11w6vjq13wivsm8q37aj464845yy4", - "depends": ["BH", "dplyr", "ggplot2", "purrr", "Rcpp", "RcppEigen", "RcppNumerical", "RcppZiggurat", "rlang", "tidybayes", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppNumerical", "RcppZiggurat", "dplyr", "ggplot2", "purrr", "rlang", "tidybayes", "tidyr"] }, "fields": { "name": "fields", - "version": "15.2", - "sha256": "0gdddigzbzlhrbp6h2ma5b05m68pmggrkcd80hzgjbjj64ihy9qz", + "version": "16.2", + "sha256": "1r5kld45dgigbaavcx3c88ci0jd66zxan3fh2wypwvj7sl69a41r", "depends": ["maps", "spam", "viridisLite"] }, "fiery": { "name": "fiery", "version": "1.2.1", "sha256": "127ighz937rgqbg0kiq7wrms7z3r5pf77ixcfa7if35mcv7yrg8s", - "depends": ["cli", "crayon", "future", "glue", "httpuv", "later", "parallelly", "R6", "reqres", "rlang", "stringi", "uuid"] + "depends": ["R6", "cli", "crayon", "future", "glue", "httpuv", "later", "parallelly", "reqres", "rlang", "stringi", "uuid"] }, "fig": { "name": "fig", @@ -61707,15 +62349,15 @@ }, "file2meco": { "name": "file2meco", - "version": "0.7.1", - "sha256": "0ksk7clcya24l3ji4p5k4876d1pg8dwihs7vmlwf8hkp3vqg048b", - "depends": ["ape", "dplyr", "magrittr", "Matrix", "microeco", "rhdf5", "tidyr", "yaml"] + "version": "0.8.0", + "sha256": "15k3yg7kx63bwfj21xa8raca06bcc6sa2n1c0qkw5wz07apqmyvk", + "depends": ["Matrix", "ape", "dplyr", "magrittr", "microeco", "rhdf5", "tidyr", "yaml"] }, "filearray": { "name": "filearray", - "version": "0.1.6", - "sha256": "1xf48fgf70s9h5gjls8625m553lkdbinnz89nxn05l9wakhf5qgv", - "depends": ["BH", "digest", "fastmap", "Rcpp", "uuid"] + "version": "0.1.7", + "sha256": "06f209qvmhpj36xdxiqds5kpvxhac2mr7lci80i4bqik1brxpv17", + "depends": ["BH", "Rcpp", "digest", "fastmap", "uuid"] }, "filebin": { "name": "filebin", @@ -61731,15 +62373,15 @@ }, "filehash": { "name": "filehash", - "version": "2.4-5", - "sha256": "0b52bnsqp65s3r4aw9mvfwfnjmsrqq8ndcadwig547nn9mwy47iv", + "version": "2.4-6", + "sha256": "1cc1xq6vpk5cmsr4w5i6nvkx36grd38dds4lys4gmijlldml92sm", "depends": ["digest"] }, "filehashSQLite": { "name": "filehashSQLite", - "version": "0.2-6", - "sha256": "1758wpzq2h7biwpdlrqhi84k35fbpfpxnji6j79zisr825fqjkpq", - "depends": ["DBI", "filehash", "RSQLite"] + "version": "0.2-7", + "sha256": "1j1n9bsans8zi8fa5shri4k4ra1dmspxd5k9lxr8qjli24na0hhx", + "depends": ["DBI", "RSQLite", "filehash"] }, "filelock": { "name": "filelock", @@ -61771,22 +62413,16 @@ "sha256": "0p5vgrzbvipja9lgarygqphnr1z8vy9kl9n83jnfyvf0gp4ansl2", "depends": ["checkmate", "magrittr", "purrr", "rlang", "strex", "stringi", "stringr", "withr"] }, - "filibustr": { - "name": "filibustr", - "version": "0.2.1", - "sha256": "1q7307fwwrvpgf0ypkhs4ayg4m27vpf3kazsvnf73jk3gi33i0ki", - "depends": ["crul", "dplyr", "haven", "httr2", "lifecycle", "R_utils", "readr", "rlang", "rvest", "stringr", "tidyr", "tidyselect"] - }, "filling": { "name": "filling", "version": "0.2.3", "sha256": "17vk0pndsc8xhgp4zy5dfyc36pzk2hm5zk6xijdy4xaf7k5j4wls", - "depends": ["CVXR", "nabor", "Rcpp", "RcppArmadillo", "Rdpack", "ROptSpace", "RSpectra"] + "depends": ["CVXR", "ROptSpace", "RSpectra", "Rcpp", "RcppArmadillo", "Rdpack", "nabor"] }, "fillpattern": { "name": "fillpattern", - "version": "1.0.1", - "sha256": "0xysrb3yzvlag9zpsq7hhqqyrhwapnzc66d636wvxpsi4r50lp0w", + "version": "1.0.2", + "sha256": "0qwrzxjw4br9sbh0zxry72j6rgvb1s8cwvwqigf7dg1zi4hk4i74", "depends": ["ggplot2"] }, "fillr": { @@ -61799,7 +62435,7 @@ "name": "filterNHP", "version": "0.1.2", "sha256": "0kk6548nr5786ywa83v8by4c1n7ljh9sy4fshpfqizp49fv9zv22", - "depends": ["data_tree", "rclipboard", "shiny", "shinyBS", "shinyjs", "shinyWidgets"] + "depends": ["data_tree", "rclipboard", "shiny", "shinyBS", "shinyWidgets", "shinyjs"] }, "filters": { "name": "filters", @@ -61809,20 +62445,20 @@ }, "finalfit": { "name": "finalfit", - "version": "1.0.7", - "sha256": "04nskvkqd999wjxy7lkanrd4iyfn8xljagyafw1ai7mfiqxgmfag", - "depends": ["bdsmatrix", "boot", "broom", "dplyr", "forcats", "GGally", "ggplot2", "gridExtra", "lme4", "magrittr", "mice", "pillar", "pROC", "purrr", "scales", "stringr", "survival", "tidyr", "tidyselect"] + "version": "1.0.8", + "sha256": "0g0vrzdr0f591q0sh0an0rvbvss05cp5hghbh9jmcprlr018wbm4", + "depends": ["GGally", "bdsmatrix", "boot", "broom", "dplyr", "forcats", "ggplot2", "gridExtra", "lme4", "magrittr", "mice", "pROC", "pillar", "purrr", "scales", "stringr", "survival", "tidyr"] }, "finalsize": { "name": "finalsize", "version": "0.2.1", "sha256": "0sv174v36clz4blvk4d33rkg7w6ylf4a5j4q057z81kkdd0jr042", - "depends": ["checkmate", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "checkmate"] }, "finbif": { "name": "finbif", - "version": "0.9.6", - "sha256": "08vbs7s0d873033sw5nc3x6hmi21yvz0lvg4zcbv2ii40napwjsx", + "version": "0.9.7", + "sha256": "15bys4amh2hw6sz3bby61lrw6m1nb8jwrnz0m47cmlcz770acsaz", "depends": ["digest", "httr", "lutz"] }, "finbipartite": { @@ -61835,13 +62471,13 @@ "name": "finch", "version": "0.4.0", "sha256": "0q7riaxms460c6z2gb8i0q4pb348bnvry46bjd7pb9mh8fnl1i8b", - "depends": ["data_table", "digest", "EML", "hoardr", "xml2"] + "depends": ["EML", "data_table", "digest", "hoardr", "xml2"] }, "findGSEP": { "name": "findGSEP", "version": "1.2.0", "sha256": "0j1m54y46ls3s4097028lf7nj4i8xbfpbxhprqy88j886xwfq56x", - "depends": ["dplyr", "ggplot2", "pracma", "RColorBrewer", "scales"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "pracma", "scales"] }, "findInFiles": { "name": "findInFiles", @@ -61895,7 +62531,7 @@ "name": "fingerPro", "version": "1.1", "sha256": "1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68", - "depends": ["car", "GGally", "ggplot2", "gridExtra", "klaR", "MASS", "plyr", "Rcmdr", "Rcpp", "RcppGSL", "RcppProgress", "reshape", "rgl", "scales"] + "depends": ["GGally", "MASS", "Rcmdr", "Rcpp", "RcppGSL", "RcppProgress", "car", "ggplot2", "gridExtra", "klaR", "plyr", "reshape", "rgl", "scales"] }, "fingerprint": { "name": "fingerprint", @@ -61931,19 +62567,19 @@ "name": "finnsurveytext", "version": "1.0.0", "sha256": "0hi0b6i37lpfs2xhb0k1qdlm91mils1kl2dl9gz3qx5hz8f9342s", - "depends": ["dplyr", "ggplot2", "ggpubr", "ggraph", "gridExtra", "igraph", "magrittr", "RColorBrewer", "stopwords", "stringr", "textrank", "tibble", "tidyr", "udpipe", "wordcloud"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggpubr", "ggraph", "gridExtra", "igraph", "magrittr", "stopwords", "stringr", "textrank", "tibble", "tidyr", "udpipe", "wordcloud"] }, "finnts": { "name": "finnts", "version": "0.4.0", "sha256": "1cx9kl6dzkmrxb4i7vlkligx5p1q2jxinybmi1367hlpgafhv6js", - "depends": ["cli", "Cubist", "dials", "digest", "doParallel", "dplyr", "earth", "feasts", "foreach", "fs", "generics", "glmnet", "glue", "gtools", "hts", "kernlab", "lubridate", "magrittr", "modeltime", "parsnip", "plyr", "purrr", "recipes", "rsample", "rules", "snakecase", "stringr", "tibble", "tidyr", "tidyselect", "timetk", "tune", "vroom", "workflows"] + "depends": ["Cubist", "cli", "dials", "digest", "doParallel", "dplyr", "earth", "feasts", "foreach", "fs", "generics", "glmnet", "glue", "gtools", "hts", "kernlab", "lubridate", "magrittr", "modeltime", "parsnip", "plyr", "purrr", "recipes", "rsample", "rules", "snakecase", "stringr", "tibble", "tidyr", "tidyselect", "timetk", "tune", "vroom", "workflows"] }, "finreportr": { "name": "finreportr", "version": "1.0.4", "sha256": "145idg2c6qmqp29afalnhxxzky08j21dmm05mp3zf63aq9mq41d4", - "depends": ["curl", "dplyr", "httr", "rvest", "XBRL", "xml2"] + "depends": ["XBRL", "curl", "dplyr", "httr", "rvest", "xml2"] }, "fipio": { "name": "fipio", @@ -61955,7 +62591,7 @@ "name": "fipp", "version": "1.0.0", "sha256": "0wr3czwsqwa1bpdcjk0r1739vjanxc0fv0vnl3r5lgykrbhw9v3r", - "depends": ["matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "matrixStats"] }, "firebase": { "name": "firebase", @@ -61985,7 +62621,7 @@ "name": "fishRman", "version": "1.2.3", "sha256": "1pyryc6pilyy68z7443gi6ixi8b0hy338l9zfw74isrxywbygy8n", - "depends": ["config", "countrycode", "dplyr", "ggplot2", "golem", "httr", "jsonlite", "maps", "sf", "shiny", "shinyBS", "shinyjs", "shinyWidgets", "viridis"] + "depends": ["config", "countrycode", "dplyr", "ggplot2", "golem", "httr", "jsonlite", "maps", "sf", "shiny", "shinyBS", "shinyWidgets", "shinyjs", "viridis"] }, "fishbc": { "name": "fishbc", @@ -62015,7 +62651,7 @@ "name": "fishmethods", "version": "1.12-1", "sha256": "0ladr3rl55v10kh0556725gygiw338mj3ncpifaij80rph99y66v", - "depends": ["boot", "bootstrap", "data_table", "lme4", "MASS", "numDeriv", "TMB"] + "depends": ["MASS", "TMB", "boot", "bootstrap", "data_table", "lme4", "numDeriv"] }, "fishtree": { "name": "fishtree", @@ -62045,13 +62681,13 @@ "name": "fitHeavyTail", "version": "0.2.0", "sha256": "18iqqn33sznw4c77rl6ryk57grary350ygr58vg062jg1hyxybrg", - "depends": ["ghyp", "ICSNP", "mvtnorm", "numDeriv"] + "depends": ["ICSNP", "ghyp", "mvtnorm", "numDeriv"] }, "fitODBOD": { "name": "fitODBOD", - "version": "1.5.1", - "sha256": "001lc33w3s6liyq558l44kd877bz6js1rkafbz1blgp8csb8ljxy", - "depends": ["bbmle", "hypergeo", "MASS", "mvtnorm"] + "version": "1.5.2", + "sha256": "1gmpdg07vadc0f17l7g9p5gda347bd183d26dlzi4pnx6ywjl4k8", + "depends": ["MASS", "Rdpack", "bbmle", "hypergeo", "mvtnorm"] }, "fitODBODRshiny": { "name": "fitODBODRshiny", @@ -62063,7 +62699,7 @@ "name": "fitPS", "version": "1.0.1", "sha256": "12qqr3d1fzypk0xsjnswhfp52phnhhqzwvj5grfgacjs5h41bz11", - "depends": ["doParallel", "dplyr", "foreach", "Hmisc", "iterators", "knitr", "ks", "pbapply", "Rdpack", "readxl", "VGAM"] + "depends": ["Hmisc", "Rdpack", "VGAM", "doParallel", "dplyr", "foreach", "iterators", "knitr", "ks", "pbapply", "readxl"] }, "fitPoly": { "name": "fitPoly", @@ -62081,7 +62717,7 @@ "name": "fitbitViz", "version": "1.0.6", "sha256": "021ggcfgcwr3l6ppjwfm3q489k9rni20f00mqpfsbh1xjvlrg0rz", - "depends": ["base64enc", "data_table", "ggplot2", "ggthemes", "glue", "hms", "httr", "jsonlite", "leafgl", "leaflet", "lifecycle", "lubridate", "magrittr", "paletteer", "patchwork", "raster", "rayshader", "reshape2", "rstudioapi", "scales", "sf", "terra", "varian", "viridis", "XML"] + "depends": ["XML", "base64enc", "data_table", "ggplot2", "ggthemes", "glue", "hms", "httr", "jsonlite", "leafgl", "leaflet", "lifecycle", "lubridate", "magrittr", "paletteer", "patchwork", "raster", "rayshader", "reshape2", "rstudioapi", "scales", "sf", "terra", "varian", "viridis"] }, "fitbitr": { "name": "fitbitr", @@ -62091,15 +62727,15 @@ }, "fitdistrplus": { "name": "fitdistrplus", - "version": "1.1-11", - "sha256": "0gdm06anjmihfj1d0yiqy36d887kmc0d8553pjl1f90bf4mly9r6", - "depends": ["MASS", "survival"] + "version": "1.2-1", + "sha256": "0n25b3f92pghkavk4j9l25v1k6wjwkmpyvxslf05ixpzkmd23d38", + "depends": ["MASS", "rlang", "survival"] }, "fitlandr": { "name": "fitlandr", "version": "0.1.0", "sha256": "077b97gwlzxmd4i4rsxrgqzlnwn7zf0y0wgcbihck1wvh7gjiara", - "depends": ["cli", "dplyr", "furrr", "future_apply", "ggplot2", "glue", "magrittr", "MASS", "numDeriv", "plotly", "R_utils", "Rfast", "rlang", "rootSolve", "simlandr", "SparseVFC", "tidyr"] + "depends": ["MASS", "R_utils", "Rfast", "SparseVFC", "cli", "dplyr", "furrr", "future_apply", "ggplot2", "glue", "magrittr", "numDeriv", "plotly", "rlang", "rootSolve", "simlandr", "tidyr"] }, "fitmix": { "name": "fitmix", @@ -62111,7 +62747,7 @@ "name": "fitode", "version": "0.1.1", "sha256": "18c5sgvkv9w370zli2kc2gdcbpnb3f5s3ivp0zyd6rqlwdy0c6cg", - "depends": ["bbmle", "coda", "Deriv", "deSolve", "MASS", "mvtnorm", "numDeriv"] + "depends": ["Deriv", "MASS", "bbmle", "coda", "deSolve", "mvtnorm", "numDeriv"] }, "fitplc": { "name": "fitplc", @@ -62129,19 +62765,19 @@ "name": "fitteR", "version": "0.2.0", "sha256": "0l33j69fdfpsp77a1vwqg07b65qaxs875r7lhy2bfi6mxgcklby9", - "depends": ["dplyr", "DT", "maxLik", "R_utils", "shiny"] + "depends": ["DT", "R_utils", "dplyr", "maxLik", "shiny"] }, "fitur": { "name": "fitur", "version": "0.6.2", "sha256": "0bx1w1bpz3i2ybwl386s8y8nxyqwk6w33aqyyw94aq6ink3bw2aw", - "depends": ["actuar", "DT", "e1071", "fitdistrplus", "ggplot2", "goftest", "miniUI", "rstudioapi", "shiny"] + "depends": ["DT", "actuar", "e1071", "fitdistrplus", "ggplot2", "goftest", "miniUI", "rstudioapi", "shiny"] }, "fitzRoy": { "name": "fitzRoy", - "version": "1.4.0", - "sha256": "07qk0kgbsrpjkfm9jqd5zsyg1lj96fj31a413qn7y66vpyljd3p3", - "depends": ["cli", "dplyr", "glue", "httr", "httr2", "jsonlite", "lifecycle", "lubridate", "magrittr", "purrr", "readr", "rlang", "rvest", "stringr", "tibble", "tidyr", "tidyselect", "xml2"] + "version": "1.5.0", + "sha256": "0fw0prfl6iivbsprv0qw13dg5ff80621ziwz5gcy012v6hsbpk25", + "depends": ["cli", "dplyr", "glue", "httr", "httr2", "janitor", "jsonlite", "lifecycle", "lubridate", "magrittr", "purrr", "readr", "rlang", "rvest", "stringr", "tibble", "tidyr", "tidyselect", "xml2"] }, "fivethirtyeight": { "name": "fivethirtyeight", @@ -62177,19 +62813,19 @@ "name": "fixest", "version": "0.12.1", "sha256": "1pqkwzcv8mjh00k0cl0na7izwhwsp6qpimbxmq5005vbhnwimrvw", - "depends": ["dreamerr", "nlme", "numDeriv", "Rcpp", "sandwich", "stringmagic"] + "depends": ["Rcpp", "dreamerr", "nlme", "numDeriv", "sandwich", "stringmagic"] }, "fixr": { "name": "fixr", "version": "0.1.0", "sha256": "074dr1l3bw8v1lrih1mc51dmx02kambis04r9jpx64vnpajjfv8p", - "depends": ["httr", "RCurl", "xml2"] + "depends": ["RCurl", "httr", "xml2"] }, "fixtuRes": { "name": "fixtuRes", "version": "0.1.3", "sha256": "1vmdbx1pfk4kcxq5q5hj4v6rz403xw66gpg6zpvrxkpcgkx2dwyz", - "depends": ["checkmate", "dplyr", "glue", "lubridate", "purrr", "R6", "rlang", "stringi", "yaml"] + "depends": ["R6", "checkmate", "dplyr", "glue", "lubridate", "purrr", "rlang", "stringi", "yaml"] }, "fizzbuzzR": { "name": "fizzbuzzR", @@ -62235,15 +62871,15 @@ }, "flap": { "name": "flap", - "version": "0.1.0", - "sha256": "0aa1ylzq6a5nbkzlyyydw213qfmd3nc8xk8acsrhjg6nxhw8lc5b", + "version": "0.2.0", + "sha256": "18afc26a5iyzcbaynqnvypls2nb24km7h5vlmal5njh3bkv8ypi7", "depends": ["corpcor"] }, "flare": { "name": "flare", "version": "1.7.0.1", "sha256": "1xvrbvq2y7zfp98ijal3z8y1w2xbzfcdykzw4pqc3mnh0qrhq2d5", - "depends": ["igraph", "lattice", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "igraph", "lattice"] }, "flashCard": { "name": "flashCard", @@ -62261,13 +62897,13 @@ "name": "flashier", "version": "1.0.7", "sha256": "08m5nmfzxg8ikswqz3w4fmiw0qixjy5hdwkxkm8nxflf4nkfgx06", - "depends": ["dplyr", "ebnm", "ggplot2", "irlba", "magrittr", "Matrix", "softImpute", "stringr", "tibble", "tidyr"] + "depends": ["Matrix", "dplyr", "ebnm", "ggplot2", "irlba", "magrittr", "softImpute", "stringr", "tibble", "tidyr"] }, "flashlight": { "name": "flashlight", "version": "0.9.0", "sha256": "0nyxx7zrqw8fgy1n81n30m80z7xwkydnhmxj6c22mq83md08rd8c", - "depends": ["cowplot", "dplyr", "ggplot2", "MetricsWeighted", "rlang", "rpart", "rpart_plot", "tibble", "tidyr", "tidyselect", "withr"] + "depends": ["MetricsWeighted", "cowplot", "dplyr", "ggplot2", "rlang", "rpart", "rpart_plot", "tibble", "tidyr", "tidyselect", "withr"] }, "flashr": { "name": "flashr", @@ -62291,7 +62927,7 @@ "name": "flatxml", "version": "0.1.1", "sha256": "1qsiqi8aszk9djlhysf6lcm41dq4pcw5jv6mdvb1mgxni7g3sgfv", - "depends": ["crayon", "httr", "RCurl", "xml2"] + "depends": ["RCurl", "crayon", "httr", "xml2"] }, "fledge": { "name": "fledge", @@ -62303,7 +62939,7 @@ "name": "flevr", "version": "0.0.4", "sha256": "1h1wnqd1fv6z4mfrchm5rv9x9s48vp67csf3a8gyj7gm3lppgnfm", - "depends": ["caret", "dplyr", "kernlab", "magrittr", "mvtnorm", "ranger", "rlang", "SuperLearner", "tibble"] + "depends": ["SuperLearner", "caret", "dplyr", "kernlab", "magrittr", "mvtnorm", "ranger", "rlang", "tibble"] }, "flexCWM": { "name": "flexCWM", @@ -62361,9 +62997,9 @@ }, "flexmsm": { "name": "flexmsm", - "version": "0.1.1", - "sha256": "07m2dsc1a4qschprcqljzv8kpqjl1bw0bkhqbcr821xrf1id0xxr", - "depends": ["GJRM", "matrixStats", "mgcv", "msm", "trust"] + "version": "0.1.2", + "sha256": "1kgbnic93b58xp5hirwpxv5x50y69fczqm023kah3g1jx2fw8i7g", + "depends": ["GJRM", "matrixStats", "mgcv", "trust"] }, "flexpolyline": { "name": "flexpolyline", @@ -62375,7 +63011,7 @@ "name": "flexrsurv", "version": "2.0.18", "sha256": "10l1xh43c7lkgxjpxis5zy66dji2ifxhc41vzqhpj8h6hqw052bv", - "depends": ["Epi", "Formula", "formula_tools", "Matrix", "numDeriv", "orthogonalsplinebasis", "R_utils", "statmod", "survival"] + "depends": ["Epi", "Formula", "Matrix", "R_utils", "formula_tools", "numDeriv", "orthogonalsplinebasis", "statmod", "survival"] }, "flexsiteboard": { "name": "flexsiteboard", @@ -62385,9 +63021,9 @@ }, "flexsurv": { "name": "flexsurv", - "version": "2.3", - "sha256": "1y31ghfn02fcpss3aliy5r7kk0a7h0h2krnj665h13y8jgqkc6j7", - "depends": ["assertthat", "deSolve", "dplyr", "generics", "ggplot2", "magrittr", "Matrix", "mstate", "muhaz", "mvtnorm", "numDeriv", "purrr", "quadprog", "Rcpp", "rlang", "rstpm2", "statmod", "survival", "tibble", "tidyr", "tidyselect"] + "version": "2.3.2", + "sha256": "1171m8rx98bdkij0vp1w87msfjvbqsrh4jkzpm39yz0vg8charsv", + "depends": ["Matrix", "Rcpp", "assertthat", "deSolve", "dplyr", "generics", "ggplot2", "magrittr", "mstate", "muhaz", "mvtnorm", "numDeriv", "purrr", "quadprog", "rlang", "rstpm2", "statmod", "survival", "tibble", "tidyr", "tidyselect"] }, "flexsurvcure": { "name": "flexsurvcure", @@ -62423,13 +63059,13 @@ "name": "flimo", "version": "0.1.5", "sha256": "00l0w9z1j2yy4sl1fly7lw4rrdwcwnb26va2d5vsvjldwcmsx5pd", - "depends": ["ggplot2", "JuliaConnectoR"] + "depends": ["JuliaConnectoR", "ggplot2"] }, "flintyR": { "name": "flintyR", "version": "0.1.0", "sha256": "1md0p3i9lny5sn1jjh8ss6bw4w7q8ydi6kh5smjbbgbn86qlcvwy", - "depends": ["assertthat", "doParallel", "foreach", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["Rcpp", "RcppArmadillo", "assertthat", "doParallel", "foreach", "testthat"] }, "flip": { "name": "flip", @@ -62465,7 +63101,7 @@ "name": "flipr", "version": "0.3.3", "sha256": "188kdgk390rh8wpfsvqbwpwa3dmwzlzv8sdgvfxl9f0ddbxasghb", - "depends": ["cli", "dials", "ggplot2", "magrittr", "optimParallel", "pbapply", "purrr", "R6", "Rcpp", "rgenoud", "rlang", "tibble", "usethis", "viridisLite", "withr"] + "depends": ["R6", "Rcpp", "cli", "dials", "ggplot2", "magrittr", "optimParallel", "pbapply", "purrr", "rgenoud", "rlang", "tibble", "usethis", "viridisLite", "withr"] }, "flipscores": { "name": "flipscores", @@ -62495,13 +63131,13 @@ "name": "flocker", "version": "1.0-0", "sha256": "19029by01jgwdlc0m4d05cfia8v0zfxf6k4aqm6wpvlbi7ap6hi6", - "depends": ["abind", "assertthat", "boot", "brms", "loo", "MASS", "matrixStats", "withr"] + "depends": ["MASS", "abind", "assertthat", "boot", "brms", "loo", "matrixStats", "withr"] }, "flood": { "name": "flood", "version": "0.1.1", "sha256": "0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p", - "depends": ["copula", "evd", "magrittr", "TLMoments"] + "depends": ["TLMoments", "copula", "evd", "magrittr"] }, "flora": { "name": "flora", @@ -62513,7 +63149,7 @@ "name": "florabr", "version": "1.2.0", "sha256": "0rfzvrsv4aai3ynwxvnqiki58gbjp4lwrr36kfnkn59bpicvxmzg", - "depends": ["data_table", "httr", "terra", "XML"] + "depends": ["XML", "data_table", "httr", "terra"] }, "flow": { "name": "flow", @@ -62531,13 +63167,13 @@ "name": "flowchart", "version": "0.4.0", "sha256": "1h34phpgx139v28rxgiyjl696k08lp7frh3sxizj97pix29j5yds", - "depends": ["dplyr", "Gmisc", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Gmisc", "dplyr", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "flowml": { "name": "flowml", "version": "0.1.3", "sha256": "1v26lncq6qqx7x2wnvaxwb88s7hgdwj9cv16kkzn4fnybwsmkw5g", - "depends": ["ABCanalysis", "caret", "data_table", "dplyr", "fastshap", "furrr", "future", "magrittr", "optparse", "purrr", "R6", "readr", "rjson", "rlang", "rsample", "stringr", "tibble", "tidyr", "vip"] + "depends": ["ABCanalysis", "R6", "caret", "data_table", "dplyr", "fastshap", "furrr", "future", "magrittr", "optparse", "purrr", "readr", "rjson", "rlang", "rsample", "stringr", "tibble", "tidyr", "vip"] }, "flowr": { "name": "flowr", @@ -62549,7 +63185,7 @@ "name": "flps", "version": "1.1.0", "sha256": "0pdf4czw5rdf5bcsbq7ncx0m5iz9dl0m5l8z3x799zs1svdlclfp", - "depends": ["ggplot2", "glue", "MASS", "mirt", "mvtnorm", "Rcpp", "rstan"] + "depends": ["MASS", "Rcpp", "ggplot2", "glue", "mirt", "mvtnorm", "rstan"] }, "flsa": { "name": "flsa", @@ -62559,8 +63195,8 @@ }, "fluidsynth": { "name": "fluidsynth", - "version": "1.0.0", - "sha256": "04jn17rxafrw47gc98c5k4jzsbdsml0brq85zr7xvijirnd15yxn", + "version": "1.0.1", + "sha256": "1vqi9p69wjsh9shhjg0rk025hf4rawj0piw5037y97ml3n858k2l", "depends": ["av", "rappdirs"] }, "fluoSurv": { @@ -62591,7 +63227,7 @@ "name": "flying", "version": "0.1.3", "sha256": "04wfcsbq8icvk1nnczvic5cp4nb40hxj3g6lasyb1dvhsh0svg0q", - "depends": ["kableExtra", "knitr", "Rcpp", "rmarkdown"] + "depends": ["Rcpp", "kableExtra", "knitr", "rmarkdown"] }, "fma": { "name": "fma", @@ -62609,7 +63245,7 @@ "name": "fmcmc", "version": "0.5-2", "sha256": "0swlghwsir1gjw5n2c8kfi5zh6bbqjhk7nnjds2b6656s8xdpr9a", - "depends": ["coda", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "coda"] }, "fmdates": { "name": "fmdates", @@ -62627,25 +63263,25 @@ "name": "fmeffects", "version": "0.1.3", "sha256": "0hw3jsq4s4rh66n9j3sll9sarnnbxp90ma6sqs9q4gjkm1qi1d1p", - "depends": ["checkmate", "cli", "cowplot", "data_table", "ggparty", "ggplot2", "partykit", "R6", "testthat"] + "depends": ["R6", "checkmate", "cli", "cowplot", "data_table", "ggparty", "ggplot2", "partykit", "testthat"] }, "fmerPack": { "name": "fmerPack", "version": "0.0-1", "sha256": "0p9jfgkzs97r6ya1x8ax7bza17b03grqxa22ja13s12vj0cdkv78", - "depends": ["abind", "flexmix", "glmnet", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "abind", "flexmix", "glmnet"] }, "fmesher": { "name": "fmesher", - "version": "0.1.6", - "sha256": "0dszz7a6asyjwwgq8ggqll48ndyfn14lndf77arl60ns3h7v3ygn", - "depends": ["dplyr", "lifecycle", "Matrix", "Rcpp", "rlang", "sf", "sp", "tibble", "withr"] + "version": "0.1.7", + "sha256": "1kwy04qs8pkjyd9ad55x8dr006z2nv0dyvgvhx15s3p3qhxgg6mm", + "depends": ["Matrix", "Rcpp", "dplyr", "lifecycle", "rlang", "sf", "sp", "tibble", "withr"] }, "fmf": { "name": "fmf", "version": "1.1.1", "sha256": "0b26040a39jys1z3h9mq9k7rjr0iyiialq442ir8vgzvmrh383cs", - "depends": ["C50", "caret", "dplyr", "e1071", "factoextra", "FactoMineR", "ggplot2", "kernlab", "Rcpp", "RcppArmadillo", "solitude"] + "depends": ["C50", "FactoMineR", "Rcpp", "RcppArmadillo", "caret", "dplyr", "e1071", "factoextra", "ggplot2", "kernlab", "solitude"] }, "fmpcloudr": { "name": "fmpcloudr", @@ -62655,15 +63291,15 @@ }, "fmri": { "name": "fmri", - "version": "1.9.12", - "sha256": "1cv5mxcdpyf05n5pcjdawl59j7f4k40386r4m38qf15vcy45zdfq", + "version": "1.9.12.1", + "sha256": "0fyvnc39la5wgd9232nw6lp6yi1v3nkjwzn0sbhm4rckknibb5s4", "depends": ["aws", "metafor", "nlme", "oro_nifti"] }, "fmriqa": { "name": "fmriqa", "version": "0.3.0", "sha256": "1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv", - "depends": ["ggplot2", "gridExtra", "imager", "optparse", "pracma", "RcppEigen", "reshape2", "RNifti", "tidyr", "viridisLite"] + "depends": ["RNifti", "RcppEigen", "ggplot2", "gridExtra", "imager", "optparse", "pracma", "reshape2", "tidyr", "viridisLite"] }, "fmsb": { "name": "fmsb", @@ -62681,19 +63317,19 @@ "name": "fmtr", "version": "1.6.5", "sha256": "1q565knjq8hzazli5skjvfd02jsh2c220hsrvc1h4dly666qvxvl", - "depends": ["common", "crayon", "Rcpp", "tibble"] + "depends": ["Rcpp", "common", "crayon", "tibble"] }, "fmx": { "name": "fmx", "version": "0.1.2", "sha256": "02f4b9vmnp2gr47ql6smxiv7x9as6p44fi4kvg6lcn1xd386hx6z", - "depends": ["goftest", "param2moment", "sn", "TukeyGH77", "VGAM"] + "depends": ["TukeyGH77", "VGAM", "goftest", "param2moment", "sn"] }, "fnets": { "name": "fnets", "version": "0.1.6", "sha256": "138r081mpgw1csm93xcrci3djd7mrcl6drsdr6cpjz1fdzv1whjy", - "depends": ["doParallel", "fields", "foreach", "igraph", "lpSolve", "MASS", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "doParallel", "fields", "foreach", "igraph", "lpSolve"] }, "focusedMDS": { "name": "focusedMDS", @@ -62703,9 +63339,9 @@ }, "foghorn": { "name": "foghorn", - "version": "1.5.2", - "sha256": "1xmyl4m2chv2z6adfyzmv93zqjl0pxk364zy0jfym8vgnzrmcb26", - "depends": ["clisymbols", "crayon", "curl", "httr2", "rlang", "rvest", "tibble", "xml2"] + "version": "1.6.0", + "sha256": "1x3zgjy1pnjv0a2dra5a36fwg3lgq8yfqdm731r28kdwy6d1az85", + "depends": ["cli", "curl", "httr2", "rlang", "rvest", "tibble", "xml2"] }, "folders": { "name": "folders", @@ -62771,7 +63407,7 @@ "name": "foodwebWrapper", "version": "1.1.0", "sha256": "1gh1xs60bnm2g1d7dg67q683bzkh5ih1gz3psvv3dmygm5f1j1bc", - "depends": ["dplyr", "magrittr", "mvbutils", "R2HTML", "stringr", "textshaping", "tibble", "tidyverse"] + "depends": ["R2HTML", "dplyr", "magrittr", "mvbutils", "stringr", "textshaping", "tibble", "tidyverse"] }, "foolbox": { "name": "foolbox", @@ -62837,7 +63473,7 @@ "name": "foreSIGHT", "version": "1.2.0", "sha256": "1nw93xs10qfj489i9xlamjrk8rf73b7511gdsg49vvbgjp4945mr", - "depends": ["cmaes", "cowplot", "dfoptim", "directlabels", "fields", "GA", "ggplot2", "jsonlite", "lattice", "Matrix", "moments", "mvtnorm", "progress", "rcorpora", "Rcpp", "RGN", "rlang", "scales", "SoilHyP", "viridisLite"] + "depends": ["GA", "Matrix", "RGN", "Rcpp", "SoilHyP", "cmaes", "cowplot", "dfoptim", "directlabels", "fields", "ggplot2", "jsonlite", "lattice", "moments", "mvtnorm", "progress", "rcorpora", "rlang", "scales", "viridisLite"] }, "foreach": { "name": "foreach", @@ -62853,9 +63489,9 @@ }, "forecast": { "name": "forecast", - "version": "8.22.0", - "sha256": "09s5fdyzc6f5l8dy7ynjmd6l5fk3wvz59q0kfv2fd9da5c1mqd8w", - "depends": ["colorspace", "fracdiff", "generics", "ggplot2", "lmtest", "magrittr", "nnet", "Rcpp", "RcppArmadillo", "timeDate", "tseries", "urca", "zoo"] + "version": "8.23.0", + "sha256": "100qi8cgr5dz3qskrgrsjn77m7szs5rfpgqfdwlgp67l708x9hzz", + "depends": ["Rcpp", "RcppArmadillo", "colorspace", "fracdiff", "generics", "ggplot2", "lmtest", "magrittr", "nnet", "timeDate", "tseries", "urca", "withr", "zoo"] }, "forecastHybrid": { "name": "forecastHybrid", @@ -62885,12 +63521,12 @@ "name": "forecasteR", "version": "2.0.2", "sha256": "0pwgkkzyfzjjp9qrx4xx3b68617a18i3an3gcpprkg4mwpsvcj0x", - "depends": ["colourpicker", "config", "DT", "echarts4r", "forecast", "golem", "htmltools", "htmlwidgets", "keras", "lubridate", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "stringr", "zoo"] + "depends": ["DT", "colourpicker", "config", "echarts4r", "forecast", "golem", "htmltools", "htmlwidgets", "keras", "lubridate", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "stringr", "zoo"] }, "foreign": { "name": "foreign", - "version": "0.8-86", - "sha256": "1qf3x1vacc4sdcmw4mbh0251ii4xd8z1xmmd9isak75j100i4ad7", + "version": "0.8-87", + "sha256": "0mi8vf3bsvrn2nh9kxjlgsmvxrc8icw51scr0mscqyp8r3saq90s", "depends": [] }, "forensIT": { @@ -62909,7 +63545,7 @@ "name": "forestControl", "version": "0.2.2", "sha256": "0g81ml12xhq2a868vlpsybpsqz7p4hn9jnxh3dvq6g4k1hc1292x", - "depends": ["dplyr", "magrittr", "purrr", "Rcpp", "tibble"] + "depends": ["Rcpp", "dplyr", "magrittr", "purrr", "tibble"] }, "forestError": { "name": "forestError", @@ -62941,6 +63577,12 @@ "sha256": "0pvh50sdiscgkshlmyngz7pkmpaz03c8x3gfjp5ir52f8710ngb7", "depends": ["blockCV", "dplyr", "forcats", "ggplot2", "ggridges", "glue", "magrittr", "mvnfast", "patchwork", "purrr", "rlang", "sf", "sfheaders", "snakecase", "stringr", "tibble", "tidyr", "yardstick"] }, + "forested": { + "name": "forested", + "version": "0.1.0", + "sha256": "0aaikr5n2x1ap78diyvn56hnshdqk65x7ykrrx4mjb3w4c66jw9b", + "depends": [] + }, "forestinventory": { "name": "forestinventory", "version": "1.0.0", @@ -62949,15 +63591,15 @@ }, "forestly": { "name": "forestly", - "version": "0.1.0", - "sha256": "1pbq60agq62aiqgg48r92zpk89y74x80hwidqivjrmjkpjx92sgj", - "depends": ["brew", "crosstalk", "glue", "htmltools", "metalite", "metalite_ae", "reactable", "reactR", "rlang"] + "version": "0.1.1", + "sha256": "0ihn48bmnlhjqwvaxzinfdbnzjz9cqn3amw0gnyqzdlai81md3dx", + "depends": ["brew", "crosstalk", "ggplot2", "glue", "htmltools", "metalite", "metalite_ae", "reactR", "reactable", "rlang", "uuid"] }, "forestmangr": { "name": "forestmangr", "version": "0.9.6", "sha256": "0l8av1vg8dyrb15m08gby13qfalwcfizfn3jc2avvga8inyag0c5", - "depends": ["broom", "car", "dplyr", "FinCal", "ggdendro", "ggplot2", "ggpmisc", "ggthemes", "gridExtra", "magrittr", "miniUI", "minpack_lm", "plyr", "purrr", "rlang", "scales", "shiny", "systemfit", "tibble", "tidyr"] + "depends": ["FinCal", "broom", "car", "dplyr", "ggdendro", "ggplot2", "ggpmisc", "ggthemes", "gridExtra", "magrittr", "miniUI", "minpack_lm", "plyr", "purrr", "rlang", "scales", "shiny", "systemfit", "tibble", "tidyr"] }, "forestmodel": { "name": "forestmodel", @@ -63027,9 +63669,9 @@ }, "formatters": { "name": "formatters", - "version": "0.5.6", - "sha256": "1mq84hj9la0m0007l9l1bzc7abrk5mg5hv4jbv5kp8nwwax5dx5g", - "depends": ["checkmate", "htmltools"] + "version": "0.5.8", + "sha256": "0skfmizlr028j2cy2f03vgs1gdsvlk5r67cj1pmm9zky5nymdh1k", + "depends": ["checkmate", "htmltools", "lifecycle"] }, "formods": { "name": "formods", @@ -63069,9 +63711,9 @@ }, "forsearch": { "name": "forsearch", - "version": "6.0.0", - "sha256": "1x2q13wmdczyn9lwrmrissc2cp001ca3gyyvy32vjg3844arxckk", - "depends": ["Cairo", "formula_tools", "ggplot2", "Hmisc", "nlme", "survival", "tibble"] + "version": "6.2.0", + "sha256": "02k3k9pv55aymym8p60xl071161zigr7m8m3vpna68rril8laq8i", + "depends": ["Cairo", "Hmisc", "formula_tools", "ggplot2", "nlme", "survival", "tibble"] }, "forstringr": { "name": "forstringr", @@ -63105,9 +63747,9 @@ }, "fossilbrush": { "name": "fossilbrush", - "version": "1.0.3", - "sha256": "0h5grarpk6ml07gxb3bmb93fys55f6pp4qr60fqq97zx1lg9hns4", - "depends": ["curl", "data_table", "igraph", "Matrix", "pbapply", "stringdist", "stringr"] + "version": "1.0.5", + "sha256": "056krpxsx0gz47py6v2ldik74gsnhbc1d0v144i7v4f4qcm14hs1", + "depends": ["Matrix", "data_table", "igraph", "pbapply", "stringdist", "stringr"] }, "foto": { "name": "foto", @@ -63119,7 +63761,7 @@ "name": "foundry", "version": "0.13.0", "sha256": "06mmqiaakha1xw2l5zib5nmwijjv4rjbpsx52ck7xihm6w192lss", - "depends": ["arrow", "httr", "jsonlite", "R6", "yaml"] + "depends": ["R6", "arrow", "httr", "jsonlite", "yaml"] }, "fourPNO": { "name": "fourPNO", @@ -63149,7 +63791,7 @@ "name": "fpc", "version": "2.2-12", "sha256": "11s7211mnb9c72061mrcdfdwfph6nmbwcnpjgl32i2p7qys9cnam", - "depends": ["class", "cluster", "diptest", "flexmix", "kernlab", "MASS", "mclust", "prabclus", "robustbase"] + "depends": ["MASS", "class", "cluster", "diptest", "flexmix", "kernlab", "mclust", "prabclus", "robustbase"] }, "fpcb": { "name": "fpcb", @@ -63173,7 +63815,7 @@ "name": "fplot", "version": "1.1.0", "sha256": "0rjdjv67yh6nbxi3l8ds0dr26s9cxsrfqc47rkfwh82g1iga2fqi", - "depends": ["data_table", "dreamerr", "Formula", "Rcpp"] + "depends": ["Formula", "Rcpp", "data_table", "dreamerr"] }, "fplyr": { "name": "fplyr", @@ -63213,9 +63855,9 @@ }, "fpp3": { "name": "fpp3", - "version": "0.5", - "sha256": "1yg2wv1mdqrmpxbz9kdsxw84q5hg12rsmz1k3i4dq1nymqbkkfq2", - "depends": ["cli", "crayon", "dplyr", "fable", "fabletools", "feasts", "ggplot2", "lubridate", "magrittr", "purrr", "rstudioapi", "tibble", "tidyr", "tsibble", "tsibbledata"] + "version": "1.0.0", + "sha256": "15kgllix1syi7974d5mrfa20zgx8s0hj2wq6wz1mlpzkaa6w2i9j", + "depends": ["cli", "crayon", "dplyr", "fable", "fabletools", "feasts", "ggplot2", "lubridate", "purrr", "rstudioapi", "tibble", "tidyr", "tsibble", "tsibbledata"] }, "fptdApprox": { "name": "fptdApprox", @@ -63245,13 +63887,13 @@ "name": "fr", "version": "0.5.1", "sha256": "0kj7qjv6jdrp8wm7ynpi4mjm4sx9b2aqnhqb0pn1xnpbsj9x7557", - "depends": ["cli", "dplyr", "purrr", "rlang", "S7", "tibble", "tidyselect", "vroom", "yaml"] + "depends": ["S7", "cli", "dplyr", "purrr", "rlang", "tibble", "tidyselect", "vroom", "yaml"] }, "frab": { "name": "frab", - "version": "0.0-3", - "sha256": "08nlhshg3bz8b830vl877xyyjgngxk7sf5vp5d0np3bfhrylh0wv", - "depends": ["disordR", "mathjaxr", "Rcpp"] + "version": "0.0-6", + "sha256": "1w57icar18xfgk4jx5v5b69xn0msjndw13j6kplgvk1q50hryx5c", + "depends": ["Rcpp", "disordR"] }, "fracdiff": { "name": "fracdiff", @@ -63277,12 +63919,6 @@ "sha256": "1cnp8qrc6jpdj0grwkvn5jkdymjfhg5ybbhqvknxirc4g981q8bj", "depends": ["imager", "plyr"] }, - "fractalRegression": { - "name": "fractalRegression", - "version": "1.2", - "sha256": "1d79bv3lpg1p6zvjsnf8qwm5ajpsklm8gpqm241jv1cgjyfsi64x", - "depends": ["colorRamps", "Rcpp", "RcppArmadillo", "RcppEigen"] - }, "fractaldim": { "name": "fractaldim", "version": "0.8-5", @@ -63303,33 +63939,39 @@ }, "fragility": { "name": "fragility", - "version": "1.4", - "sha256": "1izb3mkqxkhayfszlspqpjhai3wif6clv5yyc22pacc207p19542", + "version": "1.5", + "sha256": "0das343cjixmlsdbx9i897yf3fcaj55f2dxh0wd6jsqypf67lk0q", "depends": ["metafor", "netmeta", "plotrix"] }, "frailtyEM": { "name": "frailtyEM", "version": "1.0.1", "sha256": "0ajqmn8353va8k3idsl90xsrhpdqarfmvg84d4kwayxlqy6dmbb0", - "depends": ["expint", "ggplot2", "magrittr", "Matrix", "msm", "numDeriv", "Rcpp", "survival", "tibble"] + "depends": ["Matrix", "Rcpp", "expint", "ggplot2", "magrittr", "msm", "numDeriv", "survival", "tibble"] }, "frailtyHL": { "name": "frailtyHL", "version": "2.3", "sha256": "115iv1d2c9mvviick8b24bn6kdbsvnf21nvfjm9a8dk0x07hrv5g", - "depends": ["cmprsk", "Matrix", "survival"] + "depends": ["Matrix", "cmprsk", "survival"] }, "frailtyMMpen": { "name": "frailtyMMpen", "version": "1.2.1", "sha256": "03d3mlbwvpqjgxgw4cqy2502lx4gh8fvf7sbcq06w8yjljffn0a0", - "depends": ["mgcv", "numDeriv", "Rcpp", "RcppGSL", "survival"] + "depends": ["Rcpp", "RcppGSL", "mgcv", "numDeriv", "survival"] }, "frailtySurv": { "name": "frailtySurv", "version": "1.3.8", "sha256": "1k1pxn47gglkcjzix3h1vn9z631ms6icgv5df6pb90008qmilck7", - "depends": ["ggplot2", "nleqslv", "numDeriv", "Rcpp", "reshape2", "survival"] + "depends": ["Rcpp", "ggplot2", "nleqslv", "numDeriv", "reshape2", "survival"] + }, + "frailtypack": { + "name": "frailtypack", + "version": "3.6.2", + "sha256": "06nwm4dvhszg2843d75rf42wrrglmlqg61baz7zpymxq4717chj4", + "depends": ["MASS", "boot", "doBy", "nlme", "rootSolve", "shiny", "statmod", "survC1", "survival"] }, "frair": { "name": "frair", @@ -63371,7 +64013,7 @@ "name": "frechet", "version": "0.3.0", "sha256": "0lxzhkimyhnisbvfgv8l9vv4pzjj6igcy8fyx25is43g2cz35ymq", - "depends": ["boot", "corrplot", "e1071", "fdadensity", "fdapace", "Matrix", "osqp", "pracma", "quadprog", "trust"] + "depends": ["Matrix", "boot", "corrplot", "e1071", "fdadensity", "fdapace", "osqp", "pracma", "quadprog", "trust"] }, "fredr": { "name": "fredr", @@ -63389,7 +64031,7 @@ "name": "freealg", "version": "1.1-1", "sha256": "0jx9r40hql8fkpjr005snavj8fw5ykqa4ya7cy59jhxr31byma3j", - "depends": ["disordR", "mathjaxr", "partitions", "Rcpp"] + "depends": ["Rcpp", "disordR", "mathjaxr", "partitions"] }, "freebird": { "name": "freebird", @@ -63419,7 +64061,7 @@ "name": "freesurfer", "version": "1.6.10", "sha256": "1i687yj76gbassyldpgal33cxd2hixzl0779ql9fjsaibh5m1dc4", - "depends": ["neurobase", "R_utils", "reshape2"] + "depends": ["R_utils", "neurobase", "reshape2"] }, "freesurferformats": { "name": "freesurferformats", @@ -63511,11 +64153,17 @@ "sha256": "1d54zr87795gm4qc6aw3nv9i83rhnhv14rcpkrivdxhxv8rnhnn9", "depends": ["survival"] }, + "frequentistSSDBinary": { + "name": "frequentistSSDBinary", + "version": "0.1.0", + "sha256": "05lcspm6a6rmsvgki5japmfzfa53dpa7z65n4my42xbjzyr3hnfx", + "depends": ["clinfun", "mvtnorm", "ph2mult"] + }, "fresh": { "name": "fresh", - "version": "0.2.0", - "sha256": "1787mm6w2s5x9scxy7r9cb77rgpmy4ngwkn4z8g3gs48mrab4bd9", - "depends": ["htmltools", "rstudioapi", "sass", "shiny"] + "version": "0.2.1", + "sha256": "19ki4hxlqzshdmy981gcvbn8wxqa893p5rs55l0q7iipkcmhf9jq", + "depends": ["bslib", "htmltools", "rstudioapi", "sass", "shiny"] }, "freshr": { "name": "freshr", @@ -63581,7 +64229,7 @@ "name": "frscore", "version": "0.4.1", "sha256": "1phmy313xl1x3v1smf6f19aa1sd0cypfn5hpg715k9p9z9sh58qq", - "depends": ["cna", "dplyr", "lifecycle", "magrittr", "Rfast", "rlang", "withr"] + "depends": ["Rfast", "cna", "dplyr", "lifecycle", "magrittr", "rlang", "withr"] }, "fruclimadapt": { "name": "fruclimadapt", @@ -63605,7 +64253,7 @@ "name": "fscache", "version": "1.0.5", "sha256": "0815z6a677ygiv4hlslmvbnd1pdnh2xz3sw0nzgrcr2vzj83h25x", - "depends": ["chk", "lgr", "lifecycle", "R_utils", "R6", "stringi"] + "depends": ["R6", "R_utils", "chk", "lgr", "lifecycle", "stringi"] }, "fscaret": { "name": "fscaret", @@ -63635,7 +64283,7 @@ "name": "fslr", "version": "2.25.3", "sha256": "0pp1hn80qknxg7w24qqgjq0y96i22qixsdgs2bkjylwh9zhxbg9x", - "depends": ["neurobase", "oro_nifti", "R_utils"] + "depends": ["R_utils", "neurobase", "oro_nifti"] }, "fsn": { "name": "fsn", @@ -63665,13 +64313,13 @@ "name": "fssemR", "version": "0.1.8", "sha256": "1rja69b6x5vc302nksh5m6ssp2lx8drv9gjnkv6j9xr3hd2407xi", - "depends": ["glmnet", "igraph", "MASS", "Matrix", "mvtnorm", "qpdf", "qtl", "Rcpp", "RcppEigen", "stringr"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "glmnet", "igraph", "mvtnorm", "qpdf", "qtl", "stringr"] }, "fst": { "name": "fst", "version": "0.9.8", "sha256": "0r96inwrr960m7wmc80603bw2vvvwab225bh9dq3lalwhy4yiis4", - "depends": ["fstcore", "Rcpp"] + "depends": ["Rcpp", "fstcore"] }, "fst4pg": { "name": "fst4pg", @@ -63719,7 +64367,7 @@ "name": "ftsa", "version": "6.4", "sha256": "14s3qr8czycqgn6a462bmy575mn77lrhrb4ahpaa67m2xlcqpw4v", - "depends": ["boot", "colorspace", "e1071", "ecp", "evgam", "fda", "fdapace", "fGarch", "forecast", "glue", "KernSmooth", "LaplacesDemon", "MASS", "pcaPP", "pdfCluster", "psych", "rainbow", "ROOPSD", "sde", "strucchange", "vars"] + "depends": ["KernSmooth", "LaplacesDemon", "MASS", "ROOPSD", "boot", "colorspace", "e1071", "ecp", "evgam", "fGarch", "fda", "fdapace", "forecast", "glue", "pcaPP", "pdfCluster", "psych", "rainbow", "sde", "strucchange", "vars"] }, "ftsspec": { "name": "ftsspec", @@ -63763,6 +64411,12 @@ "sha256": "0pn4lh59snfcyyi28350lm4n9xh6y25hpjr38dc33bic4cfbqiyr", "depends": [] }, + "fullRankMatrix": { + "name": "fullRankMatrix", + "version": "0.1.0", + "sha256": "1jlrifgy4fk07a4qfym3ywqnjb1x7grcdc42cncbj2n87w7p6yy4", + "depends": [] + }, "fullfact": { "name": "fullfact", "version": "1.5.2", @@ -63785,7 +64439,7 @@ "name": "funFEM", "version": "1.2", "sha256": "17pw743qnljwasj4cg8m8sg9j6piy7g69jr57aqmbizlfdqvvl05", - "depends": ["elasticnet", "fda", "MASS"] + "depends": ["MASS", "elasticnet", "fda"] }, "funGp": { "name": "funGp", @@ -63803,13 +64457,13 @@ "name": "funModeling", "version": "1.9.5", "sha256": "0wrcfqn0sj2shs2105glhm4ll5avbh8aq0yc6q72cjixjck9hn6h", - "depends": ["cli", "dplyr", "entropy", "ggplot2", "gridExtra", "Hmisc", "lazyeval", "moments", "pander", "RColorBrewer", "reshape2", "ROCR", "scales", "stringr"] + "depends": ["Hmisc", "RColorBrewer", "ROCR", "cli", "dplyr", "entropy", "ggplot2", "gridExtra", "lazyeval", "moments", "pander", "reshape2", "scales", "stringr"] }, "funStatTest": { "name": "funStatTest", "version": "1.0.3", "sha256": "162wm4j63bg7l1cyqjb23cn68pm1zg1nc25zxhy3mb12pipnqq2x", - "depends": ["checkmate", "distr", "dplyr", "ggplot2", "magrittr", "Matrix", "pbapply", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Matrix", "checkmate", "distr", "dplyr", "ggplot2", "magrittr", "pbapply", "stringr", "tibble", "tidyr", "tidyselect"] }, "func2vis": { "name": "func2vis", @@ -63819,9 +64473,9 @@ }, "funcharts": { "name": "funcharts", - "version": "1.4.1", - "sha256": "0rxj7cpvl0ng1drqp5iyg7j39pn3pss2zg3zk8kf0vc6ajzfvr5g", - "depends": ["dplyr", "fda", "fda_usc", "ggplot2", "MASS", "Matrix", "matrixStats", "mvtnorm", "patchwork", "rlang", "roahd", "robustbase", "rofanova", "rrcov", "RSpectra", "stringr", "tidyr"] + "version": "1.5.0", + "sha256": "1klw181lmxr0hph9hq87ka9c85jhyjgdkb8mkpbp6arkx57vh0gz", + "depends": ["MASS", "Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "Rfast", "dplyr", "fda", "fda_usc", "ggplot2", "matrixStats", "mvtnorm", "patchwork", "rlang", "roahd", "robustbase", "rofanova", "rrcov", "stringr", "tidyr"] }, "funchir": { "name": "funchir", @@ -63845,13 +64499,13 @@ "name": "fundiversity", "version": "1.1.1", "sha256": "1wp2v7bd1vc8gs9g41s77pazkrv3mdw2m3pgjr7k6wdch0a9qhx2", - "depends": ["future_apply", "geometry", "Matrix", "vegan"] + "depends": ["Matrix", "future_apply", "geometry", "vegan"] }, "fungible": { "name": "fungible", "version": "2.4.4", "sha256": "18h4n7q130z2i86zd7gwrh3wv9h4pd4niands1p94rialrdg9vda", - "depends": ["clue", "crayon", "CVXR", "DEoptim", "GA", "GPArotation", "lattice", "MASS", "MBESS", "MCMCpack", "mvtnorm", "nleqslv", "pbmcapply", "Rcsdp", "RSpectra", "sem"] + "depends": ["CVXR", "DEoptim", "GA", "GPArotation", "MASS", "MBESS", "MCMCpack", "RSpectra", "Rcsdp", "clue", "crayon", "lattice", "mvtnorm", "nleqslv", "pbmcapply", "sem"] }, "funique": { "name": "funique", @@ -63869,7 +64523,7 @@ "name": "funkyheatmap", "version": "0.5.0", "sha256": "1rgb49pzhz91qlw75zp0bi231nc9frf1wrp1xd22hpydccklvq6r", - "depends": ["assertthat", "cli", "cowplot", "dplyr", "ggforce", "ggplot2", "jsonlite", "patchwork", "purrr", "RColorBrewer", "Rdpack", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "Rdpack", "assertthat", "cli", "cowplot", "dplyr", "ggforce", "ggplot2", "jsonlite", "patchwork", "purrr", "stringr", "tibble", "tidyr"] }, "funmediation": { "name": "funmediation", @@ -63893,7 +64547,7 @@ "name": "funpca", "version": "9.0", "sha256": "09xdqlma9ywjj8zbj7jjjfbh0vydvni65xgdjymchl0zfhfw8ihl", - "depends": ["Brobdingnag", "fda", "MASS", "nlme"] + "depends": ["Brobdingnag", "MASS", "fda", "nlme"] }, "funprog": { "name": "funprog", @@ -63911,7 +64565,7 @@ "name": "funrar", "version": "1.5.0", "sha256": "1c9mjbl8g0w7bk7kkms14dyq7yi4c8id4ln29khfabim61dapmqd", - "depends": ["cluster", "Matrix"] + "depends": ["Matrix", "cluster"] }, "funreg": { "name": "funreg", @@ -63923,7 +64577,7 @@ "name": "funspace", "version": "0.2.2", "sha256": "036hx837rlarvms79jjg3lg77h6k94p3n8n1hpw70v8hcrz6dr54", - "depends": ["ade4", "ape", "ks", "MASS", "mgcv", "missForest", "paran", "phytools", "vegan", "viridis"] + "depends": ["MASS", "ade4", "ape", "ks", "mgcv", "missForest", "paran", "phytools", "vegan", "viridis"] }, "funspotr": { "name": "funspotr", @@ -63935,7 +64589,7 @@ "name": "funtimes", "version": "9.1", "sha256": "0gz26djl534d42wxspg9hl0ndhzzhkr9d4vp87afqqg9401qcgcz", - "depends": ["dbscan", "Kendall", "lmtest", "mlVAR", "Rdpack", "sandwich", "vars"] + "depends": ["Kendall", "Rdpack", "dbscan", "lmtest", "mlVAR", "sandwich", "vars"] }, "furniture": { "name": "furniture", @@ -63965,7 +64619,7 @@ "name": "fuser", "version": "1.0.1", "sha256": "17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr", - "depends": ["glmnet", "irlba", "Matrix", "Rcpp", "RcppEigen", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppEigen", "glmnet", "irlba"] }, "fusionchartsR": { "name": "fusionchartsR", @@ -63999,8 +64653,8 @@ }, "future": { "name": "future", - "version": "1.33.2", - "sha256": "0rma4h9rjy28n7csn748v9b83m2v5hyh0hgwwckfpbnd5331m9xm", + "version": "1.34.0", + "sha256": "0pgs5n5pqqr3jg71nswjrl5did9bxg0m0z3sn8c1pswb3zyx8faq", "depends": ["digest", "globals", "listenv", "parallelly"] }, "future_apply": { @@ -64023,8 +64677,8 @@ }, "future_mirai": { "name": "future.mirai", - "version": "0.2.1", - "sha256": "1ihi9n9wgxq43cx7cxzzay4j8g19jxhyww1h40rr84qzqdj6nk62", + "version": "0.2.2", + "sha256": "0fq01gzcby7sy51vhq2jdrrvfa14i94jjdf80jwvm9lwmc3p20d8", "depends": ["future", "mirai", "parallelly"] }, "future_tests": { @@ -64089,9 +64743,9 @@ }, "fwlplot": { "name": "fwlplot", - "version": "0.2.0", - "sha256": "1fi2ijfkpxfbwxfcyc5mk2c7mpj6z7lrwm8wlilk2g04y6jmw84l", - "depends": ["data_table", "fixest", "ggplot2"] + "version": "0.3.0", + "sha256": "1pklfvf68lz6wais9zr770kcr2v3cfhc4di2vadr3dinqjl1gzlw", + "depends": ["data_table", "fixest", "tinyplot"] }, "fwsim": { "name": "fwsim", @@ -64101,9 +64755,9 @@ }, "fxTWAPLS": { "name": "fxTWAPLS", - "version": "0.1.2", - "sha256": "1bxrwkf65qw3k6mqvp27lqw6i2r7bdbilnl9406k1nva353gcxxm", - "depends": ["doFuture", "foreach", "future", "geosphere", "ggplot2", "JOPS", "MASS", "progressr"] + "version": "0.1.3", + "sha256": "1i1wv6vpnkfxn6vw2hdi5bh1b1dvq572c7mka4z8rxi2xj52whiy", + "depends": ["JOPS", "MASS", "doFuture", "foreach", "future", "geosphere", "ggplot2", "progressr"] }, "fxl": { "name": "fxl", @@ -64157,13 +64811,13 @@ "name": "gJLS2", "version": "0.2.0", "sha256": "112fyy76ry6g0xinhy09s5vdcd11jw7sivadlx05ali89lm5nigg", - "depends": ["ggplot2", "MASS", "MCMCpack", "moments", "nlme", "plyr", "quantreg"] + "depends": ["MASS", "MCMCpack", "ggplot2", "moments", "nlme", "plyr", "quantreg"] }, "gKRLS": { "name": "gKRLS", "version": "1.0.2", "sha256": "0kkk463mgrypc5vihv9hvj7dsdwv6yvmhxp6iy6ip1k7nqi8xdvf", - "depends": ["Matrix", "mgcv", "mlr3", "R6", "Rcpp", "RcppEigen", "sandwich"] + "depends": ["Matrix", "R6", "Rcpp", "RcppEigen", "mgcv", "mlr3", "sandwich"] }, "gLRTH": { "name": "gLRTH", @@ -64175,37 +64829,37 @@ "name": "gMCP", "version": "0.8-17", "sha256": "0w5qxjyn5z7mygsvrmqk5ab827abhp7v4d8ha8279gjjkfswq5fi", - "depends": ["CommonJavaJars", "JavaGD", "MASS", "Matrix", "multcomp", "mvtnorm", "PolynomF", "rJava", "xlsxjars"] + "depends": ["CommonJavaJars", "JavaGD", "MASS", "Matrix", "PolynomF", "multcomp", "mvtnorm", "rJava", "xlsxjars"] }, "gMCPLite": { "name": "gMCPLite", "version": "0.1.5", "sha256": "1qykizcq42hj6v9fb9hyi59zi1m4hpk10il7why9s9cwyii1m69z", - "depends": ["ggplot2", "MASS", "mvtnorm"] + "depends": ["MASS", "ggplot2", "mvtnorm"] }, "gMOIP": { "name": "gMOIP", "version": "1.5.2", "sha256": "159rqd65g17m2mh93jpkapk4r6n8gmf43vrxhv8aqyggwl0ifdkx", - "depends": ["dplyr", "eaf", "geometry", "ggplot2", "ggrepel", "MASS", "Matrix", "plyr", "png", "purrr", "Rfast", "rgl", "rlang", "sp", "tibble", "tidyr", "tidyselect"] + "depends": ["MASS", "Matrix", "Rfast", "dplyr", "eaf", "geometry", "ggplot2", "ggrepel", "plyr", "png", "purrr", "rgl", "rlang", "sp", "tibble", "tidyr", "tidyselect"] }, "gMWT": { "name": "gMWT", "version": "1.4", "sha256": "1iv7dav6l9gx6vhghcyasdizjsz2f8yzcgkj2i50kpgw74ljg5ia", - "depends": ["clinfun", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "clinfun"] }, "gProfileR": { "name": "gProfileR", "version": "0.7.0", "sha256": "1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k", - "depends": ["plyr", "RCurl"] + "depends": ["RCurl", "plyr"] }, "gRain": { "name": "gRain", "version": "1.4.1", "sha256": "11b40ngfzqqx9pgfbgx7qr63ikccxh1hg9snw55anw32hym2dyfr", - "depends": ["broom", "gRbase", "igraph", "magrittr", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "broom", "gRbase", "igraph", "magrittr"] }, "gRaven": { "name": "gRaven", @@ -64217,19 +64871,19 @@ "name": "gRbase", "version": "2.0.2", "sha256": "15rfl3wib8gq90fy1rr1p7cvdbiqg3qkp6vc71k02difp14hwwin", - "depends": ["igraph", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "igraph"] }, "gRc": { "name": "gRc", "version": "0.5.0", "sha256": "12fz7aiddzc3pxvglin265z30ihcmy18nsw02zg7vb27bz5ldvqp", - "depends": ["gRbase", "igraph", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "gRbase", "igraph"] }, "gRim": { "name": "gRim", - "version": "0.3.2", - "sha256": "1injdhl0xgx9702k4jxdy0wpkf2d4k31m9fi5g9sf572i288lrns", - "depends": ["doBy", "glue", "gRain", "gRbase", "igraph", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen"] + "version": "0.3.3", + "sha256": "126ip5bvqipfrclmclv0gskf2a1d0z7m5965c477q831s3a1wbb8", + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "doBy", "gRain", "gRbase", "glue", "igraph"] }, "gSeg": { "name": "gSeg", @@ -64259,7 +64913,7 @@ "name": "gWQS", "version": "3.0.5", "sha256": "11qs7vxal3br7rg379b5v2w06nvsipk7465c9l5lpifr8g0g561r", - "depends": ["bookdown", "broom", "car", "cowplot", "future", "future_apply", "ggplot2", "ggrepel", "kableExtra", "knitr", "MASS", "Matrix", "nnet", "plotROC", "pscl", "reshape2", "rlist"] + "depends": ["MASS", "Matrix", "bookdown", "broom", "car", "cowplot", "future", "future_apply", "ggplot2", "ggrepel", "kableExtra", "knitr", "nnet", "plotROC", "pscl", "reshape2", "rlist"] }, "gWidgets2": { "name": "gWidgets2", @@ -64281,9 +64935,9 @@ }, "gadget3": { "name": "gadget3", - "version": "0.11-1", - "sha256": "0infyxg05y865k41kk47ylzp0skdr4ypv7x6zg67v8lrwwyx77kh", - "depends": ["digest", "rlang", "TMB"] + "version": "0.12-1", + "sha256": "1jw834v98mwlx7pf78xcqvpqnlrdwl03qm1m4fd5x7yxkn5nhk92", + "depends": ["TMB", "digest", "rlang"] }, "gafit": { "name": "gafit", @@ -64301,7 +64955,7 @@ "name": "gainML", "version": "0.1.0", "sha256": "1mqhrdjdmc2n7dxilxkqn6xq7z0qnxpigw5bbffnjvvsmdamah0n", - "depends": ["fields", "FNN"] + "depends": ["FNN", "fields"] }, "gains": { "name": "gains", @@ -64317,9 +64971,9 @@ }, "galamm": { "name": "galamm", - "version": "0.2.0", - "sha256": "1pyckh5yb9asgk47za9a1791hzkr0w978bf5b7qjca2gw1yymarw", - "depends": ["lme4", "Matrix", "memoise", "mgcv", "nlme", "Rcpp", "RcppEigen", "Rdpack"] + "version": "0.2.1", + "sha256": "1gjz1hmfimld6drildhmlf8xgh6s3p7l6064bsjvp58ggvlmwawk", + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rdpack", "lme4", "memoise", "mgcv", "nlme"] }, "galigor": { "name": "galigor", @@ -64341,21 +64995,21 @@ }, "gam": { "name": "gam", - "version": "1.22-3", - "sha256": "153ig136i3dpy87f8v9f5055x94sl74fnrf5ivpa9fc67f76ikb6", + "version": "1.22-4", + "sha256": "0wy0ia8z9mah8lr4lsbv9sn5z31zbqhrhmk6a74nzfzfyl478hbq", "depends": ["foreach"] }, "gam_hp": { "name": "gam.hp", - "version": "0.0-1", - "sha256": "038ngqjnk7n71s4900qx4nszvf55qrn282psv2bs3lg2jrvzk8cd", + "version": "0.0-2", + "sha256": "0zhnwl533vb094vbn5bxggav3fqh0ahrdrhjliwrgwh2h3bwqpp7", "depends": ["ggplot2", "mgcv"] }, "gamCopula": { "name": "gamCopula", "version": "0.0-7", "sha256": "0zi9g2vxkn1hxc2qyyr1x8p1f9w7fc1j5dmm2mmm333gixkkz9nb", - "depends": ["copula", "doParallel", "foreach", "gsl", "igraph", "MASS", "mgcv", "numDeriv", "VineCopula"] + "depends": ["MASS", "VineCopula", "copula", "doParallel", "foreach", "gsl", "igraph", "mgcv", "numDeriv"] }, "gamRR": { "name": "gamRR", @@ -64421,7 +65075,7 @@ "name": "gamlss", "version": "5.4-22", "sha256": "0bgya6jb462ggqnmlpwdymxqvqbkah15i3aai1xi9496z66r1rh1", - "depends": ["gamlss_data", "gamlss_dist", "MASS", "nlme", "survival"] + "depends": ["MASS", "gamlss_data", "gamlss_dist", "nlme", "survival"] }, "gamlss_add": { "name": "gamlss.add", @@ -64481,7 +65135,7 @@ "name": "gamlss.lasso", "version": "1.0-1", "sha256": "03c8k6hl23ag98dihznfz1h0qc3pwxbnpv58pvmx3xbb3lipfjfb", - "depends": ["gamlss", "glmnet", "lars", "Matrix"] + "depends": ["Matrix", "gamlss", "glmnet", "lars"] }, "gamlss_mx": { "name": "gamlss.mx", @@ -64505,13 +65159,19 @@ "name": "gamlssbssn", "version": "0.1.0", "sha256": "1l8d4qwmq9dklm9imb3cvlncwa6jygf8kg2j1599h1nfhyyhj2vv", - "depends": ["gamlss", "gamlss_dist", "MASS"] + "depends": ["MASS", "gamlss", "gamlss_dist"] + }, + "gamlssx": { + "name": "gamlssx", + "version": "1.0.1", + "sha256": "0lhn0rif1k6978j50cvb3krknn09dzvdln1dh4amz3h2jqsh6434", + "depends": ["gamlss", "gamlss_dist", "nieve"] }, "gamm4": { "name": "gamm4", "version": "0.2-6", "sha256": "128c725y9s07c1m9cvd9hgi9hldrymcs5divd8pw7bdjh9jvdiap", - "depends": ["lme4", "Matrix", "mgcv"] + "depends": ["Matrix", "lme4", "mgcv"] }, "gammSlice": { "name": "gammSlice", @@ -64523,18 +65183,18 @@ "name": "gamma", "version": "1.0.5", "sha256": "1n4jd0xvn6ld5adhhanqxhl7nndj4cqf17jp18s6jmrx7jbc3k5f", - "depends": ["ggplot2", "IsoplotR", "rlang", "rxylib"] + "depends": ["IsoplotR", "ggplot2", "rlang", "rxylib"] }, "gamreg": { "name": "gamreg", "version": "0.3", "sha256": "1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg", - "depends": ["doParallel", "foreach", "glmnet", "Rcpp", "RcppArmadillo", "robustHD"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "glmnet", "robustHD"] }, "gamsel": { "name": "gamsel", - "version": "1.8-2", - "sha256": "1w1z2g0njsfv1ah6w3zw4lcgnaxask5mgykb204jzp6hpnc1a6cb", + "version": "1.8-4", + "sha256": "1w6s19fwrqldacw4qlx3xcq33v0vx332hcyfg2qdcni6yi80fdkg", "depends": ["foreach", "mda"] }, "gamselBayes": { @@ -64547,25 +65207,25 @@ "name": "gamstransfer", "version": "3.0.3", "sha256": "0ashdicnkrvbsddqajhnqrwrpw8y3ikzibm4y3gn5ywg7y3dbp2k", - "depends": ["collections", "R_utils", "R6", "Rcpp"] + "depends": ["R6", "R_utils", "Rcpp", "collections"] }, "ganDataModel": { "name": "ganDataModel", - "version": "1.1.6", - "sha256": "1fff76zh6bn94y57qnxbya3xrshp99pxk5ks2p9i7i4p1f8xvhvd", + "version": "1.1.7", + "sha256": "0zp6nx43qza572nl7wibxamw5ca56b3955z6zfjxq77kwlc8jcl7", "depends": ["Rcpp", "tensorflow"] }, "ganGenerativeData": { "name": "ganGenerativeData", - "version": "2.0.1", - "sha256": "0bs557cv74wcizw7j1xswx8lf3rl6vc3ybdn71854mjrab0sjz85", - "depends": ["httr", "Rcpp", "tensorflow"] + "version": "2.0.2", + "sha256": "0bwka0i9afc9vdw94mbjvqz54w4bfywm84c7mchazr4jwc5p309g", + "depends": ["Rcpp", "httr", "tensorflow"] }, "gap": { "name": "gap", "version": "1.5-3", "sha256": "1kjjnh0s9aicwkd7wsisi4c75y701irigsbzp7y6f2264bcgj6bf", - "depends": ["dplyr", "gap_datasets", "ggplot2", "plotly", "Rdpack"] + "depends": ["Rdpack", "dplyr", "gap_datasets", "ggplot2", "plotly"] }, "gap_datasets": { "name": "gap.datasets", @@ -64583,7 +65243,7 @@ "name": "gapfill", "version": "0.9.6-1", "sha256": "15mrn44v5l4sgxwlyp1rik5mdg7m2s6xxcdigc3sjd1yhxalgw12", - "depends": ["fields", "foreach", "ggplot2", "quantreg", "Rcpp"] + "depends": ["Rcpp", "fields", "foreach", "ggplot2", "quantreg"] }, "gapmap": { "name": "gapmap", @@ -64619,7 +65279,7 @@ "name": "garma", "version": "0.9.13", "sha256": "0h61f29x2261vky4cwmcfwlix7x1yg8qkhgkhiw1aryqmzvwf0lc", - "depends": ["BB", "crayon", "dfoptim", "FKF", "forecast", "GA", "ggplot2", "hypergeo", "ltsa", "lubridate", "nloptr", "pracma", "pso", "Rsolnp", "signal", "tswge", "zoo"] + "depends": ["BB", "FKF", "GA", "Rsolnp", "crayon", "dfoptim", "forecast", "ggplot2", "hypergeo", "ltsa", "lubridate", "nloptr", "pracma", "pso", "signal", "tswge", "zoo"] }, "garray": { "name": "garray", @@ -64629,8 +65289,8 @@ }, "gasanalyzer": { "name": "gasanalyzer", - "version": "0.4.0", - "sha256": "1j46w7ikpzll40yk3vwlq1zysgsnlrf5p01hllp8a9qshxdhl5a6", + "version": "0.4.1", + "sha256": "0cb6xkzfrnxd28dm17r6b57i8l48psqcgx1yaw37csjll35ngxap", "depends": ["jsonify", "stringi", "tibble", "tidyxl", "units", "vctrs", "xml2"] }, "gaselect": { @@ -64641,27 +65301,27 @@ }, "gasfluxes": { "name": "gasfluxes", - "version": "0.6-2", - "sha256": "18yr3331wriddxbnxag3ms6lmx709mhrngv8sxfg0zcm271pkl1r", - "depends": ["data_table", "MASS", "sfsmisc"] + "version": "0.7", + "sha256": "1n2cfm3fa22nbirgkv91qapw5mipsw59m8kwvmb4ljgcslpzjrzp", + "depends": ["MASS", "data_table", "sfsmisc"] }, "gasmodel": { "name": "gasmodel", "version": "0.6.0", "sha256": "16wxv0fkaayxvd5h436wyp9is8y47k7ivim5f9md4g4acy3ca3cb", - "depends": ["abind", "arrangements", "CircStats", "copula", "dplyr", "ggplot2", "Matrix", "mvnfast", "nloptr", "numDeriv", "pracma", "tidyr"] + "depends": ["CircStats", "Matrix", "abind", "arrangements", "copula", "dplyr", "ggplot2", "mvnfast", "nloptr", "numDeriv", "pracma", "tidyr"] }, "gasper": { "name": "gasper", "version": "1.1.6", "sha256": "1ksvgccl4kqnsgrmaxj8daww5f2r9a4p6p2hsnsg3c5iqwnj6i35", - "depends": ["curl", "ggplot2", "httr", "Matrix", "Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "curl", "ggplot2", "httr"] }, "gastempt": { "name": "gastempt", "version": "0.5.5", "sha256": "0pz580nhr9hnpzdi59l00jv34jmy5iyh5skbwslq6gzjdw3jgsf4", - "depends": ["assertthat", "BH", "dplyr", "ggplot2", "nlme", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "shiny", "StanHeaders", "stringr", "tibble", "utf8"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "assertthat", "dplyr", "ggplot2", "nlme", "rstan", "shiny", "stringr", "tibble", "utf8"] }, "gaston": { "name": "gaston", @@ -64673,7 +65333,7 @@ "name": "gateR", "version": "0.1.15", "sha256": "1a818bypdiingv6kmrfmx7ivxybs8k7261vfqlmb4gdl87n71rb2", - "depends": ["fields", "lifecycle", "rlang", "sparr", "SpatialPack", "spatstat_geom", "terra", "tibble"] + "depends": ["SpatialPack", "fields", "lifecycle", "rlang", "sparr", "spatstat_geom", "terra", "tibble"] }, "gatepoints": { "name": "gatepoints", @@ -64685,7 +65345,7 @@ "name": "gatoRs", "version": "1.0.2", "sha256": "0a1z3rjgkz5wxccb5lzmwmskvjlgab3zmznwvjgk2bslda6yzqil", - "depends": ["CoordinateCleaner", "dplyr", "leaflet", "magrittr", "parsedate", "rgbif", "ridigbio", "spatstat_geom", "spThin", "stringr", "terra"] + "depends": ["CoordinateCleaner", "dplyr", "leaflet", "magrittr", "parsedate", "rgbif", "ridigbio", "spThin", "spatstat_geom", "stringr", "terra"] }, "gauseR": { "name": "gauseR", @@ -64733,7 +65393,7 @@ "name": "gb", "version": "2.3.3", "sha256": "0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh", - "depends": ["boot", "KernSmooth"] + "depends": ["KernSmooth", "boot"] }, "gbRd": { "name": "gbRd", @@ -64745,7 +65405,7 @@ "name": "gbeta", "version": "0.1.0", "sha256": "0611rynyybmiq6pj5jvwijdgx3hnr6mscv20lrqzlfplbmvmz0bj", - "depends": ["gsl", "Rcpp", "RcppEigen", "RcppNumerical", "Runuran"] + "depends": ["Rcpp", "RcppEigen", "RcppNumerical", "Runuran", "gsl"] }, "gbfs": { "name": "gbfs", @@ -64761,15 +65421,15 @@ }, "gbm": { "name": "gbm", - "version": "2.1.9", - "sha256": "1r5d8mkg4z14l3743h39r35r0qqjx5p40ixdkcc5iyjab0fzm24x", + "version": "2.2.2", + "sha256": "1x64a0cq9ys49i3z4df0grk506n55i7yj1ljysf9g60cq6xd56h2", "depends": ["lattice", "survival"] }, "gbm_auto": { "name": "gbm.auto", "version": "2023.08.31", "sha256": "14gahb13p9wpsf8a8mb6a7ikas9jcd4hwh4jn4rg1mray4pgj7in", - "depends": ["beepr", "dismo", "dplyr", "gbm", "ggmap", "ggplot2", "ggspatial", "lifecycle", "lubridate", "mapplots", "Metrics", "readr", "sf", "stars", "starsExtra", "stringi", "tidyselect", "viridis"] + "depends": ["Metrics", "beepr", "dismo", "dplyr", "gbm", "ggmap", "ggplot2", "ggspatial", "lifecycle", "lubridate", "mapplots", "readr", "sf", "stars", "starsExtra", "stringi", "tidyselect", "viridis"] }, "gbm2sas": { "name": "gbm2sas", @@ -64787,7 +65447,7 @@ "name": "gbp", "version": "0.1.0.4", "sha256": "0awg724gsfwlb0fjcvw0450qdsk4m8x8is16pj5c8fx6nc8rn8bv", - "depends": ["data_table", "magrittr", "Rcpp", "RcppArmadillo", "rgl"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "magrittr", "rgl"] }, "gbs2ploidy": { "name": "gbs2ploidy", @@ -64823,7 +65483,7 @@ "name": "gcbd", "version": "0.2.6", "sha256": "1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia", - "depends": ["DBI", "lattice", "Matrix", "plyr", "reshape", "RSQLite"] + "depends": ["DBI", "Matrix", "RSQLite", "lattice", "plyr", "reshape"] }, "gcdnet": { "name": "gcdnet", @@ -64859,13 +65519,13 @@ "name": "gcmr", "version": "1.0.3", "sha256": "0m4px1w41226clczzmnzal3hs0qwrvlhhdnkcxj1i7qp358ksxvm", - "depends": ["betareg", "car", "Formula", "lmtest", "nlme", "sandwich", "sp"] + "depends": ["Formula", "betareg", "car", "lmtest", "nlme", "sandwich", "sp"] }, "gconsensus": { "name": "gconsensus", "version": "0.3.2", "sha256": "065i587611nh3fiaxlp88qzd12cjxpbdvxn8pvd99fmk88d809zs", - "depends": ["coda", "MASS", "rjags"] + "depends": ["MASS", "coda", "rjags"] }, "gcookbook": { "name": "gcookbook", @@ -64875,15 +65535,15 @@ }, "gcplyr": { "name": "gcplyr", - "version": "1.9.0", - "sha256": "0j584jh0kqwazgfk12gfbvivqhfgi3gb9hbw55fgv36an4x7q22h", + "version": "1.10.0", + "sha256": "04g8p92aw8ihndlrlxlhvhrqgqv9x6izykpfs8rfn1jc3bisbyyd", "depends": ["dplyr", "rlang", "tidyr"] }, "gcxgclab": { "name": "gcxgclab", "version": "1.0.1", "sha256": "0w6l9d23wbcvj5qzxc1yz20ic58hjkswk7scyjldiv6cbzm89wr1", - "depends": ["dplyr", "ggplot2", "ncdf4", "nilde", "nls_multstart", "ptw", "Rdpack", "zoo"] + "depends": ["Rdpack", "dplyr", "ggplot2", "ncdf4", "nilde", "nls_multstart", "ptw", "zoo"] }, "gdalUtilities": { "name": "gdalUtilities", @@ -64895,13 +65555,13 @@ "name": "gdalcubes", "version": "0.7.0", "sha256": "1bpskiv7pc09pwmh3ghf5l6wswbwlbmwx6sjqlqx7vs8d7gk6972", - "depends": ["BH", "jsonlite", "ncdf4", "Rcpp"] + "depends": ["BH", "Rcpp", "jsonlite", "ncdf4"] }, "gdalraster": { "name": "gdalraster", "version": "1.11.1", "sha256": "0vf28id5yq4f491b25fbmap1yzpzxxkkqmzfln1qc4hxfhbirv1p", - "depends": ["bit64", "Rcpp", "RcppInt64", "xml2"] + "depends": ["Rcpp", "RcppInt64", "bit64", "xml2"] }, "gdata": { "name": "gdata", @@ -64913,7 +65573,7 @@ "name": "gde", "version": "0.2.1", "sha256": "05paf15dn2l7mfzhy3p3k7a2831fj9fwvwgljhcv7wpdj7djdccs", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "httr", "jsonlite", "leaflet", "progress", "R_utils", "readr", "RSQLite", "shiny", "shinycssloaders", "shinyWidgets", "stringr", "XML"] + "depends": ["DT", "RSQLite", "R_utils", "XML", "data_table", "dplyr", "ggplot2", "httr", "jsonlite", "leaflet", "progress", "readr", "shiny", "shinyWidgets", "shinycssloaders", "stringr"] }, "gdi": { "name": "gdi", @@ -64931,13 +65591,13 @@ "name": "gdim", "version": "0.1.0", "sha256": "02q5ynd22yisl3as9hyrg18p9j74lw6p1z3szm1k2ax0r3k04r27", - "depends": ["dplyr", "ggplot2", "irlba", "magrittr", "Matrix", "progress", "rlang", "tibble"] + "depends": ["Matrix", "dplyr", "ggplot2", "irlba", "magrittr", "progress", "rlang", "tibble"] }, "gdistance": { "name": "gdistance", "version": "1.6.4", "sha256": "0awrv10adi31inrgxbb83p73fq05i2xifj2xf16z6mp2lwzgvxba", - "depends": ["igraph", "Matrix", "raster", "sp", "terra"] + "depends": ["Matrix", "igraph", "raster", "sp", "terra"] }, "gdldata": { "name": "gdldata", @@ -64949,13 +65609,13 @@ "name": "gdm", "version": "1.5.0-9.1", "sha256": "10c4fk6pbd946is8h8cr8qblrq6cch5zhlhrxqd8ix5wknm8cqn8", - "depends": ["doParallel", "foreach", "pbapply", "raster", "Rcpp", "reshape2", "vegan"] + "depends": ["Rcpp", "doParallel", "foreach", "pbapply", "raster", "reshape2", "vegan"] }, "gdpc": { "name": "gdpc", "version": "1.1.4", "sha256": "1m54nm5ikarrmlpjnvl70v2xirk5xaqnv3i3pcwy96796ymk5ars", - "depends": ["doParallel", "foreach", "Rcpp", "RcppArmadillo", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "xts", "zoo"] }, "gds": { "name": "gds", @@ -64967,7 +65627,7 @@ "name": "gdtools", "version": "0.3.7", "sha256": "155ky9fdi023b5fjk1gh3607xlgm3hymq232fq03ip2aaywc74nj", - "depends": ["curl", "fontquiver", "gfonts", "htmltools", "Rcpp", "systemfonts"] + "depends": ["Rcpp", "curl", "fontquiver", "gfonts", "htmltools", "systemfonts"] }, "gdxdt": { "name": "gdxdt", @@ -64979,7 +65639,7 @@ "name": "gear", "version": "0.3.4", "sha256": "0ibn2kr0rjj546cbcqhr6x69s25xh7si5fri59055j42g62mdnxy", - "depends": ["autoimage", "optimx", "Rcpp"] + "depends": ["Rcpp", "autoimage", "optimx"] }, "geboes_score": { "name": "geboes.score", @@ -65013,33 +65673,33 @@ }, "geeVerse": { "name": "geeVerse", - "version": "0.1.0", - "sha256": "14yy7qfjql2p6hhm2h5v2j29528085chp84s7q5i9x5x84zpmqvi", - "depends": ["doParallel", "foreach", "mvtnorm", "quantreg", "Rcpp", "RcppEigen"] + "version": "0.2.1", + "sha256": "04hfw7y3bfgngiv5cahx3hckfl1i83x2vjc5vabqqk2nq400c4x5", + "depends": ["Rcpp", "RcppEigen", "doParallel", "foreach", "mvtnorm", "quantreg"] }, "geeasy": { "name": "geeasy", "version": "0.1.2", "sha256": "0hfxryqn5dxpyl0s16ibbg1n8w19wl5ldxa8g437akb760pmsmvl", - "depends": ["geeM", "geepack", "ggplot2", "lme4", "Matrix", "MESS"] + "depends": ["MESS", "Matrix", "geeM", "geepack", "ggplot2", "lme4"] }, "geecure": { "name": "geecure", "version": "1.0-6", "sha256": "0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5", - "depends": ["geepack", "MASS", "Matrix", "survival"] + "depends": ["MASS", "Matrix", "geepack", "survival"] }, "geepack": { "name": "geepack", "version": "1.3.11", "sha256": "0y74allpn9bcc5hlqlr97qb9siig52qvaf1lyd4ffpg72k9z1qi9", - "depends": ["broom", "magrittr", "MASS"] + "depends": ["MASS", "broom", "magrittr"] }, "geesmv": { "name": "geesmv", "version": "1.3", "sha256": "0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w", - "depends": ["gee", "MASS", "matrixcalc", "nlme"] + "depends": ["MASS", "gee", "matrixcalc", "nlme"] }, "geessbin": { "name": "geessbin", @@ -65051,7 +65711,7 @@ "name": "geex", "version": "1.1.1", "sha256": "0hs17vmwgpvv85za32rmnlylp0fbbirb1irxxqkgx3dsffgvpbm1", - "depends": ["lme4", "Matrix", "numDeriv", "rootSolve"] + "depends": ["Matrix", "lme4", "numDeriv", "rootSolve"] }, "geigen": { "name": "geigen", @@ -65063,7 +65723,7 @@ "name": "geiger", "version": "2.0.11", "sha256": "0s9zvqgn30spwggwpr02gzdjg3h4kgqamq37i03i14a3i2ls1ifw", - "depends": ["ape", "coda", "colorspace", "deSolve", "digest", "MASS", "mvtnorm", "ncbit", "phytools", "Rcpp", "subplex"] + "depends": ["MASS", "Rcpp", "ape", "coda", "colorspace", "deSolve", "digest", "mvtnorm", "ncbit", "phytools", "subplex"] }, "gellipsoid": { "name": "gellipsoid", @@ -65087,13 +65747,13 @@ "name": "gems", "version": "1.1.1", "sha256": "174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx", - "depends": ["data_table", "MASS", "msm", "plyr"] + "depends": ["MASS", "data_table", "msm", "plyr"] }, "gemtc": { "name": "gemtc", "version": "1.0-2", "sha256": "01sas647d3s5adkqg96z0hhr9pig275fz896ghnp313p5k3fz90l", - "depends": ["coda", "forcats", "igraph", "meta", "plyr", "Rglpk", "rjags", "truncnorm"] + "depends": ["Rglpk", "coda", "forcats", "igraph", "meta", "plyr", "rjags", "truncnorm"] }, "gen2stage": { "name": "gen2stage", @@ -65105,7 +65765,7 @@ "name": "gen3sis", "version": "1.5.11", "sha256": "07r2x0mwrs1ghsfd0a2zj7m2khwq4pg64xiv3n89zy9w9b6vcyw9", - "depends": ["BH", "gdistance", "Matrix", "raster", "Rcpp", "stringr"] + "depends": ["BH", "Matrix", "Rcpp", "gdistance", "raster", "stringr"] }, "gen5helper": { "name": "gen5helper", @@ -65117,7 +65777,7 @@ "name": "genBaRcode", "version": "1.2.7", "sha256": "1rgx0b3bpqfc75y5x4i714m8xbrgckvg4m9gkqxq0464386s53dd", - "depends": ["ape", "Biostrings", "dplyr", "futile_logger", "future", "future_apply", "ggnetwork", "ggplot2", "ggraph", "ggtree", "igraph", "network", "phangorn", "RColorBrewer", "reshape2", "S4Vectors", "shiny", "ShortRead", "stringdist", "VennDiagram", "visNetwork"] + "depends": ["Biostrings", "RColorBrewer", "S4Vectors", "ShortRead", "VennDiagram", "ape", "dplyr", "futile_logger", "future", "future_apply", "ggnetwork", "ggplot2", "ggraph", "ggtree", "igraph", "network", "phangorn", "reshape2", "shiny", "stringdist", "visNetwork"] }, "genCountR": { "name": "genCountR", @@ -65127,8 +65787,8 @@ }, "genMCMCDiag": { "name": "genMCMCDiag", - "version": "0.2.1", - "sha256": "03vxmsf3vh125a87pchdpnkp5n3sqg44nkrlf8l91jicxa6p6rrx", + "version": "0.2.2", + "sha256": "0vf9r9qc477mdjvi54sh0m67lscb8j6lfc7ikqpd4xnzsd4aklb6", "depends": ["coda", "ggplot2", "knitr", "lifecycle", "mcmcse"] }, "genSEIR": { @@ -65187,9 +65847,9 @@ }, "genderstat": { "name": "genderstat", - "version": "0.1.3", - "sha256": "02g9hhy17m3fdvg6hkl8l2njzys6z3xssdwb094q31kffl987bqx", - "depends": ["dplyr", "ggplot2", "reshape2"] + "version": "0.1.5", + "sha256": "05i89xn1r94q53rnw5njj19nmix2ldywkadvinfc47nn60h6zfgx", + "depends": [] }, "gendist": { "name": "gendist", @@ -65201,13 +65861,13 @@ "name": "geneExpressionFromGEO", "version": "0.9", "sha256": "15dvx2f4nsmw1mgjfpcdcfnx8335fd043xb4hdnqcbjzf9h228bp", - "depends": ["annotate", "Biobase", "BiocManager", "GEOquery", "markdown", "R_utils", "xml2"] + "depends": ["Biobase", "BiocManager", "GEOquery", "R_utils", "annotate", "markdown", "xml2"] }, "geneHapR": { "name": "geneHapR", "version": "1.2.4", "sha256": "1yairrndrggvkiwwamqv3qwjs8sci4jc6k53rqs766n752vsbisz", - "depends": ["ape", "Biostrings", "genetics", "GenomicRanges", "ggplot2", "ggpubr", "IRanges", "lolliplot", "maps", "pegas", "reshape2", "rlang", "rtracklayer", "sf", "shiny", "shinyjs", "stringdist", "stringr", "tibble", "tidyr", "vcfR"] + "depends": ["Biostrings", "GenomicRanges", "IRanges", "ape", "genetics", "ggplot2", "ggpubr", "lolliplot", "maps", "pegas", "reshape2", "rlang", "rtracklayer", "sf", "shiny", "shinyjs", "stringdist", "stringr", "tibble", "tidyr", "vcfR"] }, "geneHummus": { "name": "geneHummus", @@ -65219,7 +65879,7 @@ "name": "geneSLOPE", "version": "0.38.2", "sha256": "08fbrssj03ak6xqm9fmb9v6ir7229qds891088wznvg58k81yslv", - "depends": ["bigmemory", "ggplot2", "SLOPE"] + "depends": ["SLOPE", "bigmemory", "ggplot2"] }, "genekitr": { "name": "genekitr", @@ -65279,7 +65939,7 @@ "name": "geneset", "version": "0.2.7", "sha256": "1fiyrlsy5zqmxdj71w5m0h70ln5b84y7mlhv2j8lad623gpng3l6", - "depends": ["dplyr", "fst", "RCurl", "stringi", "stringr"] + "depends": ["RCurl", "dplyr", "fst", "stringi", "stringr"] }, "genesysr": { "name": "genesysr", @@ -65291,13 +65951,13 @@ "name": "geneticae", "version": "0.4.0", "sha256": "0ka0m4dq8a9bzdk3gi7gj6dnc2a7c4chrzixw2g4qd7md31z33vx", - "depends": ["calibrate", "dplyr", "GGEBiplots", "ggforce", "ggplot2", "MASS", "matrixStats", "missMDA", "pcaMethods", "prettydoc", "reshape2", "rlang", "rrcov", "scales", "tidyr"] + "depends": ["GGEBiplots", "MASS", "calibrate", "dplyr", "ggforce", "ggplot2", "matrixStats", "missMDA", "pcaMethods", "prettydoc", "reshape2", "rlang", "rrcov", "scales", "tidyr"] }, "genetics": { "name": "genetics", "version": "1.3.8.1.3", "sha256": "0lljxvz7nc6y2z303icphar2niir0i407w5cyhy2pwspd9gwkwpy", - "depends": ["combinat", "gdata", "gtools", "MASS", "mvtnorm"] + "depends": ["MASS", "combinat", "gdata", "gtools", "mvtnorm"] }, "genfrn": { "name": "genfrn", @@ -65309,12 +65969,12 @@ "name": "genie", "version": "1.0.5", "sha256": "07w6rf4a3d34j7dwz9zcxshg2sk1cd5v59xs3jxph17c9gga0nlq", - "depends": ["genieclust", "Rcpp"] + "depends": ["Rcpp", "genieclust"] }, "genieBPC": { "name": "genieBPC", - "version": "1.1.1", - "sha256": "1s8qi5i10a3qkpgls2589m6aiyda2k7gbfjmbpkbjw73girkh5ln", + "version": "2.0.1", + "sha256": "02jfa24qjpdn6z25312hs9vgasr6pkfab5apmmsh3yqhq6l4g7jg", "depends": ["cli", "dplyr", "dtplyr", "httr", "jsonlite", "purrr", "rlang", "stringr", "sunburstR", "tibble", "tidyr"] }, "genieclust": { @@ -65327,7 +65987,7 @@ "name": "genio", "version": "1.1.2", "sha256": "0izx8yv8mvnfxdqnqpnp2ldw1hzs6ggxi7jgmjlgxkgmm4vngbgl", - "depends": ["dplyr", "Rcpp", "readr", "tibble"] + "depends": ["Rcpp", "dplyr", "readr", "tibble"] }, "geniusr": { "name": "geniusr", @@ -65339,7 +65999,7 @@ "name": "genlasso", "version": "1.6.1", "sha256": "0bhpsz4qcvnmf09l1j6r94ljrdfxidjrsmggb3q4xvyf2xxnnbfx", - "depends": ["igraph", "Matrix"] + "depends": ["Matrix", "igraph"] }, "genlogis": { "name": "genlogis", @@ -65351,7 +66011,7 @@ "name": "geno2proteo", "version": "0.0.6", "sha256": "1gq8lqwwqvmxqqxwf4kms7dhd1zzz33z37m67q53p4a1j5z5n12s", - "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "R_utils", "RUnit", "S4Vectors"] + "depends": ["BiocGenerics", "GenomicRanges", "IRanges", "RUnit", "R_utils", "S4Vectors"] }, "genoPlotR": { "name": "genoPlotR", @@ -65369,7 +66029,7 @@ "name": "genogeographer", "version": "0.1.19", "sha256": "0q56ysv5333i27iv1gmd9ilbgn3rw8sb9yq7z76gmn1fak5aqci8", - "depends": ["dplyr", "DT", "forcats", "ggplot2", "knitr", "leaflet", "magrittr", "maps", "purrr", "readr", "rio", "rlang", "rmarkdown", "shiny", "shinycssloaders", "shinyjs", "shinyWidgets", "tibble", "tidyr"] + "depends": ["DT", "dplyr", "forcats", "ggplot2", "knitr", "leaflet", "magrittr", "maps", "purrr", "readr", "rio", "rlang", "rmarkdown", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs", "tibble", "tidyr"] }, "genomic_autocorr": { "name": "genomic.autocorr", @@ -65393,7 +66053,7 @@ "name": "genpwr", "version": "1.0.4", "sha256": "0cys4zmfq07g99xywqampvmn8g0a6bjjj368d62q5xki2mi9z649", - "depends": ["ggplot2", "MASS", "nleqslv"] + "depends": ["MASS", "ggplot2", "nleqslv"] }, "genridge": { "name": "genridge", @@ -65405,7 +66065,7 @@ "name": "genscore", "version": "1.0.2.2", "sha256": "1ffwnxh1c2wlad4wh9lkvixly0a19l8fcgpp0vxxby6iwsd2vshf", - "depends": ["mvtnorm", "Rdpack", "stringr", "tmvtnorm"] + "depends": ["Rdpack", "mvtnorm", "stringr", "tmvtnorm"] }, "genset": { "name": "genset", @@ -65417,7 +66077,7 @@ "name": "gensphere", "version": "1.3", "sha256": "0cf1xmwi32x3ga9m5k7a93vdwix84ny7wxb74mddmfvb3m1v4c7g", - "depends": ["geometry", "mvmesh", "rgl", "SimplicialCubature", "SphericalCubature"] + "depends": ["SimplicialCubature", "SphericalCubature", "geometry", "mvmesh", "rgl"] }, "genstab": { "name": "genstab", @@ -65447,19 +66107,19 @@ "name": "geoFKF", "version": "0.1.1", "sha256": "1fwzc32dq3ip0crxlmnqfxqky1jbadvdyfaprsbcxpmyrcs4f3qj", - "depends": ["numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "numDeriv"] }, "geoFourierFDA": { "name": "geoFourierFDA", "version": "0.1.0", "sha256": "1a5ggjyfj5ic9h7fqvy3r7s0i6bmbwk95bf7y3vrmmmj0sxdm1mf", - "depends": ["magrittr", "orthopolynom", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "magrittr", "orthopolynom"] }, "geoGAM": { "name": "geoGAM", "version": "0.1-3", "sha256": "080rls4rbac809hd4ddjsj2ndb2hv6fvwdnh4yl7j1hnfm1xwv64", - "depends": ["grpreg", "MASS", "mboost", "mgcv"] + "depends": ["MASS", "grpreg", "mboost", "mgcv"] }, "geoR": { "name": "geoR", @@ -65499,15 +66159,15 @@ }, "geocausal": { "name": "geocausal", - "version": "0.3.0", - "sha256": "0kbjyk9al54y2k9w96rpchv2gwk5f96g6a536fp4sfbhqlmpc0f3", - "depends": ["data_table", "dplyr", "furrr", "ggplot2", "ggpubr", "latex2exp", "mclust", "progressr", "purrr", "sf", "spatstat_explore", "spatstat_geom", "spatstat_model", "terra", "tidyr", "tidyselect", "tidyterra"] + "version": "0.3.2", + "sha256": "0cz1pzfyygiriwagqlhcwibmr2zakkdcnz9jnkghyw7s9xqvnnd6", + "depends": ["data_table", "dplyr", "furrr", "ggplot2", "ggpubr", "latex2exp", "mclust", "progressr", "purrr", "sf", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_univar", "terra", "tidyr", "tidyselect", "tidyterra"] }, "geocmeans": { "name": "geocmeans", "version": "0.3.4", "sha256": "02h171flg295ixpgl2glav2ij0wbvy7kclazdlldw40461aar5nk", - "depends": ["dplyr", "fclust", "fmsb", "future_apply", "ggplot2", "leaflet", "matrixStats", "plotly", "progressr", "Rcpp", "RcppArmadillo", "Rdpack", "reldist", "reshape2", "sf", "shiny", "spdep", "terra", "tmap"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "dplyr", "fclust", "fmsb", "future_apply", "ggplot2", "leaflet", "matrixStats", "plotly", "progressr", "reldist", "reshape2", "sf", "shiny", "spdep", "terra", "tmap"] }, "geodaData": { "name": "geodaData", @@ -65537,7 +66197,7 @@ "name": "geodiv", "version": "1.1.0", "sha256": "0580q71m71xd0kn9z8l536ypl31gx4fyw6cn1nc03sazrdilkz8r", - "depends": ["dplyr", "e1071", "pracma", "Rcpp", "RcppArmadillo", "rlang", "sf", "spatial", "terra", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "e1071", "pracma", "rlang", "sf", "spatial", "terra", "zoo"] }, "geodrawr": { "name": "geodrawr", @@ -65575,6 +66235,12 @@ "sha256": "0jqqv5agnw071ysrmwz5r2z76f80rzm5bfl5g23gq1mbw85x8z8m", "depends": ["Rcpp", "RcppArmadillo", "sf", "sp"] }, + "geohabnet": { + "name": "geohabnet", + "version": "2.1.3", + "sha256": "16a1qvmlynsvws3kl1l1apds8gxgf4yx1c7z92qcp73kilbmgp3x", + "depends": ["beepr", "config", "easycsv", "future", "future_apply", "geodata", "geosphere", "ggplot2", "igraph", "magrittr", "memoise", "patchwork", "rlang", "rnaturalearth", "stringr", "terra", "viridisLite", "yaml"] + }, "geohashTools": { "name": "geohashTools", "version": "0.3.3", @@ -65597,19 +66263,19 @@ "name": "geojsonio", "version": "0.11.3", "sha256": "0as0lcypj05j1vxkf3f13z4x6crjvgwmy06xrgq7j124f4syns3i", - "depends": ["crul", "geojson", "geojsonsf", "jqr", "jsonlite", "magrittr", "readr", "sf", "sp", "V8"] + "depends": ["V8", "crul", "geojson", "geojsonsf", "jqr", "jsonlite", "magrittr", "readr", "sf", "sp"] }, "geojsonsf": { "name": "geojsonsf", "version": "2.0.3", "sha256": "1la6zfzv14ascwds0bp67d7x3am0v14mylc4b2lyd0nrf93a2p17", - "depends": ["geometries", "jsonify", "rapidjsonr", "Rcpp", "sfheaders"] + "depends": ["Rcpp", "geometries", "jsonify", "rapidjsonr", "sfheaders"] }, "geomander": { "name": "geomander", "version": "2.3.0", "sha256": "1w47ln4vxxlp45rqmr6diglwmyadhrq7n6smbgipznwkfkr975jm", - "depends": ["censable", "cli", "dataverse", "dplyr", "geos", "ggplot2", "magrittr", "Rcpp", "readr", "rlang", "sf", "stringr", "tibble", "tidyr", "tinytiger"] + "depends": ["Rcpp", "censable", "cli", "dataverse", "dplyr", "geos", "ggplot2", "magrittr", "readr", "rlang", "sf", "stringr", "tibble", "tidyr", "tinytiger"] }, "geomapdata": { "name": "geomapdata", @@ -65633,7 +66299,7 @@ "name": "geometa", "version": "0.8-0", "sha256": "14f1g5ijm2hv0cncrddfr8fca9517g0dyrkfgc0k1v301nhlvcn4", - "depends": ["crayon", "httr", "jsonlite", "keyring", "R6", "readr", "XML"] + "depends": ["R6", "XML", "crayon", "httr", "jsonlite", "keyring", "readr"] }, "geometries": { "name": "geometries", @@ -65645,19 +66311,25 @@ "name": "geometry", "version": "0.4.7", "sha256": "0fq1sbjlc02idfsnvily7hgi6zgjvrjh7c57wz166k8vyl2l484n", - "depends": ["linprog", "lpSolve", "magic", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "linprog", "lpSolve", "magic"] + }, + "geommc": { + "name": "geommc", + "version": "0.0.1", + "sha256": "0jc5fm2qrbhdk2dnh00yffjr07j8bg20h5dm0vj6qy1xkq7mrpx0", + "depends": ["Matrix", "Rcpp", "cubature", "magrittr", "matrixcalc", "mcmc"] }, "geomod": { "name": "geomod", "version": "0.1.0", "sha256": "06a211cyhcicy5arpjxiglami56plkm6ybxbzbmjd0z6yn9yyd38", - "depends": ["arm", "caret", "Cubist", "e1071", "kernlab", "nnet", "qrnn", "quantregForest", "randomForest", "ranger", "raster", "rasterVis", "rpart", "sp"] + "depends": ["Cubist", "arm", "caret", "e1071", "kernlab", "nnet", "qrnn", "quantregForest", "randomForest", "ranger", "raster", "rasterVis", "rpart", "sp"] }, "geomorph": { "name": "geomorph", - "version": "4.0.7", - "sha256": "16rqf1g5g3gvzjvjjahs06h00gl3n1vbmk8xzyh0c3rjmgdiz2x3", - "depends": ["ape", "ggplot2", "jpeg", "Matrix", "rgl", "RRPP"] + "version": "4.0.8", + "sha256": "0m8c1y3mi794k7b8zrnkvs098gjmaq3lvp1ds3kxjn7v0ddavd0l", + "depends": ["Matrix", "RRPP", "ape", "ggplot2", "jpeg", "rgl"] }, "geomtextpath": { "name": "geomtextpath", @@ -65667,9 +66339,9 @@ }, "geomultistar": { "name": "geomultistar", - "version": "1.2.1", - "sha256": "00fkrbsi4gw7jkvfwwxnxxq9fbbkl6i2n5wmpzglwiy21y74y6pn", - "depends": ["dplyr", "generics", "purrr", "rlang", "RSQLite", "sf", "tibble", "tidyr", "tidyselect"] + "version": "1.2.2", + "sha256": "0vvk48na7130d8j3gm0c5vgi1riqwkjk314pd03i7b4mw00pcm92", + "depends": ["RSQLite", "dplyr", "generics", "purrr", "rlang", "sf", "tibble", "tidyr", "tidyselect"] }, "geonames": { "name": "geonames", @@ -65681,7 +66353,7 @@ "name": "geonapi", "version": "0.7-2", "sha256": "0n6s9gvg9z8hn3sih0gj35x8zxspqa8h8bml50bhsl5y4gcfihgd", - "depends": ["geometa", "httr", "keyring", "openssl", "plyr", "R6", "XML"] + "depends": ["R6", "XML", "geometa", "httr", "keyring", "openssl", "plyr"] }, "geonetwork": { "name": "geonetwork", @@ -65693,7 +66365,7 @@ "name": "geonode4R", "version": "0.1-1", "sha256": "1pyyknkg9dv58vq8w4pmxd36j8l352zb2jv99skvyg0vn07m6bax", - "depends": ["httr", "keyring", "openssl", "R6", "readr"] + "depends": ["R6", "httr", "keyring", "openssl", "readr"] }, "geoperu": { "name": "geoperu", @@ -65723,7 +66395,7 @@ "name": "geosapi", "version": "0.7-1", "sha256": "0zq02xnzqszmkdj99686g2x91gyc8x16yhkixhpd7frap7zy6h23", - "depends": ["cli", "httr", "keyring", "magrittr", "openssl", "R6", "readr", "xml2"] + "depends": ["R6", "cli", "httr", "keyring", "magrittr", "openssl", "readr", "xml2"] }, "geoscale": { "name": "geoscale", @@ -65741,7 +66413,7 @@ "name": "geosimilarity", "version": "2.2", "sha256": "1mkab3377r04zybqsswakcgqwgby9iwb8bhxkr8s27blxha44jcp", - "depends": ["DescTools", "dplyr", "ggplot2", "ggrepel", "SecDim"] + "depends": ["DescTools", "SecDim", "dplyr", "ggplot2", "ggrepel"] }, "geospark": { "name": "geospark", @@ -65759,19 +66431,19 @@ "name": "geospt", "version": "1.0-4", "sha256": "1fmvrsmh4nfc4g8z9ca5k4c4pm7wy218crhigp58n6i6avvf9scz", - "depends": ["fields", "genalg", "gsl", "gstat", "limSolve", "MASS", "minqa", "plyr", "sgeostat", "sp", "TeachingDemos"] + "depends": ["MASS", "TeachingDemos", "fields", "genalg", "gsl", "gstat", "limSolve", "minqa", "plyr", "sgeostat", "sp"] }, "geosptdb": { "name": "geosptdb", "version": "1.0-1", "sha256": "1n1jvigavcxlbc5wki74lnhax3060i44m1cvkcr664wsjqhx3kl2", - "depends": ["FD", "fields", "geospt", "gsl", "limSolve", "minqa", "sp", "StatMatch"] + "depends": ["FD", "StatMatch", "fields", "geospt", "gsl", "limSolve", "minqa", "sp"] }, "geostan": { "name": "geostan", "version": "0.6.2", "sha256": "078lk4c9igkm3il0yfcv2i64rj1fr3b5qz3d3szly2jh2ba5zdgh", - "depends": ["BH", "ggplot2", "gridExtra", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sf", "signs", "spdep", "StanHeaders", "truncnorm"] + "depends": ["BH", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "gridExtra", "rstan", "rstantools", "sf", "signs", "spdep", "truncnorm"] }, "geostats": { "name": "geostats", @@ -65783,7 +66455,7 @@ "name": "geostatsp", "version": "2.0.6", "sha256": "10xmdgmmd4f67778g02hyqzkk9zj9c0cdfs9cw8py1b413vfclyv", - "depends": ["abind", "Matrix", "numDeriv", "terra"] + "depends": ["Matrix", "abind", "numDeriv", "terra"] }, "geotools": { "name": "geotools", @@ -65791,6 +66463,12 @@ "sha256": "0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd", "depends": [] }, + "geotoolsR": { + "name": "geotoolsR", + "version": "1.2.1", + "sha256": "0chiyvc3f3y45v4ja1jhj4pag54ir18d42qnfd3q8dnyisk8cags", + "depends": ["dplyr", "geoR", "ggplot2", "tidyr"] + }, "geotopbricks": { "name": "geotopbricks", "version": "1.5.8.2", @@ -65821,29 +66499,35 @@ "sha256": "0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm", "depends": ["bitops"] }, + "geppe": { + "name": "geppe", + "version": "1.0", + "sha256": "08d50sg80dj3jazznszs7b0jpb21jp9khjvplx1qgdlpnlljwq4h", + "depends": ["Rfast2"] + }, "gerbil": { "name": "gerbil", "version": "0.1.9", "sha256": "1ra1piza922sigxk61v55dbpkmzha716drmb6m1qxn892vykmm8w", - "depends": ["DescTools", "lattice", "MASS", "mvtnorm", "openxlsx", "pbapply", "truncnorm"] + "depends": ["DescTools", "MASS", "lattice", "mvtnorm", "openxlsx", "pbapply", "truncnorm"] }, "germinationmetrics": { "name": "germinationmetrics", "version": "0.1.8", "sha256": "1lssjs9rp09l9draylrkslb74apizbanacgp00yyxhgxa39dk2g6", - "depends": ["broom", "data_table", "ggplot2", "ggrepel", "gslnls", "mathjaxr", "plyr", "Rdpack"] + "depends": ["Rdpack", "broom", "data_table", "ggplot2", "ggrepel", "gslnls", "mathjaxr", "plyr"] }, "gert": { "name": "gert", - "version": "2.0.1", - "sha256": "14nh7j0xz1s4ngsd5n3hixr534z843a38y57grwqkkh9g21q9mqf", + "version": "2.1.1", + "sha256": "0r59xn1c7axicl137a1l2mq74gzw5m7pi2x69ppyfji83c27q0s2", "depends": ["askpass", "credentials", "openssl", "rstudioapi", "sys", "zip"] }, "gesisdata": { "name": "gesisdata", "version": "0.1.2", "sha256": "1cabgmprwlwn09hd1jd9hvj50bqaarxyajz251l0vv2qb3d5l11a", - "depends": ["dplyr", "foreign", "magrittr", "netstat", "rio", "RSelenium", "stringr"] + "depends": ["RSelenium", "dplyr", "foreign", "magrittr", "netstat", "rio", "stringr"] }, "geslaR": { "name": "geslaR", @@ -65855,7 +66539,7 @@ "name": "gesso", "version": "1.0.2", "sha256": "0i7a927mbll8mlisxb0ic62fvq1wp5v0m69n7zkhcjabkxr7gbn3", - "depends": ["BH", "bigmemory", "dplyr", "Matrix", "Rcpp", "RcppEigen", "RcppThread"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppThread", "bigmemory", "dplyr"] }, "gestalt": { "name": "gestalt", @@ -65925,21 +66609,21 @@ }, "gets": { "name": "gets", - "version": "0.37", - "sha256": "1h7hn8n08sqnygbzyiq9zg11b5i9g6islc72c0qypx4j4wba5z55", + "version": "0.38", + "sha256": "0jwjwlg8r4mgk12iszxyy2nfnmqy75ajal3nzdgb8rn2xa3q35vc", "depends": ["zoo"] }, "getspanel": { "name": "getspanel", "version": "0.2.0", "sha256": "0xccla4w7vc82gqxfm927xzynchn9zi37smnq03rkamn4pf7v4gz", - "depends": ["fastDummies", "gets", "ggplot2", "Matrix", "mvtnorm"] + "depends": ["Matrix", "fastDummies", "gets", "ggplot2", "mvtnorm"] }, "getspres": { "name": "getspres", "version": "0.2.0", "sha256": "190y4qrm1wawp0787zhw3g8h9s2smacvvxbs70pxbhysq4bkzcdd", - "depends": ["colorRamps", "colorspace", "dplyr", "metafor", "plotrix", "RColorBrewer"] + "depends": ["RColorBrewer", "colorRamps", "colorspace", "dplyr", "metafor", "plotrix"] }, "gettz": { "name": "gettz", @@ -65975,37 +66659,25 @@ "name": "gfcanalysis", "version": "1.8.0", "sha256": "0j13y90nyd3qczrkzxwi1wpf5xlh7c0nlsyn8p7z1b4y93v63byc", - "depends": ["animation", "geosphere", "ggplot2", "plyr", "raster", "rasterVis", "RCurl", "sf", "stringr", "terra"] + "depends": ["RCurl", "animation", "geosphere", "ggplot2", "plyr", "raster", "rasterVis", "sf", "stringr", "terra"] }, "gfer": { "name": "gfer", "version": "0.1.12", "sha256": "19iarppqaz05352f3ng01yi7na9p612nxwwwagm2nxy1gxrjz5rh", - "depends": ["circlize", "data_table", "ggplot2", "ggrepel", "googlesheets4", "gsheet", "httr", "jsonlite", "rvest", "scatterpie", "stringi", "tidyr", "V8", "xml2"] + "depends": ["V8", "circlize", "data_table", "ggplot2", "ggrepel", "googlesheets4", "gsheet", "httr", "jsonlite", "rvest", "scatterpie", "stringi", "tidyr", "xml2"] }, "gfiExtremes": { "name": "gfiExtremes", "version": "1.0.1", "sha256": "0iljf63pwwxzj0syvj7p13m6q82y7nf1kq5xpgyczkbrrbb59p7n", - "depends": ["BH", "coda", "doParallel", "foreach", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "coda", "doParallel", "foreach"] }, "gfiUltra": { "name": "gfiUltra", "version": "1.0.0", "sha256": "1n6sp7h0ys92mqixznrs2j8kmban3mx8swrwdpxgxc6vxycky8d8", - "depends": ["lazyeval", "mvtnorm", "SIS"] - }, - "gfilmm": { - "name": "gfilmm", - "version": "2.0.5", - "sha256": "0mn2z4aihz0anpm6d0cpyabhbd88x1cp0wgwxl5hgvkw547818pb", - "depends": ["forcats", "lazyeval", "Matrix", "Rcpp", "RcppEigen", "spatstat", "spatstat_geom"] - }, - "gfilogisreg": { - "name": "gfilogisreg", - "version": "1.0.3", - "sha256": "1x9j2ac7lk2gkcwxkvyc3bj23z5bibhx64lj4nwsgdjq14677502", - "depends": ["BH", "EigenR", "lazyeval", "rcdd", "Rcpp", "RcppArmadillo", "roptim", "spatstat", "spatstat_geom"] + "depends": ["SIS", "lazyeval", "mvtnorm"] }, "gfoRmula": { "name": "gfoRmula", @@ -66059,19 +66731,19 @@ "name": "ggESDA", "version": "0.2.0", "sha256": "0abjjs1syk9w5fqs778njkz3f92kil1617239hzdcjy67hbbf3c0", - "depends": ["dplyr", "ggforce", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "gtools", "magrittr", "prodlim", "R6", "rlang", "RSDA", "stringr", "tibble", "tidyr", "tidyverse", "vctrs"] + "depends": ["R6", "RSDA", "dplyr", "ggforce", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "gtools", "magrittr", "prodlim", "rlang", "stringr", "tibble", "tidyr", "tidyverse", "vctrs"] }, "ggExtra": { "name": "ggExtra", "version": "0.10.1", "sha256": "0b78bnkhjlfa2h3f5iib0hqas8r289vqglfbk71a419rivzfsyb8", - "depends": ["colourpicker", "ggplot2", "gtable", "miniUI", "R6", "scales", "shiny", "shinyjs"] + "depends": ["R6", "colourpicker", "ggplot2", "gtable", "miniUI", "scales", "shiny", "shinyjs"] }, "ggFishPlots": { "name": "ggFishPlots", - "version": "0.2.2", - "sha256": "1zp4g29p15ac0g8cywhsagsxkagvah4xwfhv8j9djkbi7ijdx8fq", - "depends": ["broom", "dplyr", "fishmethods", "ggplot2", "ggrepel", "ggridges", "magrittr", "rlang", "tibble", "tidyr", "tidyselect"] + "version": "0.3.0", + "sha256": "12p3ldbfxp51sqswms9zk6chmi8qy0ncv3l2bh9i6b1xhjcx86b2", + "depends": ["broom", "dplyr", "fishmethods", "ggplot2", "ggrepel", "ggridges", "magrittr", "purrr", "rlang", "scales", "tibble", "tidyr", "tidyselect"] }, "ggHoriPlot": { "name": "ggHoriPlot", @@ -66089,7 +66761,7 @@ "name": "ggPMX", "version": "1.2.11", "sha256": "04381iaa52ljpkbi4sy5xgyiv0vznd2k7vnwvsdyk4qkggxxyqw9", - "depends": ["assertthat", "checkmate", "data_table", "dplyr", "GGally", "ggforce", "ggplot2", "gtable", "knitr", "magrittr", "purrr", "R6", "readr", "rlang", "rmarkdown", "scales", "stringr", "tidyr", "yaml", "zoo"] + "depends": ["GGally", "R6", "assertthat", "checkmate", "data_table", "dplyr", "ggforce", "ggplot2", "gtable", "knitr", "magrittr", "purrr", "readr", "rlang", "rmarkdown", "scales", "stringr", "tidyr", "yaml", "zoo"] }, "ggQC": { "name": "ggQC", @@ -66113,7 +66785,7 @@ "name": "ggResidpanel", "version": "0.3.0", "sha256": "1vsjw229pd36100ix1sgfmk5lb9b0fx3l6pxg1irsfhm2ypbg1ig", - "depends": ["cowplot", "ggplot2", "MASS", "plotly", "qqplotr", "stringr"] + "depends": ["MASS", "cowplot", "ggplot2", "plotly", "qqplotr", "stringr"] }, "ggRtsy": { "name": "ggRtsy", @@ -66173,7 +66845,7 @@ "name": "ggalt", "version": "0.4.0", "sha256": "0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc", - "depends": ["ash", "dplyr", "extrafont", "ggplot2", "gtable", "KernSmooth", "maps", "MASS", "plotly", "proj4", "RColorBrewer", "scales", "tibble"] + "depends": ["KernSmooth", "MASS", "RColorBrewer", "ash", "dplyr", "extrafont", "ggplot2", "gtable", "maps", "plotly", "proj4", "scales", "tibble"] }, "ggamma": { "name": "ggamma", @@ -66219,8 +66891,8 @@ }, "ggblanket": { "name": "ggblanket", - "version": "9.1.1", - "sha256": "1nnb6kx6yl4rdfjib9xp406wb533zwl3wcfv0d8nljq094n8j7hy", + "version": "10.0.0", + "sha256": "1ym4sv692ly1r16hf1cxkm6mjz6djik3hwsw2gj2ydchypkdsq3q", "depends": ["colorspace", "dplyr", "farver", "forcats", "ggplot2", "hms", "labelled", "lubridate", "magrittr", "purrr", "rlang", "scales", "snakecase", "stringr", "tidyr", "tidyselect", "viridisLite"] }, "ggblend": { @@ -66245,7 +66917,7 @@ "name": "ggbrain", "version": "0.8.1", "sha256": "1nicqirp69k0ish7j3mr7zz82w2lj5jcvmn7cbx764r62s5pscvd", - "depends": ["checkmate", "data_table", "dplyr", "ggnewscale", "ggplot2", "ggrepel", "glue", "imager", "Matrix", "patchwork", "Rcpp", "RcppArmadillo", "rlang", "RNifti", "tibble", "tidyr", "tidyselect"] + "depends": ["Matrix", "RNifti", "Rcpp", "RcppArmadillo", "checkmate", "data_table", "dplyr", "ggnewscale", "ggplot2", "ggrepel", "glue", "imager", "patchwork", "rlang", "tibble", "tidyr", "tidyselect"] }, "ggbreak": { "name": "ggbreak", @@ -66275,7 +66947,7 @@ "name": "ggchangepoint", "version": "0.1.0", "sha256": "0brd9z8wj563j2kcx12bz4kyg2ynppxx5cz8k23xli1qijlib98p", - "depends": ["changepoint", "changepoint_np", "dplyr", "ecp", "ggplot2", "Rdpack", "tibble"] + "depends": ["Rdpack", "changepoint", "changepoint_np", "dplyr", "ecp", "ggplot2", "tibble"] }, "ggcharts": { "name": "ggcharts", @@ -66303,8 +66975,8 @@ }, "ggdag": { "name": "ggdag", - "version": "0.2.12", - "sha256": "0q5iwafrhq77wxdc9dj9jl5a0rsj3rz3bjz8qb2yjd5j1qlj2mlx", + "version": "0.2.13", + "sha256": "074n9w1vgzmx677nppjfp4k3wf7rp0yfh9fbyhb3man4gl2w17df", "depends": ["dagitty", "dplyr", "forcats", "ggplot2", "ggraph", "ggrepel", "igraph", "magrittr", "pillar", "purrr", "rlang", "stringr", "tibble", "tidygraph"] }, "ggdark": { @@ -66323,31 +66995,31 @@ "name": "ggdemetra", "version": "0.2.8", "sha256": "18i96jkbc0zm9xgn5250v2316kccr5vcxag2gii7lag7bhj6fq51", - "depends": ["ggplot2", "ggrepel", "gridExtra", "RJDemetra"] + "depends": ["RJDemetra", "ggplot2", "ggrepel", "gridExtra"] }, "ggdendro": { "name": "ggdendro", "version": "0.2.0", "sha256": "0sdayyzvhkbli0ha68mc0f7cgp36njv9ign37d63l21hvd6w6h0r", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "ggdensity": { "name": "ggdensity", "version": "1.0.0", "sha256": "01ym1af6w39zg6xh5mls8kwl4mg0lpjd94j0hm2xrgl39llpwx6r", - "depends": ["ggplot2", "isoband", "MASS", "scales", "tibble", "vctrs"] + "depends": ["MASS", "ggplot2", "isoband", "scales", "tibble", "vctrs"] }, "ggdist": { "name": "ggdist", "version": "3.3.2", "sha256": "1wc3pqnf2r0324jm0vv1872smriv25h0lx0mni7qp93wrf8k0mpn", - "depends": ["cli", "distributional", "ggplot2", "glue", "gtable", "numDeriv", "quadprog", "Rcpp", "rlang", "scales", "tibble", "vctrs", "withr"] + "depends": ["Rcpp", "cli", "distributional", "ggplot2", "glue", "gtable", "numDeriv", "quadprog", "rlang", "scales", "tibble", "vctrs", "withr"] }, "ggdmc": { "name": "ggdmc", "version": "0.2.6.0", "sha256": "1gncv7npl548k3zd41x2gwg5qywn5rp6zb4i7ga78sy77mvi3x92", - "depends": ["coda", "data_table", "ggplot2", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "data_table", "ggplot2", "matrixStats"] }, "gge": { "name": "gge", @@ -66369,8 +67041,8 @@ }, "ggeffects": { "name": "ggeffects", - "version": "1.6.0", - "sha256": "02cpiadigrxbw2qnajc1pkqvkl3hzw0yqidsb8lp67vcsx3czh7z", + "version": "1.7.0", + "sha256": "1pbg6iwnbh7cwdzhb44knnbv70lkcgjzrzwyhdzv28vmyc7qy9cj", "depends": ["insight"] }, "ggenealogy": { @@ -66389,7 +67061,7 @@ "name": "ggfacto", "version": "0.3.0", "sha256": "069qzz2192vq6zsqpq2wqxhj6a26g4mpdbng7ing4ha9xfnp9h7g", - "depends": ["data_table", "dplyr", "FactoMineR", "forcats", "ggforce", "ggiraph", "ggplot2", "ggrepel", "gridExtra", "magrittr", "purrr", "rlang", "stringr", "tabxplor", "tibble", "tidyr", "tidyselect", "vctrs", "withr"] + "depends": ["FactoMineR", "data_table", "dplyr", "forcats", "ggforce", "ggiraph", "ggplot2", "ggrepel", "gridExtra", "magrittr", "purrr", "rlang", "stringr", "tabxplor", "tibble", "tidyr", "tidyselect", "vctrs", "withr"] }, "ggfields": { "name": "ggfields", @@ -66419,13 +67091,13 @@ "name": "ggfocus", "version": "1.0.0", "sha256": "03q0rz7flm8sc8hrlkcm5fz66qiyxb8z8q4bh9dglhw0jc8q1fvb", - "depends": ["dplyr", "ggplot2", "magrittr", "RColorBrewer", "rlang"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "magrittr", "rlang"] }, "ggforce": { "name": "ggforce", "version": "0.4.2", "sha256": "1a2i1rl27yqh8kxjpphwcv05p19l2aw07q9gxl4x8iv8xpkb0if1", - "depends": ["cli", "ggplot2", "gtable", "lifecycle", "MASS", "polyclip", "Rcpp", "RcppEigen", "rlang", "scales", "systemfonts", "tidyselect", "tweenr", "vctrs", "withr"] + "depends": ["MASS", "Rcpp", "RcppEigen", "cli", "ggplot2", "gtable", "lifecycle", "polyclip", "rlang", "scales", "systemfonts", "tidyselect", "tweenr", "vctrs", "withr"] }, "ggformula": { "name": "ggformula", @@ -66441,9 +67113,9 @@ }, "ggfoundry": { "name": "ggfoundry", - "version": "0.2.0", - "sha256": "06nc6866lzb417z2bdcjy2qv799bfgkbkalgrsvx5nc1ggq2vpxf", - "depends": ["ggplot2", "grImport2", "lifecycle", "rlang"] + "version": "0.3.1", + "sha256": "0m7r1845vx3snxadqbg3vxyxsh115h7bi5h3q3x1n4c1nd5y45r7", + "depends": ["cli", "ggplot2", "grImport2", "lifecycle", "rlang"] }, "ggfun": { "name": "ggfun", @@ -66469,6 +67141,12 @@ "sha256": "08s0fhk2kz3ks64nfmdbd8p3swkn62cbw7dpbqgk9ydpmh5gpjbj", "depends": ["ggfittext", "ggplot2", "rlang"] }, + "gggenomes": { + "name": "gggenomes", + "version": "1.0.0", + "sha256": "0f3mkwbxmbszahfwr11big9cwlgp7nwbhfsxxfrhqshmr56ydpiw", + "depends": ["colorspace", "dplyr", "ellipsis", "ggplot2", "jsonlite", "magrittr", "purrr", "readr", "rlang", "scales", "snakecase", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + }, "ggghost": { "name": "ggghost", "version": "0.2.1", @@ -66527,7 +67205,7 @@ "name": "gghilbertstrings", "version": "0.3.3", "sha256": "0b3xp1w6fkkmjh7gihhfkp4npx553a75bvsal3w4j57xa34l8rap", - "depends": ["dplyr", "ggplot2", "lifecycle", "magrittr", "Rcpp", "rlang", "tibble"] + "depends": ["Rcpp", "dplyr", "ggplot2", "lifecycle", "magrittr", "rlang", "tibble"] }, "gghist": { "name": "gghist", @@ -66563,19 +67241,19 @@ "name": "ggip", "version": "0.3.2", "sha256": "0mg3p3lq3afw96ddk89v62jjd8ii7nhdcwlmdnmdxrw6awcmvyhk", - "depends": ["cli", "dplyr", "ggplot2", "ipaddress", "Rcpp", "rlang", "tidyr", "vctrs"] + "depends": ["Rcpp", "cli", "dplyr", "ggplot2", "ipaddress", "rlang", "tidyr", "vctrs"] }, "ggiraph": { "name": "ggiraph", "version": "0.8.10", "sha256": "17vdw9xaizcdf6fcbyhz9l514kk4w4dz9yvikbz9bvfx93a9z5ps", - "depends": ["cli", "ggplot2", "htmltools", "htmlwidgets", "purrr", "Rcpp", "rlang", "systemfonts", "uuid", "vctrs"] + "depends": ["Rcpp", "cli", "ggplot2", "htmltools", "htmlwidgets", "purrr", "rlang", "systemfonts", "uuid", "vctrs"] }, "ggiraphExtra": { "name": "ggiraphExtra", "version": "0.3.0", "sha256": "0q8ppixw5i1hpphmswpw6lvq7gx8rx4gfs2b8d31wbn32ziiv2rk", - "depends": ["dplyr", "ggiraph", "ggplot2", "magrittr", "mgcv", "mycor", "plyr", "ppcor", "purrr", "RColorBrewer", "reshape2", "scales", "sjlabelled", "sjmisc", "stringr", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggiraph", "ggplot2", "magrittr", "mgcv", "mycor", "plyr", "ppcor", "purrr", "reshape2", "scales", "sjlabelled", "sjmisc", "stringr", "tidyr"] }, "ggisotonic": { "name": "ggisotonic", @@ -66597,9 +67275,9 @@ }, "gglgbtq": { "name": "gglgbtq", - "version": "0.1.1", - "sha256": "0z03rckalci6g9cd69mz3b7mz8q5z8313ci0q0qcfpkvfxmrz2py", - "depends": ["ggplot2"] + "version": "0.2.0", + "sha256": "1971cjn3xyn5wf2g9a8in05w3wjpvyql7928nkm3gxw23caczpd1", + "depends": ["ggplot2", "rlang", "tibble"] }, "gglm": { "name": "gglm", @@ -66641,7 +67319,7 @@ "name": "ggmcmc", "version": "1.5.1.1", "sha256": "1y6ya2qihm8h6ds84akhmsxn9c8jriw03wakaqzsmi21agz87n21", - "depends": ["dplyr", "GGally", "ggplot2", "tidyr"] + "depends": ["GGally", "dplyr", "ggplot2", "tidyr"] }, "ggmice": { "name": "ggmice", @@ -66653,7 +67331,7 @@ "name": "ggmix", "version": "0.0.2", "sha256": "158pzmr4vmy2qxmp3nrabjgkg11mrdvl1skzxgwida2is900f7gf", - "depends": ["glmnet", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "glmnet"] }, "ggmosaic": { "name": "ggmosaic", @@ -66693,8 +67371,8 @@ }, "ggnewscale": { "name": "ggnewscale", - "version": "0.4.10", - "sha256": "1j8d512qhdlhfp3hb36d1dqlqlxs0i303mnn31xnq1adcwwibmlz", + "version": "0.5.0", + "sha256": "0bfzqjaxg5r9qzi6hav0m6rcw1cr90h8pwwjklbv930finrxrw5p", "depends": ["ggplot2"] }, "ggnormalviolin": { @@ -66773,18 +67451,18 @@ "name": "ggpicrust2", "version": "1.7.3", "sha256": "0zjlsvzl2f74fvqw4ijnai23qwhlcpgd5p8z9dclnwnsgdbm6hcq", - "depends": ["ALDEx2", "aplot", "circlize", "DESeq2", "dplyr", "edgeR", "GGally", "ggh4x", "ggplot2", "ggprism", "lefser", "limma", "Maaslin2", "metagenomeSeq", "MicrobiomeStat", "patchwork", "readr", "SummarizedExperiment", "tibble", "tidyr"] + "depends": ["ALDEx2", "DESeq2", "GGally", "Maaslin2", "MicrobiomeStat", "SummarizedExperiment", "aplot", "circlize", "dplyr", "edgeR", "ggh4x", "ggplot2", "ggprism", "lefser", "limma", "metagenomeSeq", "patchwork", "readr", "tibble", "tidyr"] }, "ggpie": { "name": "ggpie", "version": "0.2.5", "sha256": "11c431ggrhyxiql1v9qajp568jri6hlp1kgl334j4f7sgyh73ng5", - "depends": ["dplyr", "ggnewscale", "ggplot2", "ggrepel", "magrittr", "RColorBrewer", "rlang", "scales", "stringr", "tibble"] + "depends": ["RColorBrewer", "dplyr", "ggnewscale", "ggplot2", "ggrepel", "magrittr", "rlang", "scales", "stringr", "tibble"] }, "ggplate": { "name": "ggplate", - "version": "0.1.3", - "sha256": "18ibiizxbzyshaxgw2ff639nn36mha5bv6yxa6960wjyx3z78772", + "version": "0.1.4", + "sha256": "0n2c9g6rl5vn5gki43xcc22p8hv2gyj7qr6jdbmllx22ld7zsz43", "depends": ["dplyr", "farver", "forcats", "ggplot2", "purrr", "rlang", "scales", "stringr", "tidyr"] }, "ggplot_multistats": { @@ -66797,13 +67475,13 @@ "name": "ggplot2", "version": "3.5.1", "sha256": "08a72kizg42mdm35170fnpn8l6r4n3j1yvbgiq1k8dlvz4jb8n3w", - "depends": ["cli", "glue", "gtable", "isoband", "lifecycle", "MASS", "mgcv", "rlang", "scales", "tibble", "vctrs", "withr"] + "depends": ["MASS", "cli", "glue", "gtable", "isoband", "lifecycle", "mgcv", "rlang", "scales", "tibble", "vctrs", "withr"] }, "ggplot2_utils": { "name": "ggplot2.utils", - "version": "0.3.1", - "sha256": "0fsardsv77rfm2idynqi5zb3wrqcjyckxxchvj894kgb1qfpa27v", - "depends": ["checkmate", "EnvStats", "ggplot2", "ggpp", "ggstats", "survival"] + "version": "0.3.2", + "sha256": "07svk16j9mc3d1fgkd5zpilnr82f7r40y9nachkp32s2bsg1a29g", + "depends": ["EnvStats", "checkmate", "ggplot2", "ggpp", "ggstats", "survival"] }, "ggplot2movies": { "name": "ggplot2movies", @@ -66821,7 +67499,7 @@ "name": "ggplotgui", "version": "1.0.0", "sha256": "1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0", - "depends": ["ggplot2", "haven", "plotly", "RColorBrewer", "readr", "readxl", "shiny", "stringr"] + "depends": ["RColorBrewer", "ggplot2", "haven", "plotly", "readr", "readxl", "shiny", "stringr"] }, "ggplotify": { "name": "ggplotify", @@ -66837,9 +67515,9 @@ }, "ggpmisc": { "name": "ggpmisc", - "version": "0.5.6", - "sha256": "0w514js5q6xchbbw2x3085d7parwa8nqaj4fvjplhpfah6rya2dv", - "depends": ["confintr", "dplyr", "generics", "ggplot2", "ggpp", "lmodel2", "lubridate", "MASS", "multcomp", "multcompView", "plyr", "polynom", "quantreg", "rlang", "scales", "splus2R", "tibble"] + "version": "0.6.0", + "sha256": "145w1pbwjdahgs06v8lms3ynpqryrrr4v0h8bgsmaqqkq1hjixmi", + "depends": ["MASS", "confintr", "dplyr", "generics", "ggplot2", "ggpp", "lmodel2", "lubridate", "multcomp", "multcompView", "plyr", "polynom", "quantreg", "rlang", "scales", "splus2R", "tibble"] }, "ggpointdensity": { "name": "ggpointdensity", @@ -66873,9 +67551,9 @@ }, "ggpp": { "name": "ggpp", - "version": "0.5.7", - "sha256": "0gd8dbcja4qjwjh414mp2xf8hnjlrp4zm4ac8j59kqxzpwxv8n04", - "depends": ["dplyr", "ggplot2", "glue", "gridExtra", "lubridate", "magrittr", "MASS", "polynom", "rlang", "scales", "stringr", "tibble", "vctrs", "xts", "zoo"] + "version": "0.5.8-1", + "sha256": "1jk3x679rvkj3if14cai99w5sk0nj07rhppwwd7i7a1daal0grh5", + "depends": ["MASS", "dplyr", "ggplot2", "glue", "gridExtra", "lubridate", "magrittr", "polynom", "rlang", "scales", "stringr", "tibble", "vctrs", "xts", "zoo"] }, "ggprism": { "name": "ggprism", @@ -66899,7 +67577,7 @@ "name": "ggquickeda", "version": "0.3.1", "sha256": "00m4qf51q40aknb20mj08n8s2fpym3qfcbcb37mpm2pdbsqgrzan", - "depends": ["colourpicker", "data_table", "dplyr", "DT", "forcats", "Formula", "GGally", "ggbeeswarm", "ggh4x", "ggplot2", "ggpmisc", "ggpubr", "ggrepel", "ggridges", "ggstance", "glue", "gridExtra", "Hmisc", "markdown", "patchwork", "plotly", "quantreg", "rlang", "rms", "RPostgres", "scales", "shiny", "shinyFiles", "shinyjqui", "shinyjs", "stringr", "survival", "survminer", "table1", "tibble", "tidyr", "zoo"] + "depends": ["DT", "Formula", "GGally", "Hmisc", "RPostgres", "colourpicker", "data_table", "dplyr", "forcats", "ggbeeswarm", "ggh4x", "ggplot2", "ggpmisc", "ggpubr", "ggrepel", "ggridges", "ggstance", "glue", "gridExtra", "markdown", "patchwork", "plotly", "quantreg", "rlang", "rms", "scales", "shiny", "shinyFiles", "shinyjqui", "shinyjs", "stringr", "survival", "survminer", "table1", "tibble", "tidyr", "zoo"] }, "ggquiver": { "name": "ggquiver", @@ -66923,7 +67601,7 @@ "name": "ggraph", "version": "2.2.1", "sha256": "1w9snb43wpa2rv16fx5vmh7nqpgkr05iz6flnmlfx3xd0ylzh1a4", - "depends": ["cli", "cpp11", "dplyr", "ggforce", "ggplot2", "ggrepel", "graphlayouts", "igraph", "lifecycle", "MASS", "memoise", "rlang", "scales", "tidygraph", "vctrs", "viridis", "withr"] + "depends": ["MASS", "cli", "cpp11", "dplyr", "ggforce", "ggplot2", "ggrepel", "graphlayouts", "igraph", "lifecycle", "memoise", "rlang", "scales", "tidygraph", "vctrs", "viridis", "withr"] }, "ggraptR": { "name": "ggraptR", @@ -66945,8 +67623,8 @@ }, "ggrcs": { "name": "ggrcs", - "version": "0.3.8", - "sha256": "02zvg802wq7nr4ksm0kngi3ka7jv8rc0xsc6d3wgvkk33vvr2902", + "version": "0.4.0", + "sha256": "0zb97wnhlwvi5kd7q20ah5hk3775c7lx7avp32gq5kj0xx7ck647", "depends": ["cowplot", "ggplot2", "rms", "scales"] }, "ggredist": { @@ -66959,7 +67637,7 @@ "name": "ggrepel", "version": "0.9.5", "sha256": "1alcrw304bn6c2i64rxxjkzk3il19gq30gyj3sb4blradkjh1rni", - "depends": ["ggplot2", "Rcpp", "rlang", "scales", "withr"] + "depends": ["Rcpp", "ggplot2", "rlang", "scales", "withr"] }, "ggridges": { "name": "ggridges", @@ -66993,8 +67671,8 @@ }, "ggsci": { "name": "ggsci", - "version": "3.1.0", - "sha256": "1adybzfkmha5xi85yqnz8cbbr6r3qj86z6yvsfcz8g44wqrb4d2r", + "version": "3.2.0", + "sha256": "0jiwkk2ij1qnsaqr6354wihj057ia1arrfpjpll00x63056fvn21", "depends": ["ggplot2", "scales"] }, "ggscidca": { @@ -67013,7 +67691,7 @@ "name": "ggsector", "version": "1.6.6", "sha256": "0qaf8wl1mmwl3razyif08sh329p9j1jgqc0ls5szqirq3db4315i", - "depends": ["dplyr", "ggplot2", "magrittr", "Matrix", "prettydoc", "rlang", "Seurat", "tibble", "tidyr"] + "depends": ["Matrix", "Seurat", "dplyr", "ggplot2", "magrittr", "prettydoc", "rlang", "tibble", "tidyr"] }, "ggseg": { "name": "ggseg", @@ -67037,7 +67715,7 @@ "name": "ggseqplot", "version": "0.8.4", "sha256": "0h4v5lxwr8rflxmxrv324axz6m1girib6gdh4p3k5hk48ilglwj0", - "depends": ["cli", "colorspace", "dplyr", "forcats", "ggh4x", "ggplot2", "ggrepel", "ggtext", "glue", "haven", "patchwork", "purrr", "Rdpack", "rlang", "tidyr", "TraMineR", "usethis"] + "depends": ["Rdpack", "TraMineR", "cli", "colorspace", "dplyr", "forcats", "ggh4x", "ggplot2", "ggrepel", "ggtext", "glue", "haven", "patchwork", "purrr", "rlang", "tidyr", "usethis"] }, "ggshadow": { "name": "ggshadow", @@ -67057,6 +67735,12 @@ "sha256": "02mjailzyqkdnzky60dgampw2sq6mnn7s66fk0lhy32s8apm280i", "depends": ["ggplot2"] }, + "ggsmc": { + "name": "ggsmc", + "version": "0.1.2.0", + "sha256": "1wgb5ml1bgfi6rddbvm3rfk6di9imyx17iflg8h42hhbvbvm93iy", + "depends": ["gganimate", "ggplot2", "poorman"] + }, "ggsoccer": { "name": "ggsoccer", "version": "0.1.7", @@ -67113,8 +67797,8 @@ }, "ggstatsplot": { "name": "ggstatsplot", - "version": "0.12.3", - "sha256": "0lm48b664nin8f32a3xpqvc95cizi27sls5m4vrymfz3aarcwrxr", + "version": "0.12.4", + "sha256": "07xv8d5yv08wcrmz6abjcfq9vv8h78axsnhgxgz08iswhb7a377a", "depends": ["correlation", "datawizard", "dplyr", "ggcorrplot", "ggplot2", "ggrepel", "ggside", "ggsignif", "glue", "insight", "paletteer", "parameters", "patchwork", "performance", "purrr", "rlang", "statsExpressions", "tidyr"] }, "ggstream": { @@ -67157,7 +67841,7 @@ "name": "ggtern", "version": "3.5.0", "sha256": "0ymly9vdzk7rd4p27m1262bm7fvim989yswgw3mr9y0422dn8awa", - "depends": ["compositions", "ggplot2", "gridExtra", "gtable", "hexbin", "latex2exp", "lattice", "MASS", "plyr", "proto", "rlang", "scales"] + "depends": ["MASS", "compositions", "ggplot2", "gridExtra", "gtable", "hexbin", "latex2exp", "lattice", "plyr", "proto", "rlang", "scales"] }, "ggtext": { "name": "ggtext", @@ -67179,8 +67863,8 @@ }, "ggtibble": { "name": "ggtibble", - "version": "1.0.0", - "sha256": "0mqwcy5gyb2dwnpkjzkyg9b3jy6jh9ck1h8z9ghvfssr2mkd17zz", + "version": "1.0.1", + "sha256": "1f9i81vmdkcahxsxqzwgkrjfqchk3jr14h2w8i5gsyhink271kxj", "depends": ["dplyr", "ggplot2", "glue", "knitr", "purrr", "rlang", "tibble", "tidyr", "vctrs"] }, "ggtikz": { @@ -67209,8 +67893,8 @@ }, "ggupset": { "name": "ggupset", - "version": "0.3.0", - "sha256": "079a1fghhbxhkx42ac0n5chmh07i60m2pkdk76frqbbmwrw7inx4", + "version": "0.4.0", + "sha256": "0cycnnycn1qazy35s4w746zlfraayf109bq40fglklmick6kfwsz", "depends": ["ggplot2", "gtable", "rlang", "scales", "tibble"] }, "ggvenn": { @@ -67235,7 +67919,7 @@ "name": "ggwordcloud", "version": "0.6.2", "sha256": "0zl50rksfxiw3ab1j26w27rypygrr28yysflg507djamnc2371gj", - "depends": ["colorspace", "ggplot2", "gridtext", "png", "Rcpp", "scales"] + "depends": ["Rcpp", "colorspace", "ggplot2", "gridtext", "png", "scales"] }, "ggx": { "name": "ggx", @@ -67251,8 +67935,8 @@ }, "ghapps": { "name": "ghapps", - "version": "1.0.0", - "sha256": "12z234lc7iy8svnm37ybj9ym0zd3jq5q9fng9h7dxdw2p9id7y30", + "version": "1.1.0", + "sha256": "0dv48rd7yw4l927p25x26whh2x2g30b0g4afcx6hzj6mghgg0xyn", "depends": ["gh", "jose", "openssl"] }, "ghclass": { @@ -67277,7 +67961,7 @@ "name": "ghql", "version": "0.1.0", "sha256": "19awg98r2hwwwwrwh0166y8ij1clf58vrf02i8fhhfzddx3an6bz", - "depends": ["crul", "graphql", "jsonlite", "R6"] + "depends": ["R6", "crul", "graphql", "jsonlite"] }, "ghyp": { "name": "ghyp", @@ -67295,13 +67979,13 @@ "name": "giacR", "version": "1.0.1", "sha256": "0y7vcca2im6q70jxsjnf4a7jg66y66g941ad0d7iykw3c2cwx6g4", - "depends": ["chromote", "jsonlite", "pingr", "processx", "R6"] + "depends": ["R6", "chromote", "jsonlite", "pingr", "processx"] }, "gibasa": { "name": "gibasa", - "version": "1.1.0", - "sha256": "1biy8vqvbc3mbf2p8kffpifdagyv7k5p28kdwyp9hgp996lj5pqk", - "depends": ["dplyr", "Matrix", "purrr", "Rcpp", "RcppParallel", "readr", "rlang", "stringi"] + "version": "1.1.1", + "sha256": "1j6k11vq9n9bh8f1sdc14maj88nd5vacl3xq9v54nb2phi55rp72", + "depends": ["Matrix", "Rcpp", "RcppParallel", "dplyr", "purrr", "readr", "rlang", "stringi"] }, "gibble": { "name": "gibble", @@ -67331,7 +68015,7 @@ "name": "gifti", "version": "0.8.0", "sha256": "1gb3x4rln9vayjd9fgzb434mm3dwcqgrvlv6rmh4b39mjfm73sly", - "depends": ["base64enc", "R_utils", "xml2"] + "depends": ["R_utils", "base64enc", "xml2"] }, "gigg": { "name": "gigg", @@ -67347,21 +68031,21 @@ }, "gimme": { "name": "gimme", - "version": "0.7-17", - "sha256": "0pa0mag0w7gxx4ikqs3c3k8g3ppi1fz3qkxmq2vmd48k7fyy7n0x", - "depends": ["data_tree", "igraph", "imputeTS", "lavaan", "MASS", "MIIVsem", "nloptr", "qgraph", "tseries"] + "version": "0.7-18", + "sha256": "16xb0182nh2p2cbr1iw74q1biif240jcyckal3mf6zdq703vgy4j", + "depends": ["MASS", "MIIVsem", "data_tree", "igraph", "imputeTS", "lavaan", "nloptr", "qgraph", "tseries"] }, "gimmeTools": { "name": "gimmeTools", "version": "0.1", "sha256": "1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl", - "depends": ["easycsv", "magrittr", "miniUI", "rhandsontable", "rintrojs", "rstudioapi", "shiny", "shinyjs", "shinyWidgets"] + "depends": ["easycsv", "magrittr", "miniUI", "rhandsontable", "rintrojs", "rstudioapi", "shiny", "shinyWidgets", "shinyjs"] }, "gimms": { "name": "gimms", "version": "1.2.2", "sha256": "0dhvi05mpwyx6cpcyk2nzvgd6c8byd7cmrd9crx83lvfa03smpng", - "depends": ["curl", "Kendall", "ncdf4", "raster", "zyp"] + "depends": ["Kendall", "curl", "ncdf4", "raster", "zyp"] }, "giniVarCI": { "name": "giniVarCI", @@ -67383,8 +68067,8 @@ }, "giscoR": { "name": "giscoR", - "version": "0.5.0", - "sha256": "1cqc2mn4f6g18vb8cng0l11w1glyxk3k6sqsdzla0vbwlxs9d5z0", + "version": "0.5.1", + "sha256": "0j2nqv3l25j39jn6bndj5hafr2k88324jap4zwcx22mxkamb6m8g", "depends": ["countrycode", "geojsonsf", "jsonlite", "rappdirs", "sf"] }, "gistr": { @@ -67433,7 +68117,7 @@ "name": "gitear", "version": "1.0.0", "sha256": "139h19yyi7bpkps2vskdnga43ggpgb9fg8jdr7n8vgadxjamv98p", - "depends": ["dplyr", "httr", "jsonlite", "magrittr", "mockery", "Rcpp", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "dplyr", "httr", "jsonlite", "magrittr", "mockery", "stringr", "tibble", "tidyr"] }, "gitgadget": { "name": "gitgadget", @@ -67455,9 +68139,9 @@ }, "gitignore": { "name": "gitignore", - "version": "0.1.6", - "sha256": "1cjfqbch614w75lxc8pw44aryxgcswbhydd48q10ch128x2gvw5a", - "depends": ["clipr", "clisymbols", "crayon", "curl", "glue", "here", "jsonlite", "purrr", "xfun"] + "version": "0.1.7", + "sha256": "047626a31rksyqcxfkvn1rpyv6gbls0b72blaifmy37nhrmwgykz", + "depends": ["cli", "clipr", "curl", "glue", "here", "jsonlite", "purrr", "xfun"] }, "gitlabr": { "name": "gitlabr", @@ -67505,13 +68189,19 @@ "name": "gkgraphR", "version": "1.0.2", "sha256": "1sb52hhpwm3bq7rn2xdq5vly6z1c5yab9a26xzgj3c5s47vk02pa", - "depends": ["httr", "ISOcodes", "jsonlite"] + "depends": ["ISOcodes", "httr", "jsonlite"] }, "gkmSVM": { "name": "gkmSVM", "version": "0.83.0", "sha256": "1bg9jw4ra76j132lkr0p5m2xlr952fdij1hn6f1v7g687l55m0k5", - "depends": ["kernlab", "Rcpp", "ROCR", "seqinr"] + "depends": ["ROCR", "Rcpp", "kernlab", "seqinr"] + }, + "glam": { + "name": "glam", + "version": "1.0.2", + "sha256": "0fwh6x1y1d7fi0d4qh0vdmlr324zqil91zmi79w2mxs9q1w9a2ws", + "depends": ["gam"] }, "glamlasso": { "name": "glamlasso", @@ -67559,7 +68249,7 @@ "name": "glcm", "version": "1.6.5", "sha256": "13my6y9jqd86cg5n74p4b8mqbdgwnanxx4qf1rrhm5jxf6sa31qm", - "depends": ["raster", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "raster"] }, "gld": { "name": "gld", @@ -67583,7 +68273,7 @@ "name": "glinvci", "version": "1.2.4", "sha256": "050rpdyp3xawkyjxcimjpbvn24677whlfhfmkyxijz7zqnvl7i8p", - "depends": ["ape", "BB", "generics", "lbfgsb3c", "numDeriv", "optimx", "plyr", "rlang"] + "depends": ["BB", "ape", "generics", "lbfgsb3c", "numDeriv", "optimx", "plyr", "rlang"] }, "gllm": { "name": "gllm", @@ -67595,7 +68285,7 @@ "name": "gllvm", "version": "1.4.3", "sha256": "1k3yw1flqzj151kqx8wyh54a7crh62ya700x5n4989ngx5071dv3", - "depends": ["alabama", "fishMod", "MASS", "Matrix", "mgcv", "mvabund", "nloptr", "RcppEigen", "statmod", "TMB"] + "depends": ["MASS", "Matrix", "RcppEigen", "TMB", "alabama", "fishMod", "mgcv", "mvabund", "nloptr", "statmod"] }, "glm_deploy": { "name": "glm.deploy", @@ -67607,7 +68297,7 @@ "name": "glm.predict", "version": "4.3-0", "sha256": "18cs6z6573vq8sdjb4kgz8kahizs9njdbip4cm1dk63ldjjrl0kf", - "depends": ["AER", "dfidx", "lme4", "MASS", "mlogit", "nnet", "survey", "survival", "VGAM"] + "depends": ["AER", "MASS", "VGAM", "dfidx", "lme4", "mlogit", "nnet", "survey", "survival"] }, "glm2": { "name": "glm2", @@ -67641,8 +68331,8 @@ }, "glmertree": { "name": "glmertree", - "version": "0.2-4", - "sha256": "0d7wjn9bqja05d0g8rqy1d5c53h00dcyr08589cwflkbx3yxxg6s", + "version": "0.2-5", + "sha256": "0qwfracqrxs471fmz2rcnaw6kc0b2csldm2n4vfc5jlq1k46fljk", "depends": ["Formula", "lme4", "partykit"] }, "glmglrt": { @@ -67661,13 +68351,13 @@ "name": "glmm", "version": "1.4.4", "sha256": "0v8iill3503piyx3wjxd602hs6hgz9818ipqlvg34963hh4b4ixi", - "depends": ["doParallel", "foreach", "itertools", "Matrix", "mvtnorm", "trust"] + "depends": ["Matrix", "doParallel", "foreach", "itertools", "mvtnorm", "trust"] }, "glmm_hp": { "name": "glmm.hp", "version": "0.1-3", "sha256": "07pqwgqdr2a1mxzh7sca6n0cklic4mmyp3vr6yk0485780ysh0wy", - "depends": ["ggplot2", "lme4", "MuMIn", "vegan"] + "depends": ["MuMIn", "ggplot2", "lme4", "vegan"] }, "glmmEP": { "name": "glmmEP", @@ -67679,7 +68369,7 @@ "name": "glmmLasso", "version": "1.6.3", "sha256": "1b2wkmsmnhmkql0kin56faf64abc6hijrs6dlz8qvwcbqpgbpcig", - "depends": ["Matrix", "minqa", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "minqa"] }, "glmmML": { "name": "glmmML", @@ -67691,43 +68381,43 @@ "name": "glmmPen", "version": "1.5.4.4", "sha256": "0vmgzmdrhkvlm6z80ia7b195zhspi75ks3ha7jnrayxnrrzfvqxb", - "depends": ["BH", "bigmemory", "ggplot2", "lme4", "MASS", "Matrix", "mvtnorm", "ncvreg", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "StanHeaders", "stringr", "survival"] + "depends": ["BH", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "StanHeaders", "bigmemory", "ggplot2", "lme4", "mvtnorm", "ncvreg", "reshape2", "rstan", "rstantools", "stringr", "survival"] }, "glmmSeq": { "name": "glmmSeq", "version": "0.5.5", "sha256": "182pgwqqbgpkcvapkps7ahxa4ppic44j10081q0v9lp2cjdiv4qy", - "depends": ["car", "ggplot2", "ggpubr", "glmmTMB", "lme4", "lmerTest", "MASS", "pbapply", "pbmcapply", "plotly", "qvalue"] + "depends": ["MASS", "car", "ggplot2", "ggpubr", "glmmTMB", "lme4", "lmerTest", "pbapply", "pbmcapply", "plotly", "qvalue"] }, "glmmTMB": { "name": "glmmTMB", "version": "1.1.9", "sha256": "0qw9ww3l506vivs6k8v5cdiv6lf9a32f0d1iq6bizxxh0ywsdmck", - "depends": ["lme4", "Matrix", "mgcv", "nlme", "numDeriv", "RcppEigen", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "lme4", "mgcv", "nlme", "numDeriv"] }, "glmmfields": { "name": "glmmfields", "version": "0.1.8", "sha256": "0nn328dn7fbh3h0wnl4kahwrbq9ddr3hyqq7930raa0abimg8ykq", - "depends": ["assertthat", "BH", "broom", "broom_mixed", "cluster", "dplyr", "forcats", "ggplot2", "loo", "mvtnorm", "nlme", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "StanHeaders", "tibble"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "assertthat", "broom", "broom_mixed", "cluster", "dplyr", "forcats", "ggplot2", "loo", "mvtnorm", "nlme", "reshape2", "rstan", "rstantools", "tibble"] }, "glmmrBase": { "name": "glmmrBase", - "version": "0.8.1", - "sha256": "1dam3dp32s3ybb656sfczba9vlan6bsd9n8x73p4faikfpjgyysb", - "depends": ["BH", "Matrix", "R6", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "SparseChol", "StanHeaders"] + "version": "0.9.2", + "sha256": "162lb0zv5xk25adargc064gd7g13a4k8p6p7npzzmppx5235gnp4", + "depends": ["BH", "Matrix", "R6", "Rcpp", "RcppEigen", "RcppParallel", "SparseChol", "StanHeaders", "rstan", "rstantools"] }, "glmmrOptim": { "name": "glmmrOptim", "version": "0.3.5", "sha256": "0aic2wc1f1qdj2g9g7zsaz4hckrgpy7w293harpjmq9ll3gxpfcz", - "depends": ["BH", "digest", "glmmrBase", "Matrix", "Rcpp", "RcppEigen", "RcppProgress", "rminqa", "SparseChol"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppProgress", "SparseChol", "digest", "glmmrBase", "rminqa"] }, "glmnet": { "name": "glmnet", "version": "4.1-8", "sha256": "1znw1p1mi7nv39l7albcg6sfxj7a1jyjw85hb3ginv870z7fbnqx", - "depends": ["foreach", "Matrix", "Rcpp", "RcppEigen", "shape", "survival"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "foreach", "shape", "survival"] }, "glmnetSE": { "name": "glmnetSE", @@ -67739,7 +68429,7 @@ "name": "glmnetUtils", "version": "1.1.9", "sha256": "0rh07i9j6bxiqcl84d8jnn7dzqdwfdzak7w8bf4j4521r24mwm01", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "glmnetcr": { "name": "glmnetcr", @@ -67749,9 +68439,9 @@ }, "glmnetr": { "name": "glmnetr", - "version": "0.5-1", - "sha256": "03jinkwfz8v7cbp0jj4hhr7sgn71giqin3bxs80hary4vx79vwsy", - "depends": ["aorsf", "DiceKriging", "glmnet", "Matrix", "mlrMBO", "ParamHelpers", "randomForestSRC", "rgenoud", "rpart", "smoof", "survival", "torch", "xgboost"] + "version": "0.5-2", + "sha256": "1iw9xpai55dyz5k80f469i0czcqsa9ws7j13dcdj6m6nlw6fwiac", + "depends": ["DiceKriging", "Matrix", "ParamHelpers", "aorsf", "glmnet", "mlrMBO", "randomForestSRC", "rgenoud", "rpart", "smoof", "survival", "torch", "xgboost"] }, "glmpath": { "name": "glmpath", @@ -67785,9 +68475,9 @@ }, "glmtoolbox": { "name": "glmtoolbox", - "version": "0.1.11", - "sha256": "1d7nc2yr01wp2gjd6jx5i51z3vx5ppc625159l1rxp630d0xxq8f", - "depends": ["Formula", "MASS", "numDeriv", "Rfast", "statmod", "SuppDists"] + "version": "0.1.12", + "sha256": "1nzn5nqicry2687d0nx6dacy0kbl0fzsw2wqwwi07mc12b84m7j9", + "depends": ["Formula", "MASS", "Rfast", "SuppDists", "broom", "numDeriv", "statmod"] }, "glmtrans": { "name": "glmtrans", @@ -67811,13 +68501,13 @@ "name": "glmvsd", "version": "1.5", "sha256": "0im3143xvlsgkknsjnifx9zh7jsdm9bsmgiwrk0r2iil2ns22wgy", - "depends": ["brglm", "glmnet", "MASS", "ncvreg"] + "depends": ["MASS", "brglm", "glmnet", "ncvreg"] }, "glmx": { "name": "glmx", "version": "0.2-0", "sha256": "07fgxyfz0jcp4ks2lpnbifjrnik2vwg1c5wl7m3a290rqsnzv5gx", - "depends": ["Formula", "lmtest", "MASS", "sandwich"] + "depends": ["Formula", "MASS", "lmtest", "sandwich"] }, "glmxdiag": { "name": "glmxdiag", @@ -67827,9 +68517,9 @@ }, "globalKinhom": { "name": "globalKinhom", - "version": "0.1.7", - "sha256": "0xs1s8gp8786w1n69hbxffi7sw9hyhgb8kp3h4q85b1rlrkqsn4p", - "depends": ["spatstat_explore", "spatstat_geom", "spatstat_random"] + "version": "0.1.8", + "sha256": "12y9pc78mw5ry7plb86a4af6lycyn177biqcdrxs1s90qx7fmp4b", + "depends": ["spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_univar"] }, "globalOptTests": { "name": "globalOptTests", @@ -67847,7 +68537,7 @@ "name": "globaltrends", "version": "0.0.14", "sha256": "13alq7vwfa2awg7xk9plna0sygsm65yni0ffkncznfpkhk5ff63q", - "depends": ["DBI", "dbplyr", "dplyr", "forcats", "forecast", "ggplot2", "gtrendsR", "lubridate", "purrr", "rlang", "RSQLite", "stringr", "tibble", "tidyr", "zoo"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "forcats", "forecast", "ggplot2", "gtrendsR", "lubridate", "purrr", "rlang", "stringr", "tibble", "tidyr", "zoo"] }, "globe": { "name": "globe", @@ -67859,7 +68549,7 @@ "name": "glober", "version": "1.0", "sha256": "05syd93995pcvzvrwd8hchs2dgklv627a7pias806vsbs8xbp2vg", - "depends": ["fda", "genlasso", "ggplot2", "Matrix", "plot3D"] + "depends": ["Matrix", "fda", "genlasso", "ggplot2", "plot3D"] }, "glogis": { "name": "glogis", @@ -67889,7 +68579,7 @@ "name": "glow", "version": "0.11.0", "sha256": "1q8zci8jv71xzcxsg9b0h04mx11ykpsh4lnvkgg74zfsrf3sib0f", - "depends": ["ggplot2", "R6", "Rcpp", "RcppEigen", "RcppParallel"] + "depends": ["R6", "Rcpp", "RcppEigen", "RcppParallel", "ggplot2"] }, "glpkAPI": { "name": "glpkAPI", @@ -67929,27 +68619,27 @@ }, "gm": { "name": "gm", - "version": "1.0.2", - "sha256": "1g0frcfk2ybhhz0sixdmj8h3z61acaxs10ybja60q91mxlyix2zx", - "depends": ["base64enc", "glue", "htmltools", "knitr", "magick", "magrittr", "MASS", "rlang", "rstudioapi", "stringr"] + "version": "2.0.0", + "sha256": "0vjq3nj1wv4jy0rqi4f03kq3bdamfw63vncbhfmih063rpf7i69h", + "depends": ["base64enc", "erify", "htmltools"] }, "gmDatabase": { "name": "gmDatabase", "version": "0.5.0", "sha256": "0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2", - "depends": ["DBI", "digest", "foreach", "RMySQL", "shiny"] + "depends": ["DBI", "RMySQL", "digest", "foreach", "shiny"] }, "gmGeostats": { "name": "gmGeostats", "version": "0.11.3", "sha256": "19kf409yhq13689akqz88dj0fq02falbh0j0kkvh0l0vymx4hj7y", - "depends": ["boot", "compositions", "foreach", "gstat", "RColorBrewer", "sp"] + "depends": ["RColorBrewer", "boot", "compositions", "foreach", "gstat", "sp"] }, "gma": { "name": "gma", "version": "1.0", "sha256": "08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi", - "depends": ["car", "MASS", "nlme"] + "depends": ["MASS", "car", "nlme"] }, "gmailr": { "name": "gmailr", @@ -67963,6 +68653,12 @@ "sha256": "0gvpmannzhzxrgihi7fvj2kww637hq3zjvl52f8zp4psjpyd752s", "depends": ["RCurl", "XML"] }, + "gmfamm": { + "name": "gmfamm", + "version": "0.1.0", + "sha256": "0l08x6qajr7ancf1dijayayycbs9p1xir4f78fxgicifszcdak6r", + "depends": ["MASS", "Matrix", "bamlss", "mgcv"] + }, "gmfd": { "name": "gmfd", "version": "1.0.1", @@ -67995,15 +68691,15 @@ }, "gmoTree": { "name": "gmoTree", - "version": "1.0.1", - "sha256": "11fyachzqr4nkf23l5l5f8qdmj7xvlf526p4zf5inc51xdf27dyl", + "version": "1.1.0", + "sha256": "1f8n3j0rzps3pfi4ps71f6jn51mlnvk3chi5khnfqydz4ifhwal5", "depends": ["data_table", "dplyr", "openxlsx", "plyr", "rlang", "rlist", "stringr"] }, "gmodels": { "name": "gmodels", "version": "2.19.1", "sha256": "13c8x7iwyz36qir3ikbvjb5dl6gdh4fh82qdxcpcdinwfhrbhmxv", - "depends": ["gdata", "MASS"] + "depends": ["MASS", "gdata"] }, "gmp": { "name": "gmp", @@ -68019,9 +68715,9 @@ }, "gms": { "name": "gms", - "version": "0.4.0", - "sha256": "1m7bhy4vsz6l09pal9ibjlskmbyjmc29hqwjim1x8yansd5bxpzv", - "depends": ["dplyr", "rlang", "stringr", "yaml"] + "version": "0.31.2", + "sha256": "1mf1pxxi9c62zvz3mnl0s616ps9cjhkm6xm3c2ak25saxmw5kfnv", + "depends": ["dplyr", "filelock", "rlang", "stringr", "withr", "yaml"] }, "gmt": { "name": "gmt", @@ -68033,7 +68729,7 @@ "name": "gmtFD", "version": "0.1.0", "sha256": "0qayzxy2aqikndcmk25m26cjxdqf62d4pdk9aiclhw4acvq9awvz", - "depends": ["doParallel", "fda", "foreach", "GFDmcv", "MASS", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["GFDmcv", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "doParallel", "fda", "foreach"] }, "gmvarkit": { "name": "gmvarkit", @@ -68045,13 +68741,13 @@ "name": "gmvjoint", "version": "0.4.0", "sha256": "1gycj6b51irzkv2rg6vvlanaiar8z54pqwd9qswlrw48wk2q074w", - "depends": ["glmmTMB", "MASS", "mvtnorm", "pracma", "Rcpp", "RcppArmadillo", "statmod", "survival", "xtable"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmmTMB", "mvtnorm", "pracma", "statmod", "survival", "xtable"] }, "gmwmx": { "name": "gmwmx", "version": "1.0.3", "sha256": "1jp3jjg0znvqmir83ygvi1nnws6xs29cfccd79vbk8702k4i9y61", - "depends": ["fs", "longmemo", "ltsa", "Matrix", "Rcpp", "RcppArmadillo", "rjson", "stringi", "wv"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "fs", "longmemo", "ltsa", "rjson", "stringi", "wv"] }, "gnFit": { "name": "gnFit", @@ -68075,7 +68771,7 @@ "name": "gnn", "version": "0.0-4", "sha256": "0kwizsqzrb0q6nailnh6k3mzqwxv0d0phrqn7dp97rkgg2qq1kxa", - "depends": ["copula", "keras", "qrng", "R6", "tensorflow"] + "depends": ["R6", "copula", "keras", "qrng", "tensorflow"] }, "gnomonicM": { "name": "gnomonicM", @@ -68111,7 +68807,7 @@ "name": "go2bigq", "version": "2.0.1", "sha256": "0xz6im5gc214m11w70m83mnas09sql9i0lvbgyfy0qvizn6zhyl3", - "depends": ["gmp", "Rmpfr"] + "depends": ["Rmpfr", "gmp"] }, "goalp": { "name": "goalp", @@ -68123,43 +68819,43 @@ "name": "goat", "version": "1.0", "sha256": "154x643dlh614nasx8q77rksp0q9n19a6qnmc5gki0pxv6ysgyj6", - "depends": ["data_table", "dplyr", "ggplot2", "ggraph", "igraph", "Matrix", "MonoPoly", "pheatmap", "Rcpp", "readxl", "tibble", "tidyr", "tidyselect", "treemap", "vctrs", "writexl"] + "depends": ["Matrix", "MonoPoly", "Rcpp", "data_table", "dplyr", "ggplot2", "ggraph", "igraph", "pheatmap", "readxl", "tibble", "tidyr", "tidyselect", "treemap", "vctrs", "writexl"] }, "goeveg": { "name": "goeveg", "version": "0.7.5", "sha256": "1pdbl044xjganm8y7jg3j877bj1rinsr6k22b5b8ngm2gbdmril3", - "depends": ["fields", "Hmisc", "mgcv", "vegan"] + "depends": ["Hmisc", "fields", "mgcv", "vegan"] }, "gofCopula": { "name": "gofCopula", "version": "0.4-1", "sha256": "17bdrn8xsqjz64caa5wdigkv798i18gc2f9jiin1bz840bqn1abg", - "depends": ["copula", "crayon", "doSNOW", "foreach", "MASS", "numDeriv", "progress", "R_utils", "SparseGrid", "VineCopula", "yarrr"] + "depends": ["MASS", "R_utils", "SparseGrid", "VineCopula", "copula", "crayon", "doSNOW", "foreach", "numDeriv", "progress", "yarrr"] }, "gofar": { "name": "gofar", "version": "0.1", "sha256": "10c1qgmkdhzxk9m2sd0xxww453y9lf5vjsrbmrbzbln91i6svy8j", - "depends": ["glmnet", "magrittr", "MASS", "Rcpp", "RcppArmadillo", "rrpack"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmnet", "magrittr", "rrpack"] }, "gofcat": { "name": "gofcat", "version": "0.1.2", "sha256": "0jkkavws3p336i3gzlkd24q467zd1clfndcpimwc6scy8zh67q9l", - "depends": ["crayon", "epiR", "Matrix", "reshape", "stringr", "VGAM"] + "depends": ["Matrix", "VGAM", "crayon", "epiR", "reshape", "stringr"] }, "gofedf": { "name": "gofedf", "version": "0.1.0", "sha256": "12y6lhrpldj46adn3a7jz4snx79y9xdrzbgr5qa4gjl00w3nx6cn", - "depends": ["CompQuadForm", "glm2", "MASS", "statmod"] + "depends": ["CompQuadForm", "MASS", "glm2", "statmod"] }, "goffda": { "name": "goffda", "version": "0.1.2", "sha256": "0d4w2rz7024j4vky1nynqfanfgp8rvgivl2p6b8l2ws98brlhy24", - "depends": ["fda_usc", "glmnet", "ks", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "fda_usc", "glmnet", "ks"] }, "gofgamma": { "name": "gofgamma", @@ -68183,13 +68879,13 @@ "name": "gogarch", "version": "0.7-5", "sha256": "01ikd7ngzgyrgkr637cxnj5xqmdmsj6szcr9f8wmrxvly0b3qf1i", - "depends": ["fastICA", "fGarch"] + "depends": ["fGarch", "fastICA"] }, "goldfish": { "name": "goldfish", "version": "1.6.8", "sha256": "1c49xmn29c1qvx2rmhyvwy5ql2b4zsk4chrv8bni6lwiprib5d9q", - "depends": ["changepoint", "generics", "ggplot2", "Rcpp", "RcppArmadillo", "rlang", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "changepoint", "generics", "ggplot2", "rlang", "tibble"] }, "golem": { "name": "golem", @@ -68229,9 +68925,9 @@ }, "googleAnalyticsR": { "name": "googleAnalyticsR", - "version": "1.1.0", - "sha256": "0js73jwdsk3bgak61na0sqadjmb74b88rfgi0fxbgafz68xg5rgr", - "depends": ["assertthat", "cli", "dplyr", "googleAuthR", "httr", "jsonlite", "magrittr", "measurementProtocol", "memoise", "purrr", "rlang", "tibble", "tidyr", "usethis", "whisker"] + "version": "1.2.0", + "sha256": "0syqlmrq4l8qnqzh6csfyf075fkfv1bmgglrmgynsbs16f4x195v", + "depends": ["assertthat", "cli", "dplyr", "gargle", "googleAuthR", "httr", "jsonlite", "magrittr", "measurementProtocol", "memoise", "purrr", "rlang", "tibble", "tidyr", "usethis", "whisker"] }, "googleAuthR": { "name": "googleAuthR", @@ -68285,7 +68981,7 @@ "name": "googlePublicData", "version": "0.16.1", "sha256": "15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5", - "depends": ["readxl", "XML"] + "depends": ["XML", "readxl"] }, "googlePubsubR": { "name": "googlePubsubR", @@ -68363,13 +69059,13 @@ "name": "gorica", "version": "0.1.4", "sha256": "1r8dg9wcqxd53zm27mf0554x2zlsclbfmqqwjbkywa3np6gi358y", - "depends": ["bain", "lavaan", "limSolve", "lme4", "MASS", "mvtnorm", "quadprog"] + "depends": ["MASS", "bain", "lavaan", "limSolve", "lme4", "mvtnorm", "quadprog"] }, "gosset": { "name": "gosset", "version": "1.3", "sha256": "0k50vjfrqqkw9anq012pbq861lnq3ihjh310rp12xyvzbzf6d6c7", - "depends": ["BradleyTerry2", "DescTools", "ggparty", "ggplot2", "ggrepel", "partykit", "patchwork", "PlackettLuce", "psychotools", "qvcalc", "tidyr"] + "depends": ["BradleyTerry2", "DescTools", "PlackettLuce", "ggparty", "ggplot2", "ggrepel", "partykit", "patchwork", "psychotools", "qvcalc", "tidyr"] }, "gotop": { "name": "gotop", @@ -68389,6 +69085,12 @@ "sha256": "00ndpp3v6z2497xlhhc92pa7w93qk9x8m6ibswj9dfh978d07028", "depends": ["rmarkdown"] }, + "governor": { + "name": "governor", + "version": "0.1.2", + "sha256": "0prvpab34jr59n9j3xqkapwrd51cm00w47dkvi5f6w414791ayzw", + "depends": [] + }, "govinfoR": { "name": "govinfoR", "version": "0.0.3", @@ -68417,13 +69119,13 @@ "name": "gp", "version": "1.1", "sha256": "0w5wcjzgjajfx29whqkn3xv3v9bn4q0almmmsb7qw79dnbv5c16s", - "depends": ["Rfast", "RNGforGPD"] + "depends": ["RNGforGPD", "Rfast"] }, "gpairs": { "name": "gpairs", "version": "1.3.3", "sha256": "08m1ydrr239vnhjbl47mng3i2w9bqmd8fijrwsraq5ysvn826n27", - "depends": ["barcode", "colorspace", "lattice", "MASS", "vcd"] + "depends": ["MASS", "barcode", "colorspace", "lattice", "vcd"] }, "gpbStat": { "name": "gpbStat", @@ -68433,9 +69135,9 @@ }, "gpboost": { "name": "gpboost", - "version": "1.5.0", - "sha256": "0wmf0vddb9w3sx2lsy9m80d7c52xz6sdmx3fdal8g8n898z1rk8h", - "depends": ["data_table", "Matrix", "R6", "RJSONIO"] + "version": "1.5.1.1", + "sha256": "1qnw64lmiv8yyd69hyxqg7x90y9nxcdbipvb6kzpb34if8x2hqgq", + "depends": ["Matrix", "R6", "RJSONIO", "data_table"] }, "gpg": { "name": "gpg", @@ -68445,8 +69147,8 @@ }, "gpindex": { "name": "gpindex", - "version": "0.6.1", - "sha256": "1xl2hcw3qpqwlg655ajg8snyp41s5cb9kxridysch7fjmyj7iymy", + "version": "0.6.2", + "sha256": "1hif169xsvfvsnbgmad8v9qwq1d6hxvn74zyqkbmic8v3yxifs56", "depends": [] }, "gpk": { @@ -68477,7 +69179,7 @@ "name": "gplots", "version": "3.1.3.1", "sha256": "1whs45axg1vp2p3jjya4aq68bl6vp11g059saj2av0vmyaadxq8s", - "depends": ["caTools", "gtools", "KernSmooth"] + "depends": ["KernSmooth", "caTools", "gtools"] }, "gplsim": { "name": "gplsim", @@ -68495,7 +69197,7 @@ "name": "gprofiler2", "version": "0.2.3", "sha256": "1klmg0zj5kr663dzgfzpy1yn161znmjcjq8pl3rahjh2lwaahbmh", - "depends": ["crosstalk", "dplyr", "ggplot2", "gridExtra", "jsonlite", "plotly", "RCurl", "tidyr", "viridisLite"] + "depends": ["RCurl", "crosstalk", "dplyr", "ggplot2", "gridExtra", "jsonlite", "plotly", "tidyr", "viridisLite"] }, "gps": { "name": "gps", @@ -68519,13 +69221,13 @@ "name": "gptr", "version": "0.6.0", "sha256": "17kf5azrm8xhc26pkv7fsqlfw1430h6024n3nz01kfmjyjqs348m", - "depends": ["jsonlite", "RCurl"] + "depends": ["RCurl", "jsonlite"] }, "gptstudio": { "name": "gptstudio", "version": "0.4.0", "sha256": "0hlmpysw3wlz2nvixbdz2gd9nk290jpfj5jcjidi6cn3skykvkdv", - "depends": ["assertthat", "bslib", "cli", "colorspace", "curl", "fontawesome", "glue", "htmltools", "htmlwidgets", "httr2", "ids", "jsonlite", "magrittr", "purrr", "R6", "rlang", "rstudioapi", "rvest", "shiny", "shiny_i18n", "SSEparser", "stringr", "waiter", "yaml"] + "depends": ["R6", "SSEparser", "assertthat", "bslib", "cli", "colorspace", "curl", "fontawesome", "glue", "htmltools", "htmlwidgets", "httr2", "ids", "jsonlite", "magrittr", "purrr", "rlang", "rstudioapi", "rvest", "shiny", "shiny_i18n", "stringr", "waiter", "yaml"] }, "gptzeror": { "name": "gptzeror", @@ -68537,7 +69239,7 @@ "name": "gpuR", "version": "2.0.6", "sha256": "1z9s3c4lspbm29bp1l2sixlfps04aif70rv1p1db1f1xwk6vw3bn", - "depends": ["BH", "Rcpp", "RcppEigen", "RViennaCL"] + "depends": ["BH", "RViennaCL", "Rcpp", "RcppEigen"] }, "gpx": { "name": "gpx", @@ -68549,7 +69251,7 @@ "name": "gqlr", "version": "0.0.2", "sha256": "0gzhqyrbnz3qjzkr4slryrlfhlaxm474y9fahlj0sb0hvcx68pxj", - "depends": ["graphql", "jsonlite", "magrittr", "pryr", "R6"] + "depends": ["R6", "graphql", "jsonlite", "magrittr", "pryr"] }, "gquad": { "name": "gquad", @@ -68565,9 +69267,9 @@ }, "grImport2": { "name": "grImport2", - "version": "0.3-1", - "sha256": "1lj58z6yc2p6ns27fkgh11ac90bcihi65hf62gxpsylcn5dilsi1", - "depends": ["base64enc", "jpeg", "png", "XML"] + "version": "0.3-3", + "sha256": "11glz1yi76235x3di9r7nny0nfcisk12acc4xsm4m2d9ingjh4pn", + "depends": ["XML", "base64enc", "jpeg", "png"] }, "grPipe": { "name": "grPipe", @@ -68609,7 +69311,7 @@ "name": "grafify", "version": "4.0.1", "sha256": "0349sz0gykm69gf7n54g8snvjb8fkfx4cgfwp8bpvib4r9dbsllp", - "depends": ["car", "emmeans", "ggplot2", "Hmisc", "lme4", "lmerTest", "magrittr", "mgcv", "patchwork", "purrr", "tidyr"] + "depends": ["Hmisc", "car", "emmeans", "ggplot2", "lme4", "lmerTest", "magrittr", "mgcv", "patchwork", "purrr", "tidyr"] }, "grafzahl": { "name": "grafzahl", @@ -68621,7 +69323,7 @@ "name": "grainscape", "version": "0.4.4", "sha256": "0c9ms97xnz7z5r2hhwbw0qpcmknp2wk327z95x751yjvgbps3lkg", - "depends": ["ggplot2", "igraph", "raster", "Rcpp", "sf", "sp"] + "depends": ["Rcpp", "ggplot2", "igraph", "raster", "sf", "sp"] }, "gramEvol": { "name": "gramEvol", @@ -68639,7 +69341,7 @@ "name": "grandR", "version": "0.2.5", "sha256": "1cb8mkckbwkdi3zy108z3yhq3mssshhx1l9yb1j8rhgfg9abirly", - "depends": ["cowplot", "ggplot2", "labeling", "lfc", "MASS", "Matrix", "minpack_lm", "numDeriv", "patchwork", "plyr", "RCurl", "reshape2", "rlang", "scales"] + "depends": ["MASS", "Matrix", "RCurl", "cowplot", "ggplot2", "labeling", "lfc", "minpack_lm", "numDeriv", "patchwork", "plyr", "reshape2", "rlang", "scales"] }, "grangers": { "name": "grangers", @@ -68657,13 +69359,13 @@ "name": "granovaGG", "version": "1.4.1", "sha256": "1w75d878p6izdr88j836vc7753c0mkjj5k3s04f09938gxda8a8w", - "depends": ["dplyr", "ggplot2", "magrittr", "RColorBrewer", "tibble", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "magrittr", "tibble", "tidyr"] }, "grantham": { "name": "grantham", - "version": "0.1.1", - "sha256": "0c7kw7yh5n6mgbplnbdcviwc3r2b321v7s334b0cljz6i3c3cr76", - "depends": ["dplyr", "magrittr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] + "version": "0.1.2", + "sha256": "1bcycvf1sjzwxsmdbscj1q8i7kigy6gx5r202ihb1ilvdi1nmx7l", + "depends": ["dplyr", "tibble", "vctrs"] }, "grapes": { "name": "grapes", @@ -68675,7 +69377,7 @@ "name": "grapesAgri1", "version": "1.1.0", "sha256": "0bsnxk7fqick6y76z6s1kwrg1y8spvg0awmdg5hk37g0f3wxgyas", - "depends": ["agricolae", "corrplot", "desplot", "dplyr", "ggplot2", "ggpubr", "gridGraphics", "gtools", "Hmisc", "kableExtra", "knitr", "magrittr", "PairedData", "pastecs", "RColorBrewer", "Rdpack", "reshape2", "rmarkdown", "shiny", "shinyWidgets", "summarytools"] + "depends": ["Hmisc", "PairedData", "RColorBrewer", "Rdpack", "agricolae", "corrplot", "desplot", "dplyr", "ggplot2", "ggpubr", "gridGraphics", "gtools", "kableExtra", "knitr", "magrittr", "pastecs", "reshape2", "rmarkdown", "shiny", "shinyWidgets", "summarytools"] }, "graph3d": { "name": "graph3d", @@ -68687,13 +69389,13 @@ "name": "graph4lg", "version": "1.8.0", "sha256": "07a109jjn1s36x1hpb1zvgb2wq41f11l8cv3car1lr6lw5g3rr3x", - "depends": ["adegenet", "ecodist", "foreign", "gdistance", "ggplot2", "hierfstat", "igraph", "MASS", "Matrix", "pegas", "rappdirs", "raster", "Rdpack", "sf", "sp", "spatstat_geom", "spatstat_linnet", "stringr", "tidyr", "vegan"] + "depends": ["MASS", "Matrix", "Rdpack", "adegenet", "ecodist", "foreign", "gdistance", "ggplot2", "hierfstat", "igraph", "pegas", "rappdirs", "raster", "sf", "sp", "spatstat_geom", "spatstat_linnet", "stringr", "tidyr", "vegan"] }, "graphPAF": { "name": "graphPAF", "version": "2.0.0", "sha256": "0m6v796hwxdv7nan3157x7b8xpph605ihj6gnmlh3v1p95dygsy7", - "depends": ["boot", "dplyr", "ggplot2", "ggrepel", "gridExtra", "gtools", "madness", "MASS", "reshape2", "survival"] + "depends": ["MASS", "boot", "dplyr", "ggplot2", "ggrepel", "gridExtra", "gtools", "madness", "reshape2", "survival"] }, "graphTweets": { "name": "graphTweets", @@ -68729,43 +69431,49 @@ "name": "graphicalExtremes", "version": "0.3.2", "sha256": "18gyfynx9rd06168vv1qxa8hg7ibwv0h2mx1ppizrnrl7ciwwis1", - "depends": ["corpcor", "CVXR", "edmcr", "glassoFast", "glmnet", "igraph", "mvtnorm", "osqp", "Rdpack"] + "depends": ["CVXR", "Rdpack", "corpcor", "edmcr", "glassoFast", "glmnet", "igraph", "mvtnorm", "osqp"] + }, + "graphicalMCP": { + "name": "graphicalMCP", + "version": "0.2.5", + "sha256": "0bs4d1fz6l2rwssh8wq5sakkl478lr6vsx6lb1jz8qnryk6cb3wy", + "depends": ["matrixStats", "mvtnorm"] }, "graphicalVAR": { "name": "graphicalVAR", "version": "0.3.4", "sha256": "1p5x77ck3prs8782kv176qq9d5ngw3zz3w6qg7aq5658pwc87gd3", - "depends": ["dplyr", "glasso", "glmnet", "igraph", "Matrix", "mvtnorm", "qgraph", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr", "glasso", "glmnet", "igraph", "mvtnorm", "qgraph", "rlang"] }, "graphkernels": { "name": "graphkernels", "version": "1.6.1", "sha256": "1fwl5a13mdmia374zas0vvd4dlfnp4in9gj42c0iq01icy1wq0la", - "depends": ["igraph", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "igraph"] }, "graphlayouts": { "name": "graphlayouts", "version": "1.1.1", "sha256": "009q5y46lbizdabbb6a61xlfa3g5lf3nd9w42709lcxi0ad4bhkv", - "depends": ["igraph", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "igraph"] }, "graphon": { "name": "graphon", "version": "0.3.5", "sha256": "1x61pdsb3s1vi1iiy9pjq0iz0m5j5b6q3rqhwvx9kvmg4r8yifpv", - "depends": ["Rdpack", "ROptSpace"] + "depends": ["ROptSpace", "Rdpack"] }, "graphql": { "name": "graphql", "version": "1.5.1", "sha256": "10zpibqh1vsin60pl5dnk4z2kzrfc3aqrhijcn36zq7f97629wv8", - "depends": ["jsonlite", "Rcpp"] + "depends": ["Rcpp", "jsonlite"] }, "graphsim": { "name": "graphsim", "version": "1.0.3", "sha256": "16djk5zm2pnvfyb2783rdyi6a0gspm23br7xxgb2c8wfd9gf430n", - "depends": ["gplots", "igraph", "Matrix", "matrixcalc", "mvtnorm"] + "depends": ["Matrix", "gplots", "igraph", "matrixcalc", "mvtnorm"] }, "graposas": { "name": "graposas", @@ -68787,8 +69495,8 @@ }, "gratia": { "name": "gratia", - "version": "0.9.0", - "sha256": "1hkfaw2vwm4dw73fn4glkwnhvbf2wc3iyz5979rsfabn5i6g91br", + "version": "0.9.2", + "sha256": "0jjjncs5c3zd3jlxk5ywkg31lhxafdj5b58k664yd29193f2w3m0", "depends": ["cli", "dplyr", "ggokabeito", "ggplot2", "lifecycle", "mgcv", "mvnfast", "nlme", "patchwork", "pillar", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs", "withr"] }, "graticule": { @@ -68801,7 +69509,7 @@ "name": "gratis", "version": "1.0.7", "sha256": "0y9gblkcn145r8kx4447waqwc59iibm6nlmdykf6vrwn1y5vssa3", - "depends": ["doRNG", "dplyr", "feasts", "fGarch", "foreach", "forecast", "GA", "generics", "magrittr", "mvtnorm", "polynom", "purrr", "shiny", "tibble", "tsfeatures", "tsibble"] + "depends": ["GA", "doRNG", "dplyr", "fGarch", "feasts", "foreach", "forecast", "generics", "magrittr", "mvtnorm", "polynom", "purrr", "shiny", "tibble", "tsfeatures", "tsibble"] }, "grattan": { "name": "grattan", @@ -68819,13 +69527,13 @@ "name": "gravitas", "version": "0.1.3", "sha256": "11n85bdmigqasbq8c1amj1k7manfvs3gnax2ihsf2vp56s9c463p", - "depends": ["dplyr", "ggplot2", "ggridges", "ineq", "lubridate", "lvplot", "magrittr", "RColorBrewer", "rlang", "shiny", "stringr", "tibble", "tidyr", "tsibble"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggridges", "ineq", "lubridate", "lvplot", "magrittr", "rlang", "shiny", "stringr", "tibble", "tidyr", "tsibble"] }, "gravity": { "name": "gravity", "version": "1.1", "sha256": "05kkprv63x9m715yv9kx2k70bqnkacc72zr0aljcj0ry10nl40c6", - "depends": ["censReg", "dplyr", "glm2", "lmtest", "magrittr", "MASS", "multiwayvcov", "purrr", "Rdpack", "rlang", "sandwich", "survival", "tibble", "tidyr"] + "depends": ["MASS", "Rdpack", "censReg", "dplyr", "glm2", "lmtest", "magrittr", "multiwayvcov", "purrr", "rlang", "sandwich", "survival", "tibble", "tidyr"] }, "gravmagsubs": { "name": "gravmagsubs", @@ -68849,7 +69557,7 @@ "name": "greed", "version": "0.6.1", "sha256": "05p24991s97h0hmvv88s3hca9b50384hm6qm771dqznqs5m4ggrq", - "depends": ["cba", "cli", "future", "ggplot2", "gridExtra", "gtable", "listenv", "Matrix", "Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "cba", "cli", "future", "ggplot2", "gridExtra", "gtable", "listenv"] }, "greekLetters": { "name": "greekLetters", @@ -68861,7 +69569,7 @@ "name": "greeks", "version": "1.4.2", "sha256": "11ps312r6nhda5a2d7mjxzjnlvfj2kz31hyvnfngfpwdg3ndw1hr", - "depends": ["dqrng", "ggplot2", "magrittr", "plotly", "Rcpp", "shiny", "tibble", "tidyr"] + "depends": ["Rcpp", "dqrng", "ggplot2", "magrittr", "plotly", "shiny", "tibble", "tidyr"] }, "greenclust": { "name": "greenclust", @@ -68873,7 +69581,7 @@ "name": "greencrab.toolkit", "version": "0.2", "sha256": "11lrbjm91m2lbgr0wdy84mal4qxs9x0bmniaijxpw9fdwrkqq0aw", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "gregRy": { "name": "gregRy", @@ -68891,13 +69599,13 @@ "name": "greport", "version": "0.7-4", "sha256": "1zyvw3npqz20mlfvmlrz742xxsigs21srn2df9yyjap93g7wqzy1", - "depends": ["data_table", "Formula", "ggplot2", "Hmisc", "lattice", "latticeExtra", "rms", "survival"] + "depends": ["Formula", "Hmisc", "data_table", "ggplot2", "lattice", "latticeExtra", "rms", "survival"] }, "greta": { "name": "greta", "version": "0.4.5", "sha256": "0ky2d0i2s768na50940b733rr1fmmbpkdw1a8r21wbr5h43n8xf2", - "depends": ["abind", "callr", "cli", "coda", "future", "glue", "parallelly", "progress", "R6", "reticulate", "tensorflow", "yesno"] + "depends": ["R6", "abind", "callr", "cli", "coda", "future", "glue", "parallelly", "progress", "reticulate", "tensorflow", "yesno"] }, "greta_dynamics": { "name": "greta.dynamics", @@ -68931,15 +69639,15 @@ }, "greybox": { "name": "greybox", - "version": "2.0.0", - "sha256": "14624pgp02ajlhicq29683j34z2ap6xcjy71f3qbm5nq96w975f8", - "depends": ["generics", "nloptr", "pracma", "Rcpp", "statmod", "texreg", "xtable", "zoo"] + "version": "2.0.1", + "sha256": "053id2kd7q4ydxlrg6yi39y72idicp0cjgrhvmnwyv6zh2jd3ahk", + "depends": ["Rcpp", "generics", "nloptr", "pracma", "statmod", "texreg", "xtable", "zoo"] }, "grf": { "name": "grf", "version": "2.3.2", "sha256": "0za2c9hlvp1s2h25vr6f0qlw92r9wp0vbmfdsp38q190drpjnff0", - "depends": ["DiceKriging", "lmtest", "Matrix", "Rcpp", "RcppEigen", "sandwich"] + "depends": ["DiceKriging", "Matrix", "Rcpp", "RcppEigen", "lmtest", "sandwich"] }, "gridBase": { "name": "gridBase", @@ -68981,7 +69689,7 @@ "name": "gridGraphviz", "version": "0.3-1", "sha256": "0yzy7w4bk3rn9yjqy06gzkcs0dla3n49z3v1z0mjikg8cd97d5ni", - "depends": ["graph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph"] }, "gridOT": { "name": "gridOT", @@ -68993,7 +69701,7 @@ "name": "gridSVG", "version": "1.7-5", "sha256": "1p8qnx9q96bni39x44l40rgcdi9r440zbipdfvkbs2paysx6mkr5", - "depends": ["jsonlite", "XML"] + "depends": ["XML", "jsonlite"] }, "gridpattern": { "name": "gridpattern", @@ -69017,7 +69725,7 @@ "name": "gridtext", "version": "0.1.5", "sha256": "0f7i2qb8fawi8agy2iz2c173kfwj7cbb5ikjix64nmzqc5j7363d", - "depends": ["curl", "jpeg", "markdown", "png", "Rcpp", "rlang", "stringr", "xml2"] + "depends": ["Rcpp", "curl", "jpeg", "markdown", "png", "rlang", "stringr", "xml2"] }, "gripp": { "name": "gripp", @@ -69047,7 +69755,7 @@ "name": "grobblR", "version": "0.2.1", "sha256": "1l1msh900kmbbszn1f9vfdix4a6180lvs3gfidp9pgkvi2gv2g01", - "depends": ["dplyr", "ggplot2", "glue", "gridExtra", "magrittr", "png", "purrr", "RCurl", "stringr", "tibble"] + "depends": ["RCurl", "dplyr", "ggplot2", "glue", "gridExtra", "magrittr", "png", "purrr", "stringr", "tibble"] }, "groc": { "name": "groc", @@ -69075,15 +69783,15 @@ }, "groupTesting": { "name": "groupTesting", - "version": "1.1.0", - "sha256": "06cd6w5ysh0bi7mkvra4mzlfdpfqa40im8f5krp4cbd3nkjskdif", - "depends": ["pracma"] + "version": "1.3.0", + "sha256": "10scrwi5g2i4g32wfksfhmmbhiddcnj4khh7ls32kx2m4lhmll53", + "depends": ["binGroup2", "pracma"] }, "groupWQS": { "name": "groupWQS", "version": "0.0.3", "sha256": "1c5yrsfgkhbg1fcjbrilfmf0phjry5z34536yfizc8wbc7mmmj0c", - "depends": ["glm2", "MASS", "rjags", "Rsolnp"] + "depends": ["MASS", "Rsolnp", "glm2", "rjags"] }, "groupdata2": { "name": "groupdata2", @@ -69095,7 +69803,7 @@ "name": "groupedSurv", "version": "1.0.5.1", "sha256": "16qyvd8k7wdg0iafs5gxljx464nd79kwdl7g7g6hvhrhr621mgyq", - "depends": ["BH", "doParallel", "foreach", "qvalue", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "doParallel", "foreach", "qvalue"] }, "groupr": { "name": "groupr", @@ -69131,7 +69839,7 @@ "name": "growfunctions", "version": "0.16", "sha256": "1v1sawv9fbb6lw4ynjdkj02z8rv5k8pkw55wmg2ws3jisy3xrcm7", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "reshape2", "spam"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "reshape2", "spam"] }, "growth": { "name": "growth", @@ -69141,15 +69849,15 @@ }, "growthPheno": { "name": "growthPheno", - "version": "2.1.24", - "sha256": "0cwdxd47jpgvr9i7xj7hibaa8l8n7gm91i3qv5ikp9p2y93qwbzs", - "depends": ["dae", "GGally", "ggplot2", "Hmisc", "JOPS", "RColorBrewer", "readxl", "reshape", "stringi"] + "version": "2.1.25", + "sha256": "1bz1411ka1pghaa67ad0jkdzykadd64wzn8g37gp7z8zm1ablhzh", + "depends": ["GGally", "Hmisc", "JOPS", "RColorBrewer", "dae", "ggplot2", "readxl", "reshape", "stringi"] }, "growthcleanr": { "name": "growthcleanr", "version": "2.2.0", "sha256": "0wlpaqjw44xa7z95ngiihgvmcrif6d2j7mfzjlzjgc04sjsb6y1v", - "depends": ["data_table", "doParallel", "dplyr", "foreach", "labelled", "magrittr", "plyr", "R_utils", "tidyr"] + "depends": ["R_utils", "data_table", "doParallel", "dplyr", "foreach", "labelled", "magrittr", "plyr", "tidyr"] }, "growthcurver": { "name": "growthcurver", @@ -69167,19 +69875,19 @@ "name": "growthrate", "version": "1.3", "sha256": "1ak3yqlm7dnkdjlmikwa57qnf7yd9n1ixz36gv3shr252750x9cd", - "depends": ["clime", "Matrix", "mvtnorm"] + "depends": ["Matrix", "clime", "mvtnorm"] }, "growthrates": { "name": "growthrates", "version": "0.8.4", "sha256": "04q8psz4fiibjj0pl6n7wkq83qn1aizzixww8gqdxzzsq6kay81q", - "depends": ["deSolve", "FME", "lattice"] + "depends": ["FME", "deSolve", "lattice"] }, "grpCox": { "name": "grpCox", "version": "1.0.2", "sha256": "02x98zmaa7f73qv62wzr0vyyci7kcx7mmyw7cm3inlyphlkywvlw", - "depends": ["colorspace", "MASS", "Matrix", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "colorspace"] }, "grpSLOPE": { "name": "grpSLOPE", @@ -69195,8 +69903,8 @@ }, "grpnet": { "name": "grpnet", - "version": "0.4", - "sha256": "1ka9i7fg9y87rabjdnggclb1f395m1pbmhwics2wayd9q3m5a6mk", + "version": "0.5", + "sha256": "131g08gwvsiaxlsz7ihrhd6n33rjjczh72fh9wfa2ibc247g48w5", "depends": [] }, "grpreg": { @@ -69209,7 +69917,7 @@ "name": "grpsel", "version": "1.3.1", "sha256": "0b901si4xm6306mzfk3nmwg2h8pk9rhvv2m08v3qnbnxaw06my2h", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2"] }, "grpseq": { "name": "grpseq", @@ -69233,25 +69941,25 @@ "name": "grwat", "version": "0.0.4", "sha256": "10sv1kzf9z1c27d99rvxvx1gmhga6rj1mcyfkvyg93gd8i1jwxg9", - "depends": ["cli", "dplyr", "ggplot2", "lubridate", "magrittr", "mblm", "R_utils", "Rcpp", "rlang", "stringr", "tidyr", "trend", "zoo"] + "depends": ["R_utils", "Rcpp", "cli", "dplyr", "ggplot2", "lubridate", "magrittr", "mblm", "rlang", "stringr", "tidyr", "trend", "zoo"] }, "gsDesign": { "name": "gsDesign", - "version": "3.6.2", - "sha256": "171xbfyrnrsncg4znd8m0r1r9kxrdcxrs03ncmchq1qifq5nc4al", + "version": "3.6.4", + "sha256": "1lknw7n2zd9mfr13lyn9ny3d0lgla56hkdvqmgmvkjsv19jpaq5r", "depends": ["dplyr", "ggplot2", "gt", "magrittr", "r2rtf", "rlang", "tibble", "tidyr", "xtable"] }, "gsDesign2": { "name": "gsDesign2", "version": "1.1.2", "sha256": "0kyj5pv5cr8ljbhzsly70115czhgx5wrpcgpd0jvv2djjf21klh2", - "depends": ["corpcor", "data_table", "dplyr", "gsDesign", "gt", "mvtnorm", "npsurvSS", "r2rtf", "Rcpp", "survival", "tibble", "tidyr"] + "depends": ["Rcpp", "corpcor", "data_table", "dplyr", "gsDesign", "gt", "mvtnorm", "npsurvSS", "r2rtf", "survival", "tibble", "tidyr"] }, "gsEasy": { "name": "gsEasy", "version": "1.5", "sha256": "1mvqnyjzi5ik5bqisxpf6a592n9rnkv915kwnis238akwvkspspa", - "depends": ["ontologyIndex", "Rcpp"] + "depends": ["Rcpp", "ontologyIndex"] }, "gsMAMS": { "name": "gsMAMS", @@ -69281,13 +69989,13 @@ "name": "gsbm", "version": "0.2.2", "sha256": "0pvlb2vainsazcyh1713m11q387ykqkj11k8sg0s96ldnzv751lg", - "depends": ["doParallel", "foreach", "Matrix", "RSpectra", "softImpute"] + "depends": ["Matrix", "RSpectra", "doParallel", "foreach", "softImpute"] }, "gscaLCA": { "name": "gscaLCA", "version": "0.0.5", "sha256": "12zksjp0wh95qg7vxh22z652hk35r9sp0qxrms4y1laixa8vr71x", - "depends": ["devtools", "doSNOW", "fastDummies", "fclust", "foreach", "ggplot2", "gridExtra", "MASS", "nnet", "progress", "psych", "stringr"] + "depends": ["MASS", "devtools", "doSNOW", "fastDummies", "fclust", "foreach", "ggplot2", "gridExtra", "nnet", "progress", "psych", "stringr"] }, "gscounts": { "name": "gscounts", @@ -69311,7 +70019,7 @@ "name": "gsignal", "version": "0.3-5", "sha256": "0qyb8p8vg7sfx6kgib03lwidxh9my669asbjwvbpwzxd4sb51gsf", - "depends": ["pracma", "Rcpp"] + "depends": ["Rcpp", "pracma"] }, "gsisdecoder": { "name": "gsisdecoder", @@ -69353,13 +70061,13 @@ "name": "gspcr", "version": "0.9.5", "sha256": "19k07yg3z2p63dgq8hyyqpnq2r23rwbh1wqwna4d4w1bif9vgq8b", - "depends": ["dplyr", "FactoMineR", "ggplot2", "MASS", "MLmetrics", "nnet", "PCAmixdata", "reshape2", "rlang"] + "depends": ["FactoMineR", "MASS", "MLmetrics", "PCAmixdata", "dplyr", "ggplot2", "nnet", "reshape2", "rlang"] }, "gsrs": { "name": "gsrs", "version": "0.1.1", "sha256": "0x5fll59l000dqszy0gmhsfqgpaljc57j1grqg5c7y1p3vji38in", - "depends": ["doParallel", "foreach", "MASS"] + "depends": ["MASS", "doParallel", "foreach"] }, "gsrsb": { "name": "gsrsb", @@ -69407,12 +70115,12 @@ "name": "gsynth", "version": "1.2.1", "sha256": "1a4s8ghxc5zw295ys8hp22nx93gc1vyakn7r1dcq3ghikh02nzaa", - "depends": ["abind", "doParallel", "doRNG", "foreach", "future", "GGally", "ggplot2", "lfe", "MASS", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["GGally", "MASS", "Rcpp", "RcppArmadillo", "abind", "doParallel", "doRNG", "foreach", "future", "ggplot2", "lfe", "mvtnorm"] }, "gt": { "name": "gt", - "version": "0.10.1", - "sha256": "11rkrkj9ic8wl0jbzigyrsb31crqbz1gpmb9qmavg424vpi60ry5", + "version": "0.11.0", + "sha256": "1jg9kg2b1qig1awfgnb5fi54qjmvl2qw1ny0l4vsqh87c2f3yij3", "depends": ["base64enc", "bigD", "bitops", "cli", "commonmark", "dplyr", "fs", "glue", "htmltools", "htmlwidgets", "juicyjuice", "magrittr", "markdown", "reactable", "rlang", "sass", "scales", "tidyselect", "vctrs", "xml2"] }, "gt4ireval": { @@ -69461,7 +70169,7 @@ "name": "gtfs2gps", "version": "2.1-1", "sha256": "0k65iy7armdn13bs31wr6gq7hdxpz5nqqzpdxpm5g1mkxwc9fi1g", - "depends": ["checkmate", "data_table", "furrr", "future", "gtfstools", "lwgeom", "progressr", "Rcpp", "sf", "sfheaders", "terra", "units"] + "depends": ["Rcpp", "checkmate", "data_table", "furrr", "future", "gtfstools", "lwgeom", "progressr", "sf", "sfheaders", "terra", "units"] }, "gtfsio": { "name": "gtfsio", @@ -69473,7 +70181,7 @@ "name": "gtfsrouter", "version": "0.1.2", "sha256": "1v8b3yr7c7yaavy3ivj7ik2hmbdyjasmkxkbrs3f943m9fbkngwi", - "depends": ["cli", "data_table", "geodist", "Rcpp"] + "depends": ["Rcpp", "cli", "data_table", "geodist"] }, "gtfstools": { "name": "gtfstools", @@ -69507,8 +70215,8 @@ }, "gtreg": { "name": "gtreg", - "version": "0.3.0", - "sha256": "1kvzi16ziy37zyal2ibgfpzbr5qf26z94v1381qsqhiwn382xng9", + "version": "0.4.0", + "sha256": "1ldlv43hgxb6dzs4d2ha1rd5qyyia5pyih2v7rfhmjdnz9qdwl6d", "depends": ["broom_helpers", "cli", "dplyr", "forcats", "glue", "gtsummary", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "gtrendsR": { @@ -69519,9 +70227,9 @@ }, "gtsummary": { "name": "gtsummary", - "version": "1.7.2", - "sha256": "02jbsdv8wwncnrmqmf12pz3ld759s8ll5dl5rrxv8ad6qgqjbhnx", - "depends": ["broom", "broom_helpers", "cli", "dplyr", "forcats", "glue", "gt", "knitr", "lifecycle", "purrr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] + "version": "2.0.1", + "sha256": "13p3ii63whd0vgx5lnvdaqhmi6if492r9x2v769vnck2dzpsrjbp", + "depends": ["cards", "cli", "dplyr", "glue", "gt", "lifecycle", "rlang", "tidyr", "vctrs"] }, "guaguas": { "name": "guaguas", @@ -69563,7 +70271,7 @@ "name": "guiplot", "version": "0.5.0", "sha256": "0w0airy3z9hskpsqsk136ipmj8wn9v9j5n6sicybwm0qvj83fzhj", - "depends": ["DT", "excelR", "ggplot2", "jsonlite", "magrittr", "R6", "rlang", "shiny", "svglite"] + "depends": ["DT", "R6", "excelR", "ggplot2", "jsonlite", "magrittr", "rlang", "shiny", "svglite"] }, "guix_install": { "name": "guix.install", @@ -69629,7 +70337,7 @@ "name": "gwaRs", "version": "0.3.0", "sha256": "1mjwsf1sbrd88psiz6f74zddv1wvhpxk5nxbfjpdrxs74rkc36fs", - "depends": ["data_table", "dplyr", "ggplot2", "ggrepel", "RColorBrewer", "scales", "tidyr"] + "depends": ["RColorBrewer", "data_table", "dplyr", "ggplot2", "ggrepel", "scales", "tidyr"] }, "gwasforest": { "name": "gwasforest", @@ -69659,13 +70367,13 @@ "name": "gwid", "version": "0.2.0", "sha256": "1qkj6773ywm3mxry9d9yzf2m52dcmjg5h5031h48x6gpg4qjf1k2", - "depends": ["data_table", "gdsfmt", "ggplot2", "lattice", "Matrix", "piggyback", "plotly", "RcppRoll", "shiny", "SNPRelate"] + "depends": ["Matrix", "RcppRoll", "SNPRelate", "data_table", "gdsfmt", "ggplot2", "lattice", "piggyback", "plotly", "shiny"] }, "gwpcormapper": { "name": "gwpcormapper", "version": "0.1.3", "sha256": "0d8skx6rxas5qvhg7ykhymrzd6dawj45421vr66r4wi4hbdfjbzx", - "depends": ["attempt", "config", "corpcor", "crosstalk", "dplyr", "DT", "geodist", "glue", "golem", "htmltools", "leaflet", "pkgload", "plotly", "processx", "Rcpp", "sf", "shiny", "shinydashboard", "shinyjs", "viridis"] + "depends": ["DT", "Rcpp", "attempt", "config", "corpcor", "crosstalk", "dplyr", "geodist", "glue", "golem", "htmltools", "leaflet", "pkgload", "plotly", "processx", "sf", "shiny", "shinydashboard", "shinyjs", "viridis"] }, "gwrpvr": { "name": "gwrpvr", @@ -69695,7 +70403,7 @@ "name": "gyro", "version": "1.4.0", "sha256": "0zgzqgfd97bxb4crijlc9byak4dl5zrhp6ynch8yda8m3rx1gz92", - "depends": ["clipr", "colorsGen", "cxhull", "Morpho", "plotrix", "Polychrome", "purrr", "RCDT", "Rcpp", "rgl", "rstudioapi", "Rvcg"] + "depends": ["Morpho", "Polychrome", "RCDT", "Rcpp", "Rvcg", "clipr", "colorsGen", "cxhull", "plotrix", "purrr", "rgl", "rstudioapi"] }, "h0": { "name": "h0", @@ -69707,7 +70415,7 @@ "name": "h2o", "version": "3.44.0.3", "sha256": "10hczpb53s9nvnj21fqp0nlvr9pa8lxgv97q75lfks0m5xn5za31", - "depends": ["jsonlite", "RCurl"] + "depends": ["RCurl", "jsonlite"] }, "h2o4gpu": { "name": "h2o4gpu", @@ -69725,7 +70433,7 @@ "name": "h3jsr", "version": "1.3.1", "sha256": "04h905p3xpaswpx728kp7z6bgqlncgzikfv6njvgvzbhmpfn9fs8", - "depends": ["geojsonsf", "sf", "tidyr", "V8"] + "depends": ["V8", "geojsonsf", "sf", "tidyr"] }, "h3lib": { "name": "h3lib", @@ -69743,13 +70451,13 @@ "name": "hBayesDM", "version": "1.2.1", "sha256": "1vy1kaffviidhil39n7k2fr5rjgzkhkaj1r2nhmp908snq8nhf2m", - "depends": ["BH", "data_table", "ggplot2", "loo", "Rcpp", "RcppEigen", "rstan", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "data_table", "ggplot2", "loo", "rstan"] }, "hIRT": { "name": "hIRT", "version": "0.3.0", "sha256": "0s0i6p9iv0yv0l15dnwkpcmc91751jyjs1y1nz671lz6jpb8rz5c", - "depends": ["ltm", "Matrix", "pryr", "rms"] + "depends": ["Matrix", "ltm", "pryr", "rms"] }, "hJAM": { "name": "hJAM", @@ -69785,7 +70493,7 @@ "name": "habCluster", "version": "1.0.5", "sha256": "1cjmhq8krkv4g1vy70kc3j667djzmq38xlqn568f437f6jaglvkp", - "depends": ["igraph", "raster", "Rcpp", "sf", "stars"] + "depends": ["Rcpp", "igraph", "raster", "sf", "stars"] }, "hablar": { "name": "hablar", @@ -69797,7 +70505,7 @@ "name": "habtools", "version": "1.0.5", "sha256": "1y0pjx16272dknmp2lpc69fmj5h4s4hsl2kchlrcwxpdyfyz7yb2", - "depends": ["concaveman", "dplyr", "geometry", "magrittr", "purrr", "raster", "Rvcg", "sp", "terra"] + "depends": ["Rvcg", "concaveman", "dplyr", "geometry", "magrittr", "purrr", "raster", "sp", "terra"] }, "hackeRnews": { "name": "hackeRnews", @@ -69827,25 +70535,25 @@ "name": "hahmmr", "version": "1.0.0", "sha256": "19bds84pkimr71dy1365b71k7ihn7x86yalgcmagvkxgygpg3409", - "depends": ["data_table", "dplyr", "GenomicRanges", "ggplot2", "glue", "IRanges", "patchwork", "Rcpp", "RcppArmadillo", "roptim", "stringr", "tibble", "zoo"] + "depends": ["GenomicRanges", "IRanges", "Rcpp", "RcppArmadillo", "data_table", "dplyr", "ggplot2", "glue", "patchwork", "roptim", "stringr", "tibble", "zoo"] }, "hakaiApi": { "name": "hakaiApi", "version": "1.0.2", "sha256": "0lxqk4cp1s1sm3nbsp74q1bpklmph620c2f1kii97h6yimnq9bi0", - "depends": ["dplyr", "httr", "R6", "readr", "tibble"] + "depends": ["R6", "dplyr", "httr", "readr", "tibble"] }, "hal9001": { "name": "hal9001", "version": "0.4.6", "sha256": "1p88rpm4alkr56w4cjl8sxj6ylq991dsny11njcdx5rzc25jh8qi", - "depends": ["assertthat", "data_table", "glmnet", "Matrix", "origami", "Rcpp", "RcppEigen", "stringr"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "assertthat", "data_table", "glmnet", "origami", "stringr"] }, "haldensify": { "name": "haldensify", "version": "0.2.3", "sha256": "071lgx6j92n40bjlrp3khmnavvkla371rkm1ssx20ig5pkay23pw", - "depends": ["assertthat", "data_table", "dplyr", "future_apply", "ggplot2", "hal9001", "matrixStats", "origami", "Rdpack", "rlang", "rsample", "scales", "tibble"] + "depends": ["Rdpack", "assertthat", "data_table", "dplyr", "future_apply", "ggplot2", "hal9001", "matrixStats", "origami", "rlang", "rsample", "scales", "tibble"] }, "halfcircle": { "name": "halfcircle", @@ -69887,7 +70595,7 @@ "name": "handwriter", "version": "3.1.1", "sha256": "1gwxp5nsw38f368z586hixk4i7b87vg0fcmxxdl2zldawv1sx0v9", - "depends": ["doParallel", "dplyr", "foreach", "ggplot2", "igraph", "lpSolve", "magick", "mc2d", "png", "purrr", "Rcpp", "RcppArmadillo", "reshape2", "Rfast", "rjags", "stringr", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "Rfast", "doParallel", "dplyr", "foreach", "ggplot2", "igraph", "lpSolve", "magick", "mc2d", "png", "purrr", "reshape2", "rjags", "stringr", "tidyr"] }, "handyFunctions": { "name": "handyFunctions", @@ -69935,7 +70643,7 @@ "name": "haploR", "version": "4.0.7", "sha256": "1s8f556d9x5h76gyl4wggcx01f4qrx0fp5mz46yk2x9qmwiir89v", - "depends": ["DT", "httr", "plyr", "RCurl", "RJSONIO", "RUnit", "tibble", "XML"] + "depends": ["DT", "RCurl", "RJSONIO", "RUnit", "XML", "httr", "plyr", "tibble"] }, "haplotyper": { "name": "haplotyper", @@ -69995,7 +70703,7 @@ "name": "harmony", "version": "1.2.0", "sha256": "1df7bb9ba3m0c44fhmh8cs4hlkh4fffjwm8rz7l87lf5pdy7sg56", - "depends": ["cowplot", "dplyr", "ggplot2", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "RhpcBLASctl", "rlang", "tibble"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "RhpcBLASctl", "cowplot", "dplyr", "ggplot2", "rlang", "tibble"] }, "harmonydata": { "name": "harmonydata", @@ -70037,7 +70745,7 @@ "name": "hasseDiagram", "version": "0.2.0", "sha256": "1ni4wzj8g6qmpgz1xj62vawkcpm3jr4jqqr1xaxlh5nzbj9fn57h", - "depends": ["graph", "Rgraphviz"] + "depends": ["Rgraphviz", "graph"] }, "haven": { "name": "haven", @@ -70055,7 +70763,7 @@ "name": "hawkesbow", "version": "1.0.3", "sha256": "1jbwvzw4j8l7ywrbm4bhxvwp1b3j4ahi6fchmmvfjnx0da1d8163", - "depends": ["BH", "nloptr", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "nloptr"] }, "hazer": { "name": "hazer", @@ -70067,13 +70775,13 @@ "name": "hbal", "version": "1.2.12", "sha256": "1r3wlgvjy33cr0vi0lpckim4cybz67lh44fi6d36hms8pirnl4rl", - "depends": ["estimatr", "generics", "ggplot2", "glmnet", "gridExtra", "gtable", "nloptr", "Rcpp", "RcppEigen", "stringr"] + "depends": ["Rcpp", "RcppEigen", "estimatr", "generics", "ggplot2", "glmnet", "gridExtra", "gtable", "nloptr", "stringr"] }, "hbamr": { "name": "hbamr", "version": "2.3.1", "sha256": "1cch2l4dazny7p5hn16v0fp5mir10fy4qa8ibpgx3j2vi8w05c1x", - "depends": ["BH", "colorspace", "dplyr", "future", "future_apply", "ggplot2", "loo", "matrixStats", "plyr", "progressr", "RColorBrewer", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tidyr"] + "depends": ["BH", "RColorBrewer", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "colorspace", "dplyr", "future", "future_apply", "ggplot2", "loo", "matrixStats", "plyr", "progressr", "rlang", "rstan", "rstantools", "tidyr"] }, "hbbr": { "name": "hbbr", @@ -70135,11 +70843,17 @@ "sha256": "1cari4ms1j5x2i5m9yd50j7alf18k7z053yhqbck0hs2mck9jx86", "depends": ["Rcpp"] }, + "hclusteasy": { + "name": "hclusteasy", + "version": "0.1.0", + "sha256": "0c3w2wmk5a85kxkkg782w2ggy43i2ayrrjfwl91bkxba5n2pk3sa", + "depends": ["clusterSim", "factoextra", "readxl"] + }, "hctrial": { "name": "hctrial", "version": "0.1.0", "sha256": "19li8i8hx0r3b63q80cnj6pr72rdbmykxq0kcfbn4azq3sdd046y", - "depends": ["clinfun", "GenBinomApps"] + "depends": ["GenBinomApps", "clinfun"] }, "hdImpute": { "name": "hdImpute", @@ -70163,7 +70877,7 @@ "name": "hdbinseg", "version": "1.0.2", "sha256": "0q5lfczymrd4ln04lbdysncx6ylcsgrk69mhvm7jjk7pybrpm9wq", - "depends": ["doParallel", "foreach", "iterators", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "iterators"] }, "hdbm": { "name": "hdbm", @@ -70175,13 +70889,13 @@ "name": "hdbma", "version": "1.0", "sha256": "0dj9hh6x5096znl7naga0qrx2fwr4crgjk7fyk5vxn6v1gl3llrh", - "depends": ["gplots", "lattice", "MASS", "R2jags", "survival"] + "depends": ["MASS", "R2jags", "gplots", "lattice", "survival"] }, "hdcate": { "name": "hdcate", "version": "0.1.0", "sha256": "1jv6y38lzvm75s44n1pjvkkf5xcvrvclil318gvx54b16hvgggcg", - "depends": ["caret", "hdm", "KernSmooth", "locpol", "R6"] + "depends": ["KernSmooth", "R6", "caret", "hdm", "locpol"] }, "hdcuremodels": { "name": "hdcuremodels", @@ -70203,21 +70917,21 @@ }, "hdf5r": { "name": "hdf5r", - "version": "1.3.10", - "sha256": "0khj94z6ls6dnc6fpxwf1w93mk6f3z2p39mbihf0lz52jc36wjcj", - "depends": ["bit64", "R6"] + "version": "1.3.11", + "sha256": "1i58andd3k7ghmlv9f2frfa823p6lhdcwghyrszgmb3jpikxd5cp", + "depends": ["R6", "bit64"] }, "hdf5r_Extra": { "name": "hdf5r.Extra", "version": "0.0.6", "sha256": "0k8rvwxr30pbx0svikfar40465ff2daipsf91yp2px7hrgb4y129", - "depends": ["checkmate", "dplyr", "easy_utils", "hdf5r", "Matrix", "MatrixExtra", "rlang"] + "depends": ["Matrix", "MatrixExtra", "checkmate", "dplyr", "easy_utils", "hdf5r", "rlang"] }, "hdflex": { "name": "hdflex", "version": "0.2.1", "sha256": "1f02gkgry8zilrk3sl4dl2jkbnvqn9700lv8k5zlh4cangq5jp9n", - "depends": ["checkmate", "dplyr", "Rcpp", "RcppArmadillo", "roll", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "checkmate", "dplyr", "roll", "stringr"] }, "hdfqlr": { "name": "hdfqlr", @@ -70229,7 +70943,7 @@ "name": "hdi", "version": "0.1-9", "sha256": "0k35zqz58lcx5p7ijhks4j7kqp553zggvrx4lh6k4s85lp601x22", - "depends": ["glmnet", "linprog", "MASS", "scalreg"] + "depends": ["MASS", "glmnet", "linprog", "scalreg"] }, "hdiVAR": { "name": "hdiVAR", @@ -70241,19 +70955,19 @@ "name": "hdm", "version": "0.3.2", "sha256": "0spy2a23b6hxw6dm6zjqya066ar0224b64lckh6hrapha8kv4m1k", - "depends": ["checkmate", "Formula", "ggplot2", "glmnet", "MASS"] + "depends": ["Formula", "MASS", "checkmate", "ggplot2", "glmnet"] }, "hdme": { "name": "hdme", "version": "0.6.0", "sha256": "04s9r29yjirkzki6drcyglh2hd712habzdgpw0fnf3cy9960wv4v", - "depends": ["ggplot2", "glmnet", "Rcpp", "RcppArmadillo", "Rdpack", "Rglpk", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "Rglpk", "ggplot2", "glmnet", "rlang"] }, "hdmed": { "name": "hdmed", "version": "1.0.1", "sha256": "1vmyf9w5dwl8ayxsk7ykd13hl41j4a435771rkgmkmnm5fbcqaai", - "depends": ["bama", "foreach", "freebird", "gcdnet", "genlasso", "hdi", "iterators", "MASS", "mediation", "ncvreg"] + "depends": ["MASS", "bama", "foreach", "freebird", "gcdnet", "genlasso", "hdi", "iterators", "mediation", "ncvreg"] }, "hdnom": { "name": "hdnom", @@ -70265,7 +70979,7 @@ "name": "hdpGLM", "version": "1.0.3", "sha256": "1hh0d0dmnqxzsfar86bd0cqjj5jljyhw073zi59bmjyg4m0rjyyn", - "depends": ["coda", "data_table", "dplyr", "formula_tools", "ggjoy", "ggplot2", "ggpubr", "ggridges", "Hmisc", "isotone", "LaplacesDemon", "magrittr", "MASS", "MCMCpack", "mvtnorm", "png", "purrr", "questionr", "Rcpp", "RcppArmadillo", "rprojroot", "stringr", "tibble", "tidyr", "tidyverse"] + "depends": ["Hmisc", "LaplacesDemon", "MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "coda", "data_table", "dplyr", "formula_tools", "ggjoy", "ggplot2", "ggpubr", "ggridges", "isotone", "magrittr", "mvtnorm", "png", "purrr", "questionr", "rprojroot", "stringr", "tibble", "tidyr", "tidyverse"] }, "hdpca": { "name": "hdpca", @@ -70277,7 +70991,7 @@ "name": "hdrcde", "version": "3.4", "sha256": "16qlk44cjvn2s0vzaf915df65ksdx20dbxhy7fpdqins46hccha3", - "depends": ["ash", "ggplot2", "KernSmooth", "ks", "locfit", "RColorBrewer"] + "depends": ["KernSmooth", "RColorBrewer", "ash", "ggplot2", "ks", "locfit"] }, "hds": { "name": "hds", @@ -70317,14 +71031,14 @@ }, "healthyAddress": { "name": "healthyAddress", - "version": "0.4.2", - "sha256": "1fbqka0gg7l11n6czb2z2480r7v5ispn54a17xjad547ndy12n5v", + "version": "0.4.3", + "sha256": "0rj2cd34dw17bdw3m6dkgyaji72f3sapf9jnvlr8sima6nfiacqd", "depends": ["data_table", "fastmatch", "fst", "hutils", "hutilscpp", "magrittr", "qs"] }, "healthyR": { "name": "healthyR", - "version": "0.2.1", - "sha256": "0wlw6sd187sw5ar58c4a5yz9fw0bc044cik1xsq54ipp4xprlnxp", + "version": "0.2.2", + "sha256": "1fa2w3w2cfn5ak01kls8yxxzyfvmp2v43q0bfr4ylrimd1fvbhbp", "depends": ["cowplot", "dplyr", "ggplot2", "lubridate", "magrittr", "plotly", "purrr", "rlang", "scales", "sqldf", "stringr", "tibble", "timetk", "writexl"] }, "healthyR_ai": { @@ -70335,8 +71049,8 @@ }, "healthyR_data": { "name": "healthyR.data", - "version": "1.1.0", - "sha256": "025pgadi0rgwz0yvkx3mgf6r66sk2phmsmvgpykwd6jxyfwix2yk", + "version": "1.1.1", + "sha256": "1g8fd2s60i6yhfp6z2g0ib6zz4n2xvwswbzacbffbvakf21djwvc", "depends": ["dplyr", "httr2", "janitor", "rlang", "stringr", "tidyr"] }, "healthyR_ts": { @@ -70349,7 +71063,7 @@ "name": "healthyverse", "version": "1.0.4", "sha256": "1h3d8wq6if1nkqc1d3n6y0g7i7xsvx9ci09z3jvhqx62f464ybgm", - "depends": ["cli", "crayon", "dplyr", "healthyR", "healthyR_ai", "healthyR_data", "healthyR_ts", "magrittr", "purrr", "rlang", "rstudioapi", "tibble", "tidyAML", "TidyDensity"] + "depends": ["TidyDensity", "cli", "crayon", "dplyr", "healthyR", "healthyR_ai", "healthyR_data", "healthyR_ts", "magrittr", "purrr", "rlang", "rstudioapi", "tibble", "tidyAML"] }, "heapsofpapers": { "name": "heapsofpapers", @@ -70385,18 +71099,18 @@ "name": "heatmaply", "version": "1.5.0", "sha256": "1crdm7avxv3zx59byz2fqbcw95728crwf9cckjb9gal1065xv95c", - "depends": ["assertthat", "colorspace", "dendextend", "egg", "ggplot2", "htmlwidgets", "magrittr", "plotly", "RColorBrewer", "reshape2", "scales", "seriation", "viridis", "webshot"] + "depends": ["RColorBrewer", "assertthat", "colorspace", "dendextend", "egg", "ggplot2", "htmlwidgets", "magrittr", "plotly", "reshape2", "scales", "seriation", "viridis", "webshot"] }, "heatwaveR": { "name": "heatwaveR", "version": "0.4.6", "sha256": "172qg8dgyn5lbwmyq8dxdccxr4aqaq6iixn5dqb4fy99ahgdbhyv", - "depends": ["data_table", "dplyr", "ggplot2", "lubridate", "plyr", "Rcpp", "RcppArmadillo", "RcppRoll", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "RcppRoll", "data_table", "dplyr", "ggplot2", "lubridate", "plyr", "tibble"] }, "heck": { "name": "heck", - "version": "0.1.0", - "sha256": "0mpfxkzk171qql9jx8byaiyinyb1ibla11jzljlw9pkdf4gs6m4b", + "version": "0.1.1", + "sha256": "0s4j0cyac3lqk4jjlbwamdk3nkdicq0nxaa579j9k63azcdz49rs", "depends": [] }, "heddlr": { @@ -70405,6 +71119,12 @@ "sha256": "0ixmcgvfbq4hi3wv1fyzpwacmxmixsw5yq6mq5xygk6ji03m1v23", "depends": ["rlang", "utf8", "yaml"] }, + "hedgedrf": { + "name": "hedgedrf", + "version": "0.0.1", + "sha256": "1ka2pp1df00j63g15arcnndzribgkkaimvhxgiia9g409pmyizpc", + "depends": ["CVXR", "ranger"] + }, "hedgehog": { "name": "hedgehog", "version": "0.1", @@ -70419,9 +71139,9 @@ }, "heimdall": { "name": "heimdall", - "version": "1.0.3", - "sha256": "02lpyiphzyirmi6fl0l4k3vm5b3gvw1f8ha5mmsrkcnnvixakb2y", - "depends": ["caret", "daltoolbox", "ggplot2"] + "version": "1.0.717", + "sha256": "0qqr084h30p7aiv7cfz7g39qgswz4d249s90cck6xhbc8la9jbc3", + "depends": ["caret", "daltoolbox", "ggplot2", "reticulate"] }, "heims": { "name": "heims", @@ -70431,9 +71151,9 @@ }, "heiscore": { "name": "heiscore", - "version": "0.0.1", - "sha256": "0bj1li0m4mpd04f4zqh1dj4v593cv5nvv17n2yasjbqrymi15mr5", - "depends": ["dplyr", "fmsb", "ggplot2", "ggpubr", "magrittr", "RColorBrewer", "rlang", "shiny", "shinythemes", "stringr", "tibble", "tidyr"] + "version": "0.1.3", + "sha256": "1yh4khm83aw56f8xkjan0a3v0xcc7idg6agpp2mk39dwzaqmxbk0", + "depends": ["dplyr", "fmsb", "ggplot2", "ggpubr", "magrittr", "rlang", "shiny", "shinyWidgets", "shinythemes", "stringr", "tibble", "tidyr", "viridis"] }, "helixvis": { "name": "helixvis", @@ -70481,7 +71201,7 @@ "name": "heplots", "version": "1.7.0", "sha256": "0hkwfg2xfsmvxnzr2jdfxn93ny325rkhc2cakr4hvddvg65dckfx", - "depends": ["broom", "car", "magrittr", "MASS", "purrr", "rgl", "tibble"] + "depends": ["MASS", "broom", "car", "magrittr", "purrr", "rgl", "tibble"] }, "here": { "name": "here", @@ -70517,13 +71237,13 @@ "name": "hero", "version": "0.6", "sha256": "0az2gva4rdbgsfd31512h8a23bvvbx812ws05rg2qs6r5qhwbj8r", - "depends": ["fields", "Matrix", "optimx", "pbapply", "sf", "sp"] + "depends": ["Matrix", "fields", "optimx", "pbapply", "sf", "sp"] }, "hesim": { "name": "hesim", "version": "0.5.4", "sha256": "1fx55wwzk2w3zxnk96821bxrsklln7r6px19m7iv0f376iaamiq7", - "depends": ["data_table", "flexsurv", "ggplot2", "MASS", "msm", "R6", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["MASS", "R6", "Rcpp", "RcppArmadillo", "data_table", "flexsurv", "ggplot2", "msm", "survival"] }, "hetGP": { "name": "hetGP", @@ -70535,19 +71255,19 @@ "name": "heterogen", "version": "1.2.33", "sha256": "17287n38km02ldwddldw9zh8f8w18f9vi7dcg52a17r9r7v0mshv", - "depends": ["future", "Rcpp", "RcppArmadillo", "RcppEigen", "rio", "scales", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "future", "rio", "scales", "terra"] }, "heterometa": { "name": "heterometa", - "version": "0.2", - "sha256": "01sahscx2lx9z7l0fpxqbrq34c6zkyyclwdcam27vcwj8189w2n1", - "depends": ["mathjaxr", "Rdpack"] + "version": "0.3", + "sha256": "1z295l3kzz0c3q6qx5qhf0nr73db13vjvn1lnis05509mga9i28w", + "depends": ["Rdpack", "mathjaxr"] }, "heteromixgm": { "name": "heteromixgm", - "version": "1.0.0", - "sha256": "0jhvjalpx7licjjvj8ld4als1jkm22mkbxmz893h91qzacznx8zk", - "depends": ["BDgraph", "glasso", "igraph", "MASS", "Matrix", "tmvtnorm"] + "version": "2.0.1", + "sha256": "111qhf88bjkpraaqabyq8m40yk99jkmd2b6m7d7502gac3a0bf6z", + "depends": ["BDgraph", "MASS", "Matrix", "glasso", "igraph", "tmvtnorm"] }, "hetsurr": { "name": "hetsurr", @@ -70559,7 +71279,7 @@ "name": "hett", "version": "0.3-3", "sha256": "0i7q28nc67m62vi1ipfg035yqjh691fb1mp33dp1b68g5wjysphh", - "depends": ["lattice", "MASS"] + "depends": ["MASS", "lattice"] }, "hettest": { "name": "hettest", @@ -70577,7 +71297,7 @@ "name": "hettx", "version": "0.1.3", "sha256": "15i9n2fcfbkv11qlgh4gsjvfnzzziwbcn8izzxw2d0kbdhhk7h8c", - "depends": ["doParallel", "dplyr", "foreach", "formula_tools", "ggplot2", "MASS", "moments", "mvtnorm", "plyr", "purrr", "quantreg", "tidyr"] + "depends": ["MASS", "doParallel", "dplyr", "foreach", "formula_tools", "ggplot2", "moments", "mvtnorm", "plyr", "purrr", "quantreg", "tidyr"] }, "hetu": { "name": "hetu", @@ -70601,7 +71321,7 @@ "name": "heuristicsmineR", "version": "0.3.0", "sha256": "0w4f7xpz2342k38b5a7fs6fq50045hh2836390zg36nqdapg8vlv", - "depends": ["BH", "bupaR", "data_table", "DiagrammeR", "dplyr", "ggplot2", "ggthemes", "magrittr", "petrinetR", "processmapR", "purrr", "Rcpp", "rlang", "scales", "stringr", "tidyr"] + "depends": ["BH", "DiagrammeR", "Rcpp", "bupaR", "data_table", "dplyr", "ggplot2", "ggthemes", "magrittr", "petrinetR", "processmapR", "purrr", "rlang", "scales", "stringr", "tidyr"] }, "hexSticker": { "name": "hexSticker", @@ -70649,7 +71369,7 @@ "name": "hfr", "version": "0.7.1", "sha256": "0xcmin49sbkl3c9xrvq7spp5qnfdf7v6fscv3a85dhd5b5adhpm7", - "depends": ["corpcor", "dendextend", "quadprog", "RColorBrewer"] + "depends": ["RColorBrewer", "corpcor", "dendextend", "quadprog"] }, "hglasso": { "name": "hglasso", @@ -70661,7 +71381,7 @@ "name": "hglm", "version": "2.2-1", "sha256": "1lyxkvqzfll1qrz5c2km9ikhq0dm63x39by4vc1nmkd24yza93nc", - "depends": ["hglm_data", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "hglm_data"] }, "hglm_data": { "name": "hglm.data", @@ -70689,9 +71409,9 @@ }, "hgwrr": { "name": "hgwrr", - "version": "0.3-0", - "sha256": "0m3h5zwdnj4l7i6nh0mrjj4wprajgazninzffxpy14g7fy907ifn", - "depends": ["Rcpp", "RcppArmadillo"] + "version": "0.5-0", + "sha256": "03ma8g0qz6hpp2m1ys3c6mnkbpjbmpf60pxl0cggaj5d9aymjs1c", + "depends": ["Rcpp", "RcppArmadillo", "sf"] }, "hhh4contacts": { "name": "hhh4contacts", @@ -70709,7 +71429,7 @@ "name": "hhsmm", "version": "0.4.0", "sha256": "15lqb4k8q0c9w2fi03ndrzs5vdnh7r5wa4ifpzqvggw5vrnfmfy8", - "depends": ["CMAPSS", "magic", "MASS", "mice", "mvtnorm", "progress", "Rcpp", "Rdpack", "splines2"] + "depends": ["CMAPSS", "MASS", "Rcpp", "Rdpack", "magic", "mice", "mvtnorm", "progress", "splines2"] }, "hht": { "name": "hht", @@ -70721,12 +71441,12 @@ "name": "hibayes", "version": "3.0.3", "sha256": "04vkvqha82cpmjflxir83208d9mxwip7wlbc3zd12apvrg2c91x6", - "depends": ["BH", "bigmemory", "CMplot", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "stringr"] + "depends": ["BH", "CMplot", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "bigmemory", "stringr"] }, "hicp": { "name": "hicp", - "version": "0.5.1", - "sha256": "1xzjlwbmibzs362k6c9y346scqvx3lf6n3pnq6bhbklwfw8jd3hz", + "version": "0.6.1", + "sha256": "1zb18sn2az5gval4az4n9g9jipmikd08jj7vpmlqmzdsascp75wg", "depends": ["data_table", "restatapi"] }, "hiddenf": { @@ -70741,6 +71461,12 @@ "sha256": "08yhjgmcmrnrm6rm0vlzvizadvywcs1p6mchw1synxvclfaxyi28", "depends": ["dplyr", "ggnewscale", "ggplot2", "ggrepel", "purrr", "shiny", "tibble", "tidyr", "viridis", "vroom"] }, + "hidradenitis": { + "name": "hidradenitis", + "version": "1.0.0", + "sha256": "0dzdllmsj98yl178fg25vny0vaxhra88zd6ifzv06fcjma53svrj", + "depends": ["checkmate"] + }, "hierBipartite": { "name": "hierBipartite", "version": "0.0.2", @@ -70757,13 +71483,13 @@ "name": "hierSDR", "version": "0.1", "sha256": "164l7gw5bkg09mfs0rnqwfsbgr4mppc0skbmqk2d98mcvvmmcwd7", - "depends": ["lbfgs", "locfit", "MASS", "Matrix", "numDeriv", "optimx"] + "depends": ["MASS", "Matrix", "lbfgs", "locfit", "numDeriv", "optimx"] }, "hierarchicalSets": { "name": "hierarchicalSets", "version": "1.0.4", "sha256": "0i0dl2r1gc8ckk2hb498km9bgsqbj7fp8gpp8778rba001nvgwx7", - "depends": ["ggdendro", "ggplot2", "gtable", "MASS", "Matrix", "patchwork", "RColorBrewer", "Rcpp", "scales", "viridis"] + "depends": ["MASS", "Matrix", "RColorBrewer", "Rcpp", "ggdendro", "ggplot2", "gtable", "patchwork", "scales", "viridis"] }, "hierfstat": { "name": "hierfstat", @@ -70781,13 +71507,13 @@ "name": "highMLR", "version": "0.1.1", "sha256": "0jkv6blkzdnn263wxy7p0hspgf5fchl5fbmzpqb5lfvl2f3pi3j9", - "depends": ["coxme", "dplyr", "gtools", "missForest", "mlr3", "mlr3learners", "R6", "survival", "tibble"] + "depends": ["R6", "coxme", "dplyr", "gtools", "missForest", "mlr3", "mlr3learners", "survival", "tibble"] }, "highOrderPortfolios": { "name": "highOrderPortfolios", "version": "0.1.1", "sha256": "0qjmxiv5dcpgyl5c9vbbizwwg4lpppc9z09rf4c4lf0dfrcj4c5i", - "depends": ["ECOSolveR", "fitHeavyTail", "lpSolveAPI", "nloptr", "PerformanceAnalytics", "quadprog"] + "depends": ["ECOSolveR", "PerformanceAnalytics", "fitHeavyTail", "lpSolveAPI", "nloptr", "quadprog"] }, "highTtest": { "name": "highTtest", @@ -70805,7 +71531,7 @@ "name": "highfrequency", "version": "1.0.1", "sha256": "0jxkmgd3sfipz1z37w9flwy8i94q6vxwlxyaflfbprwlskmlnakd", - "depends": ["data_table", "numDeriv", "quantmod", "Rcpp", "RcppArmadillo", "RcppRoll", "robustbase", "Rsolnp", "sandwich", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "RcppRoll", "Rsolnp", "data_table", "numDeriv", "quantmod", "robustbase", "sandwich", "xts", "zoo"] }, "highlight": { "name": "highlight", @@ -70825,6 +71551,12 @@ "sha256": "1ksgqx2ryg5lfka93yns5cphnf4xc4v55ncmpisydjbcpzd2105c", "depends": ["cli", "glue", "htmltools", "htmlwidgets", "rlang"] }, + "highlightr": { + "name": "highlightr", + "version": "1.0.0", + "sha256": "14as9gqikswfpwzvq0v9s03r6rwzdsa0k9wad6f6zs416a65v1i4", + "depends": ["dplyr", "fuzzyjoin", "ggplot2", "magrittr", "purrr", "quanteda", "quanteda_textstats", "stringr", "tibble", "tidyr", "tm"] + }, "highmean": { "name": "highmean", "version": "3.0", @@ -70841,13 +71573,13 @@ "name": "highriskzone", "version": "1.4.9", "sha256": "0sg3a99pb2559chalxh66zv9mvwbgfx64vp1209vbhbx3sya48r2", - "depends": ["deldir", "fields", "ks", "maps", "Matrix", "mvtnorm", "polyclip", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random", "splancs"] + "depends": ["Matrix", "deldir", "fields", "ks", "maps", "mvtnorm", "polyclip", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random", "splancs"] }, "highs": { "name": "highs", "version": "0.1-10", "sha256": "1vjmzbfydlm434fa1mkwwfcdhmn6sq4ppib26nxfa9zakr7h7q2c", - "depends": ["checkmate", "Rcpp"] + "depends": ["Rcpp", "checkmate"] }, "hightR": { "name": "hightR", @@ -70859,7 +71591,7 @@ "name": "higlasso", "version": "0.9.0", "sha256": "09d500jsxlrv658i90xnb2wj1ad89v1iwb6y7vascyvg3cff104h", - "depends": ["gcdnet", "gglasso", "purrr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "gcdnet", "gglasso", "purrr"] }, "higrad": { "name": "higrad", @@ -70877,7 +71609,7 @@ "name": "hilbertSimilarity", "version": "0.4.3", "sha256": "1251df3q7c7c69f8q9y9bxj210bk2dh80c8ca4s58isf0hr2x7zp", - "depends": ["entropy", "Rcpp"] + "depends": ["Rcpp", "entropy"] }, "hildareadR": { "name": "hildareadR", @@ -70889,13 +71621,13 @@ "name": "hillR", "version": "0.5.2", "sha256": "0gc4yirbn2bp38sjdgin7167yvm0kd6nk4yaj66jp0b5qbpc85gc", - "depends": ["ade4", "ape", "FD", "geiger", "plyr", "tibble"] + "depends": ["FD", "ade4", "ape", "geiger", "plyr", "tibble"] }, "hilldiv": { "name": "hilldiv", "version": "1.5.1", "sha256": "1jp4xvrpqd575y2x0i73s0bq708bzi6gdhqgz85bia6d5kf05lq9", - "depends": ["ape", "data_table", "FSA", "geiger", "ggplot2", "ggpubr", "qgraph", "RColorBrewer", "scales", "vegan"] + "depends": ["FSA", "RColorBrewer", "ape", "data_table", "geiger", "ggplot2", "ggpubr", "qgraph", "scales", "vegan"] }, "hillshader": { "name": "hillshader", @@ -70949,7 +71681,7 @@ "name": "hisse", "version": "2.1.11", "sha256": "1mal9x2x882lq3cf74yjrdan3i69x2kq309b154n6lm4gbpk95vw", - "depends": ["ape", "corHMM", "data_table", "deSolve", "diversitree", "geiger", "GenSA", "igraph", "nloptr", "paleotree", "phangorn", "phytools", "plotrix", "subplex", "TreeSim"] + "depends": ["GenSA", "TreeSim", "ape", "corHMM", "data_table", "deSolve", "diversitree", "geiger", "igraph", "nloptr", "paleotree", "phangorn", "phytools", "plotrix", "subplex"] }, "histmdl": { "name": "histmdl", @@ -70967,13 +71699,13 @@ "name": "historicalborrow", "version": "1.0.4", "sha256": "0g7fs6qn957s3zw4ibbqszn2zpncpf6m41r68dw8g6x942mr0fhv", - "depends": ["dplyr", "ggplot2", "Matrix", "posterior", "rjags", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Matrix", "dplyr", "ggplot2", "posterior", "rjags", "rlang", "tibble", "tidyr", "tidyselect"] }, "historicalborrowlong": { "name": "historicalborrowlong", "version": "0.0.8", "sha256": "05kk4m80xvmlra9dlkcq2ww5llyg9r8bqhh8p7i8kzma6c31w4qa", - "depends": ["BH", "clustermq", "dplyr", "ggplot2", "MASS", "Matrix", "posterior", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr", "tidyselect", "trialr", "withr", "zoo"] + "depends": ["BH", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "clustermq", "dplyr", "ggplot2", "posterior", "rlang", "rstan", "rstantools", "tibble", "tidyr", "tidyselect", "trialr", "withr", "zoo"] }, "historydata": { "name": "historydata", @@ -71003,7 +71735,7 @@ "name": "hive", "version": "0.2-2", "sha256": "0ihghpfsk73lndrfrk5907kdsih9s0a7xq23zcyfaa05nk98510n", - "depends": ["rJava", "XML"] + "depends": ["XML", "rJava"] }, "hkdatasets": { "name": "hkdatasets", @@ -71033,19 +71765,19 @@ "name": "hlt", "version": "1.3.1", "sha256": "0wzxymjb70lcgk1hj6ky6ypk9i6s0a5rm7yqlpbs1fddl6mkcln9", - "depends": ["doParallel", "foreach", "ggplot2", "Rcpp", "RcppDist", "RcppProgress", "tidyr", "truncnorm"] + "depends": ["Rcpp", "RcppDist", "RcppProgress", "doParallel", "foreach", "ggplot2", "tidyr", "truncnorm"] }, "hmcdm": { "name": "hmcdm", "version": "2.1.1", "sha256": "0w3ldx8bwcqbc0mv1f8yiby08w4s37jc7gp3p53pmldqk65s7qfb", - "depends": ["bayesplot", "progress", "Rcpp", "RcppArmadillo", "rstantools"] + "depends": ["Rcpp", "RcppArmadillo", "bayesplot", "progress", "rstantools"] }, "hmclearn": { "name": "hmclearn", "version": "0.0.5", "sha256": "0zalvgnibd1kygryqcah5d008y6a0nxpy61yyiqsriw89r01jyjk", - "depends": ["bayesplot", "MASS", "mvtnorm"] + "depends": ["MASS", "bayesplot", "mvtnorm"] }, "hmeasure": { "name": "hmeasure", @@ -71057,7 +71789,7 @@ "name": "hmer", "version": "1.6.0", "sha256": "0536bdrg4cw4kqmx6czzh63b8wia6fhm02fvjv9irlmxqhmy0mxa", - "depends": ["cluster", "dplyr", "GGally", "ggbeeswarm", "ggplot2", "isoband", "lhs", "MASS", "mvtnorm", "pdist", "purrr", "R6", "rlang", "stringr", "viridis"] + "depends": ["GGally", "MASS", "R6", "cluster", "dplyr", "ggbeeswarm", "ggplot2", "isoband", "lhs", "mvtnorm", "pdist", "purrr", "rlang", "stringr", "viridis"] }, "hmm_discnp": { "name": "hmm.discnp", @@ -71069,7 +71801,7 @@ "name": "hmmTMB", "version": "1.0.2", "sha256": "1vrjkq5vv70wjvg588w2q7sd8qhnp4iz3swx8yc3x8w7zpwkf0hn", - "depends": ["CircStats", "ggplot2", "MASS", "Matrix", "mgcv", "optimx", "R6", "RcppEigen", "stringr", "TMB", "tmbstan"] + "depends": ["CircStats", "MASS", "Matrix", "R6", "RcppEigen", "TMB", "ggplot2", "mgcv", "optimx", "stringr", "tmbstan"] }, "hmmm": { "name": "hmmm", @@ -71111,25 +71843,31 @@ "name": "hoardeR", "version": "0.10", "sha256": "0maqypigq2942mqbnr7a11iryv6xhhfrnyarqw3r8z5zimjy1y7p", - "depends": ["bamsignals", "Biostrings", "data_table", "GenomicRanges", "GenomicTools_fileHandler", "httr", "IRanges", "KernSmooth", "knitr", "MASS", "R_utils", "RCurl", "rmarkdown", "Rsamtools", "S4Vectors", "seqinr", "stringr", "XML"] + "depends": ["Biostrings", "GenomicRanges", "GenomicTools_fileHandler", "IRanges", "KernSmooth", "MASS", "RCurl", "R_utils", "Rsamtools", "S4Vectors", "XML", "bamsignals", "data_table", "httr", "knitr", "rmarkdown", "seqinr", "stringr"] }, "hoardr": { "name": "hoardr", "version": "0.5.4", "sha256": "0dws91z1a25ynkdjj3f1lgp6qbgvfgnqi0mw14f4b13m670il0sf", - "depends": ["digest", "R6", "rappdirs"] + "depends": ["R6", "digest", "rappdirs"] }, "hockeystick": { "name": "hockeystick", "version": "0.8.4", "sha256": "0l5sk4x66zalmznksf9c099jn9i2i90bs57h2f44z105hzpdi606", - "depends": ["dplyr", "ggplot2", "jsonlite", "lubridate", "patchwork", "RColorBrewer", "readr", "rvest", "scales", "tibble", "tidyr", "treemapify"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "jsonlite", "lubridate", "patchwork", "readr", "rvest", "scales", "tibble", "tidyr", "treemapify"] + }, + "holi": { + "name": "holi", + "version": "0.1.0", + "sha256": "08q9b4vji3ak75kvkmzx0nb6pmq9bzv6r9rwj1pdk9sj0pswkp3c", + "depends": ["DT", "MASS", "RPostgres", "ggplot2", "likelihoodAsy", "pool", "shiny", "shinythemes", "sn"] }, "holiglm": { "name": "holiglm", "version": "1.0.0", "sha256": "02i6smmwmvbkx351ahjzz247kky377r6ara06c5wk5jrfsfjbbr7", - "depends": ["checkmate", "MASS", "ROI", "ROI_plugin_ecos", "slam", "SuppDists"] + "depends": ["MASS", "ROI", "ROI_plugin_ecos", "SuppDists", "checkmate", "slam"] }, "holland": { "name": "holland", @@ -71141,7 +71879,7 @@ "name": "holodeck", "version": "0.2.2", "sha256": "1phaj4yw01301rgcdv4w44q6y5vxwggmks0xdbvg9i2ak3kjcyfp", - "depends": ["assertthat", "dplyr", "MASS", "purrr", "rlang", "tibble"] + "depends": ["MASS", "assertthat", "dplyr", "purrr", "rlang", "tibble"] }, "homals": { "name": "homals", @@ -71165,19 +71903,19 @@ "name": "homologene", "version": "1.4.68.19.3.27", "sha256": "0d7wxisk0vqk1n165v1i19bc02zv78h5r5d3jqai5y6nkmwn01sh", - "depends": ["dplyr", "magrittr", "purrr", "R_utils", "readr"] + "depends": ["R_utils", "dplyr", "magrittr", "purrr", "readr"] }, "homomorpheR": { "name": "homomorpheR", "version": "0.2-2", "sha256": "1iahq16nswlc3b87598206xdp24bg9v8acyjp1jivybl3fr4k3pq", - "depends": ["gmp", "R6", "sodium"] + "depends": ["R6", "gmp", "sodium"] }, "hoopR": { "name": "hoopR", "version": "2.1.0", "sha256": "1m6ffh7slcqzj28jn9f67n5czidal5nkv6c883sk96w13h3lhyam", - "depends": ["cli", "data_table", "dplyr", "furrr", "future", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "Rcpp", "RcppParallel", "rlang", "rvest", "stringr", "tidyr", "usethis"] + "depends": ["Rcpp", "RcppParallel", "cli", "data_table", "dplyr", "furrr", "future", "glue", "httr", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "rlang", "rvest", "stringr", "tidyr", "usethis"] }, "hopbyhop": { "name": "hopbyhop", @@ -71189,13 +71927,13 @@ "name": "hopit", "version": "0.11.6", "sha256": "13hzzjfj26kk5sfwrbi9lv1yczhnv0z0nlvlnp0y4xm3p0vkiyqp", - "depends": ["MASS", "questionr", "Rcpp", "RcppEigen", "Rdpack", "survey"] + "depends": ["MASS", "Rcpp", "RcppEigen", "Rdpack", "questionr", "survey"] }, "hopkins": { "name": "hopkins", "version": "1.1", "sha256": "0wy4d5mmzd9qka5wpkglqy0m2pswypj64wp4hqpk94c6gj46ghwl", - "depends": ["donut", "pdist", "RANN"] + "depends": ["RANN", "donut", "pdist"] }, "hornpa": { "name": "hornpa", @@ -71231,7 +71969,7 @@ "name": "hot.deck", "version": "1.2", "sha256": "1zdrbqkqh3sbc4pkrqgv230h6jm6fvf3wwpb3y6r9l3g8zh4j18r", - "depends": ["data_table", "MASS", "mice", "tidyr"] + "depends": ["MASS", "data_table", "mice", "tidyr"] }, "hotspot": { "name": "hotspot", @@ -71303,7 +72041,7 @@ "name": "hpiR", "version": "0.3.2", "sha256": "0gz9ngnjgys7hzijsma2iyywwiv7vjar5gls28ds11wq8pmsv96n", - "depends": ["dplyr", "forecast", "ggplot2", "gridExtra", "imputeTS", "lubridate", "magrittr", "MASS", "pdp", "plyr", "purrr", "ranger", "rlang", "robustbase", "zoo"] + "depends": ["MASS", "dplyr", "forecast", "ggplot2", "gridExtra", "imputeTS", "lubridate", "magrittr", "pdp", "plyr", "purrr", "ranger", "rlang", "robustbase", "zoo"] }, "hqmisc": { "name": "hqmisc", @@ -71333,7 +72071,7 @@ "name": "hrqglas", "version": "1.1.0", "sha256": "0v3hdjz8755ka4ahdx2dsyw3513hxg1r0ncj9id6gbmqq1l0s9a5", - "depends": ["MASS", "Matrix", "quantreg", "Rcpp"] + "depends": ["MASS", "Matrix", "Rcpp", "quantreg"] }, "hrt": { "name": "hrt", @@ -71345,7 +72083,7 @@ "name": "hscovar", "version": "0.4.2", "sha256": "06bkqcp0vcnkp0jqi0qjvxnw0lk0w4mrf88h1769ak7r49vzlr6f", - "depends": ["foreach", "Matrix", "pwr", "rlist"] + "depends": ["Matrix", "foreach", "pwr", "rlist"] }, "hse": { "name": "hse", @@ -71357,7 +72095,7 @@ "name": "hsem", "version": "1.0", "sha256": "0dgp65isbfmw0q4sn36l5226sf6vrl7mvn7gn50xvgybh0l6y7vk", - "depends": ["boot", "Matrix", "mvtnorm", "numDeriv"] + "depends": ["Matrix", "boot", "mvtnorm", "numDeriv"] }, "hset": { "name": "hset", @@ -71381,31 +72119,31 @@ "name": "hsrecombi", "version": "1.0.1", "sha256": "1f5ks1wvpc0dn5lwyhs479zhkcbcfg2c5gxxlwr9pliv5ncgcmla", - "depends": ["curl", "data_table", "dplyr", "hsphase", "Matrix", "quadprog", "Rcpp", "rlist"] + "depends": ["Matrix", "Rcpp", "curl", "data_table", "dplyr", "hsphase", "quadprog", "rlist"] }, "hsstan": { "name": "hsstan", "version": "0.8.2", "sha256": "0kfdx17vacy43bjg6si4d1nxbmsrzj61bgs6d5pbwny02fq9i9gc", - "depends": ["BH", "ggplot2", "loo", "pROC", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "loo", "pROC", "rstan", "rstantools"] }, "hstats": { "name": "hstats", - "version": "1.1.2", - "sha256": "00rjki2gb1rhmp4hbhdzpygjzq4j3dnilrg6pmnspqwzja5cfbbj", + "version": "1.2.1", + "sha256": "1my1zxwvdzajp75lxyqmwr7z8ci9ldvlmpqxapyqbj0d5ibn2sbn", "depends": ["ggplot2"] }, "htestClust": { "name": "htestClust", "version": "0.2.2", "sha256": "081kxhc7sn070ys94pfzjf3gi2kkqwrqx2sclbgz4ihahqkbnhhr", - "depends": ["bootstrap", "MASS"] + "depends": ["MASS", "bootstrap"] }, "htetree": { "name": "htetree", "version": "0.1.18", "sha256": "144jn5b79xqr4h190c06wwpa5679125xa9qmnaxqh371h45263gd", - "depends": ["data_tree", "dplyr", "grf", "jsonlite", "Matching", "partykit", "Rcpp", "rpart", "rpart_plot", "shiny", "stringr"] + "depends": ["Matching", "Rcpp", "data_tree", "dplyr", "grf", "jsonlite", "partykit", "rpart", "rpart_plot", "shiny", "stringr"] }, "htm2txt": { "name": "htm2txt", @@ -71427,15 +72165,15 @@ }, "htmlTable": { "name": "htmlTable", - "version": "2.4.2", - "sha256": "039nnxnvw5l284n7w8q0hnplm0b58nwhsrpjfi5asg61f9hxv0va", + "version": "2.4.3", + "sha256": "1pgndsyml68d9qd747043m9g0dxhaa10m533dchcsg1izwdx0f9p", "depends": ["checkmate", "htmltools", "htmlwidgets", "knitr", "magrittr", "rstudioapi", "stringr"] }, "htmldf": { "name": "htmldf", "version": "0.6.0", "sha256": "19brwxqnsxzvgsqq3gsjkcyag9ag3xa3mrl5c4s7x48xx2knfh9q", - "depends": ["cld3", "dplyr", "httr", "lubridate", "magrittr", "processx", "progress", "R_utils", "ranger", "rvest", "stringr", "tibble", "tidyr", "urltools", "xml2"] + "depends": ["R_utils", "cld3", "dplyr", "httr", "lubridate", "magrittr", "processx", "progress", "ranger", "rvest", "stringr", "tibble", "tidyr", "urltools", "xml2"] }, "htmltools": { "name": "htmltools", @@ -71451,21 +72189,21 @@ }, "hts": { "name": "hts", - "version": "6.0.2", - "sha256": "06mmxdm7a2fb1r4mb2x12b00rnkaxlrmlkv5yizr3yixmn4is9wb", - "depends": ["forecast", "Matrix", "Rcpp", "RcppEigen", "SparseM"] + "version": "6.0.3", + "sha256": "04s4ndvlxbjz2hamnhakibj92ipbppf1sj1pfc571lkz2c91ggf9", + "depends": ["Matrix", "Rcpp", "RcppEigen", "SparseM", "forecast"] }, "htsr": { "name": "htsr", - "version": "2.1.4", - "sha256": "1z4s3xn82fq3gh2fp7ys0vifmpgxksi0hvjj9whlkjv2dmsnzqyz", - "depends": ["DBI", "dplyr", "fs", "ggplot2", "lubridate", "purrr", "Rcpp", "readr", "readxl", "RSQLite", "shiny", "shinyFiles", "stringr", "tibble", "waiter", "WriteXLS"] + "version": "2.1.6", + "sha256": "0rk11gnwws6fsmbh9zk5cpxavqkrxd4kja3wzhlh4jn5b4ypblps", + "depends": ["DBI", "RSQLite", "Rcpp", "WriteXLS", "dplyr", "fs", "ggplot2", "lubridate", "purrr", "readr", "readxl", "shiny", "shinyFiles", "stringr", "tibble", "waiter"] }, "httk": { "name": "httk", "version": "2.3.1", "sha256": "1ws9bxrl0r59nni6avvr7qgs866p90l88x9xyfw2s90j5q2zzil5", - "depends": ["data_table", "deSolve", "ggplot2", "magrittr", "msm", "mvtnorm", "purrr", "Rdpack", "survey", "truncnorm"] + "depends": ["Rdpack", "data_table", "deSolve", "ggplot2", "magrittr", "msm", "mvtnorm", "purrr", "survey", "truncnorm"] }, "httpRequest": { "name": "httpRequest", @@ -71519,19 +72257,19 @@ "name": "httpuv", "version": "1.6.15", "sha256": "1l2y435i3dvq7fnalpvc7h5wh0sc5clygdvcvghz77d34cvfsvay", - "depends": ["later", "promises", "R6", "Rcpp"] + "depends": ["R6", "Rcpp", "later", "promises"] }, "httr": { "name": "httr", "version": "1.4.7", "sha256": "0fisvq3zydmqagn7lj6x98zxkcl7l95gfydl27zkigb7zg1fcm8m", - "depends": ["curl", "jsonlite", "mime", "openssl", "R6"] + "depends": ["R6", "curl", "jsonlite", "mime", "openssl"] }, "httr2": { "name": "httr2", - "version": "1.0.1", - "sha256": "1cpi2yr66g0nwd5ybz6254ivggvxql0bas2hwpakrcw1161jvs9k", - "depends": ["cli", "curl", "glue", "lifecycle", "magrittr", "openssl", "R6", "rappdirs", "rlang", "vctrs", "withr"] + "version": "1.0.2", + "sha256": "0j0062wx5xzlr36cs2jh3qji9fin6d2myvl87cdlx7x5fizy7y6i", + "depends": ["R6", "cli", "curl", "glue", "lifecycle", "magrittr", "openssl", "rappdirs", "rlang", "vctrs", "withr"] }, "hubeau": { "name": "hubeau", @@ -71555,7 +72293,7 @@ "name": "huge", "version": "1.3.5", "sha256": "1sl457a1lndrx98y2j9a2smanawx2iqlhl82iand0g3p5xp8ch4j", - "depends": ["igraph", "MASS", "Matrix", "Rcpp", "RcppEigen"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "igraph"] }, "huito": { "name": "huito", @@ -71597,7 +72335,7 @@ "name": "hunspell", "version": "3.0.3", "sha256": "1ws2hhrn3iw89vs17q9claf0cip5hy6rbgdr4dcjmzrdlrri9apx", - "depends": ["digest", "Rcpp"] + "depends": ["Rcpp", "digest"] }, "hurdlr": { "name": "hurdlr", @@ -71609,7 +72347,7 @@ "name": "hurricaneexposure", "version": "0.1.1", "sha256": "0a8xy71dkq2bzdnc90irxmbcxhi0anh87ic22x7b22c3m5605w6s", - "depends": ["data_table", "dplyr", "ggmap", "ggplot2", "lazyeval", "lubridate", "mapproj", "maps", "purrr", "RColorBrewer", "rlang", "stringr", "tidyr"] + "depends": ["RColorBrewer", "data_table", "dplyr", "ggmap", "ggplot2", "lazyeval", "lubridate", "mapproj", "maps", "purrr", "rlang", "stringr", "tidyr"] }, "hutils": { "name": "hutils", @@ -71619,15 +72357,15 @@ }, "hutilscpp": { "name": "hutilscpp", - "version": "0.10.4", - "sha256": "0gjj2808dc4c1s28d94sc1iwb88n61lsplqvhlhn2yab3qa0ljf9", + "version": "0.10.5", + "sha256": "1f4ywd8ibg2349fvp7ypiqyslb64gdqi64fwhnag7d6qhrhm563b", "depends": ["data_table", "hutils", "magrittr"] }, "huxtable": { "name": "huxtable", "version": "5.5.6", "sha256": "04hbnc8gij28523b6kiyibc05sjn1z4y1r8z9j4f5ghyl8hm0mdx", - "depends": ["assertthat", "commonmark", "fansi", "generics", "glue", "htmltools", "memoise", "R6", "rlang", "stringi", "stringr", "tidyselect", "xml2"] + "depends": ["R6", "assertthat", "commonmark", "fansi", "generics", "glue", "htmltools", "memoise", "rlang", "stringi", "stringr", "tidyselect", "xml2"] }, "hwde": { "name": "hwde", @@ -71639,7 +72377,7 @@ "name": "hwep", "version": "2.0.2", "sha256": "0cvy9s9kwc1jp4klgbjahidpk8gkvfa43vry8i0y77nvfys7x9v9", - "depends": ["BH", "bridgesampling", "doFuture", "doRNG", "foreach", "future", "iterators", "pracma", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tensr", "updog"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bridgesampling", "doFuture", "doRNG", "foreach", "future", "iterators", "pracma", "rstan", "rstantools", "tensr", "updog"] }, "hwig": { "name": "hwig", @@ -71675,7 +72413,7 @@ "name": "hySAINT", "version": "1.2.1", "sha256": "1mmw0k63rci7w19livfv7mnsrqjwk0cc51wlyn58ksnf9bbqphch", - "depends": ["energy", "Matrix", "pracma", "selectiveInference", "SIS", "VariableScreening"] + "depends": ["Matrix", "SIS", "VariableScreening", "energy", "pracma", "selectiveInference"] }, "hySpc_testthat": { "name": "hySpc.testthat", @@ -71687,7 +72425,7 @@ "name": "hybridModels", "version": "0.3.7", "sha256": "0fj3dvv7s1hlicvlb077pkhbj894brzgdxhp67jck9zpy2qymzxq", - "depends": ["doParallel", "doRNG", "foreach", "ggplot2", "GillespieSSA", "reshape2", "stringr"] + "depends": ["GillespieSSA", "doParallel", "doRNG", "foreach", "ggplot2", "reshape2", "stringr"] }, "hybridogram": { "name": "hybridogram", @@ -71699,19 +72437,13 @@ "name": "hybridts", "version": "0.1.0", "sha256": "1x96g0cjgn3vklczksxdgpd5ayl3rl63k0ig0h8vacm2nxn4c6js", - "depends": ["forecast", "Metrics", "nnfor", "WaveletArima"] + "depends": ["Metrics", "WaveletArima", "forecast", "nnfor"] }, "hyd1d": { "name": "hyd1d", - "version": "0.5.1", - "sha256": "0ixklk8g3d5bayv4jwprknb1f7pzhxqd60lk8v5j1i6zcpjad0mw", - "depends": ["curl", "httr2", "Rdpack"] - }, - "hydflood": { - "name": "hydflood", - "version": "0.5.7", - "sha256": "18gw2jipssaid5q004gyvfk56vgvajv69kd0f6zh2fp7sgq5w33d", - "depends": ["hyd1d", "raster", "Rdpack", "sf", "terra"] + "version": "0.5.2", + "sha256": "0k34blmjyradfbrq5j6lqkhs64q80k9a5pdrc3anyvanadcz32af", + "depends": ["Rdpack", "curl", "httr2"] }, "hydra": { "name": "hydra", @@ -71765,7 +72497,7 @@ "name": "hydroloom", "version": "1.0.2", "sha256": "0hh8j9a3rkg81mp9als41rvvmwfclbwg92jx6rzy5fn2qvlxx36m", - "depends": ["data_table", "dplyr", "fastmap", "pbapply", "RANN", "rlang", "sf", "tidyr", "units"] + "depends": ["RANN", "data_table", "dplyr", "fastmap", "pbapply", "rlang", "sf", "tidyr", "units"] }, "hydropeak": { "name": "hydropeak", @@ -71789,25 +72521,25 @@ "name": "hydrotoolbox", "version": "1.1.2", "sha256": "0m5crm8n8i3fv43am649cdyrbfcfbais8fwrg6c7zy81dbhmy9m9", - "depends": ["ggplot2", "lubridate", "magrittr", "plotly", "Rcpp", "readxl", "reshape2", "tibble", "zoo"] + "depends": ["Rcpp", "ggplot2", "lubridate", "magrittr", "plotly", "readxl", "reshape2", "tibble", "zoo"] }, "hyfo": { "name": "hyfo", "version": "1.4.6", "sha256": "03z36ddq6vpld1v876adp5xrz0hjy46vhs5sn8sgaa57fhmya6cm", - "depends": ["data_table", "ggplot2", "lmom", "maps", "MASS", "moments", "ncdf4", "plyr", "reshape2", "sf", "sp", "zoo"] + "depends": ["MASS", "data_table", "ggplot2", "lmom", "maps", "moments", "ncdf4", "plyr", "reshape2", "sf", "sp", "zoo"] }, "hyper_fit": { "name": "hyper.fit", "version": "1.2.1", "sha256": "1w6ra4sqdvzcyhsiyi3lgzy9m4ca3898qjdssdfgmarkrc13bk3n", - "depends": ["LaplacesDemon", "magicaxis", "MASS", "rgl"] + "depends": ["LaplacesDemon", "MASS", "magicaxis", "rgl"] }, "hyper2": { "name": "hyper2", "version": "3.1-0", "sha256": "11bn7rhadisb46ls6ph9xbixz9zygd4ivjn3hgbv6059l2f2v0i0", - "depends": ["alabama", "calibrator", "cubature", "disordR", "frab", "magrittr", "partitions", "Rcpp", "Rdpack"] + "depends": ["Rcpp", "Rdpack", "alabama", "calibrator", "cubature", "disordR", "frab", "magrittr", "partitions"] }, "hyperSpec": { "name": "hyperSpec", @@ -71843,7 +72575,7 @@ "name": "hyperoverlap", "version": "1.1.1", "sha256": "10kcphn5zl1pl70xg9bn947i9mbnjxk03p6y7xhdlv152cihffw0", - "depends": ["e1071", "ggplot2", "MASS", "matlib", "misc3d", "rgl"] + "depends": ["MASS", "e1071", "ggplot2", "matlib", "misc3d", "rgl"] }, "hypersampleplan": { "name": "hypersampleplan", @@ -71855,7 +72587,7 @@ "name": "hypervolume", "version": "3.1.4", "sha256": "1vw9s85gr1mv7c21x7rk66bz7wg3nfy874ixrhbcksyrxjq82q3c", - "depends": ["caret", "data_table", "doParallel", "dplyr", "e1071", "fastcluster", "foreach", "geometry", "ggplot2", "hitandrun", "ks", "maps", "MASS", "mvtnorm", "palmerpenguins", "pbapply", "pdist", "progress", "purrr", "raster", "Rcpp", "RcppArmadillo", "sp", "terra"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "caret", "data_table", "doParallel", "dplyr", "e1071", "fastcluster", "foreach", "geometry", "ggplot2", "hitandrun", "ks", "maps", "mvtnorm", "palmerpenguins", "pbapply", "pdist", "progress", "purrr", "raster", "sp", "terra"] }, "hypoRF": { "name": "hypoRF", @@ -71879,13 +72611,13 @@ "name": "hypr", "version": "0.2.8", "sha256": "1l5vfjifnnf711wr3n9zprf78jkq7s2pjvw3vz47jr3234glsrjx", - "depends": ["cli", "magrittr", "MASS", "Matrix", "pracma"] + "depends": ["MASS", "Matrix", "cli", "magrittr", "pracma"] }, "hypsoLoop": { "name": "hypsoLoop", "version": "0.2.0", "sha256": "0kwxzw2r406li2pmby92a3jik4k3z1vdgs54m4q45a8r8vz3y1nn", - "depends": ["dplyr", "ggplot2", "PolynomF", "sf", "sjPlot", "stars", "terra"] + "depends": ["PolynomF", "dplyr", "ggplot2", "sf", "sjPlot", "stars", "terra"] }, "hystReet": { "name": "hystReet", @@ -71903,7 +72635,7 @@ "name": "hysteresis", "version": "2.7.2", "sha256": "0jn8glihvnf6l6gf91cisqi4h1iscp7qqvchkbcvz0mv8cvklmg8", - "depends": ["car", "MASS", "msm"] + "depends": ["MASS", "car", "msm"] }, "hytest": { "name": "hytest", @@ -71921,13 +72653,13 @@ "name": "i2extras", "version": "0.2.1", "sha256": "14k9s5ppq3c7ldh6gqi82awmkk34ac0br0qr42gqba9lrssf4bsr", - "depends": ["ciTools", "data_table", "dplyr", "ggplot2", "incidence2", "MASS", "rlang", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["MASS", "ciTools", "data_table", "dplyr", "ggplot2", "incidence2", "rlang", "tibble", "tidyr", "tidyselect", "vctrs"] }, "iAR": { "name": "iAR", "version": "1.2.0", "sha256": "0svxn81a0yq3m51594zrpy99i8p9zcfjzbxsi19yyfcm6iymzv24", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "ggplot2"] }, "iAdapt": { "name": "iAdapt", @@ -71953,29 +72685,35 @@ "sha256": "1qacvfzknchfm27mhl7a357fnb6lzjkj4vh8lch5aljz82sdmdaf", "depends": ["ggplot2"] }, + "iC10": { + "name": "iC10", + "version": "2.0.2", + "sha256": "0chvkh84qmw0c1m8z1ayl03dq43rj4qglkbammm5fx2vfsbp0hcc", + "depends": ["iC10TrainingData", "impute", "pamr"] + }, "iC10TrainingData": { "name": "iC10TrainingData", - "version": "1.3.1", - "sha256": "175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1", + "version": "2.0.1", + "sha256": "0hab5frxrlxxpxxs13h6x39pp7j6438kdqw55kxy29340ihyg32y", "depends": [] }, "iCAMP": { "name": "iCAMP", "version": "1.5.12", "sha256": "0rx0mjkmlqf5awq387h1bzampvkwp67jbkjz29qmw85ma6vlqbpi", - "depends": ["ape", "bigmemory", "data_table", "DirichletReg", "Hmisc", "minpack_lm", "nortest", "permute", "vegan"] + "depends": ["DirichletReg", "Hmisc", "ape", "bigmemory", "data_table", "minpack_lm", "nortest", "permute", "vegan"] }, "iCARH": { "name": "iCARH", "version": "2.0.2.1", "sha256": "1x703ydssmgb7j0hgqn3d5sh9457jgj7s2m8i12x2b9wvkh0fz8j", - "depends": ["abind", "ggplot2", "glue", "igraph", "KEGGgraph", "MASS", "Matrix", "mc2d", "RCurl", "reshape2", "rstan"] + "depends": ["KEGGgraph", "MASS", "Matrix", "RCurl", "abind", "ggplot2", "glue", "igraph", "mc2d", "reshape2", "rstan"] }, "iCellR": { "name": "iCellR", "version": "1.6.7", "sha256": "043ic1ijp9qycap1bh4s07ql1irzpxzyyk68qryjvqsgf8m33rl0", - "depends": ["ape", "data_table", "ggdendro", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "hdf5r", "Hmisc", "htmlwidgets", "igraph", "jsonlite", "knitr", "Matrix", "NbClust", "pheatmap", "plotly", "plyr", "png", "progress", "RANN", "RColorBrewer", "Rcpp", "reshape", "Rtsne", "scatterplot3d", "shiny", "uwot"] + "depends": ["Hmisc", "Matrix", "NbClust", "RANN", "RColorBrewer", "Rcpp", "Rtsne", "ape", "data_table", "ggdendro", "ggplot2", "ggpubr", "ggrepel", "gridExtra", "hdf5r", "htmlwidgets", "igraph", "jsonlite", "knitr", "pheatmap", "plotly", "plyr", "png", "progress", "reshape", "scatterplot3d", "shiny", "uwot"] }, "iClick": { "name": "iClick", @@ -71983,6 +72721,12 @@ "sha256": "0yq0r9nz1mf9ci6l30ylqxbgl8mf1ahyqzr7m6nks0ygxabipdnd", "depends": ["boot", "car", "coefplot", "fBasics", "forecast", "lattice", "lmtest", "lubridate", "openair", "papeR", "rugarch", "sandwich", "timeDate", "timeSeries", "xts", "zoo"] }, + "iClusterVB": { + "name": "iClusterVB", + "version": "0.1.1", + "sha256": "17jwpl1h7khcz6isix88ia95p1fldl2mh4lsjiyfi1adyylqpvdq", + "depends": ["MCMCpack", "R_utils", "Rcpp", "RcppArmadillo", "VarSelLCM", "clustMixType", "cluster", "cowplot", "ggplot2", "inline", "mclust", "mvtnorm", "pheatmap", "poLCA"] + }, "iDINGO": { "name": "iDINGO", "version": "1.0.4", @@ -72017,13 +72761,13 @@ "name": "iGasso", "version": "1.6.1", "sha256": "050jq6b4k8k8hj0cbxz6dzzjp5lgp8bf00aq9jxwb74pmvmsrlwq", - "depends": ["CompQuadForm", "lattice", "MASS", "MBESS"] + "depends": ["CompQuadForm", "MASS", "MBESS", "lattice"] }, "iGraphMatch": { "name": "iGraphMatch", "version": "2.0.5", "sha256": "1cbmcqvw8xk55lv3nxj3xzmkasvaayv04xnzqjdr16yvjznpzkfd", - "depends": ["clue", "igraph", "irlba", "Matrix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "clue", "igraph", "irlba"] }, "iIneq": { "name": "iIneq", @@ -72047,18 +72791,18 @@ "name": "iNEXT", "version": "3.0.1", "sha256": "1nf4jhwqx5im966qzq7si78c5q4jgsa73d74ya8q8aj02n49jcyy", - "depends": ["ggplot2", "Rcpp", "reshape2"] + "depends": ["Rcpp", "ggplot2", "reshape2"] }, "iNEXT_3D": { "name": "iNEXT.3D", "version": "1.0.5", "sha256": "1dpfwf95sin8yn9mn60d9jappsq1spm02x4p0ikjj637qwisgpjs", - "depends": ["ape", "dplyr", "ggplot2", "phyclust", "Rcpp", "reshape2", "tibble", "tidytree"] + "depends": ["Rcpp", "ape", "dplyr", "ggplot2", "phyclust", "reshape2", "tibble", "tidytree"] }, "iNEXT_4steps": { "name": "iNEXT.4steps", - "version": "1.0.0", - "sha256": "0kjzrgwhhzgvwyrcrqfbshscyrx34blfjxr23iay9wby6qpfmb1j", + "version": "1.0.1", + "sha256": "0c5721zj5kcf6cajg57xq3s4gcwa8mib3401mfn2l36ymd5k7vmk", "depends": ["dplyr", "ggplot2", "ggpubr", "iNEXT_3D", "purrr", "reshape2"] }, "iNEXT_beta3D": { @@ -72083,7 +72827,7 @@ "name": "iNZightRegression", "version": "1.3.4", "sha256": "0zqfb25gz4dwf0hqccgq3pb5wv2zmkw3ldkpscwkmc12pz2xm7im", - "depends": ["car", "dplyr", "GGally", "ggplot2", "ggrepel", "ggtext", "iNZightPlots", "multcomp", "patchwork"] + "depends": ["GGally", "car", "dplyr", "ggplot2", "ggrepel", "ggtext", "iNZightPlots", "multcomp", "patchwork"] }, "iNZightTS": { "name": "iNZightTS", @@ -72097,6 +72841,12 @@ "sha256": "0qmpj8hwg4gmbyhp4r1li3rrq2f5743kg04r7s7ii0j9gwsw3y0s", "depends": ["DBI", "dplyr", "forcats", "glue", "magrittr", "purrr", "readr", "rlang", "srvyr", "stringr", "survey", "tibble", "tidyr", "units"] }, + "iPRISM": { + "name": "iPRISM", + "version": "0.1.1", + "sha256": "0zn139a3pfwhsxb1564n7fxw0qv96lhaipl0yjns8by7vc3pv6pi", + "depends": ["Hmisc", "Matrix", "ggplot2", "igraph", "pbapply", "tidyr"] + }, "iRafNet": { "name": "iRafNet", "version": "1.1-1", @@ -72137,19 +72887,19 @@ "name": "iSubGen", "version": "1.0.1", "sha256": "0kfrgh4399x71mwa5j36nfszd65ybp61fwpc7qj3j9ypmgidwbaj", - "depends": ["cluster", "ConsensusClusterPlus", "keras", "philentropy", "tensorflow"] + "depends": ["ConsensusClusterPlus", "cluster", "keras", "philentropy", "tensorflow"] }, "iTOP": { "name": "iTOP", "version": "1.0.2", "sha256": "1n6nlmmx2h63nksycgzr7qsnd1j6bxa629av7cfd3ihriim7dj47", - "depends": ["corpcor", "Matrix"] + "depends": ["Matrix", "corpcor"] }, "iTensor": { "name": "iTensor", "version": "1.0.2", "sha256": "09js2kiw1prrkn03srz4xas37mwbx85zkawfb93wgl292r31j2x9", - "depends": ["einsum", "geigen", "groupICA", "jointDiag", "MASS", "mgcv", "mixOmics", "rTensor"] + "depends": ["MASS", "einsum", "geigen", "groupICA", "jointDiag", "mgcv", "mixOmics", "rTensor"] }, "iWeigReg": { "name": "iWeigReg", @@ -72171,9 +72921,9 @@ }, "iai": { "name": "iai", - "version": "1.10.0", - "sha256": "17ap6zsbcvm8n5y7i6vssc705ra5ll91yvppg08v8252wzxarr31", - "depends": ["cowplot", "ggplot2", "JuliaCall", "lifecycle", "rappdirs", "rjson", "rlang", "stringr"] + "version": "1.10.1", + "sha256": "1fqa3gig417yc72yvw0phaiv799f91yf9c4yvj0biw1midw6fmcb", + "depends": ["JuliaCall", "cowplot", "ggplot2", "lifecycle", "rappdirs", "rjson", "rlang", "stringr"] }, "ialiquor": { "name": "ialiquor", @@ -72191,13 +72941,13 @@ "name": "iarm", "version": "0.4.3", "sha256": "0ib8b37inq1hdzjm9y9bvk8x1qzn08vkvj3y75gg1swsqxh8w106", - "depends": ["eRm", "ggplot2", "gridExtra", "Hmisc", "psychotools", "vcdExtra"] + "depends": ["Hmisc", "eRm", "ggplot2", "gridExtra", "psychotools", "vcdExtra"] }, "ib": { "name": "ib", "version": "0.2.0", "sha256": "10h3b9ncz59rp8j628axnrl7gksjiyg576672dhcyd3ygd4by7p5", - "depends": ["betareg", "Formula", "lme4", "MASS", "Matrix", "Rdpack", "VGAM"] + "depends": ["Formula", "MASS", "Matrix", "Rdpack", "VGAM", "betareg", "lme4"] }, "ibawds": { "name": "ibawds", @@ -72219,9 +72969,9 @@ }, "ibdsim2": { "name": "ibdsim2", - "version": "2.0.0", - "sha256": "0s0mnyhd0xcrr75qhqwgyipn22hlbgjf9nfi7gxbmwns16g3crb8", - "depends": ["ggplot2", "glue", "pedtools", "Rcpp", "ribd"] + "version": "2.1.0", + "sha256": "0bgjhfsplqs4j20x2d1mdhqpdjfnvicgzac62mv4284blzjhnz2d", + "depends": ["Rcpp", "ggplot2", "glue", "pedtools", "ribd"] }, "ibelief": { "name": "ibelief", @@ -72239,7 +72989,7 @@ "name": "ibmAcousticR", "version": "0.2.1", "sha256": "1hrd2273n9fgi3hgjissjn4syw914mxm4wr98ij819yahsi9aj42", - "depends": ["httr", "jsonlite", "XML"] + "depends": ["XML", "httr", "jsonlite"] }, "ibmcraftr": { "name": "ibmcraftr", @@ -72251,7 +73001,7 @@ "name": "ibmdbR", "version": "1.51.0", "sha256": "13wlidv15dn1adx59zx30jnqc9wxl8c2xp1nh3g3dcafsfin9lvj", - "depends": ["arules", "MASS", "Matrix", "RODBC", "rpart", "rpart_plot"] + "depends": ["MASS", "Matrix", "RODBC", "arules", "rpart", "rpart_plot"] }, "ibmsunburst": { "name": "ibmsunburst", @@ -72281,7 +73031,7 @@ "name": "icRSF", "version": "1.2", "sha256": "1a7046lspk70cvrvzwzhnqcmc3cqa5a9bmzlw012jvcn39m2ca3l", - "depends": ["icensmis", "Rcpp"] + "depends": ["Rcpp", "icensmis"] }, "ica": { "name": "ica", @@ -72311,7 +73061,7 @@ "name": "iccCounts", "version": "1.1.2", "sha256": "1g9fb42pdfa4jwwp789v22xzr9y69vf4ff06g2avxcv5s792i84w", - "depends": ["Deriv", "dplyr", "ggplot2", "glmmTMB", "gridExtra", "VGAM"] + "depends": ["Deriv", "VGAM", "dplyr", "ggplot2", "glmmTMB", "gridExtra"] }, "iccTraj": { "name": "iccTraj", @@ -72323,7 +73073,7 @@ "name": "iccbeta", "version": "1.2.0", "sha256": "03ms1c8qpbgxabj3hh4n0gwcazw6cd0cvixck5rz8fkvj04xzjak", - "depends": ["lme4", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "lme4"] }, "iccde": { "name": "iccde", @@ -72359,13 +73109,13 @@ "name": "icenReg", "version": "2.0.16", "sha256": "1wnhxvqh3nc1r6aywbmqq9npbmayb7fx7fghsfspd1ny7mdrhqn1", - "depends": ["coda", "foreach", "MLEcens", "Rcpp", "RcppEigen", "survival"] + "depends": ["MLEcens", "Rcpp", "RcppEigen", "coda", "foreach", "survival"] }, "icensBKL": { "name": "icensBKL", "version": "1.5", "sha256": "1jfms9dih8r5zw9cw32qnvv5ffzqhzm9q6pvwn0nk95531xvbp0a", - "depends": ["gtools", "Icens", "MASS", "mvtnorm", "smoothSurv", "survival", "TeachingDemos"] + "depends": ["Icens", "MASS", "TeachingDemos", "gtools", "mvtnorm", "smoothSurv", "survival"] }, "icensmis": { "name": "icensmis", @@ -72377,7 +73127,7 @@ "name": "icertool", "version": "0.0.3", "sha256": "0wwkqcvjmv2z8a8j597c2fjjcka1jz932i94rmqxcy31brvbi2nl", - "depends": ["digest", "DT", "ggplot2", "ggrepel", "purrr", "readxl", "shiny", "shinyhelper", "shinythemes", "tidyverse"] + "depends": ["DT", "digest", "ggplot2", "ggrepel", "purrr", "readxl", "shiny", "shinyhelper", "shinythemes", "tidyverse"] }, "icesAdvice": { "name": "icesAdvice", @@ -72397,41 +73147,17 @@ "sha256": "0xhv95zs1bwxplvvdh2flx9v97zwvc8pvckwfjxcrff64vxxb0f1", "depends": [] }, - "icesDatsu": { - "name": "icesDatsu", - "version": "1.1.0", - "sha256": "0vprh8y6x28q33b6zx9qhq991q0aqn5rhccf44k8211n5dwa555k", - "depends": ["httr", "icesConnect", "jsonlite"] - }, - "icesDatsuQC": { - "name": "icesDatsuQC", - "version": "1.0.1", - "sha256": "0pspd702vg2k7fza9jvj7hdnpjlg4k41mwiq45k7bsr0cbksggsg", - "depends": ["icesDatsu", "sqldf"] - }, "icesSAG": { "name": "icesSAG", "version": "1.4.1", "sha256": "0dsjsn3qx3k7grjgqsj120valzga7vjlj6jb8mfwmi85gmvlx329", "depends": ["httr", "icesVocab", "openssl", "png", "xml2"] }, - "icesSD": { - "name": "icesSD", - "version": "2.0.0", - "sha256": "1k0i79hh63bmsqw5m6ym2h3dydrjji57lkysp5n9x293lgh04pf2", - "depends": ["httr", "icesConnect"] - }, "icesTAF": { "name": "icesTAF", "version": "4.2.0", "sha256": "0xifza8s24gy09fibqdpkh0zc723jkx09ycx44gqffrx0ch8syds", - "depends": ["data_tree", "purrr", "roxygen2", "TAF"] - }, - "icesVMS": { - "name": "icesVMS", - "version": "1.1.4", - "sha256": "0ppml34s4zz3vav08fjaj71bml8amaslw22zmib0scvw8k70jlir", - "depends": ["glue", "httr", "icesConnect", "icesVocab"] + "depends": ["TAF", "data_tree", "purrr", "roxygen2"] }, "icesVocab": { "name": "icesVocab", @@ -72441,9 +73167,9 @@ }, "ichimoku": { "name": "ichimoku", - "version": "1.5.2", - "sha256": "0ssvsdkzh9mk6jcg88sljgqdcwwbwy55si855mk8ihpcddvsy61x", - "depends": ["ggplot2", "mirai", "nanonext", "RcppSimdJson", "secretbase", "shiny", "xts", "zoo"] + "version": "1.5.4", + "sha256": "09s7x956bx84z9ci017zzf96306wwdy78v1jaknps2rl85xfh0bi", + "depends": ["RcppSimdJson", "ggplot2", "mirai", "nanonext", "secretbase", "shiny", "xts", "zoo"] }, "icmm": { "name": "icmm", @@ -72453,9 +73179,15 @@ }, "icosa": { "name": "icosa", - "version": "0.11.0", - "sha256": "1z1xajdg7q5n3ijjy45klrh4q3i855afl9088f42dwidyban3w3h", - "depends": ["igraph", "Rcpp", "sf", "sp"] + "version": "0.11.1", + "sha256": "07jg847p3x0i8rim10bvj8v6jkms4m547rwy9h8s5n3rc6dxnizp", + "depends": ["Rcpp", "igraph", "sf", "sp"] + }, + "icpack": { + "name": "icpack", + "version": "0.1.0", + "sha256": "07vc910g7xy7drvd3ry4xw4j7gw34hvgnmafwwycc1ff060pjj6k", + "depends": ["checkmate", "dplyr", "ggplot2", "gridExtra", "matrixStats", "reshape2", "rlang", "survival"] }, "icpsrdata": { "name": "icpsrdata", @@ -72485,7 +73217,7 @@ "name": "idar", "version": "1.5", "sha256": "0433kyhwzaicb10jmb6b6b6lbfhd5g2zsdrg6v02lndb2j7dlk5c", - "depends": ["ape", "FD", "picante", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random"] + "depends": ["FD", "ape", "picante", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random"] }, "idarps": { "name": "idarps", @@ -72503,7 +73235,7 @@ "name": "idcnrba", "version": "1.1.0", "sha256": "0kdsvp263q28fs0qdvrjshp02n6r01zwjj7sj7r24rxppn77xa40", - "depends": ["base64enc", "dplyr", "DT", "flexdashboard", "haven", "htmlwidgets", "markdown", "miniUI", "nrba", "openxlsx", "readr", "rmarkdown", "rstudioapi", "shiny", "shinyjs", "srvyr", "survey", "tibble"] + "depends": ["DT", "base64enc", "dplyr", "flexdashboard", "haven", "htmlwidgets", "markdown", "miniUI", "nrba", "openxlsx", "readr", "rmarkdown", "rstudioapi", "shiny", "shinyjs", "srvyr", "survey", "tibble"] }, "ideamdb": { "name": "ideamdb", @@ -72515,13 +73247,13 @@ "name": "idefix", "version": "1.0.3", "sha256": "0jqjrg0qfzij5bx8r60wpjghsxnszdxgp58ynj10n7q9hc4fhsys", - "depends": ["dfidx", "dplyr", "MASS", "Rcpp", "RcppArmadillo", "Rdpack", "scales", "shiny", "tmvtnorm"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "Rdpack", "dfidx", "dplyr", "scales", "shiny", "tmvtnorm"] }, "idem": { "name": "idem", "version": "5.2", "sha256": "0vgxrw7rdhnxrrsg46x6nd2zx938j1z41fr4gp9pjmh2q6rnnaxl", - "depends": ["BH", "mice", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sqldf", "StanHeaders", "survival"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "mice", "rstan", "rstantools", "sqldf", "survival"] }, "idendr0": { "name": "idendr0", @@ -72607,18 +73339,6 @@ "sha256": "0xaxrlalyn8w0w4fva8fd86306nvw3iyz44r0hvay3gsrmgn3fjh", "depends": [] }, - "iemisc": { - "name": "iemisc", - "version": "1.0.5", - "sha256": "0dr9p4y0vdwxsd5dqp5ahqnv1sfckb3xy9i0bbas009g5hnzxp92", - "depends": ["anytime", "assertthat", "berryFunctions", "checkmate", "chem_databases", "data_table", "foreach", "fpCompare", "geosphere", "ggplot2", "ggpubr", "gsubfn", "iemiscdata", "lubridate", "matlab", "matlab2r", "measurements", "mgsub", "pracma", "qdapRegex", "ramify", "rivr", "roperators", "round", "sf", "signal", "sjmisc", "stringi", "units", "USA_state_boundaries", "zoo"] - }, - "iemiscdata": { - "name": "iemiscdata", - "version": "1.0.2", - "sha256": "1wsakabhj9majl4w63bpc95ccdvfg7xz9arj0ikvdj6dh1ardac6", - "depends": [] - }, "iemisctext": { "name": "iemisctext", "version": "1.0.1", @@ -72627,9 +73347,9 @@ }, "ieugwasr": { "name": "ieugwasr", - "version": "1.0.0", - "sha256": "0pgx2ii23rvflvz55hf31956rzp8y4avski27i2xmx3gqydzhgqr", - "depends": ["dplyr", "httr", "jsonlite"] + "version": "1.0.1", + "sha256": "0kicfbjv50d75si4dw9s5528l4pl8v7qhpw6y89sawgbj0fwrprr", + "depends": ["dplyr", "httr", "jsonlite", "magrittr"] }, "ifCNVR": { "name": "ifCNVR", @@ -72641,7 +73361,7 @@ "name": "ifaTools", "version": "0.23", "sha256": "16xf3165gkmh3f9843m0n4wqdwwdfs6rjh64qcpz8srsm2z5y3l2", - "depends": ["ggplot2", "OpenMx", "reshape2", "rpf", "shiny"] + "depends": ["OpenMx", "ggplot2", "reshape2", "rpf", "shiny"] }, "ifctools": { "name": "ifctools", @@ -72689,7 +73409,7 @@ "name": "iglu", "version": "4.1.6", "sha256": "1v73715hjmmyn1264m0q1skirvgfjwx316vlslysr5bvbcwggljf", - "depends": ["caTools", "dplyr", "DT", "ggplot2", "ggpubr", "gridExtra", "gtable", "hms", "lubridate", "magrittr", "patchwork", "pheatmap", "plotly", "scales", "shiny", "tibble", "tidyr", "zoo"] + "depends": ["DT", "caTools", "dplyr", "ggplot2", "ggpubr", "gridExtra", "gtable", "hms", "lubridate", "magrittr", "patchwork", "pheatmap", "plotly", "scales", "shiny", "tibble", "tidyr", "zoo"] }, "igoR": { "name": "igoR", @@ -72697,11 +73417,17 @@ "sha256": "06f9f363zf1k026a0xg5myydzhgl6kgkqp74sz0jwgl44j2zp44s", "depends": [] }, + "igr": { + "name": "igr", + "version": "0.1.1", + "sha256": "0kb3jnh2z1fklbhf00cf8s2l3kd3g3nim4dllyc59ivgj66a5yf8", + "depends": ["sf"] + }, "igraph": { "name": "igraph", "version": "2.0.3", "sha256": "0xlg5lxzr8dc260fii43chsspqvb962i1yrcars988b78lnig2lf", - "depends": ["cli", "cpp11", "lifecycle", "magrittr", "Matrix", "pkgconfig", "rlang", "vctrs"] + "depends": ["Matrix", "cli", "cpp11", "lifecycle", "magrittr", "pkgconfig", "rlang", "vctrs"] }, "igraphdata": { "name": "igraphdata", @@ -72743,7 +73469,7 @@ "name": "iheatmapr", "version": "0.7.1", "sha256": "1c4dvp0mvw3m6x0kdw05yja2rm1mkrjjmjfj67f0vvs5sqyaqwhv", - "depends": ["fastcluster", "ggdendro", "htmlwidgets", "jsonlite", "knitr", "magrittr", "RColorBrewer", "scales"] + "depends": ["RColorBrewer", "fastcluster", "ggdendro", "htmlwidgets", "jsonlite", "knitr", "magrittr", "scales"] }, "iheiddown": { "name": "iheiddown", @@ -72759,9 +73485,9 @@ }, "iimi": { "name": "iimi", - "version": "1.0.2", - "sha256": "1bkxbqxa6i42mvz7j3191pzd2z35pqbzmn2b0kgbijlrfv8rg18z", - "depends": ["Biostrings", "caret", "data_table", "dplyr", "GenomicAlignments", "IRanges", "mltools", "MTPS", "R_utils", "randomForest", "Rsamtools", "stringr", "xgboost"] + "version": "1.1.1", + "sha256": "05v6j1mmygr67jsgv68b506xabpnl912hxyrz02l87xfb69c5cv8", + "depends": ["Biostrings", "GenomicAlignments", "IRanges", "MTPS", "R_utils", "Rdpack", "Rsamtools", "caret", "data_table", "dplyr", "mltools", "randomForest", "stringr", "xgboost"] }, "ijtiff": { "name": "ijtiff", @@ -72779,7 +73505,7 @@ "name": "imabc", "version": "1.0.0", "sha256": "1p420jlvqqcqdjqp7y4mcjkzimw3qiygph5yrvmm75znax3fkg4z", - "depends": ["data_table", "foreach", "lhs", "MASS", "truncnorm"] + "depends": ["MASS", "data_table", "foreach", "lhs", "truncnorm"] }, "image_CannyEdges": { "name": "image.CannyEdges", @@ -72821,7 +73547,7 @@ "name": "image.binarization", "version": "0.1.3", "sha256": "03p06qmv1s5i08hw4616qf7dqyqp3hrcibz1w66bh5dzv6yl9j7c", - "depends": ["magick", "Rcpp"] + "depends": ["Rcpp", "magick"] }, "image_dlib": { "name": "image.dlib", @@ -72839,7 +73565,7 @@ "name": "image.textlinedetector", "version": "0.2.3", "sha256": "0cymn7swlrmqlkjs3cih8l53xqgjhiimnmlnagzzwd72ijikz1ll", - "depends": ["magick", "Rcpp"] + "depends": ["Rcpp", "magick"] }, "image2data": { "name": "image2data", @@ -72851,13 +73577,13 @@ "name": "imageData", "version": "0.1-62", "sha256": "1q5s6zda1vvinp23afxjys3zl17xaidb11a7iibxpz6rla75183d", - "depends": ["dae", "GGally", "ggplot2", "Hmisc", "RColorBrewer", "readxl", "reshape"] + "depends": ["GGally", "Hmisc", "RColorBrewer", "dae", "ggplot2", "readxl", "reshape"] }, "imagefluency": { "name": "imagefluency", "version": "0.2.5", "sha256": "1vvr66a3mr6gyhs0acymics9k6k9lq6kbmpy0k86z91fb34pipfz", - "depends": ["magick", "OpenImageR", "pracma", "R_utils", "readbitmap"] + "depends": ["OpenImageR", "R_utils", "magick", "pracma", "readbitmap"] }, "imagefx": { "name": "imagefx", @@ -72869,13 +73595,13 @@ "name": "imager", "version": "1.0.2", "sha256": "0sjn3ig5p020gml200cy5bdbrbql7qv1fqhhzjpcbmhprf39113w", - "depends": ["downloader", "igraph", "jpeg", "magrittr", "png", "purrr", "Rcpp", "readbitmap", "stringr"] + "depends": ["Rcpp", "downloader", "igraph", "jpeg", "magrittr", "png", "purrr", "readbitmap", "stringr"] }, "imagerExtra": { "name": "imagerExtra", "version": "1.3.2", "sha256": "1f6mxfn7am4ph9acbbx53r4bk4vsm73p7arh8rvrsic9pgma3gqf", - "depends": ["fftwtools", "imager", "magrittr", "Rcpp"] + "depends": ["Rcpp", "fftwtools", "imager", "magrittr"] }, "imageseg": { "name": "imageseg", @@ -72901,29 +73627,35 @@ "sha256": "0kf6fka9zplp8r9rdndd5n7hypf1lp8hbv2djswav1wp95knzqhg", "depends": ["Rcpp", "RcppArmadillo"] }, + "imanr": { + "name": "imanr", + "version": "1.0.2", + "sha256": "1lkgyq4nkyjdz3hgygrx9gjcwhrvcnbwwq5s3a7qrcgl8gn8ls49", + "depends": ["caret", "doParallel", "dplyr", "foreach", "missForest", "ranger"] + }, "imbalance": { "name": "imbalance", "version": "1.0.2.1", "sha256": "14f7p3x8818b1asfynp3w4sxdacsd14dzs7r166s1jdadwwfwi1s", - "depends": ["bnlearn", "C50", "FNN", "ggplot2", "KernelKnn", "mvtnorm", "Rcpp", "RcppArmadillo", "smotefamily"] + "depends": ["C50", "FNN", "KernelKnn", "Rcpp", "RcppArmadillo", "bnlearn", "ggplot2", "mvtnorm", "smotefamily"] }, "imbalanceDatRel": { "name": "imbalanceDatRel", "version": "0.1.5", "sha256": "017z434pshsc2v8w1nlrvlf6dswdjk060flrn951n59vdzvl5rhj", - "depends": ["RANN", "rcccd", "Rfast", "SMOTEWB"] + "depends": ["RANN", "Rfast", "SMOTEWB", "rcccd"] }, "imbibe": { "name": "imbibe", "version": "0.1.1", "sha256": "03vaz5vippnmbgs2l4gxpmsnrkxjw7d156ng13r07zicq43g9gwp", - "depends": ["magrittr", "Rcpp", "RNifti"] + "depends": ["RNifti", "Rcpp", "magrittr"] }, "imcExperiment": { "name": "imcExperiment", "version": "0.99.0", "sha256": "0fagasb94q7gxx49c7n4p2cb9j3n5qnfx86s7nvz4naicy96qbyr", - "depends": ["S4Vectors", "SingleCellExperiment", "spatstat_geom", "SummarizedExperiment"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "spatstat_geom"] }, "imdbapi": { "name": "imdbapi", @@ -72933,8 +73665,8 @@ }, "imf_data": { "name": "imf.data", - "version": "0.1.5", - "sha256": "1p9jk3m4d87ly1h2g14mqfnkry0ydvvb44kicxnn4xy1pi1jqhxq", + "version": "0.1.6", + "sha256": "081p2vv022c3585j9dqalqgk8y1gnx0z7h0mwh57dmk8adbb1zb0", "depends": ["curl", "jsonlite"] }, "imgpalr": { @@ -72945,8 +73677,8 @@ }, "imgrec": { "name": "imgrec", - "version": "0.1.3", - "sha256": "0va04b264v2ywvqdgmvigygsd5f6vdy5cj2ip2nsyi1fzh68hadx", + "version": "0.1.4", + "sha256": "14qn4pvg9g57xmj1dgsdybmc30rj2gfdby52pzvcjzyfsbxw8hch", "depends": ["base64enc", "dplyr", "httr", "jsonlite", "knitr", "rlang"] }, "imguR": { @@ -72959,31 +73691,31 @@ "name": "iml", "version": "0.11.3", "sha256": "1d0p41byqpw7niyyyqcj00y43dmhqrm2csmbarcy8mz7n0i1842b", - "depends": ["checkmate", "data_table", "Formula", "future", "future_apply", "ggplot2", "Metrics", "R6"] + "depends": ["Formula", "Metrics", "R6", "checkmate", "data_table", "future", "future_apply", "ggplot2"] }, "immcp": { "name": "immcp", "version": "1.0.3", "sha256": "0xjk0a1dr45rnf6fzir74805winn1wppci2wk7wr2pwpmba86vzq", - "depends": ["arules", "clusterProfiler", "DOSE", "dplyr", "factoextra", "ggheatmap", "ggplot2", "igraph", "magrittr", "Matrix", "openxlsx", "org_Hs_eg_db", "pbapply", "proxyC", "purrr", "rlang", "visNetwork"] + "depends": ["DOSE", "Matrix", "arules", "clusterProfiler", "dplyr", "factoextra", "ggheatmap", "ggplot2", "igraph", "magrittr", "openxlsx", "org_Hs_eg_db", "pbapply", "proxyC", "purrr", "rlang", "visNetwork"] }, "immer": { "name": "immer", "version": "1.5-13", "sha256": "0fw657vq0rj00kgkwam9wahf8sg9rf4jh0jmy154q6hq9f80v299", - "depends": ["CDM", "coda", "psychotools", "Rcpp", "RcppArmadillo", "sirt", "TAM"] + "depends": ["CDM", "Rcpp", "RcppArmadillo", "TAM", "coda", "psychotools", "sirt"] }, "immunarch": { "name": "immunarch", "version": "0.9.1", "sha256": "0z44z74zvb1ci931n8zxpvs36cpwx5my6qd77c4z50bgn2hr00rf", - "depends": ["airr", "ape", "circlize", "data_table", "doParallel", "dplyr", "dtplyr", "factoextra", "fpc", "ggalluvial", "ggplot2", "ggpubr", "ggraph", "ggrepel", "ggseqlogo", "glue", "igraph", "jsonlite", "magrittr", "MASS", "patchwork", "phangorn", "pheatmap", "plyr", "purrr", "Rcpp", "readr", "readxl", "reshape2", "rlang", "rlist", "Rtsne", "scales", "shiny", "shinythemes", "stringdist", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "UpSetR", "uuid"] + "depends": ["MASS", "Rcpp", "Rtsne", "UpSetR", "airr", "ape", "circlize", "data_table", "doParallel", "dplyr", "dtplyr", "factoextra", "fpc", "ggalluvial", "ggplot2", "ggpubr", "ggraph", "ggrepel", "ggseqlogo", "glue", "igraph", "jsonlite", "magrittr", "patchwork", "phangorn", "pheatmap", "plyr", "purrr", "readr", "readxl", "reshape2", "rlang", "rlist", "scales", "shiny", "shinythemes", "stringdist", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "uuid"] }, "immuneSIM": { "name": "immuneSIM", "version": "0.8.7", "sha256": "0brj12xnkzmn3n91vb39fq3q68wmzmwx9l38dl38yypp0l8pknjl", - "depends": ["Biostrings", "data_table", "ggplot2", "ggthemes", "igraph", "Metrics", "plyr", "poweRlaw", "RColorBrewer", "repmis", "reshape2", "stringdist", "stringr"] + "depends": ["Biostrings", "Metrics", "RColorBrewer", "data_table", "ggplot2", "ggthemes", "igraph", "plyr", "poweRlaw", "repmis", "reshape2", "stringdist", "stringr"] }, "imola": { "name": "imola", @@ -72995,19 +73727,19 @@ "name": "imp4p", "version": "1.2", "sha256": "1ld8bjjrlij9m7xns7izibag9mndrfh21xgq1w7g3bh5ag9p9fs0", - "depends": ["Iso", "missForest", "missMDA", "norm", "Rcpp", "truncnorm"] + "depends": ["Iso", "Rcpp", "missForest", "missMDA", "norm", "truncnorm"] }, "impactflu": { "name": "impactflu", "version": "0.1.0", "sha256": "0wpaq2q61g6hl9fffs5cjbzdz1qc8dxsbknfs0iarwkn08460bn5", - "depends": ["dplyr", "glue", "lubridate", "magrittr", "Rcpp", "rlang", "tibble"] + "depends": ["Rcpp", "dplyr", "glue", "lubridate", "magrittr", "rlang", "tibble"] }, "impactr": { "name": "impactr", "version": "0.4.2", "sha256": "1lqvq3fa4n6nnq1fb4bbq5ql4aph5r8m9y0d87kk2k93fvw06yvx", - "depends": ["glue", "lubridate", "lvmisc", "pillar", "pracma", "purrr", "Rcpp", "rlang", "signal", "stringr", "tibble", "toOrdinal", "vroom"] + "depends": ["Rcpp", "glue", "lubridate", "lvmisc", "pillar", "pracma", "purrr", "rlang", "signal", "stringr", "tibble", "toOrdinal", "vroom"] }, "impimp": { "name": "impimp", @@ -73037,7 +73769,7 @@ "name": "implyr", "version": "0.5.0", "sha256": "0kl4zsa1aw86mgj5kds8xxn3z9hgdb7nf5wrwhzn3wpa4yawx4r8", - "depends": ["assertthat", "DBI", "dbplyr", "dplyr", "rlang", "tidyselect"] + "depends": ["DBI", "assertthat", "dbplyr", "dplyr", "rlang", "tidyselect"] }, "r_import": { "name": "import", @@ -73085,7 +73817,7 @@ "name": "imputeFin", "version": "0.1.2", "sha256": "11qd43zs8gd3fg3f47lrb6b4r0w7kxczain61bxc67ppzflrafmd", - "depends": ["magrittr", "MASS", "mvtnorm", "zoo"] + "depends": ["MASS", "magrittr", "mvtnorm", "zoo"] }, "imputeGeneric": { "name": "imputeGeneric", @@ -73103,7 +73835,7 @@ "name": "imputeMulti", "version": "0.8.4", "sha256": "0192wzmz5114aq0nxlysjjkcylfkgpz3f214wqry5lpz0219lr79", - "depends": ["data_table", "gtools", "Rcpp"] + "depends": ["Rcpp", "data_table", "gtools"] }, "imputeR": { "name": "imputeR", @@ -73121,7 +73853,7 @@ "name": "imputeTS", "version": "3.3", "sha256": "0y5nam1flciw4sbnzbjsjakmvznfvlpxh1y5d48g4pn5173bxzgx", - "depends": ["forecast", "ggplot2", "ggtext", "magrittr", "Rcpp", "stinepack"] + "depends": ["Rcpp", "forecast", "ggplot2", "ggtext", "magrittr", "stinepack"] }, "imputeTestbench": { "name": "imputeTestbench", @@ -73133,7 +73865,7 @@ "name": "imsig", "version": "1.1.3", "sha256": "175is0b39grc609dskv9274czv4iwnmlg81dl4nr01xdp6f7g487", - "depends": ["ggplot2", "gridExtra", "HiClimR", "igraph", "RColorBrewer", "survival"] + "depends": ["HiClimR", "RColorBrewer", "ggplot2", "gridExtra", "igraph", "survival"] }, "in2extRemes": { "name": "in2extRemes", @@ -73151,7 +73883,7 @@ "name": "inTrees", "version": "1.4", "sha256": "18gbw7v4xbsxdifk32qga3h3j17w40ljs1mkk0b4fzwin9z4sh27", - "depends": ["arules", "data_table", "gbm", "RRF", "xgboost", "xtable"] + "depends": ["RRF", "arules", "data_table", "gbm", "xgboost", "xtable"] }, "inaparc": { "name": "inaparc", @@ -73187,7 +73919,7 @@ "name": "incgraph", "version": "1.0.1", "sha256": "0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml", - "depends": ["BH", "dplyr", "orca", "purrr", "Rcpp", "testthat", "tibble"] + "depends": ["BH", "Rcpp", "dplyr", "orca", "purrr", "testthat", "tibble"] }, "incidence": { "name": "incidence", @@ -73205,13 +73937,13 @@ "name": "incidental", "version": "0.1", "sha256": "012pdwrkzlbnrrkvy67l6nvs1lrjgrzhfh3v4rqzk2ypdvfm3wmx", - "depends": ["dlnm", "ggplot2", "MASS", "matrixStats", "numDeriv"] + "depends": ["MASS", "dlnm", "ggplot2", "matrixStats", "numDeriv"] }, "incidentally": { "name": "incidentally", "version": "1.0.2", "sha256": "063m672ym9w5zmzvdhr17smqy1mffkl3vls7nhpsxc4bjswqls2g", - "depends": ["igraph", "Matrix", "xml2"] + "depends": ["Matrix", "igraph", "xml2"] }, "inctools": { "name": "inctools", @@ -73221,15 +73953,15 @@ }, "incubate": { "name": "incubate", - "version": "1.2.1", - "sha256": "1ip5vbk5d3a4sci09azmbqd1s2cm83l65yaq6fxjswizw3kvmscp", - "depends": ["future", "future_apply", "glue", "MASS", "purrr", "rlang", "survival", "tibble"] + "version": "1.3.0", + "sha256": "1vgmdjk355f33kr8fdpzyvpxyl2qiq53hvdl8l0jbsznn6n75786", + "depends": ["MASS", "future", "future_apply", "glue", "purrr", "rlang", "survival", "tibble"] }, "indelmiss": { "name": "indelmiss", "version": "1.0.10", "sha256": "1dqdk6glzm40y4zxc9bfjg5qsvd2i4xm55w8f7671gyjkzjzavv5", - "depends": ["ape", "numDeriv", "phangorn", "Rcpp"] + "depends": ["Rcpp", "ape", "numDeriv", "phangorn"] }, "independenceWeights": { "name": "independenceWeights", @@ -73253,7 +73985,7 @@ "name": "india", "version": "0.1", "sha256": "1xk617s5njwdl6sz2vgprxbikv71azx9d79rmkvbdiraj740jsz5", - "depends": ["fastmatrix", "L1pack"] + "depends": ["L1pack", "fastmatrix"] }, "indicspecies": { "name": "indicspecies", @@ -73271,19 +74003,19 @@ "name": "indirect", "version": "0.2.1", "sha256": "1iaks18xcxqr2afzbzgxj4jr77p6gw2zmgb1398cgqkgdwb1yj13", - "depends": ["gplots", "MASS"] + "depends": ["MASS", "gplots"] }, "industRial": { "name": "industRial", "version": "0.1.0", "sha256": "0zgnykbr71pi3nii178ijmzd8ijwf3g8y8yz6g3jy4c0by7w676s", - "depends": ["dplyr", "ggplot2", "lattice", "magrittr", "rlang", "SixSigma", "tidyr"] + "depends": ["SixSigma", "dplyr", "ggplot2", "lattice", "magrittr", "rlang", "tidyr"] }, "inegiR": { "name": "inegiR", "version": "3.0.0", "sha256": "1rhkdmpz7mxi7ddyygss5rlh3c8hgxhzdk3fnvnlizc1l55cc6c0", - "depends": ["jsonlite", "lubridate", "plyr", "tibbletime", "XML", "zoo"] + "depends": ["XML", "jsonlite", "lubridate", "plyr", "tibbletime", "zoo"] }, "ineq": { "name": "ineq", @@ -73307,7 +74039,7 @@ "name": "inet", "version": "0.1.0", "sha256": "1kjy2kgi5v29yk6pv776gwdqzkscjh96p3iv1j906vh47zp8wrag", - "depends": ["glmnet", "hdi", "MASS"] + "depends": ["MASS", "glmnet", "hdi"] }, "infer": { "name": "infer", @@ -73317,9 +74049,9 @@ }, "inferCSN": { "name": "inferCSN", - "version": "1.0.3", - "sha256": "1c2aaysyjvxxynwp877bhi9w3lrydg96gp2is6a919dgmwi7ilvx", - "depends": ["ComplexHeatmap", "doParallel", "dplyr", "foreach", "ggnetwork", "ggplot2", "ggraph", "Matrix", "patchwork", "progress", "purrr", "Rcpp", "RcppArmadillo"] + "version": "1.0.5", + "sha256": "01wzimr1gjj4993k15w8kyq1rmc5a2a9q68hv19gdkrwsyd2zspa", + "depends": ["ComplexHeatmap", "Matrix", "Rcpp", "RcppArmadillo", "doParallel", "dplyr", "foreach", "ggnetwork", "ggplot2", "ggraph", "patchwork", "pbapply", "purrr"] }, "inferference": { "name": "inferference", @@ -73331,13 +74063,19 @@ "name": "inferr", "version": "0.3.1", "sha256": "1ma90f31jcd65l5v3wqbx4x61gw3iay1a2hwjsd5aln1ivbgmzsv", - "depends": ["data_table", "magrittr", "Rcpp"] + "depends": ["Rcpp", "data_table", "magrittr"] + }, + "infiltrodiscR": { + "name": "infiltrodiscR", + "version": "0.0.5", + "sha256": "1nlkpvkkky1wjsdycxr3m658krpxr706xfjcy2gqlbsx5nl22v5m", + "depends": ["dplyr", "tidyr"] }, "infinitefactor": { "name": "infinitefactor", "version": "1.0", "sha256": "0j6f9q8z81znwakyx4h0l8ypz0y4yv11d7l3rwljmn4rgspyjl5c", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "reshape2"] }, "infix": { "name": "infix", @@ -73355,7 +74093,7 @@ "name": "influence.ME", "version": "0.9-9", "sha256": "0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v", - "depends": ["lattice", "lme4", "Matrix"] + "depends": ["Matrix", "lattice", "lme4"] }, "influence_SEM": { "name": "influence.SEM", @@ -73367,13 +74105,13 @@ "name": "influenceAUC", "version": "0.1.2", "sha256": "0pscwfxs2y780lzd5sxldnnkzzs2lsjdwz71z44kn7884wqmikpm", - "depends": ["dplyr", "geigen", "ggplot2", "ggrepel", "ROCR"] + "depends": ["ROCR", "dplyr", "geigen", "ggplot2", "ggrepel"] }, "influenceR": { "name": "influenceR", "version": "0.1.5", "sha256": "137m40xs9xfqcm88gi7w86b310rysf3a973wp7x3543n1y1f8r41", - "depends": ["igraph", "Matrix"] + "depends": ["Matrix", "igraph"] }, "influential": { "name": "influential", @@ -73385,7 +74123,7 @@ "name": "influxdbclient", "version": "0.1.2", "sha256": "0zyb6ycyw03kwg8f27vhy14i0bh58j040bjbi9vm1m692hcvcqcd", - "depends": ["bit64", "httr", "jsonlite", "nanotime", "plyr", "R6"] + "depends": ["R6", "bit64", "httr", "jsonlite", "nanotime", "plyr"] }, "influxdbr": { "name": "influxdbr", @@ -73405,6 +74143,12 @@ "sha256": "1ni00y4wni9dgpaj6x2p50bgmzfh2ybr350ywqmnwz5q30r9kjsm", "depends": ["dplyr", "httr", "stringr"] }, + "informativeSCI": { + "name": "informativeSCI", + "version": "1.0.3", + "sha256": "1va0lqhranks4kn1al4fwl00f39aylx361xc369vj3q55qbigny0", + "depends": ["gMCP", "mvtnorm"] + }, "informedSen": { "name": "informedSen", "version": "1.0.7", @@ -73449,9 +74193,15 @@ }, "inlabru": { "name": "inlabru", - "version": "2.10.1", - "sha256": "1sazv0jz458lvdslza1d4y53q6ws9rn2g6sfgv3hin30qk6jzizg", - "depends": ["dplyr", "fmesher", "lifecycle", "magrittr", "Matrix", "MatrixModels", "plyr", "rlang", "sf", "sp", "terra", "tibble", "withr"] + "version": "2.11.1", + "sha256": "07iwi0m8wa1hybl5pjsdkq21zbchm6pimjvpxma72lpdcbmijfxy", + "depends": ["Matrix", "MatrixModels", "dplyr", "fmesher", "lifecycle", "magrittr", "plyr", "rlang", "sf", "sp", "terra", "tibble", "withr"] + }, + "inlamemi": { + "name": "inlamemi", + "version": "1.0.0", + "sha256": "0l18skd43kl99xjyw59pil9rmm60jlkgr7iklghrid280p2984zj", + "depends": ["dplyr", "ggplot2", "rlang", "scales"] }, "inlcolor": { "name": "inlcolor", @@ -73459,12 +74209,6 @@ "sha256": "0yhhy7yrycxg58shfwrja2zfdixss2wldi6qg262dfa9w6j68brj", "depends": ["checkmate", "rlang", "scales"] }, - "inldata": { - "name": "inldata", - "version": "1.2.3", - "sha256": "0155mx8nx5g1vp3mcfar0n4qbxqyvs0fzqnmd8skrrygfk1aw0y5", - "depends": ["checkmate", "sf", "stringi", "terra"] - }, "inline": { "name": "inline", "version": "0.3.19", @@ -73479,15 +74223,15 @@ }, "inlpubs": { "name": "inlpubs", - "version": "1.1.1", - "sha256": "0gg39mkid9s57hd9r5y5pa8228m965diz61s94v38qyix8pjdj37", + "version": "1.1.3", + "sha256": "1l9xngsia76yfq3g550nwgj7s2d33jl0s2k7f89majvkaxldbs47", "depends": ["checkmate", "tm"] }, "innsight": { "name": "innsight", "version": "0.3.0", "sha256": "17di0a7jff4rg944h247kjbd76vai2hsg9gif1q871c7lq04fw4s", - "depends": ["checkmate", "cli", "ggplot2", "R6", "torch"] + "depends": ["R6", "checkmate", "cli", "ggplot2", "torch"] }, "inops": { "name": "inops", @@ -73499,7 +74243,7 @@ "name": "inpdfr", "version": "0.1.12", "sha256": "1pargjl2v1kxxbdzf2jjcw3yxyqmxkq30rz3y5xywigq1ab2lpsw", - "depends": ["cluster", "entropart", "metacom", "R_devices", "RColorBrewer", "SnowballC", "stringi", "tm", "wordcloud"] + "depends": ["RColorBrewer", "R_devices", "SnowballC", "cluster", "entropart", "metacom", "stringi", "tm", "wordcloud"] }, "inplace": { "name": "inplace", @@ -73511,13 +74255,13 @@ "name": "insane", "version": "1.0.3", "sha256": "14j11xmfcj5y39qmzi75payilvz5hcdj77l75pfsi8bhv5z97ykb", - "depends": ["broom", "dplyr", "DT", "ggplot2", "ggpubr", "glue", "patchwork", "purrr", "readxl", "shiny", "tidyr"] + "depends": ["DT", "broom", "dplyr", "ggplot2", "ggpubr", "glue", "patchwork", "purrr", "readxl", "shiny", "tidyr"] }, "insect": { "name": "insect", "version": "1.4.2", "sha256": "0pbac9il1jrhii0hxvvqjc3phyr2iamxwzanxx5mrkyjh2wsl3jh", - "depends": ["ape", "aphid", "kmer", "openssl", "phylogram", "RANN", "seqinr", "xml2"] + "depends": ["RANN", "ape", "aphid", "kmer", "openssl", "phylogram", "seqinr", "xml2"] }, "insectDisease": { "name": "insectDisease", @@ -73525,23 +74269,17 @@ "sha256": "1ncj5fgmx19caf8m2p3ij5iamk941m9y725gs0nqpa9m6zfnzgf8", "depends": ["plyr", "taxize"] }, - "insee": { - "name": "insee", - "version": "1.1.5", - "sha256": "1f6y19dysm0mh3fkrwnqcgi5j1lzy08m3ij3wrx26q2vgwv5lkfg", - "depends": ["crayon", "dplyr", "httr", "openssl", "purrr", "rappdirs", "rlang", "stringr", "tibble", "tidyselect", "xml2"] - }, "insight": { "name": "insight", - "version": "0.20.1", - "sha256": "19lg5dipnwlfxzcpq2mj348f8pnzn6i7sj77hf5ppzha370acgy2", + "version": "0.20.3", + "sha256": "1ckb25cbf6xg425fnkz86hxvmyrdkkl7889bkj73cg6d96c1h3mn", "depends": [] }, "inspectdf": { "name": "inspectdf", "version": "0.0.12", "sha256": "1k9dszjfpvpc10qr9nbw5r55mdwslgblhlrgnqjnwx9i89j03mlk", - "depends": ["dplyr", "ggfittext", "ggplot2", "magrittr", "progress", "Rcpp", "rlang", "tibble", "tidyr"] + "depends": ["Rcpp", "dplyr", "ggfittext", "ggplot2", "magrittr", "progress", "rlang", "tibble", "tidyr"] }, "inspector": { "name": "inspector", @@ -73589,7 +74327,7 @@ "name": "insurancerating", "version": "0.7.4", "sha256": "1bfl5khi70cfqg1kx0fa7ym6nxqhvk1rjff91kvxbc8q2nxj6wda", - "depends": ["ciTools", "classInt", "colorspace", "data_table", "DHARMa", "dplyr", "evtree", "fitdistrplus", "ggplot2", "insight", "lubridate", "mgcv", "patchwork", "scales", "stringr"] + "depends": ["DHARMa", "ciTools", "classInt", "colorspace", "data_table", "dplyr", "evtree", "fitdistrplus", "ggplot2", "insight", "lubridate", "mgcv", "patchwork", "scales", "stringr"] }, "intRegGOF": { "name": "intRegGOF", @@ -73601,7 +74339,7 @@ "name": "intRinsic", "version": "1.0.2", "sha256": "07hs1srvdzrqqqzzxkbrc10sns3i7nlp41b3ysaf1j03jgxwdyid", - "depends": ["dplyr", "FNN", "ggplot2", "knitr", "latex2exp", "Rcpp", "RcppArmadillo", "reshape2", "rlang", "salso"] + "depends": ["FNN", "Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "knitr", "latex2exp", "reshape2", "rlang", "salso"] }, "intRvals": { "name": "intRvals", @@ -73613,7 +74351,7 @@ "name": "intamap", "version": "1.5-7", "sha256": "1rvjqv58bfsya6sc9kbqkln3f9zw3cvqhqsdxfsksvjybnmychxq", - "depends": ["automap", "doParallel", "evd", "foreach", "gstat", "MASS", "MBA", "mvtnorm", "sf", "sp"] + "depends": ["MASS", "MBA", "automap", "doParallel", "evd", "foreach", "gstat", "mvtnorm", "sf", "sp"] }, "intamapInteractive": { "name": "intamapInteractive", @@ -73625,19 +74363,19 @@ "name": "intccr", "version": "3.0.4", "sha256": "1bpzsik6yypkxskp7ar8a1j0wmndsx41xn4kaffz0fni988l23hc", - "depends": ["alabama", "doParallel", "foreach", "MASS", "splines2"] + "depends": ["MASS", "alabama", "doParallel", "foreach", "splines2"] }, "intcensROC": { "name": "intcensROC", "version": "0.1.3", "sha256": "1raqjc3g9fgyd01iax7hrmkk3nzzfi34a1ywhjrkwv1n9gsc58ns", - "depends": ["pracma", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "pracma"] }, "integIRTy": { "name": "integIRTy", "version": "1.0.7", "sha256": "15f04p97fvqdq971adyafm3ljirfxz90lv096fdqn2vk0sq5dwyj", - "depends": ["abind", "doParallel", "foreach", "ltm", "MASS", "mclust"] + "depends": ["MASS", "abind", "doParallel", "foreach", "ltm", "mclust"] }, "integr": { "name": "integr", @@ -73661,7 +74399,7 @@ "name": "intensitynet", "version": "1.4.0", "sha256": "0rgm8rj95r269ww7snwv6czqdxabhzwxyaf3587scprhhn7pncy3", - "depends": ["ggplot2", "igraph", "intergraph", "Matrix", "sna", "spatstat_geom", "spdep", "viridis"] + "depends": ["Matrix", "ggplot2", "igraph", "intergraph", "sna", "spatstat_geom", "spdep", "viridis"] }, "interactionR": { "name": "interactionR", @@ -73683,15 +74421,15 @@ }, "interactions": { "name": "interactions", - "version": "1.1.5", - "sha256": "16lrlj0rc9bkxgmackpvcx8wx9pbsnr55vak6zx022ss820h3ljj", - "depends": ["cli", "crayon", "generics", "ggplot2", "jtools", "rlang", "tibble"] + "version": "1.2.0", + "sha256": "1j4bb3xjdw2xs82nv3l1va2gfk5blzqdz6db1zb31yanhrvv7j9y", + "depends": ["broom", "cli", "generics", "ggplot2", "jtools", "rlang", "tibble"] }, "interca": { "name": "interca", "version": "0.1.2", "sha256": "1ddv1rphdpvxbqbmrj3bgsdpksq84yjxdgygms5pw8jdz8yjyirs", - "depends": ["dplyr", "DT", "factoextra", "FactoMineR", "ggplot2", "ggrepel", "magrittr", "openxlsx", "readr", "readxl", "rmarkdown", "shiny", "shinyFeedback", "shinyWidgets", "waiter"] + "depends": ["DT", "FactoMineR", "dplyr", "factoextra", "ggplot2", "ggrepel", "magrittr", "openxlsx", "readr", "readxl", "rmarkdown", "shiny", "shinyFeedback", "shinyWidgets", "waiter"] }, "interep": { "name": "interep", @@ -73699,11 +74437,17 @@ "sha256": "11g33j14493kr03qviv8nr1x7kj7p61fhm8slmab0nzbfcbwfwih", "depends": ["MASS", "Rcpp", "RcppArmadillo"] }, + "interfacer": { + "name": "interfacer", + "version": "0.2.3", + "sha256": "0ymmm5ij5q8jg1la1k7wfdhb8p8c6kzwf6jqcsa86snz3ssmlrvm", + "depends": ["digest", "dplyr", "forcats", "glue", "knitr", "magrittr", "purrr", "rlang", "roxygen2", "stringr", "tibble", "tidyselect"] + }, "interflex": { "name": "interflex", "version": "1.2.6", "sha256": "0crijwb076b3hprjnji52l8qnd5pp3w7pxy214sfqrg2g3y4gcfl", - "depends": ["AER", "doParallel", "foreach", "future", "ggplot2", "ggplotify", "gridExtra", "gtable", "lfe", "Lmoments", "lmtest", "MASS", "mgcv", "ModelMetrics", "mvtnorm", "pcse", "pROC", "RColorBrewer", "Rcpp", "RcppArmadillo", "sandwich"] + "depends": ["AER", "Lmoments", "MASS", "ModelMetrics", "RColorBrewer", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "future", "ggplot2", "ggplotify", "gridExtra", "gtable", "lfe", "lmtest", "mgcv", "mvtnorm", "pROC", "pcse", "sandwich"] }, "interfr": { "name": "interfr", @@ -73733,7 +74477,7 @@ "name": "interleave", "version": "0.1.2", "sha256": "09ba3sk1s34agihwgf06k7kvwrzh1v2mzxsxzj58k0fa0cfljrzs", - "depends": ["geometries", "Rcpp"] + "depends": ["Rcpp", "geometries"] }, "interlineaR": { "name": "interlineaR", @@ -73745,7 +74489,7 @@ "name": "interp", "version": "1.1-6", "sha256": "0d6ddvm94113d9bjhghjsfbhgz44q0lkjc2l809dzv1lad708x1n", - "depends": ["deldir", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "deldir"] }, "interplex": { "name": "interplex", @@ -73781,7 +74525,7 @@ "name": "interpretCI", "version": "0.1.1", "sha256": "1jg2dpfrhb1kij2z0gq4sw1lrb4v2sky13dpfmdnaz2k5xqnih2s", - "depends": ["aplot", "dplyr", "english", "flextable", "ggbeeswarm", "ggplot2", "moonBook", "officer", "patchwork", "purrr", "RColorBrewer", "rlang", "rmarkdown", "rstudioapi", "scales", "tidyr"] + "depends": ["RColorBrewer", "aplot", "dplyr", "english", "flextable", "ggbeeswarm", "ggplot2", "moonBook", "officer", "patchwork", "purrr", "rlang", "rmarkdown", "rstudioapi", "scales", "tidyr"] }, "interpretR": { "name": "interpretR", @@ -73805,7 +74549,7 @@ "name": "intervalaverage", "version": "0.8.0", "sha256": "07p9r358q3jxm8n7nypxmvpfnh61njivcwaplgzzxrlcbway6fq9", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "intervals": { "name": "intervals", @@ -73823,25 +74567,25 @@ "name": "inti", "version": "0.6.5", "sha256": "1zbfxc34613r460mhln3qn4fsx999vi4qamf5c8pkjdwyd8nvvbz", - "depends": ["agricolae", "dplyr", "DT", "emmeans", "FactoMineR", "ggplot2", "googlesheets4", "lme4", "purrr", "shiny", "stringi", "stringr", "tibble", "tidyr"] + "depends": ["DT", "FactoMineR", "agricolae", "dplyr", "emmeans", "ggplot2", "googlesheets4", "lme4", "purrr", "shiny", "stringi", "stringr", "tibble", "tidyr"] }, "intkrige": { "name": "intkrige", "version": "1.0.1", "sha256": "1p3fn5nzn1iliy025187k590qrsw3z3d47p67gzwwd6h050yrl86", - "depends": ["gstat", "raster", "Rcpp", "RcppArmadillo", "Rdpack", "sp"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "gstat", "raster", "sp"] }, "intmap": { "name": "intmap", "version": "1.0.0", "sha256": "1fxq0jkahangv4pwsvnrr4iq2y6qp61l81b28yzwl74b0lmx6hbf", - "depends": ["BH", "maybe", "R6", "Rcpp"] + "depends": ["BH", "R6", "Rcpp", "maybe"] }, "intmed": { "name": "intmed", "version": "0.1.2", "sha256": "0amcqzinj35yvb9nfy808bz098dqmnds13z335lgqm6sykriyjpl", - "depends": ["doParallel", "dplyr", "foreach", "MASS", "mice", "stringr", "tibble"] + "depends": ["MASS", "doParallel", "dplyr", "foreach", "mice", "stringr", "tibble"] }, "intradayModel": { "name": "intradayModel", @@ -73859,7 +74603,7 @@ "name": "intrinsicFRP", "version": "2.1.0", "sha256": "1ji707s5501m6q8b2bgjd8d6avylb441710dkxaj96sznn8jf4ig", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] }, "intrinsicKappa": { "name": "intrinsicKappa", @@ -73883,7 +74627,7 @@ "name": "intsvy", "version": "2.9", "sha256": "0bk8v9ds6jrp7pvw63k777wj4pvg5nx1df4w5jz1hhr0gsv0jw8v", - "depends": ["dplyr", "foreign", "ggplot2", "Hmisc", "memisc", "plyr", "reshape"] + "depends": ["Hmisc", "dplyr", "foreign", "ggplot2", "memisc", "plyr", "reshape"] }, "inum": { "name": "inum", @@ -73925,7 +74669,7 @@ "name": "invertiforms", "version": "0.1.1", "sha256": "0n3ksfdryk0g6f60acxh4i9f5z6gi9bsbal95z9pcd1vgvyhr1xw", - "depends": ["glue", "Matrix", "sparseLRMatrix"] + "depends": ["Matrix", "glue", "sparseLRMatrix"] }, "investr": { "name": "investr", @@ -74003,7 +74747,7 @@ "name": "iotarelr", "version": "0.1.5", "sha256": "0sp3qcd5zbz8q2srfa5a34gv9rj4hcqiggbrmr67p8zfrfm950np", - "depends": ["ggalluvial", "ggplot2", "gridExtra", "Rcpp", "rlang"] + "depends": ["Rcpp", "ggalluvial", "ggplot2", "gridExtra", "rlang"] }, "iotools": { "name": "iotools", @@ -74039,13 +74783,13 @@ "name": "ipaddress", "version": "1.0.2", "sha256": "0dqxyrc2bbqbsxbzdpn9xw76gnqzjqkrzlrc203v6kd4v81npk7w", - "depends": ["AsioHeaders", "cli", "Rcpp", "rlang", "vctrs"] + "depends": ["AsioHeaders", "Rcpp", "cli", "rlang", "vctrs"] }, "ipanema": { "name": "ipanema", "version": "1.1.0", "sha256": "0fs9mddhzr1pq7mv08602w6rqmx2sjnj0lcp56hawcjfszczdzzn", - "depends": ["base64enc", "DBI", "dplyr", "httr", "jsonlite", "magrittr", "RMySQL"] + "depends": ["DBI", "RMySQL", "base64enc", "dplyr", "httr", "jsonlite", "magrittr"] }, "ipbase": { "name": "ipbase", @@ -74111,7 +74855,7 @@ "name": "ipft", "version": "0.7.2", "sha256": "0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps", - "depends": ["apcluster", "cluster", "dplyr", "ggplot2", "Rcpp"] + "depends": ["Rcpp", "apcluster", "cluster", "dplyr", "ggplot2"] }, "ipkg": { "name": "ipkg", @@ -74135,7 +74879,7 @@ "name": "ipmr", "version": "0.0.7", "sha256": "0zpw73bqv9gblyxaprkhb8f9dva0ivv47bjriyb3265vlzyd088c", - "depends": ["magrittr", "purrr", "Rcpp", "rlang"] + "depends": ["Rcpp", "magrittr", "purrr", "rlang"] }, "ipolygrowth": { "name": "ipolygrowth", @@ -74151,33 +74895,33 @@ }, "ipred": { "name": "ipred", - "version": "0.9-14", - "sha256": "0dcgabbqk7lb8pfqs06ix87caf5c9p6kcppi5sskv76h8z43vj41", - "depends": ["class", "MASS", "nnet", "prodlim", "rpart", "survival"] + "version": "0.9-15", + "sha256": "0jzfq06l2vxyjy46sjgqyk6l4pp06kx3w5j39hzjy9i127hjsxd4", + "depends": ["MASS", "class", "nnet", "prodlim", "rpart", "survival"] }, "iprior": { "name": "iprior", "version": "0.7.4", "sha256": "0zhyr19m6yxhn3gskfm14hmag5vjz1008fhxli2cg14z6hsdl1ww", - "depends": ["doSNOW", "foreach", "ggplot2", "mvtnorm", "Rcpp", "RcppEigen", "reshape2", "scales"] + "depends": ["Rcpp", "RcppEigen", "doSNOW", "foreach", "ggplot2", "mvtnorm", "reshape2", "scales"] }, "ips": { "name": "ips", "version": "0.0.12", "sha256": "0vnsalm94vzagksqv4ph6x7vdwhd1lq278sak30pr4m9bc9xxchw", - "depends": ["ape", "data_table", "phangorn", "plyr", "XML"] + "depends": ["XML", "ape", "data_table", "phangorn", "plyr"] }, "ipsRdbs": { "name": "ipsRdbs", "version": "1.0.0", "sha256": "018l91i88scak8mhz2p1a13dds7kyzig6wb8442hmzkwg63xi764", - "depends": ["extraDistr", "ggplot2", "Rdpack"] + "depends": ["Rdpack", "extraDistr", "ggplot2"] }, "ipsecr": { "name": "ipsecr", "version": "1.4.1", "sha256": "10kliwx8rn4xrcrrmmmr0n2f01dynms5l9lk5xzbyr853x4am5bl", - "depends": ["BH", "MASS", "nlme", "Rcpp", "RcppArmadillo", "secr", "stringr"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "nlme", "secr", "stringr"] }, "ipsfs": { "name": "ipsfs", @@ -74187,15 +74931,15 @@ }, "ipumsr": { "name": "ipumsr", - "version": "0.7.2", - "sha256": "0zkj33xg6b7aapmp8qd333qc6mmcwhbqx3pd8ibhdlcd1pc89hww", - "depends": ["dplyr", "haven", "hipread", "httr", "jsonlite", "lifecycle", "purrr", "R6", "readr", "rlang", "tibble", "tidyselect", "xml2", "zeallot"] + "version": "0.8.1", + "sha256": "0k1mz9i6xsaq8874m2gkdd9ip7x942sx47xndy8smr094jl5zmfr", + "depends": ["R6", "dplyr", "haven", "hipread", "httr", "jsonlite", "lifecycle", "purrr", "readr", "rlang", "tibble", "tidyselect", "xml2", "zeallot"] }, "ipw": { "name": "ipw", "version": "1.2.1", "sha256": "0xgx9l5s4w71494jfs2jfs1dhch18rb8j7jn68hilh1pzc9hz05k", - "depends": ["geepack", "MASS", "nnet", "survival"] + "depends": ["MASS", "geepack", "nnet", "survival"] }, "ipwCoxCSV": { "name": "ipwCoxCSV", @@ -74219,7 +74963,7 @@ "name": "ir", "version": "0.2.1", "sha256": "1ck5247w5lxffd2x3jrslfx13jigik48xmcnkr7my2kzjmnqiyr1", - "depends": ["baseline", "ChemoSpec", "dplyr", "ggplot2", "hyperSpec", "lifecycle", "magrittr", "purrr", "Rdpack", "rlang", "signal", "stringr", "tibble", "tidyr", "units"] + "depends": ["ChemoSpec", "Rdpack", "baseline", "dplyr", "ggplot2", "hyperSpec", "lifecycle", "magrittr", "purrr", "rlang", "signal", "stringr", "tibble", "tidyr", "units"] }, "irace": { "name": "irace", @@ -74231,7 +74975,7 @@ "name": "iraceplot", "version": "1.3", "sha256": "19scipjkxf08wmsv7vwscx3j120444l5ncin9l8fq1i3jq5w6pjy", - "depends": ["cli", "dplyr", "DT", "forcats", "ggforce", "ggplot2", "gridExtra", "irace", "knitr", "labeling", "matrixStats", "plotly", "rlang", "rmarkdown", "tibble", "tidyr", "truncnorm", "viridisLite", "withr"] + "depends": ["DT", "cli", "dplyr", "forcats", "ggforce", "ggplot2", "gridExtra", "irace", "knitr", "labeling", "matrixStats", "plotly", "rlang", "rmarkdown", "tibble", "tidyr", "truncnorm", "viridisLite", "withr"] }, "irboost": { "name": "irboost", @@ -74249,7 +74993,7 @@ "name": "irg", "version": "0.1.6", "sha256": "1c9v5yk1512ga51356fjyl8zblw61p9m55vx89fy81qi0vcwxrgj", - "depends": ["chk", "data_table", "RcppRoll"] + "depends": ["RcppRoll", "chk", "data_table"] }, "irlba": { "name": "irlba", @@ -74297,19 +75041,19 @@ "name": "irtGUI", "version": "0.2", "sha256": "1hyabm9wvld1b1gvcn02yyd8j1wrpfmpxkcj505az64lqj4p7yj0", - "depends": ["irtoys", "magrittr", "mirt", "psych", "readxl", "shiny", "shinycssloaders", "shinydashboard", "WrightMap", "writexl"] + "depends": ["WrightMap", "irtoys", "magrittr", "mirt", "psych", "readxl", "shiny", "shinycssloaders", "shinydashboard", "writexl"] }, "irtQ": { "name": "irtQ", "version": "0.2.0", "sha256": "1728699zrzpazjs7csvlzlcz7mncxspsq3lykd3i0rrpw6cixwsn", - "depends": ["dplyr", "ggplot2", "gridExtra", "janitor", "Matrix", "mirt", "purrr", "reshape2", "Rfast", "rlang", "statmod", "tibble"] + "depends": ["Matrix", "Rfast", "dplyr", "ggplot2", "gridExtra", "janitor", "mirt", "purrr", "reshape2", "rlang", "statmod", "tibble"] }, "irtawsi": { "name": "irtawsi", - "version": "0.3.4", - "sha256": "1fxz0k9pyf1h0mv64lj8p1n5yhgmrzs5q0vq8l77sg3zd8gv66pf", - "depends": ["bs4Dash", "diagram", "DT", "gt", "mirt", "psych", "readxl", "rmarkdown", "shiny", "shinycssloaders", "shinyWidgets"] + "version": "0.4.1", + "sha256": "0il4v2lilj310nviv2va9g6iddh8dk6wpxiwifk4wnmkxbkjmfv0", + "depends": ["DT", "WrightMap", "bs4Dash", "diagram", "gt", "mirt", "mirtCAT", "psych", "readxl", "rmarkdown", "shiny", "shinyWidgets", "shinycssloaders", "writexl"] }, "irtoys": { "name": "irtoys", @@ -74351,7 +75095,7 @@ "name": "iscoCrosswalks", "version": "1.0.0", "sha256": "00pzz0fy0k7zvi5pf389w4g5z96rbc4gzjvhghcmbq71z319wwcn", - "depends": ["data_table", "labourR", "Rdpack"] + "depends": ["Rdpack", "data_table", "labourR"] }, "isdals": { "name": "isdals", @@ -74381,7 +75125,7 @@ "name": "islasso", "version": "1.5.2", "sha256": "100sb5795xk45cm7zb0zmqy3flz0hy32alqqi1wfv10v06dbdlbd", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "ismev": { "name": "ismev", @@ -74403,8 +75147,8 @@ }, "isnullptr": { "name": "isnullptr", - "version": "1.0.1", - "sha256": "0kwjxq59n3qncdw63vsdvz7v5mzbl5lmckdfgiiw35pzmahnxzh9", + "version": "1.0.2", + "sha256": "0p8a290chq01800avvrsljmxvmhhk0hazrd2dry04w7qkxbzyn93", "depends": [] }, "isoSurv": { @@ -74415,9 +75159,9 @@ }, "isoWater": { "name": "isoWater", - "version": "1.1.2", - "sha256": "10rsivlcza28r386a5rs3lv75vb4aancldyswhqql3cxmd12hzqb", - "depends": ["abind", "doParallel", "foreach", "httr", "jsonlite", "R2jags", "R2WinBUGS"] + "version": "1.2.0", + "sha256": "1lmpvcljzsga89ib2avsasfdkgx3658vrp5gik25ymcdyxhsx5mi", + "depends": ["R2WinBUGS", "R2jags", "abind", "doParallel", "foreach", "httr", "jsonlite"] }, "isoband": { "name": "isoband", @@ -74435,7 +75179,7 @@ "name": "isobxr", "version": "2.0.0", "sha256": "1k6zky6v3hjw952jg4l0hnicw11iiqmxh7hcdjcb2nk2f4r4qn4g", - "depends": ["data_table", "deSolve", "dplyr", "fs", "ggplot2", "ggrepel", "gridExtra", "magrittr", "purrr", "qgraph", "R_utils", "readxl", "reshape2", "rlang", "stringr", "tictoc", "tidyr", "writexl"] + "depends": ["R_utils", "data_table", "deSolve", "dplyr", "fs", "ggplot2", "ggrepel", "gridExtra", "magrittr", "purrr", "qgraph", "readxl", "reshape2", "rlang", "stringr", "tictoc", "tidyr", "writexl"] }, "isocalcR": { "name": "isocalcR", @@ -74453,7 +75197,7 @@ "name": "isocir", "version": "2.0-7.1", "sha256": "0jgm0a26frq4fs5d578c44bpn15nshvzmrqfzcbwydf58x7w6sj2", - "depends": ["circular", "combinat", "TSP"] + "depends": ["TSP", "circular", "combinat"] }, "isocountry": { "name": "isocountry", @@ -74465,7 +75209,7 @@ "name": "isodistrreg", "version": "0.1.0", "sha256": "0na7jipwzr16afvz2l6wxh62mv0mrq1ma1qwxnys83zhr0dca099", - "depends": ["Matrix", "osqp", "Rcpp"] + "depends": ["Matrix", "Rcpp", "osqp"] }, "isogeochem": { "name": "isogeochem", @@ -74507,19 +75251,19 @@ "name": "isotonic.pen", "version": "1.0", "sha256": "1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i", - "depends": ["coneproj", "Matrix"] + "depends": ["Matrix", "coneproj"] }, "isotracer": { "name": "isotracer", "version": "1.1.6", "sha256": "0yapaaycakxzq6h3r2zp72zwf514qs64lhygiy3ix0dwxzafnh3b", - "depends": ["BH", "coda", "data_table", "dplyr", "latex2exp", "magrittr", "pillar", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr", "tidyselect"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "coda", "data_table", "dplyr", "latex2exp", "magrittr", "pillar", "purrr", "rlang", "rstan", "rstantools", "tibble", "tidyr", "tidyselect"] }, "isotree": { "name": "isotree", "version": "0.6.1-1", "sha256": "0v0lr1aimlvgm6bpnaz1z4707fnrqvzfc3rziz0vcbzgycs0abvd", - "depends": ["jsonlite", "Rcpp"] + "depends": ["Rcpp", "jsonlite"] }, "ispd": { "name": "ispd", @@ -74543,7 +75287,7 @@ "name": "isva", "version": "1.9", "sha256": "05qx9q0kg4ma23v4abhihw0vz017nq6hv2jzsiqx4d20ngh1dl4z", - "depends": ["fastICA", "JADE", "qvalue"] + "depends": ["JADE", "fastICA", "qvalue"] }, "italy": { "name": "italy", @@ -74567,7 +75311,7 @@ "name": "itdr", "version": "2.0.1", "sha256": "1mjqh25bipzmwvs6aq7846vwvrdis3q0nm9p830w0kbq8l5p2555", - "depends": ["energy", "geigen", "magic", "MASS", "tidyr"] + "depends": ["MASS", "energy", "geigen", "magic", "tidyr"] }, "itemanalysis": { "name": "itemanalysis", @@ -74621,7 +75365,7 @@ "name": "itol.toolkit", "version": "1.1.7", "sha256": "0p29p8qk03aqcmxdskrf2mjms1isffwwxgh1kr38fxi43f3kc9q0", - "depends": ["ape", "colourpicker", "data_table", "dplyr", "ggsci", "miniUI", "purrr", "RColorBrewer", "rstudioapi", "seqinr", "shiny", "stringr", "tidyr", "wesanderson"] + "depends": ["RColorBrewer", "ape", "colourpicker", "data_table", "dplyr", "ggsci", "miniUI", "purrr", "rstudioapi", "seqinr", "shiny", "stringr", "tidyr", "wesanderson"] }, "itp": { "name": "itp", @@ -74651,13 +75395,13 @@ "name": "itscalledsoccer", "version": "0.2.4", "sha256": "1xyfs9y60mrmmrpx5rhm2xg3ysgc75wfb62vb63rr7nlv6sfisgl", - "depends": ["clisymbols", "crayon", "data_table", "dplyr", "glue", "httpcache", "httr", "jsonlite", "magrittr", "R6", "rlang", "stringi", "tidyr"] + "depends": ["R6", "clisymbols", "crayon", "data_table", "dplyr", "glue", "httpcache", "httr", "jsonlite", "magrittr", "rlang", "stringi", "tidyr"] }, "itsdm": { "name": "itsdm", "version": "0.2.1", "sha256": "1rd55arrha2xy5d68nymz3awycpk0797d9q55ia42rq9n1gi9w9k", - "depends": ["checkmate", "dplyr", "fastshap", "ggplot2", "isotree", "mgcv", "ncdf4", "outliertree", "patchwork", "raster", "rlang", "ROCit", "sf", "stars", "stringr", "tidyselect"] + "depends": ["ROCit", "checkmate", "dplyr", "fastshap", "ggplot2", "isotree", "mgcv", "ncdf4", "outliertree", "patchwork", "raster", "rlang", "sf", "stars", "stringr", "tidyselect"] }, "itsmr": { "name": "itsmr", @@ -74693,12 +75437,12 @@ "name": "ivdoctr", "version": "1.0.1", "sha256": "0204blq5yxpwz00vf49k678ccnyih0lbglbxhm1c69hx5p4a62qn", - "depends": ["AER", "coda", "data_table", "MASS", "Rcpp", "RcppArmadillo", "rgl", "sandwich"] + "depends": ["AER", "MASS", "Rcpp", "RcppArmadillo", "coda", "data_table", "rgl", "sandwich"] }, "ivgets": { "name": "ivgets", - "version": "0.1.1", - "sha256": "19bqfasrvdqvs2fvxh7h2l16qkm3rmcsv6m83x726i1i6adqj2bq", + "version": "0.1.2", + "sha256": "1nkwg35h0g15rzdjs0hqa8sqwgj8mjllwscqyjdxrzr35ffys5gn", "depends": ["gets", "ivreg", "stringr"] }, "ivitr": { @@ -74711,7 +75455,7 @@ "name": "ivmodel", "version": "1.9.1", "sha256": "1glm4nwlzyzwbv3nbi23qslnnqf47ps7iyd3wbr1bfdln0sr2s0l", - "depends": ["Formula", "ggplot2", "Matrix", "reshape2"] + "depends": ["Formula", "Matrix", "ggplot2", "reshape2"] }, "ivmte": { "name": "ivmte", @@ -74729,7 +75473,7 @@ "name": "ivreg", "version": "0.6-3", "sha256": "1ccxs6bblknss41605vvvb473s936rvgj7ls7sd9ismxgq83ad5k", - "depends": ["car", "Formula", "lmtest", "MASS"] + "depends": ["Formula", "MASS", "car", "lmtest"] }, "ivs": { "name": "ivs", @@ -74747,7 +75491,7 @@ "name": "ivtools", "version": "2.3.0", "sha256": "1wv0r9dy893hafbbrjcjrphb8dgql71ya4zfbkl5dfp7d4ncfxl0", - "depends": ["ahaz", "data_table", "nleqslv", "numDeriv", "Rcpp", "survival"] + "depends": ["Rcpp", "ahaz", "data_table", "nleqslv", "numDeriv", "survival"] }, "ivx": { "name": "ivx", @@ -74765,7 +75509,7 @@ "name": "ixplorer", "version": "0.2.2", "sha256": "0h0kmcaj783kmnlxnzw0gvf7gg4f6lcyn6l4hz8rz216d98qzxwp", - "depends": ["dplyr", "gert", "gitear", "kableExtra", "keyring", "lubridate", "miniUI", "purrr", "RColorBrewer", "shiny", "shiny_i18n", "shinyWidgets", "stringr"] + "depends": ["RColorBrewer", "dplyr", "gert", "gitear", "kableExtra", "keyring", "lubridate", "miniUI", "purrr", "shiny", "shinyWidgets", "shiny_i18n", "stringr"] }, "izmir": { "name": "izmir", @@ -74777,7 +75521,7 @@ "name": "jSDM", "version": "0.2.6", "sha256": "1rqy6xh6qhvmfgjnjlbkq71dr6c0fdwddvs7cbvv1p5qvf12zhx9", - "depends": ["coda", "corrplot", "doParallel", "foreach", "MASS", "Rcpp", "RcppArmadillo", "RcppGSL", "stringi"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppGSL", "coda", "corrplot", "doParallel", "foreach", "stringi"] }, "jScore": { "name": "jScore", @@ -74789,7 +75533,7 @@ "name": "jaatha", "version": "3.2.5", "sha256": "0npqpb6p4ap64mn5x2y424ayz1gy9s2b1ls4f4bs9l9mhr60z4jy", - "depends": ["assertthat", "R6"] + "depends": ["R6", "assertthat"] }, "jab_adverse_reactions": { "name": "jab.adverse.reactions", @@ -74801,19 +75545,19 @@ "name": "jaccard", "version": "0.1.0", "sha256": "1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936", - "depends": ["dplyr", "magrittr", "qvalue", "Rcpp"] + "depends": ["Rcpp", "dplyr", "magrittr", "qvalue"] }, "jack": { "name": "jack", - "version": "6.0.0", - "sha256": "11clvyv09kfxwwbx1kmxzvc8j6frkx45k8hzcvjigbc8wais7ffi", - "depends": ["BH", "DescTools", "gmp", "multicool", "mvp", "partitions", "qspray", "ratioOfQsprays", "Rcpp", "RcppArmadillo", "RcppCGAL", "spray", "symbolicQspray"] + "version": "6.1.0", + "sha256": "03kfvd43b3skx3x4ky3qxg80m3w1cj2vln018qq7fj7b47ddfiqy", + "depends": ["BH", "DescTools", "RationalMatrix", "Rcpp", "RcppCGAL", "gmp", "multicool", "mvp", "partitions", "qspray", "ratioOfQsprays", "spray", "symbolicQspray", "syt"] }, "jackalope": { "name": "jackalope", "version": "1.1.5", "sha256": "18k130d95k0zd7f88gbh0gnjmc41kyii82phslmrhyigrizhjq82", - "depends": ["ape", "R6", "Rcpp", "RcppArmadillo", "RcppProgress", "Rhtslib", "zlibbioc"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "RcppProgress", "Rhtslib", "ape", "zlibbioc"] }, "jackknifeR": { "name": "jackknifeR", @@ -74831,13 +75575,13 @@ "name": "jackstraw", "version": "1.3.9", "sha256": "0wgqj1n4nvj0jdlm6kzg0r2c93m7ynm49azffd4qhr1wh31rwnba", - "depends": ["cluster", "ClusterR", "corpcor", "irlba", "qvalue", "rsvd"] + "depends": ["ClusterR", "cluster", "corpcor", "irlba", "qvalue", "rsvd"] }, "jacobi": { "name": "jacobi", "version": "3.1.1", "sha256": "1i2v5sgwlbihavrj46g4mkni2b8p6qb7alrnaab30c8lwblsc8g8", - "depends": ["Carlson", "Rcpp", "rgl", "Rvcg"] + "depends": ["Carlson", "Rcpp", "Rvcg", "rgl"] }, "jacpop": { "name": "jacpop", @@ -74871,15 +75615,15 @@ }, "jagshelper": { "name": "jagshelper", - "version": "0.2.3", - "sha256": "1q5y38jzxmvdicjcmck0bmai6xvpi3hzzngrsgdy5bks9mqdgnlj", - "depends": ["jagsUI", "MASS"] + "version": "0.3.1", + "sha256": "105v1clrhr17l78dyi28c21y48sbwbwzjj1irwyrlxinbpxclr2q", + "depends": ["MASS", "jagsUI"] }, "jagstargets": { "name": "jagstargets", "version": "1.2.0", "sha256": "10bx1sy5lcq1k1nliiwqjyq5hrywa97dh5zyyjdxq9rh94xhcc7p", - "depends": ["coda", "fst", "posterior", "purrr", "qs", "R2jags", "rjags", "rlang", "secretbase", "tarchetypes", "targets", "tibble", "tidyselect", "withr"] + "depends": ["R2jags", "coda", "fst", "posterior", "purrr", "qs", "rjags", "rlang", "secretbase", "tarchetypes", "targets", "tibble", "tidyselect", "withr"] }, "jalcal": { "name": "jalcal", @@ -74903,7 +75647,7 @@ "name": "janus", "version": "1.0.0", "sha256": "0dpd24qxwlnrrjyx2gffsmfbsf1schfnq9ck75k9935gmwy2ig04", - "depends": ["dplyr", "forcats", "ggplot2", "hash", "keras", "lubridate", "Metrics", "narray", "purrr", "RcppAlgos", "readr", "reticulate", "Rmpfr", "StatRank", "tensorflow", "tictoc"] + "depends": ["Metrics", "RcppAlgos", "Rmpfr", "StatRank", "dplyr", "forcats", "ggplot2", "hash", "keras", "lubridate", "narray", "purrr", "readr", "reticulate", "tensorflow", "tictoc"] }, "japanstat": { "name": "japanstat", @@ -74915,13 +75659,19 @@ "name": "jarbes", "version": "2.2.1", "sha256": "1gpm7by9wmqgr69876wqd1w3nrzmzsgchh2xlsf37jxz2m5827c0", - "depends": ["bookdown", "GGally", "ggExtra", "ggplot2", "gridExtra", "kableExtra", "MASS", "mcmcplots", "qpdf", "R2jags", "rjags", "tidyr"] + "depends": ["GGally", "MASS", "R2jags", "bookdown", "ggExtra", "ggplot2", "gridExtra", "kableExtra", "mcmcplots", "qpdf", "rjags", "tidyr"] + }, + "jcalendaR": { + "name": "jcalendaR", + "version": "0.1.0", + "sha256": "1b8khcdxz77rd7k87462vwwykr2gi5lv0lzj7nm9famid3q7gh1l", + "depends": [] }, "jcext": { "name": "jcext", "version": "0.1.1", "sha256": "02zppiyq3gy551zi1g00gam1w4y1wgzn5zi9wrcz8yw915dla0ix", - "depends": ["ggplot2", "maps", "RColorBrewer", "rworldmap", "sp", "stringr"] + "depends": ["RColorBrewer", "ggplot2", "maps", "rworldmap", "sp", "stringr"] }, "jcolors": { "name": "jcolors", @@ -74957,7 +75707,7 @@ "name": "jenga", "version": "1.3.0", "sha256": "0yq1nkaakzajjdk3w6hzikl6pwqx0546mcb1ik688b0l55vmwphc", - "depends": ["abind", "dplyr", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "Rfast", "scales", "tictoc"] + "depends": ["Rfast", "abind", "dplyr", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "scales", "tictoc"] }, "jetpack": { "name": "jetpack", @@ -74975,25 +75725,25 @@ "name": "jewel", "version": "2.0.2", "sha256": "100lj4ydw7gx93lmnckxivb65yzjwi0cn5l070ss8532wrm297r3", - "depends": ["igraph", "MASS", "Matrix", "matrixcalc", "purrr", "SMUT"] + "depends": ["MASS", "Matrix", "SMUT", "igraph", "matrixcalc", "purrr"] }, "jfa": { "name": "jfa", "version": "0.7.1", "sha256": "167n554hpmz4iqszlsjzjiphsf857hysfjkd2gx9kwv6r1crmv3k", - "depends": ["bde", "BH", "extraDistr", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "truncdist"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bde", "extraDistr", "ggplot2", "rstan", "rstantools", "truncdist"] }, "jgsbook": { "name": "jgsbook", - "version": "1.0.5", - "sha256": "0d54cdvx97787vwm9pqcmfx66y0l1crz4w16khpqr2k4nqixnkqk", + "version": "1.0.7", + "sha256": "1k0jcfjxn5qf67533br3p6zj464knnakxvr563lvgvqxjv4j8sh2", "depends": ["curl", "httr", "jsonlite", "statip"] }, "jiebaR": { "name": "jiebaR", "version": "0.11", "sha256": "08v64xwr9jp4vh88x7y935khh4cmj8rwsjaxfd2c67n0445qppmd", - "depends": ["jiebaRD", "Rcpp"] + "depends": ["Rcpp", "jiebaRD"] }, "jiebaRD": { "name": "jiebaRD", @@ -75025,29 +75775,35 @@ "sha256": "0l8piz0m9iv9lbw35yx1ww0db0pv0qhbvkz4l36fwjsgnjlh8f6a", "depends": ["lme4", "rpart", "survival"] }, + "jlme": { + "name": "jlme", + "version": "0.1.0", + "sha256": "06fkxb73mv63v4yhgn66dh8dyk45n3mcrqykhy5mgdbnd3a54vjd", + "depends": ["JuliaConnectoR", "JuliaFormulae", "MASS", "generics"] + }, "jlmerclusterperm": { "name": "jlmerclusterperm", - "version": "1.1.3", - "sha256": "1vkc0hk5ln2vwxsf9pn6bpwn8dbk77s8nz6100scqa1y5kgfjhri", - "depends": ["backports", "cli", "generics", "JuliaConnectoR", "lme4"] + "version": "1.1.4", + "sha256": "16k325cpsnvd4j97r8j2i8fwwd5mabizg7dbqnwxq5j8l2qr8b9w", + "depends": ["JuliaConnectoR", "JuliaFormulae", "backports", "cli", "generics", "lme4"] }, "jmBIG": { "name": "jmBIG", "version": "0.1.2", "sha256": "05923dckm91x7al1fglglqfr0iwra73ky2dg0z67qq4f6ikcrlsd", - "depends": ["dplyr", "FastJM", "ggplot2", "JMbayes2", "joineRML", "nlme", "rstanarm", "survival"] + "depends": ["FastJM", "JMbayes2", "dplyr", "ggplot2", "joineRML", "nlme", "rstanarm", "survival"] }, "jmastats": { "name": "jmastats", - "version": "0.2.1", - "sha256": "1k82iwb8sjhha1r4vzrnncvzjjpnl8css6b2mscp26wg593q9hd3", + "version": "0.2.2", + "sha256": "0cwripcb5j3x893j6v095dzzjr64q9ibp1wj0aq4cc8a51p0gjp8", "depends": ["cli", "crayon", "dplyr", "forcats", "ggplot2", "lifecycle", "lubridate", "purrr", "rappdirs", "readr", "rlang", "rvest", "sf", "stringr", "tibble", "tidyr", "tidyselect", "units", "xml2"] }, "jmatrix": { "name": "jmatrix", - "version": "1.5", - "sha256": "1kcz2zvi044aqp9v057x686jbmirc3p2s995vrb0cym1jvw53crh", - "depends": ["memuse", "Rcpp"] + "version": "1.5.2", + "sha256": "1na1jqm9ck6qwlk09f9ab34sf0kamgcay5a7rxclz5skrxzjffci", + "depends": ["Rcpp", "memuse"] }, "jmcm": { "name": "jmcm", @@ -75059,7 +75815,7 @@ "name": "jmdem", "version": "1.0.1", "sha256": "15zrxgd5fgi4wzp4s963pnwj3vkgxs4ygqrcpncy9b6j2cxrivdc", - "depends": ["statmod", "VGAM"] + "depends": ["VGAM", "statmod"] }, "jmetrik": { "name": "jmetrik", @@ -75081,27 +75837,27 @@ }, "jmv": { "name": "jmv", - "version": "2.5.5", - "sha256": "0d98sk8c6m6zi1p8wycdmk5xh48ji04lrhmqpj5q081llv30y31m", - "depends": ["afex", "BayesFactor", "car", "dplyr", "emmeans", "GGally", "ggplot2", "ggrepel", "ggridges", "GPArotation", "jmvcore", "lavaan", "magrittr", "MASS", "multcomp", "mvnormtest", "nnet", "PMCMR", "psych", "R6", "ROCR", "vcd", "vcdExtra"] + "version": "2.5.6", + "sha256": "070bwzq9i3xznx44vlpxw41ja0ry9w08jdnyxf5i58ndshpf1jbz", + "depends": ["BayesFactor", "GGally", "GPArotation", "MASS", "PMCMR", "R6", "ROCR", "afex", "car", "dplyr", "emmeans", "ggplot2", "ggrepel", "ggridges", "jmvcore", "lavaan", "magrittr", "multcomp", "mvnormtest", "nnet", "psych", "vcd", "vcdExtra"] }, "jmvReadWrite": { "name": "jmvReadWrite", - "version": "0.4.6", - "sha256": "02db03vmj377z5nyc7j8myrcxq48wqspnjf1v1sksdz66jxh4f7k", + "version": "0.4.7", + "sha256": "11dynr6gs4jh2q5s1wqvd8vmld0c1yyylmvy5dskndj2xxvcgx48", "depends": ["jsonlite", "zip"] }, "jmvconnect": { "name": "jmvconnect", - "version": "2.3.13", - "sha256": "0b5klfn4986haw3hhy3aarf88g08s1d46b8xrpxxqnwqw8yd7l88", - "depends": ["BH", "evaluate", "httr", "jmvcore", "rappdirs", "Rcpp"] + "version": "2.5.7", + "sha256": "17zyl1cdkain0l1sl8i1ajysmhm60585w4bjrwjjafz2r0rpydxg", + "depends": ["BH", "Rcpp", "evaluate", "httr", "jmvcore", "rappdirs"] }, "jmvcore": { "name": "jmvcore", "version": "2.4.7", "sha256": "1pzcv5rkkhff73cf9kfp56d5frk5vjjj6ls1cd4bskyrm0754p3a", - "depends": ["base64enc", "jsonlite", "R6", "rlang", "stringi"] + "depends": ["R6", "base64enc", "jsonlite", "rlang", "stringi"] }, "job": { "name": "job", @@ -75113,25 +75869,25 @@ "name": "jocre", "version": "0.3.3", "sha256": "1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6", - "depends": ["boot", "KernSmooth", "plyr", "TSP"] + "depends": ["KernSmooth", "TSP", "boot", "plyr"] }, "joinXL": { "name": "joinXL", "version": "1.0.1", "sha256": "1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i", - "depends": ["data_table", "openxlsx", "R_utils", "rChoiceDialogs", "Rcpp", "readxl", "rJava", "timeDate", "timeSeries"] + "depends": ["R_utils", "Rcpp", "data_table", "openxlsx", "rChoiceDialogs", "rJava", "readxl", "timeDate", "timeSeries"] }, "joineR": { "name": "joineR", "version": "1.2.8", "sha256": "0hf83115g5m0m1wv9yji2wvyzb5j4wrzbzkspdcswk9i4hkmp4h7", - "depends": ["lattice", "MASS", "nlme", "statmod", "survival"] + "depends": ["MASS", "lattice", "nlme", "statmod", "survival"] }, "joineRML": { "name": "joineRML", "version": "0.4.6", "sha256": "07drhpyvsmmsbv4knx4ma91f773f48jf14lnpn8cdl5sslc6f4pp", - "depends": ["cobs", "doParallel", "foreach", "generics", "ggplot2", "lme4", "MASS", "Matrix", "mvtnorm", "nlme", "randtoolbox", "Rcpp", "RcppArmadillo", "survival", "tibble"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "cobs", "doParallel", "foreach", "generics", "ggplot2", "lme4", "mvtnorm", "nlme", "randtoolbox", "survival", "tibble"] }, "joinet": { "name": "joinet", @@ -75149,7 +75905,7 @@ "name": "jointCalib", "version": "0.1.0", "sha256": "0md4rmb7f3k6zy1y8s43p14wwrx2bv3j5j03sn7qh9mhpyssl8hn", - "depends": ["ebal", "laeken", "MASS", "mathjaxr", "sampling", "survey"] + "depends": ["MASS", "ebal", "laeken", "mathjaxr", "sampling", "survey"] }, "jointDiag": { "name": "jointDiag", @@ -75185,19 +75941,19 @@ "name": "jointseg", "version": "1.0.2", "sha256": "0zilkxk30w3l9mwikmsgvpy5misjggs98c3bjrjy1pfc4b0is943", - "depends": ["acnr", "DNAcopy", "matrixStats"] + "depends": ["DNAcopy", "acnr", "matrixStats"] }, "jomo": { "name": "jomo", "version": "2.7-6", "sha256": "1np2sw0kq21kdhkv227pz2rqvpxg06r3mk93ggkrz5nl45ajmyiz", - "depends": ["lme4", "MASS", "ordinal", "survival", "tibble"] + "depends": ["MASS", "lme4", "ordinal", "survival", "tibble"] }, "jordan": { "name": "jordan", - "version": "1.0-5", - "sha256": "10va924f3fjasmqahlrk0k7fmnyjfqmkcgimqpvhfk0vwgr8pv3a", - "depends": ["emulator", "mathjaxr", "Matrix", "onion"] + "version": "1.0-6", + "sha256": "1c5s12s3qbffk5rlmigmy5hhqd6ln43z5scn5vl4cc05ix64zh15", + "depends": ["Matrix", "onion", "quadform"] }, "josaplay": { "name": "josaplay", @@ -75225,8 +75981,8 @@ }, "joyn": { "name": "joyn", - "version": "0.2.0", - "sha256": "0p8s90fkjwlllhk7a60xs6pfvgbhyz5sk3rdvdp5sb4l037rb4m2", + "version": "0.2.2", + "sha256": "1pcg70znihl310aibhd2k8w8nc5960wj7g418f2xb1rx9yxvwn8g", "depends": ["cli", "collapse", "data_table", "lifecycle", "rlang"] }, "jpcity": { @@ -75267,8 +76023,8 @@ }, "jqr": { "name": "jqr", - "version": "1.3.3", - "sha256": "1w6806yx763xb0xaqh8ms20gz4h1y3c2s11lgsq3x8h6bahimn5s", + "version": "1.3.4", + "sha256": "1h7rbqjgc1hilqyzlzfsd3603hfj26cprg7cjmxw08bi6p0w4hwc", "depends": ["lazyeval", "magrittr"] }, "jquerylib": { @@ -75281,13 +76037,13 @@ "name": "jrSiCKLSNMF", "version": "1.2.1", "sha256": "1ai3maxl1gmgr9bvc813xnfz5lk9kgzm6a46p8iidjpnv5p42c4v", - "depends": ["cluster", "clValid", "data_table", "factoextra", "foreach", "ggplot2", "igraph", "irlba", "kknn", "MASS", "Matrix", "pbapply", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "rlang", "scran", "umap"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "clValid", "cluster", "data_table", "factoextra", "foreach", "ggplot2", "igraph", "irlba", "kknn", "pbapply", "rlang", "scran", "umap"] }, "jrc": { "name": "jrc", "version": "0.6.0", "sha256": "0zqif6csh4r5vbcw1dl12x2psb27r5lv0k5z0vv8bk3xk5r6vwlq", - "depends": ["httpuv", "jsonlite", "mime", "R_utils", "R6", "stringi", "stringr"] + "depends": ["R6", "R_utils", "httpuv", "jsonlite", "mime", "stringi", "stringr"] }, "jrich": { "name": "jrich", @@ -75323,7 +76079,7 @@ "name": "jsTreeR", "version": "2.6.0", "sha256": "1wck0wnj41qs3cjjmp4b8bnjy7l736k5xqq89al40am0ixnf86bs", - "depends": ["base64enc", "fontawesome", "htmltools", "htmlwidgets", "jquerylib", "miniUI", "R_utils", "rstudioapi", "shiny", "shinyAce"] + "depends": ["R_utils", "base64enc", "fontawesome", "htmltools", "htmlwidgets", "jquerylib", "miniUI", "rstudioapi", "shiny", "shinyAce"] }, "jshintr": { "name": "jshintr", @@ -75333,15 +76089,15 @@ }, "jskm": { "name": "jskm", - "version": "0.5.3", - "sha256": "078aij3n53q1pj5wb32bvmzncw9hhwxxp3s0lg8iqgpcyb4cgbj0", + "version": "0.5.5", + "sha256": "16a1v5vs9hdsyp5x0r237lc4vh7mdvylplb6ad2c9q09xdglrgs6", "depends": ["ggplot2", "ggpubr", "patchwork", "scales", "survey", "survival"] }, "jsmodule": { "name": "jsmodule", - "version": "1.5.5", - "sha256": "1av1c6wza8rrd7klkzhy5y7ncp3xc07bmvm32vskm7nkfglcky4k", - "depends": ["data_table", "DT", "epiDisplay", "flextable", "forestploter", "geepack", "GGally", "ggplot2", "ggpubr", "haven", "Hmisc", "jskm", "jstable", "labelled", "MatchIt", "maxstat", "officer", "pROC", "purrr", "RColorBrewer", "readr", "readxl", "rstudioapi", "rvg", "scales", "see", "shiny", "shinycustomloader", "shinyjs", "shinyWidgets", "survey", "survIDINRI", "survival", "timeROC"] + "version": "1.5.6", + "sha256": "1yyyrl6pgi4hzjcr20p2930iivi1mzyafw6cihny0lr81yv0kyh7", + "depends": ["DT", "GGally", "Hmisc", "MatchIt", "RColorBrewer", "data_table", "epiDisplay", "flextable", "forestploter", "geepack", "ggplot2", "ggpubr", "haven", "jskm", "jstable", "labelled", "maxstat", "officer", "pROC", "purrr", "readr", "readxl", "rstudioapi", "rvg", "scales", "see", "shiny", "shinyWidgets", "shinycustomloader", "shinyjs", "survIDINRI", "survey", "survival", "timeROC"] }, "json2aRgs": { "name": "json2aRgs", @@ -75359,7 +76115,7 @@ "name": "jsonNormalize", "version": "1.0.0", "sha256": "1szvi8c0r75jv7y2y1jsampb783svvx04x4rvyw8v9qkiw0qpfis", - "depends": ["rstudioapi", "V8"] + "depends": ["V8", "rstudioapi"] }, "jsonStrings": { "name": "jsonStrings", @@ -75371,13 +76127,13 @@ "name": "jsonify", "version": "1.2.2", "sha256": "0bxgyj5b1hnijq5315g050giixy4k5mjz2zdx8yil0igb5ifji9p", - "depends": ["rapidjsonr", "Rcpp"] + "depends": ["Rcpp", "rapidjsonr"] }, "jsonld": { "name": "jsonld", "version": "2.2", "sha256": "0bplz2s97wl9yp383jazykh5647iw6kbr1zanqai2s0sxp1xbwn8", - "depends": ["curl", "jsonlite", "V8"] + "depends": ["V8", "curl", "jsonlite"] }, "jsonlite": { "name": "jsonlite", @@ -75399,15 +76155,15 @@ }, "jstable": { "name": "jstable", - "version": "1.2.6", - "sha256": "1g8qfbm8fxjm48dwmwfgckdsynicbmpnj35yjy34nal98qs5andp", + "version": "1.3.0", + "sha256": "0gz2cx1qlgq2ghmlk452clhvzqf18ir3bfc81mfg1jb24l7n2129", "depends": ["coxme", "data_table", "dplyr", "geepack", "labelled", "lme4", "magrittr", "purrr", "survey", "survival", "tableone", "tibble"] }, "jstager": { "name": "jstager", - "version": "0.0.2", - "sha256": "14n4j8imka9rrnxidvsh3rax4qqbg2ccnj6pwcwgqyw897fimjkv", - "depends": ["dplyr", "httr", "openxlsx", "rvest", "tibble", "xml2"] + "version": "0.0.5", + "sha256": "0x6pwpzyls8267f0n62bm9s350wr6770vzh46cz382sri8hx8013", + "depends": ["chromote", "dplyr", "httr", "openxlsx", "rvest", "tibble", "xml2"] }, "jstor": { "name": "jstor", @@ -75425,7 +76181,7 @@ "name": "jti", "version": "0.8.4", "sha256": "0jxqv3xa9yyzizx1rhxjv65c8b253shridy57skrd5kya701n460", - "depends": ["igraph", "Rcpp", "RcppArmadillo", "sparta"] + "depends": ["Rcpp", "RcppArmadillo", "igraph", "sparta"] }, "jtools": { "name": "jtools", @@ -75461,7 +76217,7 @@ "name": "junctions", "version": "2.1.0", "sha256": "1jv8vn826ii1mvpcikg5bhm2arjgr180y0rqy0qkmn4bsm3cbnqx", - "depends": ["nloptr", "Rcpp", "RcppParallel", "tibble"] + "depends": ["Rcpp", "RcppParallel", "nloptr", "tibble"] }, "just_install": { "name": "just.install", @@ -75473,7 +76229,7 @@ "name": "justifier", "version": "0.2.6", "sha256": "0zpmxcgaa0y5qpk82m4jmkljvfrsv8fm8dmzxhvblicyl28d33bs", - "depends": ["data_tree", "DiagrammeR", "DiagrammeRsvg", "purrr", "yaml", "yum"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "data_tree", "purrr", "yaml", "yum"] }, "jvcoords": { "name": "jvcoords", @@ -75497,7 +76253,7 @@ "name": "kDGLM", "version": "1.2.0", "sha256": "10is3f3gcax317gxkbvsv35385q9cjmxb14dfxxmq7y7aw4p6iqb", - "depends": ["extraDistr", "generics", "Rdpack", "Rfast"] + "depends": ["Rdpack", "Rfast", "extraDistr", "generics"] }, "kNNvs": { "name": "kNNvs", @@ -75533,12 +76289,12 @@ "name": "kaigiroku", "version": "0.5", "sha256": "11f9lxk4kx3d65i2xnbpw1ixcc9qgahqdirl42aiyph4hzah1fhh", - "depends": ["dplyr", "jsonlite", "R_utils", "tidyr"] + "depends": ["R_utils", "dplyr", "jsonlite", "tidyr"] }, "kairos": { "name": "kairos", - "version": "2.1.0", - "sha256": "1n59sicqffj7gn3l2726w0dnfxx4j8h16jkjv5lp4h3acpdnx6c9", + "version": "2.1.1", + "sha256": "07vlw4vyrkx1j12z8ik7fl9xqy3zmvx6nhcv8vwmzjbzhr3bv2j6", "depends": ["aion", "arkhe", "dimensio", "extraDistr"] }, "kalmanfilter": { @@ -75551,25 +76307,25 @@ "name": "kamila", "version": "0.1.2", "sha256": "01rwalv2qigxl3j3jyhrdbxlarwf0xdc8xa6c42sgcl6qpna5vn7", - "depends": ["abind", "gtools", "KernSmooth", "plyr", "Rcpp"] + "depends": ["KernSmooth", "Rcpp", "abind", "gtools", "plyr"] }, "kangar00": { "name": "kangar00", "version": "1.4.2", "sha256": "14i4i7m5y02hybllkawwxlc4g0j4lr1pybqip6zpqd612j5q4mfm", - "depends": ["bigmemory", "CompQuadForm", "data_table", "igraph", "lattice", "sqldf"] + "depends": ["CompQuadForm", "bigmemory", "data_table", "igraph", "lattice", "sqldf"] }, "kanjistat": { "name": "kanjistat", "version": "0.14.1", "sha256": "1d6r923xczhr75dmb3vq2pr3l9maigk8zvvk4r5x0jlh8sgrwdr0", - "depends": ["crayon", "dendextend", "gsubfn", "lifecycle", "Matrix", "png", "purrr", "RANN", "Rcpp", "rlang", "ROI", "showtext", "stringi", "stringr", "sysfonts", "transport", "xml2"] + "depends": ["Matrix", "RANN", "ROI", "Rcpp", "crayon", "dendextend", "gsubfn", "lifecycle", "png", "purrr", "rlang", "showtext", "stringi", "stringr", "sysfonts", "transport", "xml2"] }, "kantorovich": { "name": "kantorovich", "version": "3.2.0", "sha256": "1fvf2j518h6mfjrkh7c9swpi8adfd6a5pr7b6pc6al16jbvbw3rf", - "depends": ["CVXR", "gmp", "lpSolve", "ompr", "ompr_roi", "rcdd", "Rglpk", "ROI_plugin_glpk", "slam"] + "depends": ["CVXR", "ROI_plugin_glpk", "Rglpk", "gmp", "lpSolve", "ompr", "ompr_roi", "rcdd", "slam"] }, "kaos": { "name": "kaos", @@ -75617,7 +76373,7 @@ "name": "karyotapR", "version": "1.0.1", "sha256": "01mxsv4ky6d16xjkvi6lc2cfvrdll6whyizxf500m8ds9bdlmqha", - "depends": ["circlize", "cli", "ComplexHeatmap", "dbscan", "dplyr", "fitdistrplus", "GenomicRanges", "ggplot2", "gtools", "IRanges", "magrittr", "purrr", "rhdf5", "rlang", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "tibble", "tidyr", "umap", "viridisLite"] + "depends": ["ComplexHeatmap", "GenomicRanges", "IRanges", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "circlize", "cli", "dbscan", "dplyr", "fitdistrplus", "ggplot2", "gtools", "magrittr", "purrr", "rhdf5", "rlang", "tibble", "tidyr", "umap", "viridisLite"] }, "katex": { "name": "katex", @@ -75627,8 +76383,8 @@ }, "kayadata": { "name": "kayadata", - "version": "1.3.0", - "sha256": "1fq8yaiis38avmnklq2g17sz1aphplraqgw40q5zfs1kdvhr39gp", + "version": "1.4.0", + "sha256": "14fn7ryrssj2c83w23hqm8ai8d5f4lf5raqyvj4qij514jfxrhzq", "depends": ["dplyr", "forcats", "ggplot2", "magrittr", "purrr", "scales", "stringr", "tidyr"] }, "kazaam": { @@ -75647,31 +76403,31 @@ "name": "kcpRS", "version": "1.1.1", "sha256": "0drqw521bi2fnlapjd7hhir6vcy2aqz8jj35qdygnjkj1p3701c7", - "depends": ["doParallel", "foreach", "RColorBrewer", "Rcpp", "roll"] + "depends": ["RColorBrewer", "Rcpp", "doParallel", "foreach", "roll"] }, "kde1d": { "name": "kde1d", "version": "1.0.7", "sha256": "1z6g54qhiry04hx39akz1ll78rw49w7gwkcbjagxyrfq8gswa2yn", - "depends": ["BH", "randtoolbox", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "randtoolbox"] }, "kdecopula": { "name": "kdecopula", "version": "0.9.2", "sha256": "0g5c12wm3byd4chd8i9mxv599gsf4ip4qghx83j3mmhsmn05zf4y", - "depends": ["lattice", "locfit", "qrng", "quadprog", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "lattice", "locfit", "qrng", "quadprog"] }, "kdensity": { "name": "kdensity", "version": "1.1.0", "sha256": "07d1p3ysdm66a9sf0gih5xjb3wfab44c3sr8aaraz22s2a9q9b55", - "depends": ["assertthat", "EQL", "univariateML"] + "depends": ["EQL", "assertthat", "univariateML"] }, "kdevine": { "name": "kdevine", "version": "0.4.5", "sha256": "0d157kl8x9jq4h8h0r8iia25wwdw1syc4f1iqp5mgn3l4kgark9s", - "depends": ["cctools", "doParallel", "foreach", "kdecopula", "KernSmooth", "MASS", "qrng", "Rcpp", "VineCopula"] + "depends": ["KernSmooth", "MASS", "Rcpp", "VineCopula", "cctools", "doParallel", "foreach", "kdecopula", "qrng"] }, "kdist": { "name": "kdist", @@ -75689,7 +76445,7 @@ "name": "kdry", "version": "0.0.2", "sha256": "0svmm8ycl3gk0z9w2rps4hdqyrc6k3nl024fbmq3dwa3vlv56rs0", - "depends": ["data_table", "doParallel", "foreach", "Hmisc", "magrittr"] + "depends": ["Hmisc", "data_table", "doParallel", "foreach", "magrittr"] }, "kedd": { "name": "kedd", @@ -75749,25 +76505,25 @@ "name": "keras", "version": "2.15.0", "sha256": "0xahkgww3dzp8vjz0456sn6ihz0w0q0dz1gnmx07r2vx81isirvc", - "depends": ["generics", "glue", "magrittr", "R6", "reticulate", "rlang", "tensorflow", "tfruns", "zeallot"] + "depends": ["R6", "generics", "glue", "magrittr", "reticulate", "rlang", "tensorflow", "tfruns", "zeallot"] }, "keras3": { "name": "keras3", - "version": "1.0.0", - "sha256": "173l57wgnbjwmb8cgsmifk22dwiib50mkx0k68v080iavh4x44g6", + "version": "1.1.0", + "sha256": "0dssv7n34lc934z16kpcjiyf30qgnmn5sqyyhbqxbxs23g2mvmjl", "depends": ["cli", "fastmap", "generics", "glue", "magrittr", "reticulate", "rlang", "tensorflow", "tfruns", "zeallot"] }, "kerastuneR": { "name": "kerastuneR", "version": "0.1.0.7", "sha256": "05hyhgbc2533az1yrjj8v8idky0xwn20mxd92dna0is6pddf75hv", - "depends": ["crayon", "data_table", "dplyr", "echarts4r", "magick", "plotly", "reticulate", "rjson", "RJSONIO", "rstudioapi", "tensorflow", "tidyjson"] + "depends": ["RJSONIO", "crayon", "data_table", "dplyr", "echarts4r", "magick", "plotly", "reticulate", "rjson", "rstudioapi", "tensorflow", "tidyjson"] }, "kergp": { "name": "kergp", "version": "0.5.7", "sha256": "0cf6acz09cbzhnl26x2z0s674mvikl9lq31mdl2s10y6ah00cpsk", - "depends": ["doFuture", "doParallel", "lattice", "MASS", "nloptr", "numDeriv", "Rcpp", "testthat"] + "depends": ["MASS", "Rcpp", "doFuture", "doParallel", "lattice", "nloptr", "numDeriv", "testthat"] }, "kerndwd": { "name": "kerndwd", @@ -75785,31 +76541,31 @@ "name": "kernelboot", "version": "0.1.10", "sha256": "1fv00hbm4l5dxcw8hq2wlfxng49bc8k608ny70g3fy0grkh7r8vy", - "depends": ["future", "future_apply", "parallelly", "Rcpp"] + "depends": ["Rcpp", "future", "future_apply", "parallelly"] }, "kernelshap": { "name": "kernelshap", - "version": "0.5.0", - "sha256": "0wxv9b0h5kzikxglmhcirjpa0dv488ibdxd7n1x5ii6wz2bpzn7i", - "depends": ["foreach"] + "version": "0.7.0", + "sha256": "0p0zi0l3b7axcp3r34arwbpbbj8bibgryza7g5f45ngm77nlbc5f", + "depends": ["MASS", "foreach"] }, "kernhaz": { "name": "kernhaz", "version": "0.1.0", "sha256": "1cxwjnfyhxfjdbhs21airycs704jic21pdpsbxsx37wkl11cxpai", - "depends": ["doParallel", "foreach", "GA", "rgl"] + "depends": ["GA", "doParallel", "foreach", "rgl"] }, "kernlab": { "name": "kernlab", - "version": "0.9-32", - "sha256": "1p3gbn9qgc6yqx9irkl8c23khvkx77jl96hk9hn4vsrx6i7g6kk5", + "version": "0.9-33", + "sha256": "0q9hvnams1cjjrx7hny0sjszqqg837pgn642nsdwhqipdmypih3h", "depends": [] }, "kernplus": { "name": "kernplus", "version": "0.1.2", "sha256": "0z5zpj89nw7cdphg6frmjwqjxsl6g95xsa8zgsxmw2q75wwj1saz", - "depends": ["circular", "KernSmooth", "mixtools"] + "depends": ["KernSmooth", "circular", "mixtools"] }, "kernscr": { "name": "kernscr", @@ -75821,13 +76577,13 @@ "name": "kesernetwork", "version": "0.1.0", "sha256": "0q42zry3qgg38aas0cxy7lwpj9mj45crcbs353d1d1is0w1avh09", - "depends": ["config", "data_table", "dplyr", "DT", "ggplot2", "golem", "htmltools", "plotly", "reactable", "rintrojs", "rlang", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyhelper", "shinyWidgets", "stringr", "visNetwork", "yaml"] + "depends": ["DT", "config", "data_table", "dplyr", "ggplot2", "golem", "htmltools", "plotly", "reactable", "rintrojs", "rlang", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyhelper", "stringr", "visNetwork", "yaml"] }, "keyATM": { "name": "keyATM", "version": "0.5.2", "sha256": "1xd5ps0m6ymbdia89n2lr03pjhxhwsjwd648xpq42wkvir8an1nv", - "depends": ["cli", "dplyr", "fastmap", "fs", "future_apply", "ggplot2", "ggrepel", "magrittr", "MASS", "Matrix", "matrixNormal", "pgdraw", "purrr", "quanteda", "Rcpp", "RcppEigen", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "cli", "dplyr", "fastmap", "fs", "future_apply", "ggplot2", "ggrepel", "magrittr", "matrixNormal", "pgdraw", "purrr", "quanteda", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "keyToEnglish": { "name": "keyToEnglish", @@ -75863,7 +76619,7 @@ "name": "keyring", "version": "1.3.2", "sha256": "0mps6q7yayx5l78vlq567pndlsjk71izd65znz3lj4dfbh0qq046", - "depends": ["askpass", "assertthat", "filelock", "openssl", "R6", "rappdirs", "sodium", "yaml"] + "depends": ["R6", "askpass", "assertthat", "filelock", "openssl", "rappdirs", "sodium", "yaml"] }, "keyringr": { "name": "keyringr", @@ -75881,13 +76637,13 @@ "name": "kfa", "version": "0.2.2", "sha256": "0niw8b8f56cb8ppfl40mh925a5yrhg89aiac7qynh0ni42ywlw5g", - "depends": ["caret", "doParallel", "flextable", "foreach", "GPArotation", "knitr", "lavaan", "officer", "rmarkdown", "semTools", "simstandard"] + "depends": ["GPArotation", "caret", "doParallel", "flextable", "foreach", "knitr", "lavaan", "officer", "rmarkdown", "semTools", "simstandard"] }, "kfda": { "name": "kfda", "version": "1.0.0", "sha256": "0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi", - "depends": ["kernlab", "MASS"] + "depends": ["MASS", "kernlab"] }, "kfigr": { "name": "kfigr", @@ -75933,21 +76689,21 @@ }, "khisr": { "name": "khisr", - "version": "1.0.4", - "sha256": "00myg7anp5c85bnxamwp59q0f2rgj9fqmsnzcj3ijbrqs1fdz1s3", + "version": "1.0.5", + "sha256": "00l4iabxysj1g3fwxvnbi96gafyw6szj4s95kd845rk19198pyjx", "depends": ["cli", "curl", "dplyr", "httr2", "janitor", "jsonlite", "lifecycle", "lubridate", "magrittr", "purrr", "rlang", "stringr", "tidyr", "withr"] }, "khroma": { "name": "khroma", - "version": "1.12.0", - "sha256": "1w3rd98m3qk21p8zh3b13x9jbms5zd51il917qxdnxcyc4166n5s", + "version": "1.13.0", + "sha256": "0h84ds9cihd0kacrziq1j562wqcdx06ib6m7a4b786c3ck696l69", "depends": [] }, "kibior": { "name": "kibior", "version": "0.1.1", "sha256": "1acrdlqbklhhd69i1gija8r3nsdgcnfvk5ngz7b2ndy2f58w5ynf", - "depends": ["Biostrings", "data_table", "dplyr", "elastic", "jsonlite", "magrittr", "purrr", "R6", "rio", "Rsamtools", "rtracklayer", "stringr", "tibble", "tidyr"] + "depends": ["Biostrings", "R6", "Rsamtools", "data_table", "dplyr", "elastic", "jsonlite", "magrittr", "purrr", "rio", "rtracklayer", "stringr", "tibble", "tidyr"] }, "kidney_epi": { "name": "kidney.epi", @@ -75959,7 +76715,7 @@ "name": "kidsides", "version": "0.5.0", "sha256": "0iw6mr5yqgj4sn3bvirzcdzzxdxpkyr2ci4flzyjb60p0gfwlr7b", - "depends": ["DBI", "R_utils", "RSQLite"] + "depends": ["DBI", "RSQLite", "R_utils"] }, "kim": { "name": "kim", @@ -75989,7 +76745,7 @@ "name": "kindisperse", "version": "0.10.2", "sha256": "0f2i2j1mwk6bwsc42xkkf18nyffp1983bbarwvscjj7saibhfpyj", - "depends": ["dplyr", "fitdistrplus", "ggplot2", "ggrepel", "here", "LaplacesDemon", "magrittr", "plotly", "readr", "rlang", "shiny", "shinythemes", "stringr", "tibble", "tidyselect"] + "depends": ["LaplacesDemon", "dplyr", "fitdistrplus", "ggplot2", "ggrepel", "here", "magrittr", "plotly", "readr", "rlang", "shiny", "shinythemes", "stringr", "tibble", "tidyselect"] }, "kinematics": { "name": "kinematics", @@ -76001,7 +76757,7 @@ "name": "kinship2", "version": "1.9.6.1", "sha256": "0bggc78b3xyz6vczbbqhibn6zxgsw122nzymsndk5nd19yb76nv9", - "depends": ["knitr", "Matrix", "quadprog"] + "depends": ["Matrix", "knitr", "quadprog"] }, "kirby21_base": { "name": "kirby21.base", @@ -76029,9 +76785,9 @@ }, "kissmig": { "name": "kissmig", - "version": "1.0-4", - "sha256": "0qm9psbi42xv69y2095j6nk51w15x6gl71qjhmfk9jq0r9llfbax", - "depends": ["raster", "Rcpp"] + "version": "1.0-5", + "sha256": "0q2kn394kzziywb1a0h1s0845q8b83fqv4s5qk1vx03kppd93smv", + "depends": ["Rcpp", "raster"] }, "kit": { "name": "kit", @@ -76055,24 +76811,24 @@ "name": "kknn", "version": "1.3.1", "sha256": "1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112", - "depends": ["igraph", "Matrix"] + "depends": ["Matrix", "igraph"] }, "kko": { "name": "kko", "version": "1.0.1", "sha256": "08mgi7j1kirfnjsj3xi2wgr32cnqb88vxs15gfm6f1gq853xvhch", - "depends": ["doParallel", "ExtDist", "foreach", "grpreg", "knockoff"] + "depends": ["ExtDist", "doParallel", "foreach", "grpreg", "knockoff"] }, "klaR": { "name": "klaR", "version": "1.7-3", "sha256": "1rg3p3y984s7k7y14agbh3kxh21rrvan3yzpvfimpnvw04f08v6k", - "depends": ["combinat", "MASS", "questionr"] + "depends": ["MASS", "combinat", "questionr"] }, "klassR": { "name": "klassR", - "version": "0.2.3", - "sha256": "0qq290c2n8diy3sgldw64bvsqsddfqpkb2cmqgdn9m6a0m3cg6s0", + "version": "0.2.4", + "sha256": "1n0nwg5r6cqksps621ff40dy447mbaqvd3zfjlhnlkywjx7iay60", "depends": ["httr", "jsonlite", "tm"] }, "klausuR": { @@ -76103,19 +76859,19 @@ "name": "klic", "version": "1.0.4", "sha256": "1ggsdq8xcg6hi12rq356myhngx3j475gpwlvpynm1581r4z0lkbk", - "depends": ["cluster", "coca", "Matrix", "pheatmap", "RColorBrewer"] + "depends": ["Matrix", "RColorBrewer", "cluster", "coca", "pheatmap"] }, "klovan": { "name": "klovan", "version": "0.1.0", "sha256": "0fd1p6dhvaa00h8ij3bj1brqbc21yqni3bfg265yqf7paqbmxnkv", - "depends": ["dplyr", "fields", "GGally", "ggforce", "ggplot2", "ggrepel", "gstat", "magrittr", "MASS", "metR", "pracma", "sp", "tibble", "tidyselect"] + "depends": ["GGally", "MASS", "dplyr", "fields", "ggforce", "ggplot2", "ggrepel", "gstat", "magrittr", "metR", "pracma", "sp", "tibble", "tidyselect"] }, "klsh": { "name": "klsh", "version": "0.1.0", "sha256": "1r354fd5da6mp7v3048ii09hnghhfwdg6pvmx2ib0cr88ql431sy", - "depends": ["blink", "plyr", "Rcpp", "SnowballC", "stringi"] + "depends": ["Rcpp", "SnowballC", "blink", "plyr", "stringi"] }, "klustR": { "name": "klustR", @@ -76133,13 +76889,19 @@ "name": "kmBlock", "version": "0.1.2", "sha256": "07y1gadn5givrx4ww9vzgcqdkchgd1ndjq65v6ssrbcxsx1lbgxl", - "depends": ["blockmodeling", "doParallel", "doRNG", "foreach", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "blockmodeling", "doParallel", "doRNG", "foreach"] }, "kmc": { "name": "kmc", "version": "0.4-2", "sha256": "0rnrwqsmxcmf4sjd9p2xz7w12lv58wmy2p349s0x4b34b5arf75d", - "depends": ["emplik", "Rcpp", "rootSolve"] + "depends": ["Rcpp", "emplik", "rootSolve"] + }, + "kmeRs": { + "name": "kmeRs", + "version": "2.1.0", + "sha256": "0wybkzf3l5adgchdxklipkmd063x5nsdqrnhjz0kghc27v7h5zdg", + "depends": ["BiocGenerics", "Biostrings", "pwalign"] }, "kmed": { "name": "kmed", @@ -76151,7 +76913,7 @@ "name": "kmer", "version": "1.1.2", "sha256": "0jimn9r0abglwxdl1zqz0lxa99cmj6haydkxjzqfbpx9by80wnww", - "depends": ["openssl", "phylogram", "Rcpp"] + "depends": ["Rcpp", "openssl", "phylogram"] }, "kmi": { "name": "kmi", @@ -76187,12 +76949,12 @@ "name": "knitcitations", "version": "1.0.12", "sha256": "1c7pl8jh61pv0brqanmyfy6s0ipxn312b2hjypcsjaph6b8mhj2q", - "depends": ["digest", "httr", "RefManageR"] + "depends": ["RefManageR", "digest", "httr"] }, "knitr": { "name": "knitr", - "version": "1.47", - "sha256": "1kx6g8ddbigwx3bmq771gwi3din3fxjn59l801904kjaz6dq9pgs", + "version": "1.48", + "sha256": "15zipywk2ayrmy0p7q4d18512c2cgr9kk1lmc7gyi8bxv8k5j6sh", "depends": ["evaluate", "highr", "xfun", "yaml"] }, "knitrBootstrap": { @@ -76203,9 +76965,9 @@ }, "knitrProgressBar": { "name": "knitrProgressBar", - "version": "1.1.0", - "sha256": "18v5jrscfrin3mcs63bpj0q1drxk3zkhlbw93sqh0qrq04d4x02v", - "depends": ["R_oo", "R6"] + "version": "1.1.1", + "sha256": "09jw75m39vxkwwy05if3z280kww3qzyw5d1jplwy76dxgsf3cmz1", + "depends": ["R6", "R_oo"] }, "knitrdata": { "name": "knitrdata", @@ -76217,7 +76979,7 @@ "name": "knitxl", "version": "0.1.0", "sha256": "1l0qq9mqfwkxkkms8xrmf7wzrgg27syrndng7vrrymda67pcxnl4", - "depends": ["commonmark", "glue", "knitr", "magrittr", "openxlsx", "purrr", "R6", "readbitmap", "readr", "stringr", "xml2", "yaml"] + "depends": ["R6", "commonmark", "glue", "knitr", "magrittr", "openxlsx", "purrr", "readbitmap", "readr", "stringr", "xml2", "yaml"] }, "knn_covertree": { "name": "knn.covertree", @@ -76247,7 +77009,7 @@ "name": "knockoff", "version": "0.3.6", "sha256": "1fj6n39i8wfkc16pmkl8jli81nny8sjjfdgklys4mbcavcmlrv5g", - "depends": ["corpcor", "glmnet", "gtools", "Matrix", "Rdsdp", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rdsdp", "corpcor", "glmnet", "gtools"] }, "knotR": { "name": "knotR", @@ -76265,7 +77027,7 @@ "name": "koRpus", "version": "0.13-8", "sha256": "0r9a2fzi3w53kixcjzbij8qmmkjl2p53dazys34s0czb5qrlm6hf", - "depends": ["data_table", "Matrix", "sylly"] + "depends": ["Matrix", "data_table", "sylly"] }, "koRpus_lang_en": { "name": "koRpus.lang.en", @@ -76321,11 +77083,17 @@ "sha256": "0nxrv1a48smgp36zcny38yfcz5dkx1dic4zicqkpvm93vf7jqn5i", "depends": ["data_table", "httr", "jsonlite", "tibble"] }, + "kpcaIG": { + "name": "kpcaIG", + "version": "1.0", + "sha256": "1jnlldr721c2an8npv1w6q4sk6fkamff8a5c3p9kcb575wrk4kqz", + "depends": ["WallomicsData", "ggplot2", "kernlab", "progress", "rgl", "viridis"] + }, "kpcalg": { "name": "kpcalg", "version": "1.0.1", "sha256": "1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52", - "depends": ["energy", "graph", "kernlab", "mgcv", "pcalg", "RSpectra"] + "depends": ["RSpectra", "energy", "graph", "kernlab", "mgcv", "pcalg"] }, "kpeaks": { "name": "kpeaks", @@ -76355,7 +77123,7 @@ "name": "krige", "version": "0.6.2", "sha256": "03xqj8aqlxxxpxadrl64rxxz79k062bx953z958wg3adjip776q4", - "depends": ["coda", "Rcpp"] + "depends": ["Rcpp", "coda"] }, "kriging": { "name": "kriging", @@ -76385,7 +77153,7 @@ "name": "ks", "version": "1.14.2", "sha256": "1jrzh1syq6jdqpp5xmb25hqsk07bpbn6caqhp9mw5zpsdi3k14gi", - "depends": ["FNN", "kernlab", "KernSmooth", "Matrix", "mclust", "mgcv", "multicool", "mvtnorm", "pracma"] + "depends": ["FNN", "KernSmooth", "Matrix", "kernlab", "mclust", "mgcv", "multicool", "mvtnorm", "pracma"] }, "ksNN": { "name": "ksNN", @@ -76415,7 +77183,7 @@ "name": "kssa", "version": "0.0.1", "sha256": "1vrd7zlwigg7ipfq2pjnndp5mwkc0yglvrdiirv3kqm5lq0f14qa", - "depends": ["dplyr", "forecast", "ggplot2", "imputeTS", "magrittr", "Metrics", "missMethods", "rlang", "zoo"] + "depends": ["Metrics", "dplyr", "forecast", "ggplot2", "imputeTS", "magrittr", "missMethods", "rlang", "zoo"] }, "kst": { "name": "kst", @@ -76427,7 +77195,7 @@ "name": "kstIO", "version": "0.4-0", "sha256": "1qv4mg9hi62imk6xsldqprm6aca33qkh13jjihmvddaam7xxcm1z", - "depends": ["kstMatrix", "MASS", "pks", "relations", "sets", "stringr"] + "depends": ["MASS", "kstMatrix", "pks", "relations", "sets", "stringr"] }, "kstMatrix": { "name": "kstMatrix", @@ -76463,7 +77231,7 @@ "name": "kutils", "version": "1.73", "sha256": "0xqg1s48afpn2w0mlqfwz3sj1gdjf05cpxq4z9r01k1476lvh6c9", - "depends": ["foreign", "openxlsx", "plyr", "RUnit", "xtable"] + "depends": ["RUnit", "foreign", "openxlsx", "plyr", "xtable"] }, "kvh": { "name": "kvh", @@ -76473,8 +77241,8 @@ }, "kyotil": { "name": "kyotil", - "version": "2024.5-8", - "sha256": "1jcnk7bx12hjb8ycm1v93bsksgmcwb6m8kn7l4ipc00qwkzhs6r2", + "version": "2024.7-31", + "sha256": "0m0ivjf8masizgljq9l913r0qakwdc38p146nw2p8d4kzzkisx2k", "depends": [] }, "kza": { @@ -76511,7 +77279,7 @@ "name": "l1spectral", "version": "0.99.6", "sha256": "19q30g67pf2gx2h6s3il87n910f011lih3lh9321pkh4idl4awnb", - "depends": ["aricode", "caret", "cvTools", "dplyr", "ggplot2", "glmnet", "igraph", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "aricode", "caret", "cvTools", "dplyr", "ggplot2", "glmnet", "igraph"] }, "l2boost": { "name": "l2boost", @@ -76535,7 +77303,7 @@ "name": "labdsv", "version": "2.1-0", "sha256": "1lawc8fm766p7z6kk0c3lda71i8lywg30znzyfkrx94sbr8r5nlr", - "depends": ["cluster", "MASS", "mgcv", "Rtsne"] + "depends": ["MASS", "Rtsne", "cluster", "mgcv"] }, "label_switching": { "name": "label.switching", @@ -76575,8 +77343,8 @@ }, "labelr": { "name": "labelr", - "version": "0.1.6", - "sha256": "1nf1gr876zr0l9nxisvy1h7k0f3a9f49g257lh967n9iin6vrj4q", + "version": "0.1.7", + "sha256": "0gp0y2jqdjyw3z6zxwrqk690vvgysgrkif4vjpia0szwbh8lw9x0", "depends": [] }, "lablaster": { @@ -76643,13 +77411,13 @@ "name": "lacunr", "version": "1.0.1", "sha256": "132k5vis9k3snhfy3zl0py039pm1b12k70qijdkq11knhlng7b1b", - "depends": ["abind", "data_table", "ggplot2", "Rcpp", "RcppArmadillo", "RcppThread", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "abind", "data_table", "ggplot2", "rlang"] }, "laeken": { "name": "laeken", "version": "0.5.3", "sha256": "02z8jyya6xv0pyfqaalbry174fw44h13s7p1jk5b4h9a9x4myjb0", - "depends": ["boot", "MASS"] + "depends": ["MASS", "boot"] }, "lagged": { "name": "lagged", @@ -76679,12 +77447,12 @@ "name": "lakhesis", "version": "0.0.1", "sha256": "0jbzzpvqid3samq90m3d8p0ac2cfh1qaqiglr19xpzlif63sl34y", - "depends": ["bslib", "ca", "ggplot2", "Rdpack", "readr", "shiny", "shinydashboard"] + "depends": ["Rdpack", "bslib", "ca", "ggplot2", "readr", "shiny", "shinydashboard"] }, "lamW": { "name": "lamW", - "version": "2.2.3", - "sha256": "0jq3xq2ll4lpj8f5aqwazqlb978nzyk7hln4iwlzrlkkcqc35qm1", + "version": "2.2.4", + "sha256": "1h1plx9d6kzgdv20sx7pjfkz54jw11pkqrspgw4hh1kgk6hpbgsz", "depends": ["Rcpp", "RcppParallel"] }, "lambda_r": { @@ -76709,7 +77477,7 @@ "name": "lamle", "version": "0.3.1", "sha256": "08fsylhqpk8hqm9kbqc4vlhmpaddr9cpgjjxvlfc9xqhnyhg7p3d", - "depends": ["fastGHQuad", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "fastGHQuad", "mvtnorm", "numDeriv"] }, "lamme": { "name": "lamme", @@ -76745,7 +77513,7 @@ "name": "landmulti", "version": "0.5.0", "sha256": "1wqkrx4pxi1zzllm802y6wfhfpam7g3nbzgwj71ragk2psxa351a", - "depends": ["emdbook", "landpred", "NMOF", "snow", "survival"] + "depends": ["NMOF", "emdbook", "landpred", "snow", "survival"] }, "landpred": { "name": "landpred", @@ -76763,31 +77531,31 @@ "name": "landscapeR", "version": "1.2", "sha256": "1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy", - "depends": ["raster", "Rcpp"] + "depends": ["Rcpp", "raster"] }, "landscapemetrics": { "name": "landscapemetrics", - "version": "2.1.2", - "sha256": "0inzgd76wm63d35hwxz6if0y5glyl7v3zyl26z0c3sxxpnpq14bm", - "depends": ["cli", "ggplot2", "Rcpp", "RcppArmadillo", "terra", "tibble"] + "version": "2.1.4", + "sha256": "0yq04y8gchwssmaj0xg02jxixx9q7ffdfl91l31q6hkibh4lz8pl", + "depends": ["Rcpp", "RcppArmadillo", "cli", "ggplot2", "terra", "tibble"] }, "landscapetools": { "name": "landscapetools", "version": "0.5.0", "sha256": "11zp6r414nkj8vhsbryzhkxmpal2bva8msaxf1v69xax70ilxyf1", - "depends": ["ggplot2", "raster", "Rcpp", "tibble"] + "depends": ["Rcpp", "ggplot2", "raster", "tibble"] }, "landsepi": { "name": "landsepi", "version": "1.4.0", "sha256": "0hd4cvik5bfw2yjls4wxnzxq7ylcg69yz34ncj7c3zrg4agka1nm", - "depends": ["DBI", "deSolve", "doParallel", "fields", "foreach", "Matrix", "mvtnorm", "Rcpp", "RSQLite", "sf", "sp", "splancs", "testthat"] + "depends": ["DBI", "Matrix", "RSQLite", "Rcpp", "deSolve", "doParallel", "fields", "foreach", "mvtnorm", "sf", "sp", "splancs", "testthat"] }, "langevitour": { "name": "langevitour", "version": "0.7", "sha256": "1q1g2rz5z7wpk5fb0d2rcxw8hi8frs9360n2z6zv8d376r9i1lfr", - "depends": ["assertthat", "crosstalk", "htmlwidgets", "RANN"] + "depends": ["RANN", "assertthat", "crosstalk", "htmlwidgets"] }, "languageR": { "name": "languageR", @@ -76805,7 +77573,7 @@ "name": "languageserver", "version": "0.3.16", "sha256": "1rbjnw30fc58rk2qrhff3wx7in7spllr4kj8mfsfwvl43id54yb0", - "depends": ["callr", "collections", "fs", "jsonlite", "lintr", "R6", "roxygen2", "stringi", "styler", "xml2", "xmlparsedata"] + "depends": ["R6", "callr", "collections", "fs", "jsonlite", "lintr", "roxygen2", "stringi", "styler", "xml2", "xmlparsedata"] }, "languageserversetup": { "name": "languageserversetup", @@ -76817,7 +77585,7 @@ "name": "lans2r", "version": "1.2.0", "sha256": "0hk7rklkic4frp5w6k9kn5xi8hf3s87bgbjm58ca79sh3iyl0cnv", - "depends": ["dplyr", "ggplot2", "R_matlab", "reshape2", "rlang", "tidyr"] + "depends": ["R_matlab", "dplyr", "ggplot2", "reshape2", "rlang", "tidyr"] }, "lar": { "name": "lar", @@ -76829,13 +77597,13 @@ "name": "lares", "version": "5.2.8", "sha256": "1859nwb7ymdamk7akwrmq011var821cww0bg6k89d5sjhs529jd7", - "depends": ["dplyr", "ggplot2", "httr", "jsonlite", "lubridate", "openxlsx", "patchwork", "pROC", "rlang", "rpart", "rpart_plot", "rvest", "stringr", "tidyr", "yaml"] + "depends": ["dplyr", "ggplot2", "httr", "jsonlite", "lubridate", "openxlsx", "pROC", "patchwork", "rlang", "rpart", "rpart_plot", "rvest", "stringr", "tidyr", "yaml"] }, "lareshiny": { "name": "lareshiny", "version": "0.0.3", "sha256": "00pmlq3gz06p1g6xzx5y6n7ybljrhhmjnhi25chv3ii13r3nlfvf", - "depends": ["dplyr", "DT", "htmltools", "miniUI", "shiny", "shinydashboard", "shinyWidgets"] + "depends": ["DT", "dplyr", "htmltools", "miniUI", "shiny", "shinyWidgets", "shinydashboard"] }, "lars": { "name": "lars", @@ -76857,8 +77625,8 @@ }, "latcontrol": { "name": "latcontrol", - "version": "0.1.0", - "sha256": "0y5amp5w8faw69lsi55akqfzgr8bwacvyi0whkxz2ik9dlxcwv3b", + "version": "0.1.1", + "sha256": "1rkzc1kc5x5ndjl4p1jgzqc393cgb0sqm3x3pg5a5ci14j4jf8sf", "depends": ["lavaan"] }, "latdiag": { @@ -76873,29 +77641,35 @@ "sha256": "0isqjsivywv51h1lf4fwvscib8sfgnpvvdq6gj9zzz7nrjpgf7k1", "depends": ["igraph", "statip"] }, + "latent2likert": { + "name": "latent2likert", + "version": "1.2.1", + "sha256": "1fph5jfvmaw3js1gzv8vys5dck0kca9mysnqpyspsh53dwrji40p", + "depends": ["mvtnorm", "sn"] + }, "latentFactoR": { "name": "latentFactoR", "version": "0.0.6", "sha256": "0zcvy7dafigv2zwjyyiwrs7zjn2j933ynfbwsk6qgzfbw1khh9bk", - "depends": ["BBmisc", "EGAnet", "fspe", "googledrive", "ineq", "lavaan", "Matrix", "mlr", "mvtnorm", "psych", "rstudioapi", "xgboost"] + "depends": ["BBmisc", "EGAnet", "Matrix", "fspe", "googledrive", "ineq", "lavaan", "mlr", "mvtnorm", "psych", "rstudioapi", "xgboost"] }, "latentcor": { "name": "latentcor", "version": "2.0.1", "sha256": "0c8ygjdqxb9zs6b42ncqh5va80vxamdphja18x8dazygynmcgjr0", - "depends": ["doFuture", "doRNG", "fMultivar", "foreach", "future", "geometry", "ggplot2", "heatmaply", "MASS", "Matrix", "microbenchmark", "mnormt", "pcaPP", "plotly"] + "depends": ["MASS", "Matrix", "doFuture", "doRNG", "fMultivar", "foreach", "future", "geometry", "ggplot2", "heatmaply", "microbenchmark", "mnormt", "pcaPP", "plotly"] }, "latentgraph": { "name": "latentgraph", "version": "1.1", "sha256": "11h7nrd81licvdikiwwfkz4x9i7drz09w5ns672b7fw0pj4qqgsr", - "depends": ["glmnet", "MASS", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmnet", "pracma"] }, "latentnet": { "name": "latentnet", "version": "2.11.0", "sha256": "1vd004bqcgjip2wrs5znk15yy45ay07cv4pa94x93kyri64v1g2g", - "depends": ["abind", "coda", "ergm", "MASS", "mvtnorm", "network", "sna", "statnet_common"] + "depends": ["MASS", "abind", "coda", "ergm", "mvtnorm", "network", "sna", "statnet_common"] }, "later": { "name": "later", @@ -76925,7 +77699,7 @@ "name": "latrend", "version": "1.6.1", "sha256": "1g5hhl8himv1g3v70vs42jsxn1h04knh73m6yhzkgc2bnj16hr2r", - "depends": ["assertthat", "data_table", "foreach", "magrittr", "matrixStats", "R_utils", "Rdpack", "rlang", "rmarkdown"] + "depends": ["R_utils", "Rdpack", "assertthat", "data_table", "foreach", "magrittr", "matrixStats", "rlang", "rmarkdown"] }, "latte": { "name": "latte", @@ -76943,19 +77717,19 @@ "name": "latticeExtra", "version": "0.6-30", "sha256": "1vcy4xr6c53nbvnxikjnlf5kd3n5hf4d8dzj5d41hj322dlsfl65", - "depends": ["interp", "jpeg", "lattice", "MASS", "png", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "interp", "jpeg", "lattice", "png"] }, "lava": { "name": "lava", "version": "1.8.0", "sha256": "0zz8hzmqd4qa14y52c8gw9hr6gn0d7srffrddxrmhb01rbp9dfcd", - "depends": ["cli", "future_apply", "numDeriv", "progressr", "SQUAREM", "survival"] + "depends": ["SQUAREM", "cli", "future_apply", "numDeriv", "progressr", "survival"] }, "lavaSearch2": { "name": "lavaSearch2", "version": "2.0.3", "sha256": "1z5aaajlgmn6i9jvziz2blrxkrnqfsyfgpflblxac5ljwmnw7yvn", - "depends": ["abind", "doParallel", "ggplot2", "lava", "MASS", "Matrix", "multcomp", "mvtnorm", "nlme", "Rcpp", "RcppArmadillo", "reshape2", "sandwich"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "abind", "doParallel", "ggplot2", "lava", "multcomp", "mvtnorm", "nlme", "reshape2", "sandwich"] }, "lavaan": { "name": "lavaan", @@ -76971,8 +77745,8 @@ }, "lavaanExtra": { "name": "lavaanExtra", - "version": "0.2.0", - "sha256": "0q443wx983vy2i4bn39psw2nwaqzjncdpm7lpwsj7bifjnsic5sb", + "version": "0.2.1", + "sha256": "1h83a7mxyqqlnjk2vddy6ngshinl0sih3m21hl7qbc84spx1g96b", "depends": ["insight", "lavaan"] }, "lavaanPlot": { @@ -76985,13 +77759,13 @@ "name": "lavacreg", "version": "0.2-2", "sha256": "0jbqf52j5iva39lf9w34aabg6wh5i8rczln3l7pbdyz9lmvmgycc", - "depends": ["fastGHQuad", "pracma", "Rcpp", "RcppArmadillo", "SparseGrid"] + "depends": ["Rcpp", "RcppArmadillo", "SparseGrid", "fastGHQuad", "pracma"] }, "lawstat": { "name": "lawstat", "version": "3.6", "sha256": "1bmv3aw4z07ypsb1z65kwdybg6c268vdy46q9nri8xsmrby3fw8b", - "depends": ["Kendall", "mvtnorm", "Rdpack"] + "depends": ["Kendall", "Rdpack", "mvtnorm"] }, "lax": { "name": "lax", @@ -77027,7 +77801,7 @@ "name": "lazyarray", "version": "1.1.0", "sha256": "1bj1a8ab2479cl3d15h9f1fr1hh5d1p3sxpq8y84yzw0rrsxcldd", - "depends": ["fstcore", "R6", "Rcpp", "yaml"] + "depends": ["R6", "Rcpp", "fstcore", "yaml"] }, "lazybar": { "name": "lazybar", @@ -77055,15 +77829,15 @@ }, "lazytrade": { "name": "lazytrade", - "version": "0.5.3", - "sha256": "055wyaf36f5g27wly24i0sbf2k0rriga8xcgn241gszlzagrnh55", - "depends": ["cluster", "dplyr", "ggplot2", "h2o", "lifecycle", "lubridate", "openssl", "readr", "ReinforcementLearning", "stringr", "tibble"] + "version": "0.5.4", + "sha256": "0yl3hndvzavag397071mkr8z7v7hb9b2dzcls5llqjpi7ayvbi8b", + "depends": ["ReinforcementLearning", "cluster", "dplyr", "ggplot2", "h2o", "lifecycle", "lubridate", "openssl", "readr", "stringr", "tibble"] }, "lba": { "name": "lba", "version": "2.4.52", "sha256": "04w275da78naxz1imbw78kpd0rns4ipmjgfs4f23h1q8zp5711fw", - "depends": ["alabama", "MASS", "plotrix", "rgl", "scatterplot3d"] + "depends": ["MASS", "alabama", "plotrix", "rgl", "scatterplot3d"] }, "lbfgs": { "name": "lbfgs", @@ -77075,7 +77849,7 @@ "name": "lbfgsb3c", "version": "2024-3.4", "sha256": "1dsacah7srkg0i9anl283244mvi8chkjkfplzj00dfzcj8nv2cgm", - "depends": ["numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "numDeriv"] }, "lbm": { "name": "lbm", @@ -77087,7 +77861,7 @@ "name": "lboxcox", "version": "1.2", "sha256": "0jklfgw7dwslafsivb9z2q1vgv367kk9gbgjabz04y0kracxaa8q", - "depends": ["doParallel", "dplyr", "foreach", "MASS", "maxLik", "R_utils", "survey"] + "depends": ["MASS", "R_utils", "doParallel", "dplyr", "foreach", "maxLik", "survey"] }, "lbreg": { "name": "lbreg", @@ -77129,13 +77903,13 @@ "name": "lconnect", "version": "0.1.2", "sha256": "097dsq8d5jpvygd1kpdkcdl0pa7clgdyjka03pw9glnamvqpg8a7", - "depends": ["igraph", "Rcpp", "scales", "sf"] + "depends": ["Rcpp", "igraph", "scales", "sf"] }, "lcopula": { "name": "lcopula", "version": "1.0.7", "sha256": "1lzk4lvdlqvnacmak75r4fn1mn2fxfzzlyh94k5r8iqgrpq5zsss", - "depends": ["copula", "Rcpp"] + "depends": ["Rcpp", "copula"] }, "lcpm": { "name": "lcpm", @@ -77165,7 +77939,7 @@ "name": "lcyanalysis", "version": "1.0.4", "sha256": "0pwr6r8nbvmppqwd9gxap6v49l7iaq5syaq11spxp5yc2h3pa2rg", - "depends": ["quantmod", "TTR", "xts", "zoo"] + "depends": ["TTR", "quantmod", "xts", "zoo"] }, "lda": { "name": "lda", @@ -77183,19 +77957,19 @@ "name": "ldamatch", "version": "1.0.3", "sha256": "1vksgild5j7g1skx28jki9kjknc08h2xf715azyfqgbmvbkkljgc", - "depends": ["car", "data_table", "entropy", "foreach", "gmp", "iterators", "iterpc", "kSamples", "RUnit"] + "depends": ["RUnit", "car", "data_table", "entropy", "foreach", "gmp", "iterators", "iterpc", "kSamples"] }, "ldatuning": { "name": "ldatuning", "version": "1.0.2", "sha256": "0367y6k5i4sccwfcm89xyc62qblrlwnm6hsa2jf346rnrfz9hkkc", - "depends": ["ggplot2", "reshape2", "Rmpfr", "scales", "slam", "topicmodels"] + "depends": ["Rmpfr", "ggplot2", "reshape2", "scales", "slam", "topicmodels"] }, "ldbod": { "name": "ldbod", "version": "0.1.2", "sha256": "1ylzkswnhf4jnjx2ijasy49pj78ffx333za0bx2fnf3g85kicqiv", - "depends": ["mnormt", "RANN"] + "depends": ["RANN", "mnormt"] }, "ldbounds": { "name": "ldbounds", @@ -77207,7 +77981,7 @@ "name": "lddmm", "version": "0.4.2", "sha256": "1xnqmhhv9yqkjbwbpz5s25bvzjy99zs6hmy1grbx6f324k3bapq7", - "depends": ["dplyr", "ggplot2", "gtools", "LaplacesDemon", "latex2exp", "plyr", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "reshape2", "rgen", "tidyr"] + "depends": ["LaplacesDemon", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "dplyr", "ggplot2", "gtools", "latex2exp", "plyr", "reshape2", "rgen", "tidyr"] }, "ldhmm": { "name": "ldhmm", @@ -77219,25 +77993,25 @@ "name": "ldsep", "version": "2.1.5", "sha256": "1abjb4ybxqipq5383r82ngy19p84331sfpi817wv7jsv6q99igrb", - "depends": ["abind", "ashr", "corrplot", "doParallel", "foreach", "lpSolve", "matrixStats", "modeest", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "ashr", "corrplot", "doParallel", "foreach", "lpSolve", "matrixStats", "modeest"] }, "ldsr": { "name": "ldsr", "version": "0.0.2", "sha256": "0wmxpglad1mk2c1gi9kxmh149r8ad0l8i2xlfs1hdjb6a4wxsklr", - "depends": ["data_table", "foreach", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "data_table", "foreach"] }, "ldt": { "name": "ldt", - "version": "0.5.2", - "sha256": "0dl9fy83a00rrslg3lp9fa64ps0d3mgll31w1n2m7bn1sq4y75s0", + "version": "0.5.3", + "sha256": "1l6q5rx8iqcsk8475vv0pxnzgxlf4lklpb1pdy3vmrgyffm644i3", "depends": ["BH", "MASS", "Rcpp", "Rdpack", "tdata"] }, "leabRa": { "name": "leabRa", "version": "0.1.0", "sha256": "08yiwyfg9bp4i9w5yyw9p63wyvgj39kd64y3h21j2jmpw8zxncdq", - "depends": ["plyr", "R6"] + "depends": ["R6", "plyr"] }, "leaderCluster": { "name": "leaderCluster", @@ -77261,7 +78035,7 @@ "name": "leafdown", "version": "1.2.0", "sha256": "0gpb37yjsjirglndld84bky83yyhy16qfk1wawkfpjv8j9pdfnqf", - "depends": ["checkmate", "leaflet", "magrittr", "R6", "shiny", "shinyjs"] + "depends": ["R6", "checkmate", "leaflet", "magrittr", "shiny", "shinyjs"] }, "leafem": { "name": "leafem", @@ -77285,7 +78059,7 @@ "name": "leaflet", "version": "2.2.2", "sha256": "1sxq38dcjhn1bkav7fxglzk8nwi5p32jia2nhijcq5j1766pp1yj", - "depends": ["crosstalk", "htmltools", "htmlwidgets", "jquerylib", "leaflet_providers", "magrittr", "png", "raster", "RColorBrewer", "scales", "sp", "viridisLite", "xfun"] + "depends": ["RColorBrewer", "crosstalk", "htmltools", "htmlwidgets", "jquerylib", "leaflet_providers", "magrittr", "png", "raster", "scales", "sp", "viridisLite", "xfun"] }, "leaflet_esri": { "name": "leaflet.esri", @@ -77345,7 +78119,7 @@ "name": "leakyIV", "version": "0.0.1", "sha256": "1pdxyw9sd78nwy70xlrckdjvdgrhcdjywrnbmilrffpzhb6hgky0", - "depends": ["corpcor", "data_table", "foreach", "glasso", "Matrix", "mvnfast"] + "depends": ["Matrix", "corpcor", "data_table", "foreach", "glasso", "mvnfast"] }, "leanpubr": { "name": "leanpubr", @@ -77353,11 +78127,17 @@ "sha256": "0c8pmzn25cwv0wccf30zrrqrs5amlk8iqyyva9vp9976wzwgbxrx", "depends": ["httr", "jsonlite", "xml2"] }, + "leapgp": { + "name": "leapgp", + "version": "1.0.0", + "sha256": "1nvi0r2iipiznjwfvdw34bm071z1j15rj600964grgz88qip0018", + "depends": ["RANN", "cluster", "laGP"] + }, "leapp": { "name": "leapp", "version": "1.3", "sha256": "0w6pi527s4fig50zlwhqsp6zfdgqyyislm01vvp5rvxg7kskr5xr", - "depends": ["corpcor", "MASS", "sva"] + "depends": ["MASS", "corpcor", "sva"] }, "leaps": { "name": "leaps", @@ -77399,7 +78179,7 @@ "name": "leastcostpath", "version": "2.0.12", "sha256": "0nkahghj9vvhcsq8h39y8kvcpgglwhnb0wcdhvkqzwnsparl58kd", - "depends": ["doParallel", "foreach", "gstat", "igraph", "Matrix", "sf", "terra"] + "depends": ["Matrix", "doParallel", "foreach", "gstat", "igraph", "sf", "terra"] }, "ledger": { "name": "ledger", @@ -77417,13 +78197,13 @@ "name": "lefko3", "version": "6.2.1", "sha256": "027x9k6wl59mbwfi1pd8jjhj60sbxi4gw27xb47rksbwkqbp0q4d", - "depends": ["BH", "glmmTMB", "lme4", "MASS", "Matrix", "MuMIn", "pscl", "Rcpp", "RcppArmadillo", "VGAM"] + "depends": ["BH", "MASS", "Matrix", "MuMIn", "Rcpp", "RcppArmadillo", "VGAM", "glmmTMB", "lme4", "pscl"] }, "legion": { "name": "legion", "version": "0.1.2", "sha256": "0463a743n6k21v6nyacmp2li9dngaaww9lh83150621s7pdycw3s", - "depends": ["generics", "greybox", "nloptr", "Rcpp", "RcppArmadillo", "smooth", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "generics", "greybox", "nloptr", "smooth", "zoo"] }, "legislatoR": { "name": "legislatoR", @@ -77453,18 +78233,18 @@ "name": "leiden", "version": "0.4.3.1", "sha256": "1qihzjrwcb09aga27frcdrdv4dp0g295dbrk07fqykbjlb7vpv59", - "depends": ["igraph", "Matrix", "reticulate"] + "depends": ["Matrix", "igraph", "reticulate"] }, "leidenAlg": { "name": "leidenAlg", "version": "1.1.3", "sha256": "0g4gs6rrz3wn97ag7wsfr6qa4zgb75i0k9jc1siii4pf6h689d1x", - "depends": ["igraph", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "sccore"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "igraph", "sccore"] }, "leidenbase": { "name": "leidenbase", - "version": "0.1.27", - "sha256": "09vvkn8czf6w4vib5jf3np2q9w3i8xdl2fbcikvzrb4ah9l8l5n3", + "version": "0.1.30", + "sha256": "1jz2272wvbsgn098wvl0dd9hmvasznwanacw8gf07zk5fslaa5al", "depends": ["igraph"] }, "leiv": { @@ -77525,19 +78305,19 @@ "name": "less", "version": "0.1.0", "sha256": "1pgixa04rjngfg0yhxyg4qhd6g0pj8zyb3q8mfa3fjxzpywdy70a", - "depends": ["caret", "e1071", "FNN", "MLmetrics", "pracma", "R6", "randomForest", "RANN", "rpart", "wordspace"] + "depends": ["FNN", "MLmetrics", "R6", "RANN", "caret", "e1071", "pracma", "randomForest", "rpart", "wordspace"] }, "lessR": { "name": "lessR", - "version": "4.3.3", - "sha256": "0yg9galvwnjzgkfj8hrmrscsdd7qh0g9fqxdqh444wkfarw55n0k", + "version": "4.3.6", + "sha256": "1d0k41fg66g0x6apd6yvc74gnl3mgs16kmykz53qhnd4zi5rj99k", "depends": ["colorspace", "ellipse", "knitr", "lattice", "latticeExtra", "leaps", "openxlsx", "robustbase", "shiny"] }, "lessSEM": { "name": "lessSEM", "version": "1.5.5", "sha256": "10wh8rx3rbr3gprmd5x633k68hxc1afqm6m5l3cinib4acdp0r22", - "depends": ["ggplot2", "lavaan", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo", "RcppParallel", "rlang", "stringr", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "ggplot2", "lavaan", "mvtnorm", "numDeriv", "rlang", "stringr", "tidyr"] }, "lest": { "name": "lest", @@ -77573,7 +78353,7 @@ "name": "lexRankr", "version": "0.5.2", "sha256": "0vb4m4g88k05yhjla1gwp8ck08356r9dzwal6cq7lb6xm6pl5gvi", - "depends": ["igraph", "Rcpp", "SnowballC"] + "depends": ["Rcpp", "SnowballC", "igraph"] }, "lexicon": { "name": "lexicon", @@ -77615,19 +78395,19 @@ "name": "lfl", "version": "2.2.0", "sha256": "02kd7fz12v6xl1f3lv7kkxccln4fm8dmvbn7m9prbiawrbmy16dx", - "depends": ["e1071", "foreach", "forecast", "plyr", "Rcpp", "tseries", "zoo"] + "depends": ["Rcpp", "e1071", "foreach", "forecast", "plyr", "tseries", "zoo"] }, "lfmm": { "name": "lfmm", "version": "1.1", "sha256": "1v2sb2qghwcln3b5rpzhakg562izlzyxzvz49nz74y0rh2gx7g9i", - "depends": ["foreach", "ggplot2", "knitr", "MASS", "purrr", "Rcpp", "RcppEigen", "readr", "rmarkdown", "RSpectra"] + "depends": ["MASS", "RSpectra", "Rcpp", "RcppEigen", "foreach", "ggplot2", "knitr", "purrr", "readr", "rmarkdown"] }, "lfproQC": { "name": "lfproQC", "version": "0.1.0", "sha256": "0cs6x5nqwm1n11i287f26x4lclpmd5vwj9wwnzlr7cr95riwrqxk", - "depends": ["dplyr", "ggplot2", "Hmisc", "laeken", "limma", "magrittr", "MASS", "matrixStats", "pcaMethods", "plotly", "reshape", "reshape2", "tidyr", "tidyselect", "VIM", "vsn"] + "depends": ["Hmisc", "MASS", "VIM", "dplyr", "ggplot2", "laeken", "limma", "magrittr", "matrixStats", "pcaMethods", "plotly", "reshape", "reshape2", "tidyr", "tidyselect", "vsn"] }, "lfstat": { "name": "lfstat", @@ -77651,7 +78431,7 @@ "name": "lgcp", "version": "2.0", "sha256": "0f7s53sypj5l6ry437albypf1j2g3vxh137vfjfx3n84r0bmp5mw", - "depends": ["fields", "iterators", "Matrix", "ncdf4", "raster", "rpanel", "sf", "sp", "spatstat_explore", "spatstat_geom", "spatstat_utils"] + "depends": ["Matrix", "fields", "iterators", "ncdf4", "raster", "rpanel", "sf", "sp", "spatstat_explore", "spatstat_geom", "spatstat_utils"] }, "lglasso": { "name": "lglasso", @@ -77663,7 +78443,7 @@ "name": "lgpr", "version": "1.2.4", "sha256": "1xhkkykig3d2adh7nhvsjg75fxk8h9jdqdsadc9fwbdda354xvg7", - "depends": ["bayesplot", "BH", "ggplot2", "gridExtra", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "RCurl", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "MASS", "RCurl", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "ggplot2", "gridExtra", "rstan", "rstantools"] }, "lgr": { "name": "lgr", @@ -77675,7 +78455,7 @@ "name": "lgrExtra", "version": "0.0.8", "sha256": "19qg67mjq0n5zbrcfhjhxfwl1jlq11iblhczl3m22n2nplpi70q8", - "depends": ["data_table", "lgr", "R6"] + "depends": ["R6", "data_table", "lgr"] }, "lgrdata": { "name": "lgrdata", @@ -77697,8 +78477,8 @@ }, "lhs": { "name": "lhs", - "version": "1.1.6", - "sha256": "0gyjdic714pqvq2jv1v0vh7hl9s83sg2zxx2gdkp38z6xx2cwzz3", + "version": "1.2.0", + "sha256": "0907icg9bl7h8a7wr8a60f59b8y89qj9rx1f7vxiybrjdcy7fjvb", "depends": ["Rcpp"] }, "libbib": { @@ -77721,9 +78501,9 @@ }, "libr": { "name": "libr", - "version": "1.3.3", - "sha256": "0xx4wpkwnraw3w0mf6k3p1l3y27dd1h94wvi3nbalyb8vm6igjiz", - "depends": ["common", "crayon", "data_table", "dplyr", "haven", "openxlsx", "Rcpp", "readr", "readxl", "tibble"] + "version": "1.3.4", + "sha256": "16q65f1slbzlysqcn5mzj7ws8cm59qk3yxgippwhcjmrswrfk5y2", + "depends": ["Rcpp", "common", "crayon", "data_table", "dplyr", "haven", "openxlsx", "readr", "readxl", "tibble"] }, "librarian": { "name": "librarian", @@ -77745,9 +78525,9 @@ }, "lidR": { "name": "lidR", - "version": "4.1.1", - "sha256": "0n0w5qv5mjfnxk7wixwivm68y8pb67sqyfkqinq85rnybhgzshmd", - "depends": ["BH", "classInt", "data_table", "glue", "lazyeval", "Rcpp", "RcppArmadillo", "rgl", "rlas", "sf", "stars", "terra"] + "version": "4.1.2", + "sha256": "1sx903krq6hn9gdz3k7kq88yxzm6hh8wpcjkvgzbrf4z31fc6lp4", + "depends": ["BH", "Rcpp", "RcppArmadillo", "classInt", "data_table", "glue", "lazyeval", "rgl", "rlas", "sf", "stars", "terra"] }, "lidaRtRee": { "name": "lidaRtRee", @@ -77771,7 +78551,7 @@ "name": "lifecontingencies", "version": "1.3.11", "sha256": "1wz0v7abl3g3kgbp613rx5rw2ryxahk1h8bk8d3p5v7wyfwqignh", - "depends": ["markovchain", "Rcpp"] + "depends": ["Rcpp", "markovchain"] }, "lifecourse": { "name": "lifecourse", @@ -77789,7 +78569,7 @@ "name": "lifelogr", "version": "0.1.0", "sha256": "1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav", - "depends": ["dplyr", "fitbitScraper", "ggplot2", "lazyeval", "lubridate", "modelr", "plyr", "R6", "shiny", "stringr", "tibble", "tidyr"] + "depends": ["R6", "dplyr", "fitbitScraper", "ggplot2", "lazyeval", "lubridate", "modelr", "plyr", "shiny", "stringr", "tibble", "tidyr"] }, "liftLRD": { "name": "liftLRD", @@ -77811,9 +78591,9 @@ }, "lightgbm": { "name": "lightgbm", - "version": "4.4.0", - "sha256": "082xmr33ki16i52a3z6lv9niv46pi4dbp0j3qn421sxml4115sf1", - "depends": ["data_table", "jsonlite", "Matrix", "R6"] + "version": "4.5.0", + "sha256": "1bnyhwmmsacl0g1hhgjzdfh2kdxjqfm0r7cs5nz8vk1nrwyck02r", + "depends": ["Matrix", "R6", "data_table", "jsonlite"] }, "lightparser": { "name": "lightparser", @@ -77843,7 +78623,7 @@ "name": "likelihoodAsy", "version": "0.51", "sha256": "0qxwdf6npyj926zd2pbfscgz1z01hwgm6099h882d2l1sim2j9g7", - "depends": ["alabama", "cond", "digest", "nleqslv", "pracma", "Rsolnp"] + "depends": ["Rsolnp", "alabama", "cond", "digest", "nleqslv", "pracma"] }, "likelihoodExplore": { "name": "likelihoodExplore", @@ -77867,7 +78647,7 @@ "name": "lilikoi", "version": "2.1.1", "sha256": "14bz7a1wcgr5fsf6mpsibxa7ks302a1lwnjdjzwh72z490fz8gaw", - "depends": ["car", "caret", "dplyr", "gbm", "ggplot2", "glmnet", "h2o", "impute", "infotheo", "limma", "M3C", "Metrics", "MLmetrics", "pathview", "plyr", "preprocessCore", "princurve", "pROC", "RCy3", "reshape", "reticulate", "RWeka", "scales", "stringr", "survival", "survminer"] + "depends": ["M3C", "MLmetrics", "Metrics", "RCy3", "RWeka", "car", "caret", "dplyr", "gbm", "ggplot2", "glmnet", "h2o", "impute", "infotheo", "limma", "pROC", "pathview", "plyr", "preprocessCore", "princurve", "reshape", "reticulate", "scales", "stringr", "survival", "survminer"] }, "lillies": { "name": "lillies", @@ -77879,13 +78659,13 @@ "name": "limSolve", "version": "1.5.7.1", "sha256": "14jvx0sjjdsm6fxvdck648h12sl4cmy8sgw8jx1744pmpcbm5555", - "depends": ["lpSolve", "MASS", "quadprog"] + "depends": ["MASS", "lpSolve", "quadprog"] }, "lime": { "name": "lime", "version": "0.5.3", "sha256": "157ph4a1h3025nx5v8lw63bbrzk4skw2rnnw1g7h4d3qggcmlhf9", - "depends": ["assertthat", "ggplot2", "glmnet", "gower", "Matrix", "Rcpp", "RcppEigen", "stringi"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "assertthat", "ggplot2", "glmnet", "gower", "stringi"] }, "limexhub": { "name": "limexhub", @@ -77903,7 +78683,7 @@ "name": "limonaid", "version": "0.1.5", "sha256": "04w9g0gv1cihljvmh1y40ygckhhv4jrg970913npvk5nc3id3bqd", - "depends": ["httr", "jsonlite", "R6"] + "depends": ["R6", "httr", "jsonlite"] }, "limorhyde": { "name": "limorhyde", @@ -77915,7 +78695,7 @@ "name": "limorhyde2", "version": "0.1.0", "sha256": "0icwh7vvid7xxlk5jmqqkl6507b4vc0fmpp0wm10lsh0wxibmvwf", - "depends": ["abind", "ashr", "checkmate", "data_table", "DESeq2", "foreach", "HDInterval", "iterators", "limma", "mashr", "pbs", "zeallot"] + "depends": ["DESeq2", "HDInterval", "abind", "ashr", "checkmate", "data_table", "foreach", "iterators", "limma", "mashr", "pbs", "zeallot"] }, "lin_eval": { "name": "lin.eval", @@ -77937,9 +78717,9 @@ }, "lincom": { "name": "lincom", - "version": "1.1", - "sha256": "1krvpk8m2bnkxm3z10sgbx4fcj54kb1sc9n63zjq33ygl4bhnm6d", - "depends": ["Matrix", "Rmosek", "SparseM"] + "version": "1.2", + "sha256": "076pnzdr4h62h4grlk5vcbwl0aikl87ks0my86mbjzg7isyngyja", + "depends": ["Rmosek", "SparseM"] }, "linconGaussR": { "name": "linconGaussR", @@ -77951,7 +78731,7 @@ "name": "lindia", "version": "0.10", "sha256": "0i4mi19pcbpiqbwzj5ga9jhzi0z1qsf779kndyz9sdd9wgxdz8zg", - "depends": ["ggplot2", "gridExtra", "MASS"] + "depends": ["MASS", "ggplot2", "gridExtra"] }, "linearModel": { "name": "linearModel", @@ -77963,19 +78743,19 @@ "name": "lineartestr", "version": "1.0.0", "sha256": "0bzsywk97j2mmsi7pj9267za1q2601crynh9kszwj6xjbg08nvsm", - "depends": ["dplyr", "forecast", "ggplot2", "Matrix", "readr", "sandwich", "tidyr", "viridis"] + "depends": ["Matrix", "dplyr", "forecast", "ggplot2", "readr", "sandwich", "tidyr", "viridis"] }, "linelist": { "name": "linelist", - "version": "1.1.3", - "sha256": "0bpsz61pdx3vl88g006iy5gzl1f2lwsfws6gjm1aki9rsih8fx0x", + "version": "1.1.4", + "sha256": "08rw58pl8l1pdn5mpv0awgjcb0gbsg48ihqk48vydfyjx6683qrv", "depends": ["checkmate", "dplyr", "lifecycle", "rlang", "tidyselect"] }, "linelistBayes": { "name": "linelistBayes", "version": "1.0", "sha256": "08xgqp1ldb76063k4dgyjjdzk50l4x0ddz1q3y4zzf4jfisp9720", - "depends": ["coda", "dplyr", "lubridate", "magrittr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "dplyr", "lubridate", "magrittr"] }, "linemap": { "name": "linemap", @@ -77985,8 +78765,8 @@ }, "lineup": { "name": "lineup", - "version": "0.42", - "sha256": "1k6l3vl9g6cz3jl1fz6r1dm3lfpmis6yylra69c3s8l8l4fz0gzy", + "version": "0.44", + "sha256": "1km5mafaww12pck0n3lgpx7sp0hpzi5h173m4apv8bbiy7cdn6x6", "depends": ["class", "qtl"] }, "lineup2": { @@ -78021,8 +78801,8 @@ }, "lingtypology": { "name": "lingtypology", - "version": "1.1.17", - "sha256": "07r9p41jhrx7hgy5h3bfhnry5b88chbim6nnvisw5v39b2mm1p9n", + "version": "1.1.18", + "sha256": "041l20dsp2jdnpvdlawb0xn6hawym5wkxyhhvbl5y8mfxibdq37h", "depends": ["jsonlite", "leaflet", "leaflet_minicharts", "stringdist"] }, "linguisticsdown": { @@ -78041,13 +78821,13 @@ "name": "link2GI", "version": "0.6-1", "sha256": "0ivzbmvwxx2v0pk7f1y84jxad5pvpl4m6czmjkga52wnk0y5dnn1", - "depends": ["brew", "devtools", "git2r", "R_utils", "renv", "roxygen2", "rstudioapi", "sf", "terra", "xfun", "xml2", "yaml"] + "depends": ["R_utils", "brew", "devtools", "git2r", "renv", "roxygen2", "rstudioapi", "sf", "terra", "xfun", "xml2", "yaml"] }, "linkcomm": { "name": "linkcomm", "version": "1.0-14", "sha256": "15xm4c7sqpid1vjra250dnvdx98qgzbzmvaycf3zqqnqcmy5bw9n", - "depends": ["dynamicTreeCut", "igraph", "RColorBrewer"] + "depends": ["RColorBrewer", "dynamicTreeCut", "igraph"] }, "linkedInadsR": { "name": "linkedInadsR", @@ -78077,7 +78857,7 @@ "name": "linne", "version": "0.0.2", "sha256": "19x13hf3skvxihlpa8wy05vlc94yv7nfs8b1pr8br76wk1xdkjvx", - "depends": ["cli", "magrittr", "purrr", "R6", "rlang", "shiny"] + "depends": ["R6", "cli", "magrittr", "purrr", "rlang", "shiny"] }, "linpk": { "name": "linpk", @@ -78107,7 +78887,7 @@ "name": "lipidmapsR", "version": "1.0.4", "sha256": "19yrqd28z5dvpvi0igarmz9fpv08yx78221nzrwc8yxp6m1agkgc", - "depends": ["httr", "RJSONIO"] + "depends": ["RJSONIO", "httr"] }, "lipidomeR": { "name": "lipidomeR", @@ -78143,7 +78923,7 @@ "name": "list", "version": "9.2.6", "sha256": "1r1j4jk54mcvsgxm2gxpjh66h13frdiq9cszc0wxg1zfrpcisava", - "depends": ["arm", "coda", "corpcor", "gamlss_dist", "magic", "MASS", "mvtnorm", "quadprog", "sandwich", "VGAM"] + "depends": ["MASS", "VGAM", "arm", "coda", "corpcor", "gamlss_dist", "magic", "mvtnorm", "quadprog", "sandwich"] }, "listArray": { "name": "listArray", @@ -78203,7 +78983,7 @@ "name": "lit", "version": "1.0.0", "sha256": "1n5avz33d041bl8b9khqbiyprjdrd5nj1n19134sfpqs7h0wcjzp", - "depends": ["CompQuadForm", "genio", "Rcpp", "RcppArmadillo", "RcppEigen"] + "depends": ["CompQuadForm", "Rcpp", "RcppArmadillo", "RcppEigen", "genio"] }, "litRiddle": { "name": "litRiddle", @@ -78213,15 +78993,15 @@ }, "lite": { "name": "lite", - "version": "1.1.0", - "sha256": "0gfbffh4511c7hwy6js0bip69j340f7qmrjaslnjgyx1nvmi7dxd", + "version": "1.1.1", + "sha256": "005lagzgyc05ssy4bvj6vlfjypqpacqh60bfj8yhj75b81m321a9", "depends": ["chandwich", "exdex", "revdbayes", "rust", "sandwich"] }, "liteq": { "name": "liteq", "version": "1.1.0", "sha256": "0w3w9f6374qwvlrqknavqh9b38n5q1r6aw5zmz5lahvadalwdbwi", - "depends": ["assertthat", "DBI", "rappdirs", "RSQLite"] + "depends": ["DBI", "RSQLite", "assertthat", "rappdirs"] }, "literanger": { "name": "literanger", @@ -78257,7 +79037,7 @@ "name": "live", "version": "1.5.13", "sha256": "1s6yrbwlc4wqszl2yvy1x6d93my18ba8sm8pwfy547cd1x055vig", - "depends": ["breakDown", "data_table", "dplyr", "e1071", "forestmodel", "ggplot2", "gower", "MASS", "mlr", "shiny"] + "depends": ["MASS", "breakDown", "data_table", "dplyr", "e1071", "forestmodel", "ggplot2", "gower", "mlr", "shiny"] }, "liver": { "name": "liver", @@ -78281,7 +79061,7 @@ "name": "llbayesireg", "version": "1.0.0", "sha256": "0jhkmrjkqfm1flwsbpv6060j6g7cj4ngm0drvrlvsiqpni0k96mh", - "depends": ["coda", "ggplot2", "llogistic", "MASS", "MCMCpack", "Rcpp", "rstan", "StanHeaders"] + "depends": ["MASS", "MCMCpack", "Rcpp", "StanHeaders", "coda", "ggplot2", "llogistic", "rstan"] }, "llogistic": { "name": "llogistic", @@ -78335,7 +79115,7 @@ "name": "lmap", "version": "0.1.2", "sha256": "08bdznssicrl493zv5qa1vyjh38zhb83rwnipq83zi4qfp2s8n5p", - "depends": ["dplyr", "fmdu", "ggforce", "ggplot2", "ggrepel", "magrittr", "MASS", "nnet", "Rfast"] + "depends": ["MASS", "Rfast", "dplyr", "fmdu", "ggforce", "ggplot2", "ggrepel", "magrittr", "nnet"] }, "lmboot": { "name": "lmboot", @@ -78347,19 +79127,19 @@ "name": "lmds", "version": "0.1.0", "sha256": "130azb0nc2wwxv0qi8v5s4rd02p9lc92zwn634pv7b8awbw81i65", - "depends": ["assertthat", "dynutils", "irlba", "Matrix"] + "depends": ["Matrix", "assertthat", "dynutils", "irlba"] }, "lme4": { "name": "lme4", - "version": "1.1-35.3", - "sha256": "0ij37wly0d28x143xdkjry5jsj4chlbli2fl9zbp8fkcgh95r1xl", - "depends": ["boot", "lattice", "MASS", "Matrix", "minqa", "nlme", "nloptr", "Rcpp", "RcppEigen"] + "version": "1.1-35.5", + "sha256": "0w2i2d3q19kbx3scd7p7dyfpfpcqb3d5h47y5rb2jr59gvdn8rkx", + "depends": ["MASS", "Matrix", "Rcpp", "RcppEigen", "boot", "lattice", "minqa", "nlme", "nloptr"] }, "lme4breeding": { "name": "lme4breeding", - "version": "1.0.1", - "sha256": "12156nll73lwmf0si6pm46gvkc3pdgqwg6yc9bqdvgdggf7pnjqc", - "depends": ["crayon", "lme4", "Matrix"] + "version": "1.0.30", + "sha256": "1zwbb4f2r0gmdvcnf4sh38ispqb7gifxi7gl04rfyxabbsanmvbb", + "depends": ["Matrix", "crayon", "lme4"] }, "lmeInfo": { "name": "lmeInfo", @@ -78383,13 +79163,13 @@ "name": "lmerTest", "version": "3.1-3", "sha256": "1zd8gqjkazhxgpnnr484xwsq30p62fq8592nzyc171zjyplpbaim", - "depends": ["ggplot2", "lme4", "MASS", "numDeriv"] + "depends": ["MASS", "ggplot2", "lme4", "numDeriv"] }, "lmeresampler": { "name": "lmeresampler", "version": "0.2.4", "sha256": "0y9bawakxyqxdmx74jsyrg3mgiwb22h8pskp4wzv99fl2dp3bfhs", - "depends": ["dplyr", "forcats", "ggdist", "ggplot2", "HLMdiag", "magrittr", "Matrix", "nlmeU", "purrr", "statmod", "tibble", "tidyr"] + "depends": ["HLMdiag", "Matrix", "dplyr", "forcats", "ggdist", "ggplot2", "magrittr", "nlmeU", "purrr", "statmod", "tibble", "tidyr"] }, "lmf": { "name": "lmf", @@ -78401,7 +79181,7 @@ "name": "lmfor", "version": "1.6", "sha256": "0zhahfzphyywdnwkj8c94pxm86v296bvvszzcxp37xi4gayaknm6", - "depends": ["magic", "MASS", "Matrix", "nlme", "spatstat", "spatstat_geom"] + "depends": ["MASS", "Matrix", "magic", "nlme", "spatstat", "spatstat_geom"] }, "lmhelprs": { "name": "lmhelprs", @@ -78431,7 +79211,7 @@ "name": "lmmpar", "version": "0.1.0", "sha256": "1l3zjmlfjfn2wv4yayqzv6qrwaxk2sgx3hjx371b5fs54zspdj20", - "depends": ["bigmemory", "doParallel", "MASS", "matrixcalc", "mnormt", "plyr"] + "depends": ["MASS", "bigmemory", "doParallel", "matrixcalc", "mnormt", "plyr"] }, "lmodel2": { "name": "lmodel2", @@ -78461,7 +79241,7 @@ "name": "lmomco", "version": "2.5.1", "sha256": "0jkqm5cavixb1wfcw00k0pa6y8j252h6mhq5ldcz1qakp07rhzb4", - "depends": ["goftest", "Lmoments", "MASS"] + "depends": ["Lmoments", "MASS", "goftest"] }, "lmreg": { "name": "lmreg", @@ -78489,15 +79269,15 @@ }, "lmtp": { "name": "lmtp", - "version": "1.3.3", - "sha256": "12vq5rail8xdw84ms6nv4ncmdygk485vffyzqc9kcc7wxlbr127i", - "depends": ["checkmate", "cli", "data_table", "future", "generics", "nnls", "origami", "progressr", "R6", "SuperLearner"] + "version": "1.4.0", + "sha256": "10gy8nb64vp36q6yy0kp0g2dvv514gvq4vfc5az4ydlx29qyc6bn", + "depends": ["R6", "SuperLearner", "checkmate", "cli", "data_table", "future", "generics", "nnls", "origami", "progressr", "schoolmath"] }, "lmviz": { "name": "lmviz", "version": "0.2.0", "sha256": "0sl2k02m5bxkb4jg8y666ln0xxhr4dhsfz9hlp55p9smlhycl5s2", - "depends": ["car", "lmtest", "MASS", "mgcv", "rgl", "scatterplot3d", "shiny", "shinyjs"] + "depends": ["MASS", "car", "lmtest", "mgcv", "rgl", "scatterplot3d", "shiny", "shinyjs"] }, "lmw": { "name": "lmw", @@ -78515,19 +79295,19 @@ "name": "lnmCluster", "version": "0.3.1", "sha256": "1y5zf2m4kgysm15xnbd1zc21svif2mxpm1zla4nhg68hljl41j8s", - "depends": ["foreach", "gtools", "MASS", "mclust", "pgmm", "Rcpp", "stringr"] + "depends": ["MASS", "Rcpp", "foreach", "gtools", "mclust", "pgmm", "stringr"] }, "loa": { "name": "loa", "version": "0.2.48.3", "sha256": "1fa1yxpsydx2kjbnj00vn9zv4dw9awng4lxrcllcgzkir9bikgq0", - "depends": ["lattice", "MASS", "mgcv", "OpenStreetMap", "plyr", "png", "RColorBrewer", "RgoogleMaps", "sp"] + "depends": ["MASS", "OpenStreetMap", "RColorBrewer", "RgoogleMaps", "lattice", "mgcv", "plyr", "png", "sp"] }, "loadeR": { "name": "loadeR", "version": "1.2.0", "sha256": "0hxvmhl0xyyxjiinbh55clwdzihpxyw61k1gm6wcvj8hs21y8sl0", - "depends": ["caret", "colourpicker", "config", "data_table", "DT", "echarts4r", "golem", "htmltools", "htmlwidgets", "readxl", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "writexl"] + "depends": ["DT", "caret", "colourpicker", "config", "data_table", "echarts4r", "golem", "htmltools", "htmlwidgets", "readxl", "rlang", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "writexl"] }, "loadings": { "name": "loadings", @@ -78551,13 +79331,13 @@ "name": "locStra", "version": "1.9", "sha256": "0vblsxdlngpa0mzyay9w23nx85riq0dwjc04z20vyha0vdsnkfk6", - "depends": ["bigsnpr", "Matrix", "Rcpp", "RcppEigen", "Rdpack", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppEigen", "Rdpack", "bigsnpr"] }, "locaR": { "name": "locaR", "version": "0.1.2", "sha256": "1qjbf6g2sb5bpgg3fvqbp3xbyrk31lnxwp3c3pfbrnm5llh4w5qd", - "depends": ["matrixStats", "oce", "seewave", "signal", "SynchWave", "tuneR"] + "depends": ["SynchWave", "matrixStats", "oce", "seewave", "signal", "tuneR"] }, "localFDA": { "name": "localFDA", @@ -78599,7 +79379,7 @@ "name": "localgauss", "version": "0.41", "sha256": "0cy8xawkph364828wpivhjikmlvaxhyrr3lv8a8xn21qxjri9mdy", - "depends": ["foreach", "ggplot2", "MASS", "matrixStats"] + "depends": ["MASS", "foreach", "ggplot2", "matrixStats"] }, "localsolver": { "name": "localsolver", @@ -78633,8 +79413,8 @@ }, "locfit": { "name": "locfit", - "version": "1.5-9.9", - "sha256": "1m7ji1ykvffqvs9ly1pzadiwhwxcyv4xivziikmahp0w0sv45lck", + "version": "1.5-9.10", + "sha256": "01mcfsqqqwdf9iggabyckid7rf5c9f0v0hjz8g58fflr2hc6c82c", "depends": ["lattice"] }, "locits": { @@ -78657,9 +79437,9 @@ }, "locuszoomr": { "name": "locuszoomr", - "version": "0.3.0", - "sha256": "1bah3sr0srnvafm69h62hfw5gajsnrasqwzzsk391ga73mqbi8mz", - "depends": ["AnnotationFilter", "BiocGenerics", "cowplot", "dplyr", "ensembldb", "GenomeInfoDb", "GenomicRanges", "gggrid", "ggplot2", "ggrepel", "IRanges", "LDlinkR", "memoise", "plotly", "rlang", "rtracklayer", "zoo"] + "version": "0.3.1", + "sha256": "1rp8gv846jfi688xkl0mbspbj9rzs0bqddl5fmp13vb1kslys8w5", + "depends": ["AnnotationFilter", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "LDlinkR", "cowplot", "dplyr", "ensembldb", "gggrid", "ggplot2", "ggrepel", "memoise", "plotly", "rlang", "rtracklayer", "zoo"] }, "lodGWAS": { "name": "lodGWAS", @@ -78701,7 +79481,7 @@ "name": "log", "version": "1.1.1", "sha256": "1vzssrg2qqxd27b9d36v3mmkhgkx8n724ql9yhl5p8dy28zgsdxd", - "depends": ["cli", "crayon", "R6"] + "depends": ["R6", "cli", "crayon"] }, "log4r": { "name": "log4r", @@ -78713,7 +79493,7 @@ "name": "logKDE", "version": "0.3.2", "sha256": "09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q", - "depends": ["pracma", "Rcpp"] + "depends": ["Rcpp", "pracma"] }, "logNormReg": { "name": "logNormReg", @@ -78731,7 +79511,7 @@ "name": "logbin", "version": "2.0.5", "sha256": "1v8bzhh8bm8704sv68k7dmbs0m7f656s91jhc0p7a6w7vqlmv803", - "depends": ["glm2", "iterators", "itertools2", "Matrix", "turboEM"] + "depends": ["Matrix", "glm2", "iterators", "itertools2", "turboEM"] }, "logconcens": { "name": "logconcens", @@ -78749,7 +79529,7 @@ "name": "logcondiscr", "version": "1.0.6", "sha256": "08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd", - "depends": ["cobs", "Matrix", "mvtnorm"] + "depends": ["Matrix", "cobs", "mvtnorm"] }, "logger": { "name": "logger", @@ -78771,8 +79551,8 @@ }, "loggit2": { "name": "loggit2", - "version": "2.3.0", - "sha256": "06gvfh3jhgfiyxi950648ha123np77xqd2n2rh41pf1ipnhaxpca", + "version": "2.3.1", + "sha256": "1y971pb8v5s57hnvbrz11m2jwfxbid5dwlj4asazd5vf9xq04adx", "depends": [] }, "logiBin": { @@ -78803,13 +79583,13 @@ "name": "login", "version": "0.9.3", "sha256": "0sar30sy0g9pa3qsw68a3mfqwq1c2c5kqs8am8dljvf419pdbyrp", - "depends": ["cookies", "DBI", "digest", "emayili", "htmltools", "shiny", "shinybusy", "shinyjs", "stringr"] + "depends": ["DBI", "cookies", "digest", "emayili", "htmltools", "shiny", "shinybusy", "shinyjs", "stringr"] }, "logistf": { "name": "logistf", "version": "1.26.0", "sha256": "02qrh07c13khlpz3z3f6qq827h37j91i88n7jn3c8ky6r1lfa5pr", - "depends": ["formula_tools", "Matrix", "mgcv", "mice"] + "depends": ["Matrix", "formula_tools", "mgcv", "mice"] }, "logistic4p": { "name": "logistic4p", @@ -78843,9 +79623,9 @@ }, "logitr": { "name": "logitr", - "version": "1.1.1", - "sha256": "0w12rpvyxvmqdlbp8j7394x4c0m0yhv0li7rr4jliygzp4xnh8lz", - "depends": ["generics", "MASS", "nloptr", "randtoolbox", "tibble"] + "version": "1.1.2", + "sha256": "0ns7z0g2r0ypisb924mkzzpd0p9x0zrhnc0slk55g90d4kbi51gv", + "depends": ["MASS", "generics", "nloptr", "randtoolbox", "tibble"] }, "loglognorm": { "name": "loglognorm", @@ -78885,27 +79665,27 @@ }, "lokern": { "name": "lokern", - "version": "1.1-11", - "sha256": "1psv3c59lxn7nrb04v7kydlk4q1cg3v8hb1s1v2al19f0p2jhyhz", + "version": "1.1-12", + "sha256": "0xymmkq5pnqiv5ipakx5w8nl0qhxix0lz8xvn88801r5zygyywbc", "depends": ["sfsmisc"] }, "lolR": { "name": "lolR", "version": "2.1", "sha256": "0lrmn9lzyyfr1y0i7qp6xfpdxyisbkajwg0jkrqkiw687psnh2rc", - "depends": ["abind", "ggplot2", "irlba", "MASS", "pls", "robust", "robustbase"] + "depends": ["MASS", "abind", "ggplot2", "irlba", "pls", "robust", "robustbase"] }, "lolliplot": { "name": "lolliplot", "version": "0.2.2", "sha256": "1rr0j0y298dmmllck11jq36glxczcsz6z7kw9290k77z75fi3vzi", - "depends": ["GenomicRanges", "grImport", "IRanges", "scales"] + "depends": ["GenomicRanges", "IRanges", "grImport", "scales"] }, "lolog": { "name": "lolog", "version": "1.3.1", "sha256": "0hc95ff1radpc8q0xnrvhsgbhf902fhhhkjmj51sxds4mn5wdaj3", - "depends": ["BH", "ggplot2", "intergraph", "Matrix", "network", "Rcpp", "reshape2"] + "depends": ["BH", "Matrix", "Rcpp", "ggplot2", "intergraph", "network", "reshape2"] }, "lomb": { "name": "lomb", @@ -78929,7 +79709,7 @@ "name": "longRPart2", "version": "0.2.3", "sha256": "1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685", - "depends": ["formula_tools", "ggplot2", "MASS", "nlme", "rpart"] + "depends": ["MASS", "formula_tools", "ggplot2", "nlme", "rpart"] }, "longclust": { "name": "longclust", @@ -78939,15 +79719,15 @@ }, "longevity": { "name": "longevity", - "version": "1.0.0", - "sha256": "01apxwslkyk8v6zqwaf0hl391mcgqi7nmkw3wal757d8dawvdnaj", - "depends": ["numDeriv", "Rcpp", "RcppArmadillo", "rlang", "Rsolnp"] + "version": "1.1.1", + "sha256": "1p1sd4ahfbbj1fhgnw914yw06z6q0hbswiwb1gvmc2ks8i2ngi1r", + "depends": ["Rcpp", "RcppArmadillo", "Rsolnp", "numDeriv", "rlang"] }, "longit": { "name": "longit", "version": "0.1.0", "sha256": "08d7pfwd2anx6cdgpyzrn5na3s75z6plbxb11774zcxyzg81rz69", - "depends": ["AICcmodavg", "missForest", "R2jags", "rjags"] + "depends": ["AICcmodavg", "R2jags", "missForest", "rjags"] }, "longitudinal": { "name": "longitudinal", @@ -78959,7 +79739,7 @@ "name": "longitudinalANAL", "version": "0.2", "sha256": "1mvagvjmycnmk3bp02194k7qpwgj94lxzvv30dm0c8jmrhznyh4c", - "depends": ["dlm", "dplyr", "MASS", "tibble"] + "depends": ["MASS", "dlm", "dplyr", "tibble"] }, "longitudinalData": { "name": "longitudinalData", @@ -78981,15 +79761,15 @@ }, "longmemo": { "name": "longmemo", - "version": "1.1-2", - "sha256": "01rj5x9cgscsrakbx9155mbvs35fd3j484cfz5cds9vl521fjr3r", + "version": "1.1-3", + "sha256": "0c4ahci4bf630pcm9zfjwipbq2rb7yi55w91yi6qy39fzdj4v568", "depends": [] }, "longmixr": { "name": "longmixr", "version": "1.0.0", "sha256": "03hh1zrpxqnal4j7rmlllzdhhmrvbdnvdr7rd955hlnkr9946p6c", - "depends": ["checkmate", "ConsensusClusterPlus", "flexmix", "StatMatch"] + "depends": ["ConsensusClusterPlus", "StatMatch", "checkmate", "flexmix"] }, "longpower": { "name": "longpower", @@ -79001,13 +79781,13 @@ "name": "longreadvqs", "version": "0.1.2", "sha256": "07pdnipq4nl7v8sgbfrcz7slz36gnfj3zj6i6pcvq6zh4fy1bw3g", - "depends": ["ape", "Biostrings", "cowplot", "dplyr", "ggplot2", "ggpubr", "magrittr", "plyr", "purrr", "QSutils", "RColorBrewer", "reshape2", "scales", "seqinr", "stringdist", "stringr", "tibble", "tidyr"] + "depends": ["Biostrings", "QSutils", "RColorBrewer", "ape", "cowplot", "dplyr", "ggplot2", "ggpubr", "magrittr", "plyr", "purrr", "reshape2", "scales", "seqinr", "stringdist", "stringr", "tibble", "tidyr"] }, "longsurr": { "name": "longsurr", "version": "1.0", "sha256": "0hlsgf7cfqg3f9m3hmqhsfa8a5xqwb3k0z22dzkrcmxynikc416s", - "depends": ["dplyr", "fda", "fda_usc", "fdapace", "fs", "glue", "grf", "here", "KernSmooth", "lme4", "magrittr", "mgcv", "mvnfast", "plyr", "purrr", "readr", "refund", "Rsurrogate", "stringr", "tibble", "tidyr"] + "depends": ["KernSmooth", "Rsurrogate", "dplyr", "fda", "fda_usc", "fdapace", "fs", "glue", "grf", "here", "lme4", "magrittr", "mgcv", "mvnfast", "plyr", "purrr", "readr", "refund", "stringr", "tibble", "tidyr"] }, "longurl": { "name": "longurl", @@ -79017,15 +79797,15 @@ }, "loo": { "name": "loo", - "version": "2.7.0", - "sha256": "0dnbbflglm7b29vr11rfrawnys9s3rl4h00h6xh9smjyalqz6r3n", + "version": "2.8.0", + "sha256": "0k14cf4mmviwslq931n5l1glalmsdsm7v3hq0m80w71fbaljgdxa", "depends": ["checkmate", "matrixStats", "posterior"] }, "lookout": { "name": "lookout", "version": "0.1.4", "sha256": "0d08804h61dal80sd6z34ls1g5i0qly1zdxankw8gfrb60b41lnx", - "depends": ["evd", "ggplot2", "RANN", "TDAstats", "tidyr"] + "depends": ["RANN", "TDAstats", "evd", "ggplot2", "tidyr"] }, "lookup": { "name": "lookup", @@ -79067,7 +79847,7 @@ "name": "loon.tourr", "version": "0.1.4", "sha256": "1ggy3kkz86lk332pnlihc1i2bki3nks7r2bvl6bprcmds9lg689i", - "depends": ["loon", "loon_ggplot", "MASS", "tibble", "tourr"] + "depends": ["MASS", "loon", "loon_ggplot", "tibble", "tourr"] }, "lorad": { "name": "lorad", @@ -79143,8 +79923,8 @@ }, "lpSolveAPI": { "name": "lpSolveAPI", - "version": "5.5.2.0-17.11", - "sha256": "191zjgyap3kcsvh8fygqqyr9p0agbzm160fzynnpaxf19yp6r3dh", + "version": "5.5.2.0-17.12", + "sha256": "1vvhbgd54k0ynzh1zsrcdy8ry6w642vjk9dhlkig7pamf39aj02g", "depends": [] }, "lpacf": { @@ -79163,7 +79943,7 @@ "name": "lpcde", "version": "0.1.4", "sha256": "0gb130x8177bcw3snrndm87p21na6v3zayqcn9z16rviiyy1nscg", - "depends": ["combinat", "ggplot2", "MASS", "Matrix", "mvtnorm", "purrr", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "combinat", "ggplot2", "mvtnorm", "purrr"] }, "lpda": { "name": "lpda", @@ -79175,7 +79955,7 @@ "name": "lpdensity", "version": "2.4", "sha256": "1vbbvg2wb2jggqls185bwpm8c8ky6693kai3lr5xz4r8f6ivdm29", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "lphom": { "name": "lphom", @@ -79193,7 +79973,7 @@ "name": "lpirfs", "version": "0.2.3", "sha256": "1ncg341xv8bf6jl8m6aqhd2ds8lmi4wf0gxj9fnbi5gbxpbqk50y", - "depends": ["doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "lmtest", "plm", "Rcpp", "RcppArmadillo", "sandwich"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "lmtest", "plm", "sandwich"] }, "lpl": { "name": "lpl", @@ -79201,12 +79981,6 @@ "sha256": "11w2cr5n72p4wds5dm039rdinhvxjfqvrmisksfpf47jddjxhm42", "depends": ["MASS", "survival"] }, - "lpme": { - "name": "lpme", - "version": "1.1.3", - "sha256": "1ch11cwjci98m7952p9wdsh9fj5y1mjya6ayq0q4wmbm824qfpzb", - "depends": ["decon", "flexmix", "locpol", "Rcpp", "RcppArmadillo"] - }, "lpridge": { "name": "lpridge", "version": "1.1-0", @@ -79217,19 +79991,19 @@ "name": "lqmix", "version": "1.0", "sha256": "1pk156gckprp3nvqbhxbbr77njj2gcfmkd8fh8jmzb3bhkf0nlj2", - "depends": ["diagram", "doParallel", "foreach", "quantreg", "Rdpack"] + "depends": ["Rdpack", "diagram", "doParallel", "foreach", "quantreg"] }, "lqmm": { "name": "lqmm", "version": "1.5.8", "sha256": "1ywiyq6k8fb1ffild1r0rglwc6a5sv1kqfqam28337bbxppdxv8i", - "depends": ["nlme", "SparseGrid"] + "depends": ["SparseGrid", "nlme"] }, "lqr": { "name": "lqr", - "version": "5.0", - "sha256": "1qhzsr6sls9f49aa6m72qhffzxqvsvzqlx47h29z8mm37bd74v8b", - "depends": ["MASS", "MomTrunc", "numDeriv", "quantreg", "spatstat_geom"] + "version": "5.2", + "sha256": "073n59niqy27zchmwp0y7a5p8dnkn5libzs5lbbwfnp0j2mkc7n1", + "depends": ["MASS", "MomTrunc", "numDeriv", "quantreg", "spatstat_univar"] }, "lrd": { "name": "lrd", @@ -79257,9 +80031,9 @@ }, "lrstat": { "name": "lrstat", - "version": "0.2.7", - "sha256": "1r25716gq78imyy0f2cja2vh1ldjn5766iaa65x4z5rdcz3gcd80", - "depends": ["lpSolve", "mvtnorm", "Rcpp", "shiny"] + "version": "0.2.9", + "sha256": "046j8v4faj4hfap7hn1bdin7zwxbck8732c3ay8ncxilh46bpgs9", + "depends": ["Rcpp", "lpSolve", "mvtnorm", "shiny"] }, "lsa": { "name": "lsa", @@ -79277,13 +80051,13 @@ "name": "lsbclust", "version": "1.1", "sha256": "1pbai58pfvhfcrd0nj13d54vrn9wrx2xapqhgqa1pkrjwbk5amj7", - "depends": ["clue", "doParallel", "foreach", "ggplot2", "gridExtra", "mvtnorm", "plyr", "Rcpp", "reshape2"] + "depends": ["Rcpp", "clue", "doParallel", "foreach", "ggplot2", "gridExtra", "mvtnorm", "plyr", "reshape2"] }, "lsbs": { "name": "lsbs", "version": "0.1", "sha256": "14aq80zg89lq7hffv1v1m4n7hbzqzxkazcga4y2fq40ij3v7kv6n", - "depends": ["ks", "Matrix", "numDeriv"] + "depends": ["Matrix", "ks", "numDeriv"] }, "lsdbc": { "name": "lsdbc", @@ -79299,9 +80073,9 @@ }, "lsirm12pl": { "name": "lsirm12pl", - "version": "1.3.1", - "sha256": "0w26zq4lylg9x2qyxx4d46phlkih2cdcgjar45k9x7fav8gw6cry", - "depends": ["coda", "dplyr", "fpc", "ggplot2", "GPArotation", "gridExtra", "kernlab", "MCMCpack", "plotly", "pROC", "Rcpp", "RcppArmadillo", "rlang", "spatstat", "spatstat_geom", "spatstat_random"] + "version": "1.3.2", + "sha256": "0fsn1p9jdh3v64b473g1jz0nv0vr1psza9s4lijflyc2rmgnx9cd", + "depends": ["GPArotation", "MCMCpack", "Rcpp", "RcppArmadillo", "coda", "dplyr", "fpc", "ggplot2", "gridExtra", "kernlab", "pROC", "plotly", "plyr", "purrr", "rlang", "spatstat", "spatstat_geom", "spatstat_random", "tidyr"] }, "lsl": { "name": "lsl", @@ -79313,7 +80087,7 @@ "name": "lslx", "version": "0.6.11", "sha256": "1mjkz3zgcajrrkq1igqq0a1rpxwvv41ankr5mj6mcjqpg4ggng1p", - "depends": ["ggplot2", "R6", "Rcpp", "RcppEigen"] + "depends": ["R6", "Rcpp", "RcppEigen", "ggplot2"] }, "lsm": { "name": "lsm", @@ -79337,7 +80111,7 @@ "name": "lspartition", "version": "0.4", "sha256": "1n0pag5l4kx211dl5z9xbqijp7l04jcm0i6jgvkk2b0x9v32q4r5", - "depends": ["combinat", "dplyr", "ggplot2", "MASS", "matrixStats", "mgcv", "pracma"] + "depends": ["MASS", "combinat", "dplyr", "ggplot2", "matrixStats", "mgcv", "pracma"] }, "lspline": { "name": "lspline", @@ -79365,9 +80139,9 @@ }, "ltable": { "name": "ltable", - "version": "2.0.3", - "sha256": "09njp8xmfm1ci94ma8vm89994kkz7p7ka6z3gjc9va8jgpl0r5r3", - "depends": ["clipr"] + "version": "2.0.4", + "sha256": "1z3wbmxmjjwkb7f8qcpyn7a8wnh6q7592j39l4r92gq9gcg39n8x", + "depends": ["MASS", "clipr", "nloptr"] }, "lterdatasampler": { "name": "lterdatasampler", @@ -79413,15 +80187,15 @@ }, "ltsk": { "name": "ltsk", - "version": "1.1.1", - "sha256": "01f0jvm4fihssgfhb062wlqqvrfdikixycxfz93dkqahjmrjz5dl", + "version": "1.1.2", + "sha256": "1l599dc52l5sq9avrb6ij6apxwba3qqa4vgcngmwsn9y76h3wal7", "depends": [] }, "ltsspca": { "name": "ltsspca", "version": "0.1.0", "sha256": "0hgl2zd8y01z8mhnqg1hlv1l7klpwhwk7q8b99pw9vgnh1f2gnfs", - "depends": ["pracma", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "pracma"] }, "ltxsparklines": { "name": "ltxsparklines", @@ -79431,8 +80205,8 @@ }, "luajr": { "name": "luajr", - "version": "0.1.7", - "sha256": "123zvkq57n787l1aqnyddxzd1d45899hlbgb5ikzk1xy85851zsr", + "version": "0.1.8", + "sha256": "0f4p7f6qcpib1gqnsm08lqpcawafk7r5n10yjqf5hw4dpsfz934g", "depends": [] }, "lubridate": { @@ -79451,7 +80225,7 @@ "name": "lucas", "version": "1.0", "sha256": "1ws35f2pq2y7nnik40nj4qpz1d499gfc5isr1409pwy6r5knb78q", - "depends": ["DBI", "plyr", "rpostgis", "RPostgreSQL"] + "depends": ["DBI", "RPostgreSQL", "plyr", "rpostgis"] }, "lucid": { "name": "lucid", @@ -79463,7 +80237,7 @@ "name": "ludic", "version": "0.2.0", "sha256": "08j6y65dxalyrcp14mry7a393if42lfh8smkq1q70dsdk6645j7d", - "depends": ["fGarch", "landpred", "Matrix", "Rcpp", "RcppArmadillo", "rootSolve"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "fGarch", "landpred", "rootSolve"] }, "lue": { "name": "lue", @@ -79475,7 +80249,7 @@ "name": "lulcc", "version": "1.0.4", "sha256": "00ymbp20kbjyzrsrxa262y0y7fj4jgsbqf56aapb657xvafxvy5q", - "depends": ["lattice", "raster", "rasterVis", "ROCR"] + "depends": ["ROCR", "lattice", "raster", "rasterVis"] }, "lumberjack": { "name": "lumberjack", @@ -79493,13 +80267,13 @@ "name": "lutz", "version": "0.3.2", "sha256": "19p41pz2q5abqi6ba4l6fzww90g11lscjz2223ml0gkcryxn3447", - "depends": ["lubridate", "Rcpp"] + "depends": ["Rcpp", "lubridate"] }, "luz": { "name": "luz", "version": "0.4.0", "sha256": "02p1h6rhjvdkw10az1zzz0fd4l8nhn04bwkr71l73a94fbwm6dpz", - "depends": ["cli", "coro", "ellipsis", "fs", "generics", "glue", "magrittr", "prettyunits", "progress", "purrr", "R6", "rlang", "torch", "zeallot"] + "depends": ["R6", "cli", "coro", "ellipsis", "fs", "generics", "glue", "magrittr", "prettyunits", "progress", "purrr", "rlang", "torch", "zeallot"] }, "luzlogr": { "name": "luzlogr", @@ -79511,7 +80285,7 @@ "name": "lvmcomp", "version": "1.2", "sha256": "08hs97bdz4n0bdhvqqq5xywfy140s69c750rn38criq4cw4gm3z7", - "depends": ["coda", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda"] }, "lvmisc": { "name": "lvmisc", @@ -79523,13 +80297,13 @@ "name": "lvnet", "version": "0.3.5", "sha256": "1wqqxavs2s0hmlifyaa1jrlc8hj4z72fkgjckkmh9m2r4jp9zy0g", - "depends": ["corpcor", "dplyr", "glasso", "lavaan", "Matrix", "mvtnorm", "OpenMx", "psych", "qgraph", "semPlot"] + "depends": ["Matrix", "OpenMx", "corpcor", "dplyr", "glasso", "lavaan", "mvtnorm", "psych", "qgraph", "semPlot"] }, "lvplot": { "name": "lvplot", "version": "0.2.1", "sha256": "0zby40866kvqxdz4hk6r0f4rfh7rzmy0n899cjjg5rqzcap7s5di", - "depends": ["ggplot2", "RColorBrewer", "tibble"] + "depends": ["RColorBrewer", "ggplot2", "tibble"] }, "lwgeom": { "name": "lwgeom", @@ -79541,7 +80315,7 @@ "name": "lwqs", "version": "0.5.0", "sha256": "11hkz3b3sgm6v30gwaq463klljjf6c4qx26a5ccc1wl6r439gxqp", - "depends": ["data_table", "gamm4", "ggplot2", "gridExtra", "gWQS", "plyr"] + "depends": ["data_table", "gWQS", "gamm4", "ggplot2", "gridExtra", "plyr"] }, "lzstring": { "name": "lzstring", @@ -79553,13 +80327,13 @@ "name": "m2b", "version": "1.0", "sha256": "0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr", - "depends": ["caret", "caTools", "e1071", "geosphere", "ggplot2", "randomForest"] + "depends": ["caTools", "caret", "e1071", "geosphere", "ggplot2", "randomForest"] }, "m2r": { "name": "m2r", "version": "1.0.2", "sha256": "0vwvpalap4z5x2004c92n0ka7i4l64ry5n8pmxs4vjpd8fyx91gc", - "depends": ["gmp", "memoise", "mpoly", "Rcpp", "stringr", "usethis"] + "depends": ["Rcpp", "gmp", "memoise", "mpoly", "stringr", "usethis"] }, "m5": { "name": "m5", @@ -79589,7 +80363,7 @@ "name": "mDAG", "version": "1.2.2", "sha256": "0k85sl0jmpcpiz92cz6x3kd8jc6yyfv9z4wm1kyaikcf5q4qlad4", - "depends": ["bnlearn", "logistf", "mgm", "nnet", "pcalg", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "bnlearn", "logistf", "mgm", "nnet", "pcalg"] }, "mExplorer": { "name": "mExplorer", @@ -79601,7 +80375,7 @@ "name": "mFD", "version": "1.0.7", "sha256": "1jr5d5669mz4ifacaghnj7109ypfrikagjgxi2a33iqj0g63x3hp", - "depends": ["ade4", "ape", "betapart", "cluster", "dendextend", "FactoMineR", "gawdis", "geometry", "ggplot2", "ggrepel", "Hmisc", "patchwork", "reshape2", "rstatix", "vegan"] + "depends": ["FactoMineR", "Hmisc", "ade4", "ape", "betapart", "cluster", "dendextend", "gawdis", "geometry", "ggplot2", "ggrepel", "patchwork", "reshape2", "rstatix", "vegan"] }, "mFDP": { "name": "mFDP", @@ -79631,13 +80405,13 @@ "name": "mHMMbayes", "version": "1.1.0", "sha256": "1z13zzim90akaz82dbp8s81zyhcd3xmx3wmqvkcaq5wqh2p64s7a", - "depends": ["MCMCpack", "mvtnorm", "Rcpp", "Rdpack"] + "depends": ["MCMCpack", "Rcpp", "Rdpack", "mvtnorm"] }, "mMARCH_AC": { "name": "mMARCH.AC", "version": "2.9.2.0", "sha256": "0lp32m6cfplbm72g0j1cm1c7rcpmy5jrsd3p577p9a4bwqf5ynxc", - "depends": ["abind", "accelerometry", "ActCR", "ActFrag", "cosinor", "cosinor2", "denseFLMM", "dplyr", "GGIR", "ineq", "kableExtra", "minpack_lm", "refund", "survival", "tidyr", "xlsx", "zoo"] + "depends": ["ActCR", "ActFrag", "GGIR", "abind", "accelerometry", "cosinor", "cosinor2", "denseFLMM", "dplyr", "ineq", "kableExtra", "minpack_lm", "refund", "survival", "tidyr", "xlsx", "zoo"] }, "mMPA": { "name": "mMPA", @@ -79661,7 +80435,7 @@ "name": "mRpostman", "version": "1.1.2", "sha256": "0ss00mxk0s3lpxrhy3hszx6hmf7qiycl8vdif1fdzxz5yglki4xa", - "depends": ["assertthat", "base64enc", "curl", "magrittr", "R6", "rvest", "stringi", "stringr", "xml2"] + "depends": ["R6", "assertthat", "base64enc", "curl", "magrittr", "rvest", "stringi", "stringr", "xml2"] }, "mSTEM": { "name": "mSTEM", @@ -79703,7 +80477,7 @@ "name": "maat", "version": "1.1.0", "sha256": "0slyigq90bn2dn09s2ipc13glsywwzs7y5d80zyazwwr51i23xsq", - "depends": ["diagram", "MASS", "readxl", "TestDesign"] + "depends": ["MASS", "TestDesign", "diagram", "readxl"] }, "mable": { "name": "mable", @@ -79715,7 +80489,7 @@ "name": "macc", "version": "1.0.1", "sha256": "1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4", - "depends": ["car", "lme4", "MASS", "nlme", "optimx"] + "depends": ["MASS", "car", "lme4", "nlme", "optimx"] }, "macleish": { "name": "macleish", @@ -79739,7 +80513,7 @@ "name": "macrocol", "version": "0.1.0", "sha256": "1qz5hsxg4ga4blbrakn4bia2l4lh6h5kh4ix7vnm7rl2f7yk4r5a", - "depends": ["httr", "lubridate", "openxlsx", "R_utils", "readxl"] + "depends": ["R_utils", "httr", "lubridate", "openxlsx", "readxl"] }, "macrosyntR": { "name": "macrosyntR", @@ -79757,7 +80531,7 @@ "name": "maczic", "version": "1.0.0", "sha256": "02papbs1pw470cxzwcgvn8px5hvvg1p8zpmcrk5zqmlpzgjsdx2l", - "depends": ["BB", "emplik", "MASS", "mathjaxr", "mediation", "pscl", "sandwich", "survival"] + "depends": ["BB", "MASS", "emplik", "mathjaxr", "mediation", "pscl", "sandwich", "survival"] }, "mada": { "name": "mada", @@ -79787,7 +80561,7 @@ "name": "madness", "version": "0.2.8", "sha256": "1a0jcvy7xq654hcjv0nsjfhwh9fgxzhk7grjy209mgzmkivdinpq", - "depends": ["expm", "Matrix", "matrixcalc"] + "depends": ["Matrix", "expm", "matrixcalc"] }, "madr": { "name": "madr", @@ -79799,13 +80573,13 @@ "name": "madrat", "version": "3.6.4", "sha256": "03wkzpr0nx50li0g69fn2fznfh6nbg4sdpymsilx3387v50vc9vs", - "depends": ["callr", "digest", "igraph", "magclass", "Matrix", "pkgload", "renv", "stringi", "withr", "yaml"] + "depends": ["Matrix", "callr", "digest", "igraph", "magclass", "pkgload", "renv", "stringi", "withr", "yaml"] }, "madshapR": { "name": "madshapR", "version": "1.1.0", "sha256": "035hxkkhxi68id1f3q9qyl82kzphq9als60x7wv03gmzi6fn85zy", - "depends": ["bookdown", "crayon", "dplyr", "DT", "fabR", "forcats", "fs", "ggplot2", "haven", "janitor", "knitr", "lifecycle", "lubridate", "readr", "rlang", "stringr", "tidyr", "tidytext"] + "depends": ["DT", "bookdown", "crayon", "dplyr", "fabR", "forcats", "fs", "ggplot2", "haven", "janitor", "knitr", "lifecycle", "lubridate", "readr", "rlang", "stringr", "tidyr", "tidytext"] }, "madsim": { "name": "madsim", @@ -79813,6 +80587,12 @@ "sha256": "11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq", "depends": [] }, + "maestro": { + "name": "maestro", + "version": "0.1.2", + "sha256": "0mdrphwsr4wywgndi90hif688sah7brx45g62q8hjbyqpvx272ly", + "depends": ["R_utils", "cli", "dplyr", "glue", "logger", "lubridate", "purrr", "rlang", "roxygen2", "tictoc", "timechange"] + }, "magclass": { "name": "magclass", "version": "6.13.2", @@ -79821,9 +80601,9 @@ }, "magi": { "name": "magi", - "version": "1.2.3", - "sha256": "047wzhqkdpjlhz7r6cks7pwvjc4bwv8hsd41zqm5gcvfhwjrnyxm", - "depends": ["BH", "deSolve", "gridBase", "gridExtra", "Rcpp", "RcppArmadillo", "roptim"] + "version": "1.2.4", + "sha256": "0xri39mjq9x8gdj1a69h1sby2i6vcx4vx86zv483128wb0qwgfww", + "depends": ["BH", "Rcpp", "RcppArmadillo", "deSolve", "gridBase", "gridExtra", "roptim"] }, "magic": { "name": "magic", @@ -79841,7 +80621,7 @@ "name": "magicaxis", "version": "2.4.5", "sha256": "04wj0g345mlndd1s7v7klxldxlp293xdgjyrnfpzxckg59804j3d", - "depends": ["celestial", "mapproj", "MASS", "plotrix", "RANN", "sm"] + "depends": ["MASS", "RANN", "celestial", "mapproj", "plotrix", "sm"] }, "magicfor": { "name": "magicfor", @@ -79851,9 +80631,9 @@ }, "magick": { "name": "magick", - "version": "2.8.3", - "sha256": "0yf08ns5qgqi2bzvxvawip521ji2rgvvfrhj747zb6ci5qnm4awk", - "depends": ["curl", "magrittr", "Rcpp"] + "version": "2.8.4", + "sha256": "02pa6kkymj4idawnffqk2fn6zgkw33ib6541vclvg5hd1wvh7j25", + "depends": ["Rcpp", "curl", "magrittr"] }, "magickGUI": { "name": "magickGUI", @@ -79895,7 +80675,7 @@ "name": "mailR", "version": "0.8", "sha256": "0p6vxzpyms1pxdb0j07izzxinw8xfmmbsj35nkypxyjv92qi802k", - "depends": ["assertthat", "R_utils", "rJava", "stringr"] + "depends": ["R_utils", "assertthat", "rJava", "stringr"] }, "mailchimpR": { "name": "mailchimpR", @@ -79919,7 +80699,7 @@ "name": "makeFlow", "version": "1.0.2", "sha256": "0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw", - "depends": ["dplyr", "RColorBrewer"] + "depends": ["RColorBrewer", "dplyr"] }, "makePalette": { "name": "makePalette", @@ -79949,13 +80729,13 @@ "name": "makemyprior", "version": "1.2.1", "sha256": "02zhgskkfr964g813rly0lym4j0msgmyggfgz6l00vcpnffqy9fq", - "depends": ["ggplot2", "MASS", "Matrix", "rlang", "shiny", "shinyBS", "shinyjs", "visNetwork"] + "depends": ["MASS", "Matrix", "ggplot2", "rlang", "shiny", "shinyBS", "shinyjs", "visNetwork"] }, "makepipe": { "name": "makepipe", "version": "0.2.1", "sha256": "0mhabnmpvjamgam63nrjdimn94azn8crafr9jcwsr08lzlbv9kmv", - "depends": ["cli", "nomnoml", "R6", "roxygen2"] + "depends": ["R6", "cli", "nomnoml", "roxygen2"] }, "maketools": { "name": "maketools", @@ -79973,7 +80753,7 @@ "name": "malan", "version": "1.0.3", "sha256": "1m11rxzmvkdvpkcnhjwwgrhkmbylwjpqnn47zyy5wna66c3zzvr6", - "depends": ["dplyr", "igraph", "magrittr", "Rcpp", "RcppArmadillo", "RcppProgress", "tibble", "tidygraph"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "dplyr", "igraph", "magrittr", "tibble", "tidygraph"] }, "malani": { "name": "malani", @@ -79983,9 +80763,9 @@ }, "malariaAtlas": { "name": "malariaAtlas", - "version": "1.5.1", - "sha256": "1fr1dwlv6q8fb0m0jccd2hymi4m62kgjxbkras07zmsk8sci5zmn", - "depends": ["dplyr", "future_apply", "ggplot2", "gridExtra", "httr", "jsonlite", "lifecycle", "lubridate", "ows4R", "rlang", "sf", "stringr", "terra", "tidyr", "tidyterra", "xml2"] + "version": "1.6.1", + "sha256": "05d62m4w93bfx868sk8w6navw8w5z0jx30w2wnzma27gjydyc0z1", + "depends": ["dplyr", "future_apply", "ggnewscale", "ggplot2", "gridExtra", "httr", "jsonlite", "lifecycle", "lubridate", "ows4R", "rlang", "sf", "stringr", "terra", "tidyr", "tidyterra", "xml2"] }, "malaytextr": { "name": "malaytextr", @@ -79997,7 +80777,7 @@ "name": "maldipickr", "version": "1.3.0", "sha256": "1k534c8x3ygf44r7q1nybd8b6gl3pw0h0r6ddwc35jxq1vmxx6qi", - "depends": ["dplyr", "lifecycle", "magrittr", "MALDIquant", "readBrukerFlexData", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["MALDIquant", "dplyr", "lifecycle", "magrittr", "readBrukerFlexData", "rlang", "tibble", "tidyr", "tidyselect"] }, "mallet": { "name": "mallet", @@ -80033,7 +80813,7 @@ "name": "manet", "version": "2.0", "sha256": "1dnacgkdjmn7yiqk71qx5jgfipbpvqfdnrdd8wm0b9p8kgw4x7n4", - "depends": ["combinat", "igraph", "mclust", "MCMCpack"] + "depends": ["MCMCpack", "combinat", "igraph", "mclust"] }, "manhattanly": { "name": "manhattanly", @@ -80051,7 +80831,7 @@ "name": "manifestoR", "version": "1.6.0", "sha256": "1ghzhsd7apib775h2nmv33mvwg5yqwp5w9bn7alppgfa16yznf31", - "depends": ["base64enc", "dplyr", "DT", "functional", "htmltools", "htmlwidgets", "httr", "jsonlite", "magrittr", "NLP", "psych", "purrr", "readr", "tibble", "tidyselect", "tm", "zoo"] + "depends": ["DT", "NLP", "base64enc", "dplyr", "functional", "htmltools", "htmlwidgets", "httr", "jsonlite", "magrittr", "psych", "purrr", "readr", "tibble", "tidyselect", "tm", "zoo"] }, "manifold": { "name": "manifold", @@ -80087,13 +80867,13 @@ "name": "manymodelr", "version": "0.3.7", "sha256": "0kc4y9i21qkcg0pkwlas2mm06s54s70w5ybw4215qjwiy6xax268", - "depends": ["caret", "dplyr", "e1071", "ggplot2", "lme4", "Metrics"] + "depends": ["Metrics", "caret", "dplyr", "e1071", "ggplot2", "lme4"] }, "manymome": { "name": "manymome", "version": "0.2.2", "sha256": "1j7rvk3xdxxji7l1jqi0fgv9x9vwrymdmfpj7plg8vc53apnfy5f", - "depends": ["boot", "ggplot2", "igraph", "lavaan", "MASS", "pbapply"] + "depends": ["MASS", "boot", "ggplot2", "igraph", "lavaan", "pbapply"] }, "manymome_table": { "name": "manymome.table", @@ -80103,15 +80883,15 @@ }, "manynet": { "name": "manynet", - "version": "0.4.4", - "sha256": "1k17yikr7p6pvx5sm3k4xr0954r0a9sllrwywbkwz11w5703sk3y", - "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "network", "pillar", "tidygraph"] + "version": "1.0.2", + "sha256": "0bqd46n30rsy87nc5ylwp7k0wzfmddkq3in38420c4rds3gf1m51", + "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "minMSE", "network", "pillar", "tidygraph"] }, "maotai": { "name": "maotai", "version": "0.2.5", "sha256": "1axr16xs366011vkx3j8mljq98923kscz8wrl9m1zprw3pqif6jr", - "depends": ["cluster", "dbscan", "fastcluster", "labdsv", "Matrix", "pracma", "RANN", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "RSpectra", "Rtsne", "shapes"] + "depends": ["Matrix", "RANN", "RSpectra", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "Rtsne", "cluster", "dbscan", "fastcluster", "labdsv", "pracma", "shapes"] }, "mapSpain": { "name": "mapSpain", @@ -80123,7 +80903,7 @@ "name": "mapStats", "version": "3.1", "sha256": "1jf5dgf9i9339xzk9fbipy9b2fkwdv6sy1ciif921snwj176zck9", - "depends": ["classInt", "colorspace", "Hmisc", "lattice", "RColorBrewer", "reshape2", "sf", "sp", "survey", "ttutils"] + "depends": ["Hmisc", "RColorBrewer", "classInt", "colorspace", "lattice", "reshape2", "sf", "sp", "survey", "ttutils"] }, "mapaccuracy": { "name": "mapaccuracy", @@ -80171,7 +80951,7 @@ "name": "mapdeck", "version": "0.3.5", "sha256": "17z3fd0k5qlmy7yzdlbi105kadak86nwmb6zw39rd10in6j3vfc2", - "depends": ["BH", "colourvalues", "geojsonsf", "geometries", "googlePolylines", "htmlwidgets", "interleave", "jsonify", "magrittr", "rapidjsonr", "Rcpp", "sfheaders", "shiny", "spatialwidget"] + "depends": ["BH", "Rcpp", "colourvalues", "geojsonsf", "geometries", "googlePolylines", "htmlwidgets", "interleave", "jsonify", "magrittr", "rapidjsonr", "sfheaders", "shiny", "spatialwidget"] }, "mapedit": { "name": "mapedit", @@ -80183,13 +80963,19 @@ "name": "mapfit", "version": "1.0.0", "sha256": "0xdkc325y75mcx082b6ncp1n2mfq0yq67j2mkfdcpavnz6s8jdqg", - "depends": ["deformula", "Matrix", "R6", "Rcpp"] + "depends": ["Matrix", "R6", "Rcpp", "deformula"] + }, + "mapgl": { + "name": "mapgl", + "version": "0.1.2", + "sha256": "0azjdkywmyn9njddy1kish69as8dg9yp18qly6fqljbh50c2rlkj", + "depends": ["base64enc", "classInt", "geojsonsf", "htmltools", "htmlwidgets", "rlang", "sf", "terra"] }, "mapi": { "name": "mapi", "version": "1.0.5", "sha256": "1yljvapzkb43i2sbqsmn5aqp95hm8gjkz8m41x1chwyfddrzjsbw", - "depends": ["data_table", "pbapply", "Rcpp", "sf"] + "depends": ["Rcpp", "data_table", "pbapply", "sf"] }, "mapiso": { "name": "mapiso", @@ -80205,9 +80991,9 @@ }, "mapme_biodiversity": { "name": "mapme.biodiversity", - "version": "0.7.0", - "sha256": "093ffdmnfgfjs4ja07xp9knalnqx9il08vbkiq8i0y21g3q11k62", - "depends": ["dplyr", "furrr", "httr", "magrittr", "purrr", "R_utils", "sf", "terra", "tibble", "tidyr"] + "version": "0.8.0", + "sha256": "1fx8779vp4a1k5qy4csqhj5wmhd7aamkzl9mlwk6v4rx667szdzj", + "depends": ["dplyr", "furrr", "httr", "jsonlite", "magrittr", "purrr", "sf", "terra", "tibble", "tidyr"] }, "mapmisc": { "name": "mapmisc", @@ -80219,7 +81005,7 @@ "name": "mapmixture", "version": "1.1.3", "sha256": "0ndr0ds8fjlrx54042ch9ks07b6983fnqj84zih57aa4xk8y8sng", - "depends": ["bslib", "colourpicker", "dplyr", "ggplot2", "ggspatial", "htmltools", "purrr", "rlang", "rnaturalearthdata", "sf", "shiny", "shinyFeedback", "shinyjs", "shinyWidgets", "stringr", "tidyr", "waiter"] + "depends": ["bslib", "colourpicker", "dplyr", "ggplot2", "ggspatial", "htmltools", "purrr", "rlang", "rnaturalearthdata", "sf", "shiny", "shinyFeedback", "shinyWidgets", "shinyjs", "stringr", "tidyr", "waiter"] }, "mapping": { "name": "mapping", @@ -80243,7 +81029,7 @@ "name": "mappoly", "version": "0.4.1", "sha256": "13wifh29i3g8m3gvw058nh3ma7fici2qijnpzb9ph27y67a3b6s9", - "depends": ["cli", "crayon", "dendextend", "dplyr", "fields", "ggplot2", "ggpubr", "ggsci", "magrittr", "plot3D", "plotly", "princurve", "Rcpp", "RcppParallel", "RCurl", "reshape2", "rstudioapi", "smacof", "vcfR", "zoo"] + "depends": ["RCurl", "Rcpp", "RcppParallel", "cli", "crayon", "dendextend", "dplyr", "fields", "ggplot2", "ggpubr", "ggsci", "magrittr", "plot3D", "plotly", "princurve", "reshape2", "rstudioapi", "smacof", "vcfR", "zoo"] }, "mappp": { "name": "mappp", @@ -80285,18 +81071,18 @@ "name": "mapsapi", "version": "0.5.4", "sha256": "0gk5k0zf3yzq7rzw17j7ph3fzpf6q6j777ri242wmi75xzkamrsc", - "depends": ["bitops", "httr", "RgoogleMaps", "sf", "stars", "xml2"] + "depends": ["RgoogleMaps", "bitops", "httr", "sf", "stars", "xml2"] }, "mapscanner": { "name": "mapscanner", - "version": "0.0.6", - "sha256": "017m33v2523rjmspfbzq1xnb3clzmbn4p1qqzp480j71wy5c1dry", - "depends": ["cli", "curl", "fs", "glue", "magick", "magrittr", "memoise", "pdftools", "png", "purrr", "raster", "Rcpp", "reproj", "RNiftyReg", "sf", "slippymath", "tibble"] + "version": "0.1.1", + "sha256": "1fi8zsaylspbwxlh0sw82mhq8m4szl6sggvl3r1c2fwkpckn9qkn", + "depends": ["RNiftyReg", "Rcpp", "cli", "curl", "fs", "glue", "magick", "magrittr", "memoise", "pdftools", "png", "purrr", "raster", "reproj", "sf", "slippymath", "tibble"] }, "mapsf": { "name": "mapsf", - "version": "0.10.1", - "sha256": "134hmnlbc7pmazkfm3jmisklgpnxvjhdwfandxclxy4pfrp92ixq", + "version": "0.11.0", + "sha256": "0vyy88fflkz5iaanbp77dxznw528ikr06q4q4srxcp0ylg71fq4m", "depends": ["classInt", "maplegend", "s2", "sf"] }, "maptiles": { @@ -80357,7 +81143,7 @@ "name": "marcher", "version": "0.0-2", "sha256": "0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q", - "depends": ["magrittr", "Matrix", "minpack_lm", "mvtnorm", "numDeriv", "plyr", "RColorBrewer", "scales", "zoo"] + "depends": ["Matrix", "RColorBrewer", "magrittr", "minpack_lm", "mvtnorm", "numDeriv", "plyr", "scales", "zoo"] }, "marelac": { "name": "marelac", @@ -80381,7 +81167,7 @@ "name": "marginaleffects", "version": "0.21.0", "sha256": "1zq9xkaacgy3d3rsbhdjaprd352mcpbfwn9jazijx6csjs5pxqmp", - "depends": ["checkmate", "data_table", "generics", "insight", "Rcpp", "RcppEigen", "rlang"] + "depends": ["Rcpp", "RcppEigen", "checkmate", "data_table", "generics", "insight", "rlang"] }, "marginalizedRisk": { "name": "marginalizedRisk", @@ -80391,9 +81177,9 @@ }, "margins": { "name": "margins", - "version": "0.3.27", - "sha256": "1jlxg8pwmyd4nzmczp2909rjd68nz7vl8m2g35jywh05b85b0slk", - "depends": ["data_table", "MASS", "prediction"] + "version": "0.3.28", + "sha256": "01wlx5f2kjc4n9md0zr9m73li6iwlngk1rdwifhhwc22hf4jijc9", + "depends": ["MASS", "data_table", "prediction"] }, "marima": { "name": "marima", @@ -80423,13 +81209,13 @@ "name": "marked", "version": "1.2.8", "sha256": "1i5vay60g6ddqnnqdj89yhsqxdcw9yzqpwq9gv7qc1psb8f77052", - "depends": ["bookdown", "coda", "data_table", "expm", "kableExtra", "knitr", "lme4", "Matrix", "numDeriv", "optimx", "R2admb", "Rcpp", "TMB", "truncnorm"] + "depends": ["Matrix", "R2admb", "Rcpp", "TMB", "bookdown", "coda", "data_table", "expm", "kableExtra", "knitr", "lme4", "numDeriv", "optimx", "truncnorm"] }, "markerpen": { "name": "markerpen", "version": "0.1.1", "sha256": "0i9md9vbqkxibjkn37givxzq8mq0232cvv2fyz6g8cj6flxm6vzr", - "depends": ["Rcpp", "RcppEigen", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "RcppEigen"] }, "marketr": { "name": "marketr", @@ -80441,7 +81227,7 @@ "name": "markets", "version": "1.1.5", "sha256": "1by2cm3hlw6jgdd5l30frjm5q83llizp09z6v1ajmb51lkrdnqf5", - "depends": ["dplyr", "Formula", "MASS", "Rcpp", "RcppGSL", "RcppParallel", "rlang"] + "depends": ["Formula", "MASS", "Rcpp", "RcppGSL", "RcppParallel", "dplyr", "rlang"] }, "markmyassignment": { "name": "markmyassignment", @@ -80453,7 +81239,7 @@ "name": "markophylo", "version": "1.0.9", "sha256": "0w6csdvlybfx8azjsrz40mykafgqkl0w23bf2mm2ff5jh6cym66a", - "depends": ["ape", "geiger", "numDeriv", "phangorn", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ape", "geiger", "numDeriv", "phangorn"] }, "markovMSM": { "name": "markovMSM", @@ -80465,25 +81251,25 @@ "name": "markovchain", "version": "0.9.5", "sha256": "0z67i4j676gwvxyf1gw73x7jib7jm5jgyzqvami47mfvc3b2dygf", - "depends": ["expm", "igraph", "Matrix", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppParallel", "expm", "igraph"] }, "markovmix": { "name": "markovmix", "version": "0.1.3", "sha256": "07fzyg7szs4662jww6xpdlvki5wc60g2aw16884ghd8h9ch625yi", - "depends": ["dplyr", "forcats", "pillar", "purrr", "Rcpp", "rlang", "tibble", "tidyr"] + "depends": ["Rcpp", "dplyr", "forcats", "pillar", "purrr", "rlang", "tibble", "tidyr"] }, "marmap": { "name": "marmap", "version": "1.0.10", "sha256": "0zmik6hpc44syknn7k9pbmy01jpnlp4sc9n3rhslrpnks39l0hvq", - "depends": ["adehabitatMA", "DBI", "gdistance", "geosphere", "ggplot2", "ncdf4", "plotrix", "raster", "reshape2", "RSQLite", "shape", "sp"] + "depends": ["DBI", "RSQLite", "adehabitatMA", "gdistance", "geosphere", "ggplot2", "ncdf4", "plotrix", "raster", "reshape2", "shape", "sp"] }, "marp": { "name": "marp", "version": "0.1.0", "sha256": "0vywqsvmhghldrpnh2dpkgz41r7q463whfhgrn38pg8jnyhliiwi", - "depends": ["gtools", "statmod", "VGAM"] + "depends": ["VGAM", "gtools", "statmod"] }, "marqLevAlg": { "name": "marqLevAlg", @@ -80513,13 +81299,13 @@ "name": "mase", "version": "0.1.5.2", "sha256": "0fvbsw6y5whysm70wr74pzj5knnw91gzpihi9snq69q1axg7yc17", - "depends": ["boot", "dplyr", "ellipsis", "glmnet", "Rcpp", "RcppEigen", "Rdpack", "rpms", "survey", "tidyr"] + "depends": ["Rcpp", "RcppEigen", "Rdpack", "boot", "dplyr", "ellipsis", "glmnet", "rpms", "survey", "tidyr"] }, "mashr": { "name": "mashr", "version": "0.2.79", "sha256": "11pqhnzp1svhs565hm0v15ip1pgnl609ssm4d0qzl8vm4xq3d2qm", - "depends": ["abind", "ashr", "assertthat", "mvtnorm", "plyr", "Rcpp", "RcppArmadillo", "RcppGSL", "rmeta", "softImpute"] + "depends": ["Rcpp", "RcppArmadillo", "RcppGSL", "abind", "ashr", "assertthat", "mvtnorm", "plyr", "rmeta", "softImpute"] }, "maskRangeR": { "name": "maskRangeR", @@ -80537,13 +81323,13 @@ "name": "massiveGST", "version": "1.2.3", "sha256": "13qhn15gr4fvri1p843zz7y1q6701qmkxq5lysydfmdaxp5hsaxd", - "depends": ["formattable", "igraph", "msigdbr", "visNetwork", "WriteXLS"] + "depends": ["WriteXLS", "formattable", "igraph", "msigdbr", "visNetwork"] }, "mastif": { "name": "mastif", "version": "2.3", "sha256": "04m2cpcq1n27zmckj6hz6yvzcs6ray53z4nwab3vza9pjaa0m6ab", - "depends": ["cluster", "corrplot", "RANN", "Rcpp", "RcppArmadillo", "repmis", "robustbase", "stringi", "stringr", "xtable"] + "depends": ["RANN", "Rcpp", "RcppArmadillo", "cluster", "corrplot", "repmis", "robustbase", "stringi", "stringr", "xtable"] }, "matRiks": { "name": "matRiks", @@ -80565,15 +81351,15 @@ }, "matchMulti": { "name": "matchMulti", - "version": "1.1.12", - "sha256": "1mkp4pkqhfrv3a0js8yc25gd2ifk8wwyrsskwggyxpqv6pnmpapw", - "depends": ["coin", "dplyr", "magrittr", "MASS", "mvtnorm", "plyr", "rcbsubset", "rlang", "sandwich", "weights"] + "version": "1.1.12.1", + "sha256": "07c02dwim46f511fswbkr7s25inli7nblvf11gb5npz7p7yjc9bw", + "depends": ["MASS", "coin", "dplyr", "magrittr", "mvtnorm", "plyr", "rcbsubset", "rlang", "sandwich", "weights"] }, "matchingMarkets": { "name": "matchingMarkets", "version": "1.0-4", "sha256": "0rrwzbzb8nmqriw0kvk07ypmvbxg429xfv79a60s79qqffc1vryd", - "depends": ["lattice", "lpSolve", "partitions", "Rcpp", "RcppArmadillo", "RcppProgress", "rJava"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "lattice", "lpSolve", "partitions", "rJava"] }, "matchingR": { "name": "matchingR", @@ -80631,8 +81417,8 @@ }, "matlab": { "name": "matlab", - "version": "1.0.4", - "sha256": "1shnq9z7n8yp3l457swrhm3p3nm0j2q4xb9bbxblli030wia520r", + "version": "1.0.4.1", + "sha256": "0l7xqim6sziz3wlxzxc0rjfjrbwidj2l0wri9w5bzabk1dbblgzw", "depends": [] }, "matlab2r": { @@ -80649,15 +81435,15 @@ }, "matlib": { "name": "matlib", - "version": "0.9.6", - "sha256": "0sm1mm5m242j472hddj9nzfyf235i7w8qxhcbgqwxf35fvdmah2h", - "depends": ["car", "MASS", "rgl", "xtable"] + "version": "0.9.8", + "sha256": "0nknc17wxdf7svp91ak6y1h83yyacqfz528lwyqg9zdfcnax08nm", + "depends": ["MASS", "car", "dplyr", "rgl", "xtable"] }, "matman": { "name": "matman", "version": "1.1.3", "sha256": "0mwxxqqlg6yydc06hrjqk5ly686s21w5i5z40axxwkmpzyz84sqv", - "depends": ["data_table", "dplyr", "DT", "forecast", "lubridate", "parsedate", "plotly", "shiny", "shinydashboard", "shinyWidgets", "tidyr", "tidyselect"] + "depends": ["DT", "data_table", "dplyr", "forecast", "lubridate", "parsedate", "plotly", "shiny", "shinyWidgets", "shinydashboard", "tidyr", "tidyselect"] }, "matpow": { "name": "matpow", @@ -80669,13 +81455,13 @@ "name": "matrans", "version": "0.1.0", "sha256": "0j9a82wccdrgd3jqhwqv8bjf2c5w55hk9cl74ylzqrgnv45xr1cd", - "depends": ["caret", "formatR", "MASS", "quadprog"] + "depends": ["MASS", "caret", "formatR", "quadprog"] }, "matricks": { "name": "matricks", "version": "0.8.2", "sha256": "0ik61jxd4hpw149dbbmis3wsfsim60mw9d0qjwh047qfg6sm1vsc", - "depends": ["ggplot2", "Rcpp", "reshape2", "rlang"] + "depends": ["Rcpp", "ggplot2", "reshape2", "rlang"] }, "matrisk": { "name": "matrisk", @@ -80699,7 +81485,7 @@ "name": "matrixProfile", "version": "0.5.0", "sha256": "0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g", - "depends": ["fftw", "signal", "TTR", "zoo"] + "depends": ["TTR", "fftw", "signal", "zoo"] }, "matrixStats": { "name": "matrixStats", @@ -80735,13 +81521,19 @@ "name": "matrixdist", "version": "1.1.9", "sha256": "1lf4ar7fl3agcydcv01q0zqlnwdd501fk132nlbwb03ng6dmd2im", - "depends": ["nnet", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "nnet", "reshape2"] + }, + "matrixmodp": { + "name": "matrixmodp", + "version": "0.2.0", + "sha256": "0axl3nvzsalxdmislw1vm9fg7dw39xqs7yr5jfl49h4l7h6ljzix", + "depends": [] }, "matrixprofiler": { "name": "matrixprofiler", "version": "0.1.9", "sha256": "1kqpxg0mvyc494nr2whrcwjaa51jm5n2mxjwhdcr87jqp5y3hma6", - "depends": ["checkmate", "Rcpp", "RcppParallel", "RcppProgress", "RcppThread"] + "depends": ["Rcpp", "RcppParallel", "RcppProgress", "RcppThread", "checkmate"] }, "matrixsampling": { "name": "matrixsampling", @@ -80753,13 +81545,13 @@ "name": "matrixset", "version": "0.3.0", "sha256": "0ijh8nlg86f31az7x82px1m0805mrfal5xdpwzlalgzbq0irg69v", - "depends": ["cli", "crayon", "dplyr", "Matrix", "pillar", "purrr", "R6", "Rcpp", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["Matrix", "R6", "Rcpp", "cli", "crayon", "dplyr", "pillar", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "matsbyname": { "name": "matsbyname", "version": "0.6.10", "sha256": "1444a6gl24ra64p5zldia0kyn4hq01g5r49rc2mv0zq0gygxv67d", - "depends": ["assertthat", "dplyr", "lifecycle", "magrittr", "Matrix", "matrixcalc", "purrr", "RCLabels", "rlang", "tibble"] + "depends": ["Matrix", "RCLabels", "assertthat", "dplyr", "lifecycle", "magrittr", "matrixcalc", "purrr", "rlang", "tibble"] }, "matsindf": { "name": "matsindf", @@ -80777,7 +81569,7 @@ "name": "mau", "version": "0.1.2", "sha256": "1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5", - "depends": ["data_table", "ggplot2", "gtools", "igraph", "RColorBrewer", "Rdpack", "stringr"] + "depends": ["RColorBrewer", "Rdpack", "data_table", "ggplot2", "gtools", "igraph", "stringr"] }, "mauricer": { "name": "mauricer", @@ -80795,7 +81587,7 @@ "name": "maxcombo", "version": "1.0", "sha256": "1hwv38a07ry5fv53r2vizifj83xf98znix8nx4zshqyk38vblgp5", - "depends": ["dplyr", "magrittr", "MCMCpack", "mstate", "mvtnorm", "purrr", "rlang", "survival"] + "depends": ["MCMCpack", "dplyr", "magrittr", "mstate", "mvtnorm", "purrr", "rlang", "survival"] }, "maximin": { "name": "maximin", @@ -80821,12 +81613,6 @@ "sha256": "05l24dksdgb43dpi4py4qkh8j9ynrnsglydy3gph1b61ygnfa8gx", "depends": ["glmnet"] }, - "maxnodf": { - "name": "maxnodf", - "version": "1.0.0", - "sha256": "1czhy3177bb4a5rxi2s4j3c9xn9f0b2pbkdka1dzw6ga389wdwb3", - "depends": ["Rcpp"] - }, "maxstat": { "name": "maxstat", "version": "0.7-25", @@ -80873,13 +81659,13 @@ "name": "mbbe", "version": "0.1.0", "sha256": "0m6nn4vv7lxr5y3bbpqjab8ahal9qbl7v6fxr848s1ida3zvkkxm", - "depends": ["dplyr", "emmeans", "furrr", "future", "ggplot2", "jsonlite", "magrittr", "nlme", "PKNCA", "processx", "ps", "stringr", "tictoc", "xml2"] + "depends": ["PKNCA", "dplyr", "emmeans", "furrr", "future", "ggplot2", "jsonlite", "magrittr", "nlme", "processx", "ps", "stringr", "tictoc", "xml2"] }, "mbbefd": { "name": "mbbefd", "version": "0.8.11", "sha256": "0yhrbyydbxibxxffk5y35yv7k0i8aq8qdkkzgpvzfmyipl1lgbnv", - "depends": ["actuar", "alabama", "fitdistrplus", "gsl", "MASS", "Rcpp"] + "depends": ["MASS", "Rcpp", "actuar", "alabama", "fitdistrplus", "gsl"] }, "mbend": { "name": "mbend", @@ -80915,13 +81701,13 @@ "name": "mboost", "version": "2.9-10", "sha256": "13dhs3q9gf5n6kwf6j3b29gvwxnkycfkpsw5fr4lnhllm9zs84z7", - "depends": ["lattice", "Matrix", "nnls", "partykit", "quadprog", "stabs", "survival"] + "depends": ["Matrix", "lattice", "nnls", "partykit", "quadprog", "stabs", "survival"] }, "mbr": { "name": "mbr", "version": "0.0.1", "sha256": "08534d0ssj5zli7880a2wzl46ydf87gn5xlv6xp0iph71wlpc52y", - "depends": ["data_table", "dplR", "MASS", "Matrix", "Rfast"] + "depends": ["MASS", "Matrix", "Rfast", "data_table", "dplR"] }, "mbrdr": { "name": "mbrdr", @@ -80945,7 +81731,7 @@ "name": "mbsts", "version": "3.0", "sha256": "0qgb74ah1jq6rla2qkid1i75xjp2l9qxkpbbqilhzqg64rkcn9ha", - "depends": ["BBmisc", "ggplot2", "KFAS", "MASS", "Matrix", "matrixStats", "MCMCpack", "pscl", "reshape2"] + "depends": ["BBmisc", "KFAS", "MASS", "MCMCpack", "Matrix", "ggplot2", "matrixStats", "pscl", "reshape2"] }, "mc_heterogeneity": { "name": "mc.heterogeneity", @@ -80965,6 +81751,12 @@ "sha256": "058da7hhcizh902pj99wmf5mhfd6fhpjvf6cprbsl0fx19x9l14w", "depends": ["BBmisc", "checkmate", "ecr", "ggplot2", "grapherator", "gtools", "igraph", "qgraph", "vegan", "viridis"] }, + "mcODE": { + "name": "mcODE", + "version": "1.1", + "sha256": "1rnh9hqw97gxxs3ai5nnaszmyzyvv558p2b25i5h4218a2pkf8h3", + "depends": [] + }, "mcStats": { "name": "mcStats", "version": "0.1.2", @@ -80973,15 +81765,15 @@ }, "mcauchyd": { "name": "mcauchyd", - "version": "1.2.0", - "sha256": "18615ac3z8vgkqr0xslaama9sbvn7m4p116vv8l2wz65f623l0d4", - "depends": ["lifecycle", "MASS", "rgl"] + "version": "1.3.2", + "sha256": "1n0vgp526wlyf553n2cvxkawzxdvvzqhgar5sqnhiidas7iri3zc", + "depends": ["MASS", "data_table", "lifecycle", "rgl"] }, "mcb": { "name": "mcb", "version": "0.1.15", "sha256": "0k986m2vyvfqxw3jmlyvf6r5bq68y92fymy03lffq5lmiqhypixj", - "depends": ["ggplot2", "glmnet", "lars", "leaps", "MASS", "ncvreg", "reshape2", "smoothmest"] + "depends": ["MASS", "ggplot2", "glmnet", "lars", "leaps", "ncvreg", "reshape2", "smoothmest"] }, "mcbiopi": { "name": "mcbiopi", @@ -80993,25 +81785,25 @@ "name": "mcboost", "version": "0.4.3", "sha256": "17zflvafz6w91lxbr8saasxp9bn18bla1jqg53fka2k8fnziz4g8", - "depends": ["backports", "checkmate", "data_table", "glmnet", "mlr3", "mlr3misc", "mlr3pipelines", "R6", "rmarkdown", "rpart"] + "depends": ["R6", "backports", "checkmate", "data_table", "glmnet", "mlr3", "mlr3misc", "mlr3pipelines", "rmarkdown", "rpart"] }, "mcca": { "name": "mcca", "version": "0.7.0", "sha256": "01nm0plgkik241qhd06v1vs84lf7agc0vkxa27cpr5qlfl4cm4zb", - "depends": ["caret", "e1071", "MASS", "nnet", "pROC", "rgl", "rpart"] + "depends": ["MASS", "caret", "e1071", "nnet", "pROC", "rgl", "rpart"] }, "mccca": { "name": "mccca", "version": "1.1.0.1", "sha256": "1bmcncm53pbmc9dv61rwmp8xk9zf70ihw2gg6d0lmd1sgmf5i4hz", - "depends": ["ggplot2", "magic", "RColorBrewer", "Rcpp", "RcppArmadillo", "stringr", "wordcloud"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "ggplot2", "magic", "stringr", "wordcloud"] }, "mccf1": { "name": "mccf1", "version": "1.1", "sha256": "023pvjfc1iv7hac3gz5rakg6ljs92j0qfm4givad5iiwv5n4k3zr", - "depends": ["ggplot2", "ROCR"] + "depends": ["ROCR", "ggplot2"] }, "mcclust": { "name": "mcclust", @@ -81041,7 +81833,7 @@ "name": "mcen", "version": "1.2.1", "sha256": "16f7860h6hbpnv1drk793mz3vwm9q4ar6xkag05z0p22p69mm4qy", - "depends": ["faraway", "flexclust", "glmnet", "Matrix"] + "depends": ["Matrix", "faraway", "flexclust", "glmnet"] }, "mcga": { "name": "mcga", @@ -81051,8 +81843,8 @@ }, "mcgf": { "name": "mcgf", - "version": "1.1.0", - "sha256": "0lgvd9ibyg2rbccz9q5mmh0d85bli8qi7jwwh5kh5bbp754vss1f", + "version": "1.1.1", + "sha256": "1xgrswmz4ra18qh3m46l4xkj13bq0lx15flhnx97j16y5dq3rl1k", "depends": ["MASS", "sp"] }, "mcgibbsit": { @@ -81065,7 +81857,7 @@ "name": "mclm", "version": "0.2.7", "sha256": "1vpg6xsa8im60ld5mlm6yhf2prs6kmwn0sn12b9g8v27dgw3h0iq", - "depends": ["ca", "crayon", "dplyr", "Rcpp", "readr", "stringi", "stringr", "tibble", "tm", "xml2", "yaml"] + "depends": ["Rcpp", "ca", "crayon", "dplyr", "readr", "stringi", "stringr", "tibble", "tm", "xml2", "yaml"] }, "mclogit": { "name": "mclogit", @@ -81083,7 +81875,7 @@ "name": "mclustAddons", "version": "0.8", "sha256": "12wlj1rl5d384fydk27rpm62ghmwv3iax4nfsrcpczxrfk8zshc9", - "depends": ["foreach", "iterators", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "foreach", "iterators", "mclust"] }, "mclustcomp": { "name": "mclustcomp", @@ -81101,7 +81893,7 @@ "name": "mcmcOutput", "version": "0.1.3", "sha256": "1jw4wyppzlnxaa3iahbwx4gxs3zvppy980rc92dvy18y2sr5138v", - "depends": ["coda", "HDInterval", "MASS"] + "depends": ["HDInterval", "MASS", "coda"] }, "mcmcderive": { "name": "mcmcderive", @@ -81131,19 +81923,19 @@ "name": "mcmcsae", "version": "0.7.7", "sha256": "0q3rw6xbx5wqpa0hf0jldplcs9ry80bck95bn9g6bhzj0128ysm4", - "depends": ["GIGrvg", "loo", "Matrix", "matrixStats", "Rcpp", "RcppEigen"] + "depends": ["GIGrvg", "Matrix", "Rcpp", "RcppEigen", "loo", "matrixStats"] }, "mcmcse": { "name": "mcmcse", "version": "1.5-0", "sha256": "0qvlkv7j35h2lxdzhbsbsrf1cgsbgf4in7lxgwmx7vs85k10v0ja", - "depends": ["ellipse", "fftwtools", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["Rcpp", "RcppArmadillo", "ellipse", "fftwtools", "testthat"] }, "mcmsupply": { "name": "mcmsupply", "version": "1.1.1", "sha256": "1130nl2qz36gyw9d6nqrq2zpa9p4171n45mqmjqzx8jbrp9za7y3", - "depends": ["abind", "dplyr", "foreach", "ggplot2", "magrittr", "plyr", "R2jags", "readxl", "rlang", "runjags", "stringr", "tibble", "tidybayes", "tidyr", "tidyverse"] + "depends": ["R2jags", "abind", "dplyr", "foreach", "ggplot2", "magrittr", "plyr", "readxl", "rlang", "runjags", "stringr", "tibble", "tidybayes", "tidyr", "tidyverse"] }, "mco": { "name": "mco", @@ -81155,7 +81947,7 @@ "name": "mcompanion", "version": "0.6", "sha256": "0d4q4rc8qscjw7d9xhpc6lr9v14vy0jxzzpn68lxaxi4qr31jwrg", - "depends": ["gbutils", "MASS", "Matrix", "Rdpack"] + "depends": ["MASS", "Matrix", "Rdpack", "gbutils"] }, "mcount": { "name": "mcount", @@ -81173,7 +81965,7 @@ "name": "mcparallelDo", "version": "1.1.0", "sha256": "1ivh0d4f7ks6xwcjywk62h1zhr7h5bbhzpisky7973wi4g8vipbn", - "depends": ["checkmate", "R_utils", "R6"] + "depends": ["R6", "R_utils", "checkmate"] }, "mcprofile": { "name": "mcprofile", @@ -81197,7 +81989,7 @@ "name": "mcradds", "version": "1.1.0", "sha256": "11pa8y6q20rqsflxlsnyjq79l6xbfqy1739zvnvdl024mv0jvrw7", - "depends": ["boot", "checkmate", "DescTools", "dplyr", "formatters", "ggplot2", "lifecycle", "magrittr", "mcr", "pROC", "purrr", "rlang", "tibble", "tidyr", "VCA"] + "depends": ["DescTools", "VCA", "boot", "checkmate", "dplyr", "formatters", "ggplot2", "lifecycle", "magrittr", "mcr", "pROC", "purrr", "rlang", "tibble", "tidyr"] }, "mcreplicate": { "name": "mcreplicate", @@ -81207,9 +81999,9 @@ }, "mcstatsim": { "name": "mcstatsim", - "version": "0.1.0", - "sha256": "13ifkqx2c9v0pvkjg0r0sy07s2q7rp7wfx4q27vx4d7f7yk6va6r", - "depends": [] + "version": "0.5.0", + "sha256": "0v1nxn4jbk941x6vskpiqrgdzfijlhlwzhavwzyy19x2f3wc91iy", + "depends": ["pbapply"] }, "mctest": { "name": "mctest", @@ -81257,7 +82049,7 @@ "name": "md4r", "version": "0.5.2.0", "sha256": "1kdy6izd4gxqf4bdrb3hav3mhn1gw9bjgmdk4r6j9qhm7mmkkkps", - "depends": ["checkmate", "cli", "glue", "purrr", "Rcpp", "stringr", "textutils", "tibble"] + "depends": ["Rcpp", "checkmate", "cli", "glue", "purrr", "stringr", "textutils", "tibble"] }, "mda": { "name": "mda", @@ -81311,13 +82103,13 @@ "name": "mdgc", "version": "0.1.7", "sha256": "0p2dfvngyv9rwbcjfw7s3diim9k2gbjn7qsmh7ybxhd529y4w0yl", - "depends": ["BH", "psqn", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "psqn", "testthat"] }, "mdhglm": { "name": "mdhglm", "version": "1.8", "sha256": "1myky8d2ilwdliqrzd2i5qvja82iz7w6qbigl7h4znpk8pdgrjb3", - "depends": ["boot", "Matrix", "mvtnorm"] + "depends": ["Matrix", "boot", "mvtnorm"] }, "mdir_logrank": { "name": "mdir.logrank", @@ -81327,9 +82119,9 @@ }, "mdmb": { "name": "mdmb", - "version": "1.8-7", - "sha256": "0qx1ipq8ra2c3f4hnnlj0h1viky5ld694ga6rkp53196s2yn0vhy", - "depends": ["CDM", "coda", "miceadds", "Rcpp", "RcppArmadillo", "sirt"] + "version": "1.9-22", + "sha256": "09lsp0niazw0v9pqnw5inw65j7p0irwwnxrr09iqbpjd7gqnlkrz", + "depends": ["CDM", "Rcpp", "RcppArmadillo", "coda", "miceadds", "sirt"] }, "mdpeer": { "name": "mdpeer", @@ -81359,13 +82151,13 @@ "name": "mdsr", "version": "0.2.7", "sha256": "0b1z1ng6zzqwrn0a5i17jcqwh5yyv7nqyghp8w9r6ik1q46hmvz1", - "depends": ["babynames", "DBI", "dbplyr", "downloader", "dplyr", "fs", "ggplot2", "htmlwidgets", "kableExtra", "RMariaDB", "skimr", "stringr", "tibble", "webshot2"] + "depends": ["DBI", "RMariaDB", "babynames", "dbplyr", "downloader", "dplyr", "fs", "ggplot2", "htmlwidgets", "kableExtra", "skimr", "stringr", "tibble", "webshot2"] }, "mdw": { "name": "mdw", - "version": "2020.6-17", - "sha256": "0jjajgb1w3vx7vqn2z90xq39hvbcrrd2ky8p31g5absqwwm7lwpa", - "depends": ["kyotil", "MASS", "Matrix"] + "version": "2024.8-1", + "sha256": "1qvz84qrsm904ia8vr0n07magkj1ydgiw1hgmncchmq8l1a2fw6f", + "depends": ["MASS", "Matrix", "kyotil"] }, "meanShiftR": { "name": "meanShiftR", @@ -81389,7 +82181,7 @@ "name": "measr", "version": "1.0.0", "sha256": "1w2b1g7zivilc4pip09yi5fyx052g835vax5ja6bl36725h8giwk", - "depends": ["BH", "dcm2", "dplyr", "fs", "glue", "loo", "magrittr", "posterior", "psych", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dcm2", "dplyr", "fs", "glue", "loo", "magrittr", "posterior", "psych", "rlang", "rstan", "rstantools", "tibble", "tidyr"] }, "measuRing": { "name": "measuRing", @@ -81423,9 +82215,9 @@ }, "meconetcomp": { "name": "meconetcomp", - "version": "0.5.0", - "sha256": "0fxgm8bhjs1vn1l0vb7jx7gvg3w4k0bwng66sfp87l5b0z2j082q", - "depends": ["dplyr", "ggplot2", "ggpubr", "igraph", "magrittr", "microeco", "R6", "reshape2"] + "version": "0.5.1", + "sha256": "00k9n3sbr6216zld4prl0v6mig472mhwca4ah8hr2s8q24v6ridx", + "depends": ["R6", "dplyr", "ggplot2", "ggpubr", "igraph", "magrittr", "microeco", "reshape2"] }, "mecor": { "name": "mecor", @@ -81437,7 +82229,7 @@ "name": "mecoturn", "version": "0.3.0", "sha256": "1qr7p50wplg3nwvaz595nxfrf5b1dc8l4y13jx65r8kvksqrl07g", - "depends": ["betareg", "ggplot2", "ggpubr", "glmmTMB", "GUniFrac", "lmerTest", "magrittr", "microeco", "R6"] + "depends": ["GUniFrac", "R6", "betareg", "ggplot2", "ggpubr", "glmmTMB", "lmerTest", "magrittr", "microeco"] }, "medExtractR": { "name": "medExtractR", @@ -81449,7 +82241,7 @@ "name": "medScan", "version": "1.0.2", "sha256": "17h97fnklci6prj62nzg49dcczns7s1yzi410jrdypsfhpz912kv", - "depends": ["fdrtool", "HDMT", "locfdr", "qqman", "qvalue"] + "depends": ["HDMT", "fdrtool", "locfdr", "qqman", "qvalue"] }, "mederrRank": { "name": "mederrRank", @@ -81459,21 +82251,21 @@ }, "medfate": { "name": "medfate", - "version": "4.3.1", - "sha256": "0gs47ms58s86nclz1p1b12xi34b4p3q5py7f5kda4pffpbd9msh0", - "depends": ["ggplot2", "meteoland", "Rcpp", "shiny"] + "version": "4.4.0", + "sha256": "19ljklfvzxvf3pxpx88r0im9f8kw261d6drhyj3njiv0ykxy19qq", + "depends": ["Rcpp", "ggplot2", "meteoland", "shiny"] }, "medfateland": { "name": "medfateland", - "version": "2.4.3", - "sha256": "0h24s5sg2nl83jqarb6m6sw5gi0d5x9284ysgl2p38637qrim55w", - "depends": ["cli", "dplyr", "ggplot2", "httr", "jsonlite", "lifecycle", "medfate", "meteoland", "Rcpp", "rlang", "sf", "shiny", "stars", "terra", "tibble", "tidyr", "tidyterra"] + "version": "2.4.5", + "sha256": "0rklmkq53c1xi8i89422c0jvfvhppr1a52f5xc87xzfh5z3jnhmk", + "depends": ["Rcpp", "cli", "dplyr", "ggplot2", "httr", "jsonlite", "lifecycle", "medfate", "meteoland", "rlang", "sf", "shiny", "stars", "terra", "tibble", "tidyr", "tidyterra"] }, "medflex": { "name": "medflex", "version": "0.6-10", "sha256": "0cybshbk2qvh38n9sc6qf9jwjhzs4zz31awx3bbyqfwzjgzai2dx", - "depends": ["boot", "car", "Matrix", "multcomp", "sandwich"] + "depends": ["Matrix", "boot", "car", "multcomp", "sandwich"] }, "mediacloudr": { "name": "mediacloudr", @@ -81491,7 +82283,7 @@ "name": "mediation", "version": "4.5.0", "sha256": "0i88wvqqw8cmxmh9i78rqzp4s16zhf12dgl9fsk9bhw7hxhhc0i1", - "depends": ["boot", "Hmisc", "lme4", "lpSolve", "MASS", "Matrix", "mvtnorm", "sandwich"] + "depends": ["Hmisc", "MASS", "Matrix", "boot", "lme4", "lpSolve", "mvtnorm", "sandwich"] }, "mediationsens": { "name": "mediationsens", @@ -81563,7 +82355,7 @@ "name": "meifly", "version": "0.3.1", "sha256": "0pgmxa4g16zhx3jx5g56h2s1f4cr4bkz3bp7404dm2729083rvjx", - "depends": ["leaps", "MASS", "plyr"] + "depends": ["MASS", "leaps", "plyr"] }, "mekko": { "name": "mekko", @@ -81575,31 +82367,31 @@ "name": "melt", "version": "1.11.4", "sha256": "19g5cd8fnvvqlvrvim47ra53svjk07cr4dmgn3h6x13wkv0grg46", - "depends": ["BH", "checkmate", "dqrng", "Rcpp", "RcppEigen"] + "depends": ["BH", "Rcpp", "RcppEigen", "checkmate", "dqrng"] }, "meltr": { "name": "meltr", "version": "1.0.2", "sha256": "1h2a09n0az9s81m9n4a0h3dckxxgb9vpj03kal29ms0zwn525xpx", - "depends": ["cli", "cpp11", "R6", "rlang", "tibble"] + "depends": ["R6", "cli", "cpp11", "rlang", "tibble"] }, "meltt": { "name": "meltt", "version": "0.4.3", "sha256": "1j2iz05xr9ddj9pk2yw7j7kjfr9rxmxkk123c6336fqdm14wvd21", - "depends": ["dplyr", "ggplot2", "leaflet", "plyr", "Rcpp", "RcppArmadillo", "reticulate", "shiny", "shinyjs", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "leaflet", "plyr", "reticulate", "shiny", "shinyjs", "tibble", "tidyr"] }, "mem": { "name": "mem", "version": "2.18", "sha256": "1jz2zadwm9gvlgfr1dvi8m6p3zm3bjz4n4apkbpj8g594ghcbrpx", - "depends": ["boot", "dplyr", "EnvStats", "ggplot2", "mclust", "purrr", "RColorBrewer", "RcppRoll", "sm", "tidyr"] + "depends": ["EnvStats", "RColorBrewer", "RcppRoll", "boot", "dplyr", "ggplot2", "mclust", "purrr", "sm", "tidyr"] }, "memapp": { "name": "memapp", "version": "2.16", "sha256": "0gjphzq2lr2qn7adjm6vvm50wqg6fhv0p28mcw2yjwiq8yrr0f3b", - "depends": ["dplyr", "DT", "formattable", "ggplot2", "mem", "plotly", "RColorBrewer", "shiny", "shinyBS", "shinydashboard", "shinyjs", "shinyWidgets", "stringi", "stringr", "tidyr"] + "depends": ["DT", "RColorBrewer", "dplyr", "formattable", "ggplot2", "mem", "plotly", "shiny", "shinyBS", "shinyWidgets", "shinydashboard", "shinyjs", "stringi", "stringr", "tidyr"] }, "meme": { "name": "meme", @@ -81629,7 +82421,7 @@ "name": "memisc", "version": "0.99.31.7", "sha256": "0drn923y8bwwwk2csa7l9b3fd06zfrfgi3b0pn7b23aja1c1h0xl", - "depends": ["data_table", "jsonlite", "lattice", "MASS", "yaml"] + "depends": ["MASS", "data_table", "jsonlite", "lattice", "yaml"] }, "memo": { "name": "memo", @@ -81641,7 +82433,7 @@ "name": "memochange", "version": "1.1.1", "sha256": "144134kpchb7ps8b2g7pyga5add0iqphzcwygf11aybmbzmp90x7", - "depends": ["forecast", "fracdiff", "longmemo", "LongMemoryTS", "sandwich", "strucchange", "urca"] + "depends": ["LongMemoryTS", "forecast", "fracdiff", "longmemo", "sandwich", "strucchange", "urca"] }, "memofunc": { "name": "memofunc", @@ -81671,7 +82463,7 @@ "name": "memoria", "version": "1.0.0", "sha256": "05nx6xkgf1mkn1ajjizwp66xhn7ddbvgdnmkdbcl4s7sq456vczw", - "depends": ["cowplot", "ggplot2", "HH", "ranger", "stringr", "tidyr", "viridis", "viridisLite", "zoo"] + "depends": ["HH", "cowplot", "ggplot2", "ranger", "stringr", "tidyr", "viridis", "viridisLite", "zoo"] }, "memuse": { "name": "memuse", @@ -81683,13 +82475,13 @@ "name": "merDeriv", "version": "0.2-4", "sha256": "1piswi4l7ri3251shmanhygipmsw8zg701jqd0am1s76kj16l9cc", - "depends": ["lavaan", "lme4", "Matrix", "nonnest2", "numDeriv", "sandwich"] + "depends": ["Matrix", "lavaan", "lme4", "nonnest2", "numDeriv", "sandwich"] }, "merTools": { "name": "merTools", "version": "0.6.2", "sha256": "0wxiflkqhl40rr6ibzk4c362m8jxd97jkskdxghqa45lc5vgn1qh", - "depends": ["abind", "arm", "blme", "broom_mixed", "dplyr", "foreach", "ggplot2", "lme4", "Matrix", "mvtnorm", "shiny"] + "depends": ["Matrix", "abind", "arm", "blme", "broom_mixed", "dplyr", "foreach", "ggplot2", "lme4", "mvtnorm", "shiny"] }, "mergeTrees": { "name": "mergeTrees", @@ -81699,15 +82491,21 @@ }, "mergen": { "name": "mergen", - "version": "0.1.0", - "sha256": "0nzgqsmbgk4472c64pr1qhmbhdk69qmicb5qni744crxlar92g5x", - "depends": ["assertthat", "BiocManager", "httr", "jsonlite", "openai", "rmarkdown"] + "version": "0.2.1", + "sha256": "0mrrqxjj0w2yw5q0g23wq4knpvv2hi4lhc9z7289id4n3xhw37xz", + "depends": ["BiocManager", "assertthat", "httr", "jsonlite", "openai", "rmarkdown"] + }, + "mergenstudio": { + "name": "mergenstudio", + "version": "1.0", + "sha256": "1s83h2xglmf21sg6brb67lcw3kch097vykmr3bpc6h8ljmr0qi27", + "depends": ["assertthat", "bslib", "cli", "colorspace", "fontawesome", "fs", "glue", "htmltools", "htmlwidgets", "httr2", "ids", "jsonlite", "magrittr", "mergen", "purrr", "rlang", "rmarkdown", "rstudioapi", "rvest", "shiny", "shinyFiles", "shiny_i18n", "shinyjs", "stringr", "waiter", "yaml"] }, "mergingTools": { "name": "mergingTools", "version": "1.0.1", "sha256": "04ryamfb19js6dq4iv2j0p2dlgrayl3zis2r1kic1wfvh4a46ihg", - "depends": ["dplyr", "MASS", "purrr", "rlang", "stringr", "tidyr"] + "depends": ["MASS", "dplyr", "purrr", "rlang", "stringr", "tidyr"] }, "merlin": { "name": "merlin", @@ -81725,7 +82523,7 @@ "name": "meshed", "version": "0.2.3", "sha256": "061q6b8603jbvlqkl6ddcmw1rgy53sqbxbsxhv218f7px392b1vf", - "depends": ["dplyr", "FNN", "glue", "magrittr", "Rcpp", "RcppArmadillo", "rlang"] + "depends": ["FNN", "Rcpp", "RcppArmadillo", "dplyr", "glue", "magrittr", "rlang"] }, "messaging": { "name": "messaging", @@ -81737,7 +82535,7 @@ "name": "messi", "version": "0.1.1", "sha256": "1z3fjxfmvxc9zr98zmkd84rj27iabjmw71hwqgnbjwcw5mnw2b5h", - "depends": ["ggplot2", "MASS", "patchwork", "progress"] + "depends": ["MASS", "ggplot2", "patchwork", "progress"] }, "messy_cats": { "name": "messy.cats", @@ -81755,7 +82553,7 @@ "name": "metR", "version": "0.15.0", "sha256": "17qhx6jx8h9dxfzxgg4nx3nx4xjnjpz9r0cix0qqbgngri55lap0", - "depends": ["checkmate", "data_table", "digest", "Formula", "formula_tools", "ggplot2", "gtable", "isoband", "lubridate", "memoise", "plyr", "purrr", "scales", "sf", "stringr"] + "depends": ["Formula", "checkmate", "data_table", "digest", "formula_tools", "ggplot2", "gtable", "isoband", "lubridate", "memoise", "plyr", "purrr", "scales", "sf", "stringr"] }, "metRology": { "name": "metRology", @@ -81791,12 +82589,12 @@ "name": "metaBMA", "version": "0.6.9", "sha256": "1y05c8mgim7v2991r1hr3ahx0mjji6gmp9mz25f0csl69kf3zr61", - "depends": ["BH", "bridgesampling", "coda", "LaplacesDemon", "logspline", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "LaplacesDemon", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bridgesampling", "coda", "logspline", "mvtnorm", "rstan", "rstantools"] }, "metaCluster": { "name": "metaCluster", - "version": "0.1.0", - "sha256": "1n69vlxzfx937p587jb3q2hn6b59wzx20p09hsbbjwb4nj83hda7", + "version": "0.1.1", + "sha256": "0mirhkj37cmjy82yppx097ivy2lsvhyagirdbvdmr9mx4clmva9g", "depends": ["Biostrings", "cluster", "dbscan", "dplyr", "factoextra", "seqinr"] }, "metaConvert": { @@ -81819,9 +82617,15 @@ }, "metaGE": { "name": "metaGE", - "version": "1.0.3", - "sha256": "0w639hxildzcd2kwjs9r3iykccd8qhxpiarj95zpd89fzkkqzknx", - "depends": ["corrplot", "data_table", "dplyr", "emdbook", "future", "ggplot2", "ggrepel", "gplots", "ks", "purrr", "qqman", "Rfast", "stringr", "tibble", "tidyr", "viridis"] + "version": "1.1.0", + "sha256": "01507d85fpiqrbir1rjy5vczrv9cjfscwbl3746rr8x1x8danz7w", + "depends": ["Rfast", "corrplot", "data_table", "dplyr", "emdbook", "future", "ggplot2", "ggrepel", "gplots", "ks", "purrr", "qqman", "stringr", "tibble", "tidyr", "viridis", "yarrr"] + }, + "metaHelper": { + "name": "metaHelper", + "version": "1.0.0", + "sha256": "0nsrsaklxbr4clg3ka8rrpp162bl9qcxkffqkmdz5ha4dfs028vm", + "depends": ["confintr", "magrittr"] }, "metaLik": { "name": "metaLik", @@ -81833,7 +82637,7 @@ "name": "metaMA", "version": "3.1.3", "sha256": "13imp5d1ggw4qc7win4d2nvwvl92s9visb6bjm09h69lp18h631s", - "depends": ["limma", "SMVar"] + "depends": ["SMVar", "limma"] }, "metaRNASeq": { "name": "metaRNASeq", @@ -81845,7 +82649,7 @@ "name": "metaRange", "version": "1.1.4", "sha256": "05x7rs4ah42326xmpm4spm2ysmlw2c6cs1fxgngy9ndz6k2dmb64", - "depends": ["checkmate", "R6", "Rcpp", "RcppArmadillo", "terra"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "checkmate", "terra"] }, "metaSDTreg": { "name": "metaSDTreg", @@ -81857,7 +82661,7 @@ "name": "metaSEM", "version": "1.4.0", "sha256": "1gkgcczdm14cz2z4ys9qxy068g1ma6sik5ycas3z6m5rgwbd2amy", - "depends": ["ellipse", "lavaan", "MASS", "Matrix", "mvtnorm", "numDeriv", "OpenMx"] + "depends": ["MASS", "Matrix", "OpenMx", "ellipse", "lavaan", "mvtnorm", "numDeriv"] }, "metaSurvival": { "name": "metaSurvival", @@ -81893,13 +82697,13 @@ "name": "metacart", "version": "2.0-3", "sha256": "1wim72fvhx6cyc16c9gl8cwzbhlpzilk7q8gi4jnzzazqmc1kb5n", - "depends": ["ggplot2", "gridExtra", "Rcpp", "rpart"] + "depends": ["Rcpp", "ggplot2", "gridExtra", "rpart"] }, "metacoder": { "name": "metacoder", "version": "0.3.7", "sha256": "0f7y7yzkqblqal71lp2kip8lzismdzlj3cpw0mb15hvca9dz12x4", - "depends": ["ape", "cowplot", "crayon", "dplyr", "GA", "ggfittext", "ggplot2", "igraph", "lazyeval", "magrittr", "R6", "Rcpp", "RCurl", "readr", "rlang", "seqinr", "stringr", "taxize", "tibble", "vegan"] + "depends": ["GA", "R6", "RCurl", "Rcpp", "ape", "cowplot", "crayon", "dplyr", "ggfittext", "ggplot2", "igraph", "lazyeval", "magrittr", "readr", "rlang", "seqinr", "stringr", "taxize", "tibble", "vegan"] }, "metacom": { "name": "metacom", @@ -81917,7 +82721,7 @@ "name": "metacore", "version": "0.1.3", "sha256": "06ba9p1by6hfagj0s43b6dwwfci5fczl2fr7kw3cchqsr90y3vfr", - "depends": ["dplyr", "magrittr", "purrr", "R6", "readxl", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "xml2"] + "depends": ["R6", "dplyr", "magrittr", "purrr", "readxl", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "xml2"] }, "metadat": { "name": "metadat", @@ -81925,6 +82729,12 @@ "sha256": "1f7mb3pw5d0akr09jjva06ay223izhpzbr21bapnw99x1kiybk7h", "depends": ["mathjaxr"] }, + "metadeconfoundR": { + "name": "metadeconfoundR", + "version": "1.0.2", + "sha256": "0n6vcr7yv7hlwfl4rijg0287n43qch24hdb9fzz1x2a6x1hm019d", + "depends": ["detectseparation", "doParallel", "foreach", "futile_logger", "ggplot2", "lme4", "lmtest", "reshape2", "rlang"] + }, "metadynminer": { "name": "metadynminer", "version": "0.1.7", @@ -81935,19 +82745,19 @@ "name": "metadynminer3d", "version": "0.0.2", "sha256": "1y1csfp57qrv394hj96yr5v3brxw7v0a07k2pg7ypw08gshvgqjm", - "depends": ["metadynminer", "misc3d", "Rcpp", "rgl"] + "depends": ["Rcpp", "metadynminer", "misc3d", "rgl"] }, "metafolio": { "name": "metafolio", "version": "0.1.2", "sha256": "11y2igvwwkr4dj7v8ip66w1psi9wzb8q3sy018lhaxb42s1lspbh", - "depends": ["colorspace", "MASS", "plyr", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "colorspace", "plyr"] }, "metafor": { "name": "metafor", "version": "4.6-0", "sha256": "0rl6w4j1fqvr7vn0dbzmir28xbi2wdn9m3lrxwjvvf47pp1lqd07", - "depends": ["mathjaxr", "Matrix", "metadat", "nlme", "numDeriv", "pbapply"] + "depends": ["Matrix", "mathjaxr", "metadat", "nlme", "numDeriv", "pbapply"] }, "metaforest": { "name": "metaforest", @@ -81959,7 +82769,7 @@ "name": "metafuse", "version": "2.0-1", "sha256": "1zdw22f5kzvy2xr3c2csy873hcags60as567brc2sw17d0apfy8j", - "depends": ["evd", "glmnet", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "evd", "glmnet"] }, "metagam": { "name": "metagam", @@ -81993,9 +82803,9 @@ }, "metajam": { "name": "metajam", - "version": "0.2.3", - "sha256": "0ryzsnwfhapsyz40ckjj6gn2chf37m62z3l7xv703878bghpdqwc", - "depends": ["dataone", "dplyr", "EML", "emld", "lubridate", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr"] + "version": "0.3.1", + "sha256": "1sqxybxzi198a6b1za33xyb42ii3v8d5p5bx6i393r9qkniry69s", + "depends": ["EML", "XML", "dataone", "dplyr", "emld", "lubridate", "purrr", "readr", "stringr", "tibble", "tidyr"] }, "metalite": { "name": "metalite", @@ -82019,7 +82829,7 @@ "name": "metamedian", "version": "1.1.1", "sha256": "17p8npnaddsdikii9c8zhvbwhkpwgncksipzsslrs7d4pz6wlfvf", - "depends": ["estmeansd", "Hmisc", "metaBLUE", "metafor"] + "depends": ["Hmisc", "estmeansd", "metaBLUE", "metafor"] }, "metamer": { "name": "metamer", @@ -82037,19 +82847,19 @@ "name": "metamisc", "version": "0.4.0", "sha256": "12ydvkpni7a7v0x8lfknsy4c6hmgjqri3l33m4fwsai3rhnq6hsa", - "depends": ["dplyr", "ggplot2", "lme4", "metafor", "mvtnorm", "plyr", "pROC"] + "depends": ["dplyr", "ggplot2", "lme4", "metafor", "mvtnorm", "pROC", "plyr"] }, "metan": { "name": "metan", "version": "1.18.0", "sha256": "0m7czvd7djv80c6kly8ckgs9m5ld0rqnd92y76n181d2xk9l6ypc", - "depends": ["dplyr", "GGally", "ggforce", "ggplot2", "ggrepel", "lme4", "lmerTest", "magrittr", "mathjaxr", "patchwork", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["GGally", "dplyr", "ggforce", "ggplot2", "ggrepel", "lme4", "lmerTest", "magrittr", "mathjaxr", "patchwork", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "metanetwork": { "name": "metanetwork", "version": "0.7.0", "sha256": "0rlnalmfmiih154zq6rk4sq12y7nr8fn1ws8mrlryy04gznz6igw", - "depends": ["dplyr", "GGally", "ggimage", "ggplot2", "igraph", "intergraph", "magrittr", "Matrix", "network", "RColorBrewer", "rlang", "sna", "visNetwork"] + "depends": ["GGally", "Matrix", "RColorBrewer", "dplyr", "ggimage", "ggplot2", "igraph", "intergraph", "magrittr", "network", "rlang", "sna", "visNetwork"] }, "metansue": { "name": "metansue", @@ -82059,15 +82869,15 @@ }, "metap": { "name": "metap", - "version": "1.10", - "sha256": "18l86026g5g0pdihw41h7yck1ad5k43bb7as5qih2k5xkr680mzx", - "depends": ["lattice", "mathjaxr", "mutoss", "qqconf", "Rdpack", "TFisher"] + "version": "1.11", + "sha256": "1dwk402kbxigz5llh223z0b98cq2vs3ij049fgsj7bna7kycks1l", + "depends": ["Rdpack", "TFisher", "lattice", "mathjaxr", "mutoss", "qqconf"] }, "metapack": { "name": "metapack", "version": "0.3", "sha256": "17j3xivpyq17is5vzmca9zck6dryzfnrzddvppik4ml3xq122br9", - "depends": ["BH", "Formula", "ggplot2", "gridExtra", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["BH", "Formula", "Rcpp", "RcppArmadillo", "RcppProgress", "ggplot2", "gridExtra"] }, "metaplot": { "name": "metaplot", @@ -82077,9 +82887,9 @@ }, "metaplus": { "name": "metaplus", - "version": "1.0-4", - "sha256": "1lrlw5h3fgcrp0cdawxala36m8mpljbmp20fhf4sc0qj51h2ccs4", - "depends": ["bbmle", "boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "lme4", "MASS", "metafor", "numDeriv", "Rfast"] + "version": "1.0-5", + "sha256": "0cknvgnkvqdw00600akpxrrdbg7h0sdyv15vmhs9dsfdf1ag6z51", + "depends": ["MASS", "Rfast", "bbmle", "boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "lme4", "metafor", "numDeriv"] }, "metapost": { "name": "metapost", @@ -82131,8 +82941,8 @@ }, "metatools": { "name": "metatools", - "version": "0.1.5", - "sha256": "0lcpq0k73kcr7fr8i7dyi785mapvyd6slz93r4spd7z8bg71nm25", + "version": "0.1.6", + "sha256": "09rr7hfzkwk2ddc9cs9x8yvqbizk0bxfflkn9vdlf1b9kvrpknh9", "depends": ["dplyr", "magrittr", "metacore", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "metaumbrella": { @@ -82151,7 +82961,7 @@ "name": "metaviz", "version": "0.3.1", "sha256": "0jvv49rw66v7saj2y1q88rp6fyzq7473af5d3k77ymvjbpqyrbyz", - "depends": ["dplyr", "ggplot2", "ggpubr", "gridExtra", "metafor", "nullabor", "RColorBrewer"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggpubr", "gridExtra", "metafor", "nullabor"] }, "metawho": { "name": "metawho", @@ -82169,7 +82979,7 @@ "name": "meteo", "version": "2.0-3", "sha256": "1l3656yh0ggjd7kyvkknn6a6ad1z45qpxrndgkp52cph2607n324", - "depends": ["caret", "CAST", "data_table", "DescTools", "doParallel", "dplyr", "foreach", "gstat", "jsonlite", "nabor", "plyr", "ranger", "raster", "sf", "sftime", "snowfall", "sp", "spacetime", "terra", "units"] + "depends": ["CAST", "DescTools", "caret", "data_table", "doParallel", "dplyr", "foreach", "gstat", "jsonlite", "nabor", "plyr", "ranger", "raster", "sf", "sftime", "snowfall", "sp", "spacetime", "terra", "units"] }, "meteoEVT": { "name": "meteoEVT", @@ -82181,13 +82991,13 @@ "name": "meteoForecast", "version": "0.56", "sha256": "0nbjl4x06ni6jk8ji6n3cgd07iszw87lwg52rp8avvsz3kh19p5c", - "depends": ["ncdf4", "raster", "sp", "XML", "zoo"] + "depends": ["XML", "ncdf4", "raster", "sp", "zoo"] }, "meteoland": { "name": "meteoland", "version": "2.2.1", "sha256": "1543ka7yd7v1yca7my1114mb5j6wmn7dsj3kcr7gj8z99v8mxadk", - "depends": ["assertthat", "cli", "cubelyr", "dplyr", "lifecycle", "lubridate", "ncdfgeom", "ncmeta", "purrr", "Rcpp", "rlang", "sf", "stars", "tidyr", "units"] + "depends": ["Rcpp", "assertthat", "cli", "cubelyr", "dplyr", "lifecycle", "lubridate", "ncdfgeom", "ncmeta", "purrr", "rlang", "sf", "stars", "tidyr", "units"] }, "meteor": { "name": "meteor", @@ -82199,7 +83009,7 @@ "name": "meteorits", "version": "0.1.1", "sha256": "1vk8pbhfc5mbkbpw7ml81gx9i8187xp3vx36pbyyhjbrpy6gqabx", - "depends": ["MASS", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "pracma"] }, "meteospain": { "name": "meteospain", @@ -82227,9 +83037,9 @@ }, "metrica": { "name": "metrica", - "version": "2.0.3", - "sha256": "10pkd29vcrm74fxf4i5bmkrj6528vfzipf53nfdpic9bavk2s2i7", - "depends": ["DBI", "dplyr", "energy", "ggplot2", "ggpp", "minerva", "rlang", "RSQLite", "tidyr"] + "version": "2.1.0", + "sha256": "1hb7m0adz3a31c0rqjfpz8lincsclcpn02jhn0idpbppp86h6pck", + "depends": ["DBI", "RSQLite", "dplyr", "energy", "ggplot2", "ggpp", "minerva", "rlang", "tidyr"] }, "metricminer": { "name": "metricminer", @@ -82259,7 +83069,7 @@ "name": "mets", "version": "1.3.4", "sha256": "0yisa6v0apxxw5ycjhc3hcghlmvzzaq431z8nzsrw5jc2g13c0ca", - "depends": ["lava", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo", "survival", "timereg"] + "depends": ["Rcpp", "RcppArmadillo", "lava", "mvtnorm", "numDeriv", "survival", "timereg"] }, "metsyn": { "name": "metsyn", @@ -82269,15 +83079,15 @@ }, "mev": { "name": "mev", - "version": "1.16", - "sha256": "0kavj6mzzsjxkac2q0fxyhnzwy51pwld4r77fg024ggliiswjmms", - "depends": ["alabama", "nleqslv", "Rcpp", "RcppArmadillo", "Rsolnp"] + "version": "1.17", + "sha256": "0gzi48kwp6hb9p28km43kf76r55cbqgmjkfn8nylhkah7zx1gvxc", + "depends": ["Rcpp", "RcppArmadillo", "Rsolnp", "alabama", "nleqslv"] }, "mevr": { "name": "mevr", - "version": "1.0.0", - "sha256": "0klhmlhn2v4ncsrwvpzhxxn8bbrjn5qjzi6rlxrxmp9yfk5wnxhy", - "depends": ["bamlss", "doParallel", "dplyr", "EnvStats", "foreach", "mgcv", "rlang"] + "version": "1.1.1", + "sha256": "107gp0lbgy4hfi38x07h4z8sf1phkywqk58hfr2d97dil4mnwlz0", + "depends": ["EnvStats", "bamlss", "doParallel", "dplyr", "foreach", "mgcv", "rlang"] }, "mewAvg": { "name": "mewAvg", @@ -82287,9 +83097,9 @@ }, "mexhaz": { "name": "mexhaz", - "version": "2.5", - "sha256": "0lpymgfknr8szpxf7g7qmvdklsclfsmvjjws7cdpxsiv6hv8y3p2", - "depends": ["lamW", "MASS", "numDeriv", "statmod", "survival"] + "version": "2.6", + "sha256": "160ilpb6zydjpj82nhbh0wha71cmmvyw7wmhqfvj3jbli22vyn8q", + "depends": ["MASS", "lamW", "numDeriv", "statmod", "survival"] }, "mexicolors": { "name": "mexicolors", @@ -82301,19 +83111,19 @@ "name": "mfGARCH", "version": "0.2.1", "sha256": "1pcabijwhdxhdlrdjvi2zl8la939igsdy3j1yv0ic8wvkpw1sh4x", - "depends": ["maxLik", "numDeriv", "Rcpp", "zoo"] + "depends": ["Rcpp", "maxLik", "numDeriv", "zoo"] }, "mfaces": { "name": "mfaces", "version": "0.1-4", "sha256": "0svvnpka2y1p21gvdyc7csw6m0g3kziszw2ll9bq5gpcnl69qk4n", - "depends": ["face", "Matrix", "matrixcalc", "mgcv"] + "depends": ["Matrix", "face", "matrixcalc", "mgcv"] }, "mfdb": { "name": "mfdb", "version": "7.3-1", "sha256": "1l7bvacmvh53rq91jqdb6zqjn3974sy838zfvgfb6nam54r080y4", - "depends": ["DBI", "duckdb", "getPass", "logging", "rlang", "RPostgres", "RSQLite"] + "depends": ["DBI", "RPostgres", "RSQLite", "duckdb", "getPass", "logging", "rlang"] }, "mfp": { "name": "mfp", @@ -82331,13 +83141,13 @@ "name": "mfpp", "version": "0.0.7", "sha256": "1z250grk06cmclyz4v3qnxdy43dm5vcrcq1rglpps3cfrg09i2g1", - "depends": ["genalg", "ggplot2", "igraph", "nsga2R", "pracma", "reshape2", "Rfast"] + "depends": ["Rfast", "genalg", "ggplot2", "igraph", "nsga2R", "pracma", "reshape2"] }, "mfx": { "name": "mfx", "version": "1.2-2", "sha256": "04pwp67i4sn4rf497pgy6qifwvrcmwyxn8x5sn96fy8qyrdzjfhj", - "depends": ["betareg", "lmtest", "MASS", "sandwich"] + "depends": ["MASS", "betareg", "lmtest", "sandwich"] }, "mgarchBEKK": { "name": "mgarchBEKK", @@ -82349,13 +83159,13 @@ "name": "mgc", "version": "2.0.2", "sha256": "1l9qs4nz1rn56qp569nh26yz3c7i4zh3r43c209zh7kvizpagx0i", - "depends": ["abind", "boot", "energy", "MASS", "raster"] + "depends": ["MASS", "abind", "boot", "energy", "raster"] }, "mgcViz": { "name": "mgcViz", "version": "0.1.11", "sha256": "14n9l10rcr9nar71lyw1qmk9xar2zixcx4s9rdnz5dr4jr7330y3", - "depends": ["gamm4", "GGally", "ggplot2", "gridExtra", "KernSmooth", "matrixStats", "mgcv", "miniUI", "plyr", "qgam", "shiny", "viridis"] + "depends": ["GGally", "KernSmooth", "gamm4", "ggplot2", "gridExtra", "matrixStats", "mgcv", "miniUI", "plyr", "qgam", "shiny", "viridis"] }, "mgcv": { "name": "mgcv", @@ -82367,19 +83177,25 @@ "name": "mgee2", "version": "0.5", "sha256": "0p4601z2dyg2yjyjdcl0ry7fda89rjl6kilk8977z8p4n7d1kynj", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "mggd": { "name": "mggd", - "version": "1.2.3", - "sha256": "0zh3af2qqlz59nkqip2kwn51zcfy7kk45cyz6952vg276cv0a5hd", - "depends": ["lifecycle", "MASS", "rgl"] + "version": "1.3.1", + "sha256": "07ajrhbsxr608688qppg6p2q7i3bh67fr6q9hvl9cs12av4bdznq", + "depends": ["MASS", "data_table", "lifecycle", "rgl"] + }, + "mgi_report_reader": { + "name": "mgi.report.reader", + "version": "0.1.3", + "sha256": "0r0s8ji2mdi9hkls7ly645sa06hmcl903v9ys6cxzadbiprwnbnv", + "depends": ["data_table", "dplyr", "httr2", "memoise", "rlang", "stringr", "tibble", "vroom"] }, "mglasso": { "name": "mglasso", "version": "0.1.2", "sha256": "1896fg1gdgah8vmikz2br6v0rslhhh2frffkjiy6fnw4qxa5zsv9", - "depends": ["corpcor", "ggplot2", "ggrepel", "gridExtra", "Matrix", "R_utils", "reticulate", "rstudioapi"] + "depends": ["Matrix", "R_utils", "corpcor", "ggplot2", "ggrepel", "gridExtra", "reticulate", "rstudioapi"] }, "mglmn": { "name": "mglmn", @@ -82391,7 +83207,7 @@ "name": "mgm", "version": "1.2-14", "sha256": "1j5hvf168vzanhc5ck5rxz5arjq3b0gs552kf3l1f8kqdmd8kpzw", - "depends": ["glmnet", "gtools", "Hmisc", "qgraph", "stringr"] + "depends": ["Hmisc", "glmnet", "gtools", "qgraph", "stringr"] }, "mgpStreamingSDK": { "name": "mgpStreamingSDK", @@ -82403,7 +83219,7 @@ "name": "mgss", "version": "1.2", "sha256": "0czzr5hc9sr8yc362q9xag3vphwk1gfahczpya2mh1l6fsa74fbn", - "depends": ["combinat", "Matrix", "Rcpp", "statmod"] + "depends": ["Matrix", "Rcpp", "combinat", "statmod"] }, "mgsub": { "name": "mgsub", @@ -82427,13 +83243,13 @@ "name": "mgwrsar", "version": "1.0.5", "sha256": "0xhxx1x625igm54n5wpl4aavcqg9dx9nmazr330538p334df3z8h", - "depends": ["caret", "doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "htmltools", "knitr", "leaflet", "mapview", "Matrix", "mboost", "mgcv", "microbenchmark", "nabor", "Rcpp", "RcppEigen", "rlang", "sf", "sp", "spgwr"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "caret", "doParallel", "dplyr", "foreach", "ggplot2", "gridExtra", "htmltools", "knitr", "leaflet", "mapview", "mboost", "mgcv", "microbenchmark", "nabor", "rlang", "sf", "sp", "spgwr"] }, "mhazard": { "name": "mhazard", "version": "0.2.3", "sha256": "030r0l11qplmypwfk45mj31gba96xda7nxzgiyjsgrb20jmcsja5", - "depends": ["boot", "plot3D", "Rcpp", "RcppArmadillo", "rootSolve", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "boot", "plot3D", "rootSolve", "survival"] }, "mhcnuggetsr": { "name": "mhcnuggetsr", @@ -82453,11 +83269,17 @@ "sha256": "1z0p8ny9lpnrshgas7cad2lv7j0blw0n6ihiimw600n70h73jwrn", "depends": ["ggplot2", "reshape2"] }, + "mhurdle": { + "name": "mhurdle", + "version": "1.3-1", + "sha256": "0dlajmfwd0bz3npa7zy66pa5hxs08l89axnc77mp8q67mp6xwa7y", + "depends": ["CompQuadForm", "Formula", "Rdpack", "generics", "margins", "maxLik", "nonnest2", "numDeriv", "prediction", "sandwich", "survival", "truncreg"] + }, "mi": { "name": "mi", "version": "1.1", "sha256": "11f75ivnax6p48mp2pasprws488cm2daym87sw2mcrywvf89fyjd", - "depends": ["arm", "Matrix"] + "depends": ["Matrix", "arm"] }, "mi4p": { "name": "mi4p", @@ -82469,7 +83291,7 @@ "name": "miCoPTCM", "version": "1.1", "sha256": "0bmb06rb53fq8ylcvz693akmz7nkjj50c6ypxsjbfp4crllpi5v9", - "depends": ["distr", "MASS", "nleqslv", "survival"] + "depends": ["MASS", "distr", "nleqslv", "survival"] }, "miLAG": { "name": "miLAG", @@ -82481,13 +83303,13 @@ "name": "miLineage", "version": "2.1", "sha256": "0660vk44ywmj0q2cw7pa2z1r039ncw693dnz7zlgc0ipwak3b0ry", - "depends": ["data_table", "geepack", "MASS"] + "depends": ["MASS", "data_table", "geepack"] }, "miRNAss": { "name": "miRNAss", "version": "1.5", "sha256": "0j4yvd0j7r98m2msllszlzkzrx67a2z4xpx00zpq90hbr5jykxc4", - "depends": ["CORElearn", "Matrix", "Rcpp", "RSpectra"] + "depends": ["CORElearn", "Matrix", "RSpectra", "Rcpp"] }, "miRecSurv": { "name": "miRecSurv", @@ -82505,13 +83327,13 @@ "name": "miRtest", "version": "2.1", "sha256": "1qgyldf3yhny8dmix6drisrrn64s5h58yvmk5pch6irdddq3i053", - "depends": ["corpcor", "GlobalAncova", "globaltest", "limma", "MASS"] + "depends": ["GlobalAncova", "MASS", "corpcor", "globaltest", "limma"] }, "miWQS": { "name": "miWQS", "version": "0.4.4", "sha256": "0fmcc86hiz89kdynkzppp9z0srgh4gl8327szivjxadxip4zm21i", - "depends": ["coda", "condMVNorm", "ggplot2", "glm2", "Hmisc", "invgamma", "MASS", "matrixNormal", "MCMCpack", "mvtnorm", "purrr", "rlist", "Rsolnp", "survival", "tidyr", "tmvmixnorm", "tmvtnorm", "truncnorm"] + "depends": ["Hmisc", "MASS", "MCMCpack", "Rsolnp", "coda", "condMVNorm", "ggplot2", "glm2", "invgamma", "matrixNormal", "mvtnorm", "purrr", "rlist", "survival", "tidyr", "tmvmixnorm", "tmvtnorm", "truncnorm"] }, "micEcon": { "name": "micEcon", @@ -82529,7 +83351,7 @@ "name": "micEconCES", "version": "1.0-2", "sha256": "039hv274xbs3syw0nxgkvxgfyn594fpcrlgmfwd2mfv6y78hc796", - "depends": ["car", "DEoptim", "micEcon", "minpack_lm", "miscTools", "systemfit"] + "depends": ["DEoptim", "car", "micEcon", "minpack_lm", "miscTools", "systemfit"] }, "micEconDistRay": { "name": "micEconDistRay", @@ -82559,31 +83381,31 @@ "name": "micd", "version": "1.1.1", "sha256": "0scihw884m8cj3c8kg2g83w36wks44s3s7nfbhifqc89nv5q0p8a", - "depends": ["mice", "pcalg", "RBGL", "Rfast"] + "depends": ["RBGL", "Rfast", "mice", "pcalg"] }, "mice": { "name": "mice", "version": "3.16.0", "sha256": "0h20lirk2257y3i1ww5y2pqp9lc21ilmf8yykmz36h55hm8jiw19", - "depends": ["broom", "cpp11", "dplyr", "generics", "glmnet", "lattice", "mitml", "nnet", "Rcpp", "rlang", "rpart", "tidyr"] + "depends": ["Rcpp", "broom", "cpp11", "dplyr", "generics", "glmnet", "lattice", "mitml", "nnet", "rlang", "rpart", "tidyr"] }, "miceFast": { "name": "miceFast", "version": "0.8.2", "sha256": "0n4hi9f28mzc9h41g7y3nnkr5lq7npafk6ias17xsqw28agc95ir", - "depends": ["data_table", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table"] }, "miceRanger": { "name": "miceRanger", "version": "1.5.0", "sha256": "0xm8fcvjf6pcfyyk1gnwfdac44q6b33i5byja9lqxy7vygbxmgxd", - "depends": ["corrplot", "crayon", "data_table", "DescTools", "FNN", "foreach", "ggplot2", "ggpubr", "ranger"] + "depends": ["DescTools", "FNN", "corrplot", "crayon", "data_table", "foreach", "ggplot2", "ggpubr", "ranger"] }, "miceadds": { "name": "miceadds", "version": "3.17-44", "sha256": "0r91rjl44sxdwfdb0z10hnjq7yfiqlcwfm6aa0a7lm1vmk8rvxkf", - "depends": ["mice", "mitools", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mice", "mitools"] }, "miceafter": { "name": "miceafter", @@ -82595,7 +83417,7 @@ "name": "micemd", "version": "1.10.0", "sha256": "1rzn4iiv9zml6c0d5j36c4z1kdn03j05m4q03wca7z0k35icsis6", - "depends": ["abind", "digest", "GJRM", "jomo", "lme4", "MASS", "Matrix", "mgcv", "mice", "mixmeta", "mvmeta", "mvtnorm", "nlme", "pbivnorm"] + "depends": ["GJRM", "MASS", "Matrix", "abind", "digest", "jomo", "lme4", "mgcv", "mice", "mixmeta", "mvmeta", "mvtnorm", "nlme", "pbivnorm"] }, "michelRodange": { "name": "michelRodange", @@ -82643,13 +83465,13 @@ "name": "microbial", "version": "0.0.21", "sha256": "1d2sr4wwjlxcaxqr57gzf8m2pydgx4kp3h8mgyxzcm4s00i8m5bc", - "depends": ["broom", "DESeq2", "dplyr", "edgeR", "ggplot2", "ggpubr", "magrittr", "phangorn", "phyloseq", "plyr", "randomForest", "rlang", "rstatix", "S4Vectors", "SummarizedExperiment", "tidyr", "vegan"] + "depends": ["DESeq2", "S4Vectors", "SummarizedExperiment", "broom", "dplyr", "edgeR", "ggplot2", "ggpubr", "magrittr", "phangorn", "phyloseq", "plyr", "randomForest", "rlang", "rstatix", "tidyr", "vegan"] }, "microclass": { "name": "microclass", "version": "1.2", "sha256": "0q6mn1hbi6nk29x2x5a1wcdqp06mjggbrpglk5i8pp4gkqlzhl8q", - "depends": ["dplyr", "microcontax", "microseq", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "stringr", "tibble"] + "depends": ["Rcpp", "RcppEigen", "RcppParallel", "dplyr", "microcontax", "microseq", "rlang", "stringr", "tibble"] }, "microcontax": { "name": "microcontax", @@ -82665,27 +83487,27 @@ }, "microeco": { "name": "microeco", - "version": "1.7.1", - "sha256": "1w01k7vd1s5w3xkjxkz5gwbql92k3r2nvxzhxhbpkj9amz1rb5wl", - "depends": ["ape", "data_table", "dplyr", "ggplot2", "igraph", "magrittr", "R6", "RColorBrewer", "reshape2", "rlang", "scales", "tibble", "vegan"] + "version": "1.9.0", + "sha256": "0hk1mria8r0jqq8q0qxhpq42j9cna64ip4z056jda8n7l9jympsf", + "depends": ["R6", "RColorBrewer", "ape", "data_table", "dplyr", "ggplot2", "igraph", "magrittr", "reshape2", "rlang", "scales", "tibble", "vegan"] }, "microhaplot": { "name": "microhaplot", "version": "1.0.1", "sha256": "0g15g7d19yz11nn2g0h8h2m8k1cvmpryz72pnalgv5yi58md5l5i", - "depends": ["dplyr", "DT", "ggiraph", "ggplot2", "gtools", "magrittr", "scales", "shiny", "shinyBS", "shinyWidgets", "tidyr"] + "depends": ["DT", "dplyr", "ggiraph", "ggplot2", "gtools", "magrittr", "scales", "shiny", "shinyBS", "shinyWidgets", "tidyr"] }, "micromap": { "name": "micromap", "version": "1.9.8", "sha256": "129q0a6jywxmhgddyacjl150zfxr04qdv17pqngp4xl0rd9r5zcz", - "depends": ["ggplot2", "RColorBrewer", "sf", "sp"] + "depends": ["RColorBrewer", "ggplot2", "sf", "sp"] }, "micromapST": { "name": "micromapST", "version": "3.0.3", "sha256": "0zg0wgqlk9z9k3qhcnd8y8swa7p3g8q30fvw3g0n71dd4vqxzdcl", - "depends": ["labeling", "RColorBrewer", "readxl", "rmapshaper", "sf", "spdep", "stringr", "writexl"] + "depends": ["RColorBrewer", "labeling", "readxl", "rmapshaper", "sf", "spdep", "stringr", "writexl"] }, "micromodal": { "name": "micromodal", @@ -82709,19 +83531,19 @@ "name": "microplot", "version": "1.0-45", "sha256": "0qprvn5zv9ai30lhd8qykffc5f8va886kc5qka34940lin63v389", - "depends": ["cowplot", "flextable", "ggplot2", "HH", "Hmisc", "htmltools", "lattice", "officer"] + "depends": ["HH", "Hmisc", "cowplot", "flextable", "ggplot2", "htmltools", "lattice", "officer"] }, "microseq": { "name": "microseq", "version": "2.1.6", "sha256": "1xa8r908jic06kv1qjmdidh3zzslbimjyhsy6v27xqzrh45svq4c", - "depends": ["data_table", "dplyr", "Rcpp", "rlang", "stringr", "tibble"] + "depends": ["Rcpp", "data_table", "dplyr", "rlang", "stringr", "tibble"] }, "microsimulation": { "name": "microsimulation", "version": "1.4.3", "sha256": "0vn7lx6qa0dqd7h208s36jwcxswmnhdp4kazkavagd61sqr2gah2", - "depends": ["ascii", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "ascii", "survival"] }, "microsynth": { "name": "microsynth", @@ -82733,7 +83555,7 @@ "name": "micsr", "version": "0.1-1", "sha256": "1rjny19h7h2zj2c186dws557h4yy0pcsr14dsbg25nmxplsbz0ml", - "depends": ["dplyr", "Formula", "generics", "ggplot2", "knitr", "magrittr", "purrr", "Rdpack", "rlang", "sandwich", "tibble", "tidyr", "tidyselect"] + "depends": ["Formula", "Rdpack", "dplyr", "generics", "ggplot2", "knitr", "magrittr", "purrr", "rlang", "sandwich", "tibble", "tidyr", "tidyselect"] }, "micss": { "name": "micss", @@ -82751,19 +83573,19 @@ "name": "midas2", "version": "1.1.0", "sha256": "0in4z1ijj9ymr27c9l5a9jripzb9k0nxk231bmk3sk3b3s7755vb", - "depends": ["coda", "MCMCpack", "R2jags"] + "depends": ["MCMCpack", "R2jags", "coda"] }, "midasml": { "name": "midasml", "version": "0.1.10", "sha256": "0jhrifvqcis2lj59vybgkzgmdmxwfqmsbxijwcz8hsprshr69xl9", - "depends": ["doParallel", "doRNG", "foreach", "lubridate", "Matrix", "randtoolbox", "snow"] + "depends": ["Matrix", "doParallel", "doRNG", "foreach", "lubridate", "randtoolbox", "snow"] }, "midasr": { "name": "midasr", "version": "0.8", "sha256": "0mzyxf8q2wmbsiczkhhgigy7jmi8zr4w4a83f97va35vfhxi217k", - "depends": ["forecast", "Formula", "MASS", "Matrix", "numDeriv", "optimx", "quantreg", "sandwich", "texreg", "zoo"] + "depends": ["Formula", "MASS", "Matrix", "forecast", "numDeriv", "optimx", "quantreg", "sandwich", "texreg", "zoo"] }, "midastouch": { "name": "midastouch", @@ -82781,7 +83603,7 @@ "name": "midi", "version": "0.1.0", "sha256": "06dc0lazi7pkdm66isaqa9igfrl8dq4klpg06aggmilgay09fi5s", - "depends": ["cli", "ggplot2", "plotly", "purrr", "R6", "rlang", "withr"] + "depends": ["R6", "cli", "ggplot2", "plotly", "purrr", "rlang", "withr"] }, "midrangeMCP": { "name": "midrangeMCP", @@ -82791,9 +83613,9 @@ }, "miesmuschel": { "name": "miesmuschel", - "version": "0.0.4-1", - "sha256": "1n2svgi926m8i8d1yzj4dyy1nhxr8m46qp3fpi2kjnprxs303rnd", - "depends": ["bbotk", "checkmate", "data_table", "lgr", "matrixStats", "mlr3misc", "paradox", "R6"] + "version": "0.0.4-2", + "sha256": "0pqp9rpk0jmbkfxi5vq8ij7s3y9ykk9kn0bsz9y4qw8z8j8grmv1", + "depends": ["R6", "bbotk", "checkmate", "data_table", "lgr", "matrixStats", "mlr3misc", "paradox"] }, "mifa": { "name": "mifa", @@ -82801,6 +83623,12 @@ "sha256": "1rj3ba746f8759gird0vpvyb4fl0z2ihccpiv3qkr3sc64wgplln", "depends": ["checkmate", "dplyr", "mice"] }, + "mig": { + "name": "mig", + "version": "1.0", + "sha256": "1l7p2bbcz888s3m339p63i6490savjqvv5g4awznzpfbllp0zi4i", + "depends": ["Rcpp", "RcppArmadillo", "TruncatedNormal", "statmod"] + }, "migest": { "name": "migest", "version": "2.0.4", @@ -82809,15 +83637,15 @@ }, "migraph": { "name": "migraph", - "version": "1.3.4", - "sha256": "1j43apygc7m5gff07zabv3plm3hhhnv091fdxkvzlms9w0f2j1zy", - "depends": ["dplyr", "furrr", "future", "generics", "ggplot2", "igraph", "manynet", "network", "pillar", "purrr", "rlang", "sna", "tidygraph", "tidyr"] + "version": "1.4.1", + "sha256": "0nr5y9yxwny8k4z5jm742k7n9r4s00xlkqbynfdf4apd5y6q8snm", + "depends": ["dplyr", "furrr", "future", "generics", "ggplot2", "manynet", "purrr"] }, "migrate": { "name": "migrate", - "version": "0.4.0", - "sha256": "0yf0c7gcn2q8sx0havhqaxk6z69bagfd58drpbqkkpsp62bnq875", - "depends": ["dplyr", "magrittr", "rlang", "tibble", "tidyr"] + "version": "0.5.0", + "sha256": "04whq58zm83s9y66bzb390q6cwj006gv4abv0b63fx1rkvfh9drw", + "depends": ["cli", "dplyr", "glue", "rlang", "tibble", "tidyr"] }, "migration_indices": { "name": "migration.indices", @@ -82835,25 +83663,37 @@ "name": "miic", "version": "1.5.3", "sha256": "1wrvgzi91jirn5n5fvvbhhpcga7l75h149sz1g1r1wbci181l3bg", - "depends": ["ppcor", "Rcpp", "scales"] + "depends": ["Rcpp", "ppcor", "scales"] }, "mikropml": { "name": "mikropml", "version": "1.6.1", "sha256": "13dlzrwyl4sqklypva35qq5194yc95fcpsyclvisdrky040xgxsy", - "depends": ["caret", "dplyr", "e1071", "glmnet", "kernlab", "MLmetrics", "randomForest", "rlang", "rpart", "xgboost"] + "depends": ["MLmetrics", "caret", "dplyr", "e1071", "glmnet", "kernlab", "randomForest", "rlang", "rpart", "xgboost"] }, "mildsvm": { "name": "mildsvm", "version": "0.4.0", "sha256": "02n93ck8458xliqwp226v5b7691a9jx5i7b1q9n0nqc74xkm8h1i", - "depends": ["dplyr", "e1071", "kernlab", "magrittr", "mvtnorm", "pillar", "pROC", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["dplyr", "e1071", "kernlab", "magrittr", "mvtnorm", "pROC", "pillar", "purrr", "rlang", "tibble", "tidyr"] + }, + "milorGWAS": { + "name": "milorGWAS", + "version": "0.7", + "sha256": "052bavj7wmkjcnm6vjswpg1zkawqjn5yy3z6zi4gklxci53a1z1i", + "depends": ["Rcpp", "RcppEigen", "gaston"] }, "milr": { "name": "milr", "version": "0.3.1", "sha256": "03hihr1w5j0mlvi5vm9m5vb9i6nyb6lsji3xmv0chpczabd85mzy", - "depends": ["glmnet", "numDeriv", "pipeR", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "glmnet", "numDeriv", "pipeR"] + }, + "mimdo": { + "name": "mimdo", + "version": "0.1.0", + "sha256": "1p0qz2z421pw2yaglg745ccs6yyn5ww4rzspsfikdpr1js7lx4a4", + "depends": [] }, "mime": { "name": "mime", @@ -82865,7 +83705,7 @@ "name": "mimi", "version": "0.2.0", "sha256": "1ig34qd37my74nmlv3jcfrj7cnd55alxpf2flf2sssk2ws1y56xh", - "depends": ["data_table", "doParallel", "FactoMineR", "foreach", "glmnet", "rARPACK", "softImpute"] + "depends": ["FactoMineR", "data_table", "doParallel", "foreach", "glmnet", "rARPACK", "softImpute"] }, "mimiSBM": { "name": "mimiSBM", @@ -82875,8 +83715,8 @@ }, "mimsy": { "name": "mimsy", - "version": "0.6.4", - "sha256": "1hbgjrgm4d4bvdkr8wvirvvv87f1wcnasd0909x38zjivr57dgda", + "version": "0.6.5", + "sha256": "1cxr3pcm32cbl3nqblh8s8lx6pn72sgnp63ib0gvcysr8rdx1gza", "depends": ["dplyr", "lubridate", "magrittr", "openxlsx"] }, "minMSE": { @@ -82901,7 +83741,7 @@ "name": "mind", "version": "1.1.0", "sha256": "01ncwc1kkfa0gfmrnvl93lvzlcjl6r30a3fs65lq15b132rncgwq", - "depends": ["data_table", "dplyr", "JWileymisc", "MASS", "Matrix", "tm"] + "depends": ["JWileymisc", "MASS", "Matrix", "data_table", "dplyr", "tm"] }, "mineCitrus": { "name": "mineCitrus", @@ -82913,7 +83753,7 @@ "name": "mineSweepR", "version": "0.1.1", "sha256": "0bnaa0652pspsd80v66b83np58429g8044941bsmr3apgf8660gj", - "depends": ["ComplexHeatmap", "dplyr", "gsignal", "hms", "InteractiveComplexHeatmap", "mgc", "mmand", "pals", "rlang"] + "depends": ["ComplexHeatmap", "InteractiveComplexHeatmap", "dplyr", "gsignal", "hms", "mgc", "mmand", "pals", "rlang"] }, "mined": { "name": "mined", @@ -82941,15 +83781,15 @@ }, "miniMeta": { "name": "miniMeta", - "version": "0.3.1", - "sha256": "0qd55a0a03a3q62hjpmi0815x4jff6zhrxavm1wb46c09y1hm62j", - "depends": ["colourpicker", "jsonlite", "markdown", "meta", "metafor", "readxl", "rhandsontable", "shiny", "shinyjs", "shinyWidgets", "WriteXLS"] + "version": "0.3.2", + "sha256": "1v0nfmk034xz6nn0pnas0g11bbg0k86c99qykqadqr9kr9iwjrki", + "depends": ["WriteXLS", "colourpicker", "jsonlite", "markdown", "meta", "metafor", "readxl", "rhandsontable", "shiny", "shinyWidgets", "shinyjs"] }, "miniPCH": { "name": "miniPCH", "version": "0.3.2", "sha256": "1z8zsagas50ndwygkxfdi933x5vq3dmq5kwmi3lg28hqdaf2hcnm", - "depends": ["checkmate", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "checkmate"] }, "miniUI": { "name": "miniUI", @@ -82957,6 +83797,12 @@ "sha256": "1h5h2sc57h95d6bsgs95l26911g38hvjc1v50bc31xl9689l2as5", "depends": ["htmltools", "shiny"] }, + "minic": { + "name": "minic", + "version": "1.0", + "sha256": "1n7xhgwlfyy18y1d0rjnkrvfdblkd4n55c673fyrkdc1q8lpmngw", + "depends": ["Rcpp", "RcppEigen"] + }, "minidown": { "name": "minidown", "version": "0.4.0", @@ -82975,6 +83821,12 @@ "sha256": "0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r", "depends": [] }, + "minimapR": { + "name": "minimapR", + "version": "0.0.1.0", + "sha256": "1cf0mp0mc3zalsi4fa2khz139hky0vjzj0cfay70prh5cll7dm3b", + "depends": ["Rsamtools", "git2r", "pafr"] + }, "minimax": { "name": "minimax", "version": "1.1.1", @@ -82983,8 +83835,8 @@ }, "minimaxApprox": { "name": "minimaxApprox", - "version": "0.4.2", - "sha256": "069r2wcjlkv91vqvs7s089hmclngcrvawycr5vkfp65l7rlrg1qp", + "version": "0.4.3", + "sha256": "1gk7rh17g3xdsr42a1f6lp23ny9vkzig8srfwscd0v5hxx2cbqr9", "depends": [] }, "minioclient": { @@ -83001,8 +83853,8 @@ }, "minqa": { "name": "minqa", - "version": "1.2.7", - "sha256": "1qigwpcj8mz1fgq4ikq64pkqfwgw50bd928xbc4xaq6q3sflbwvn", + "version": "1.2.8", + "sha256": "0rslvg4imaijzb5z6vzsx4zqhrna1jk6qkp2kxnzqy0rn2wy8har", "depends": ["Rcpp"] }, "minque": { @@ -83033,31 +83885,31 @@ "name": "mipfp", "version": "3.2.1", "sha256": "1gxazpg81vj5dywpb6jb29188jw28qil6pfygawa7znnjn3k5ca6", - "depends": ["cmm", "numDeriv", "Rsolnp"] + "depends": ["Rsolnp", "cmm", "numDeriv"] }, "mipplot": { "name": "mipplot", "version": "0.3.1", "sha256": "126arvxq6gmaiwk3n3p0slnb1mhs3qf993m4lx95nlmnv612ag66", - "depends": ["data_table", "dplyr", "ggplot2", "readr", "readxl", "reshape", "reshape2", "rlang", "shiny", "shiny_i18n", "shinyalert", "shinyWidgets", "showtext", "showtextdb", "stringr", "tidyr"] + "depends": ["data_table", "dplyr", "ggplot2", "readr", "readxl", "reshape", "reshape2", "rlang", "shiny", "shinyWidgets", "shiny_i18n", "shinyalert", "showtext", "showtextdb", "stringr", "tidyr"] }, "mirai": { "name": "mirai", - "version": "1.1.0", - "sha256": "0nq3wrgizlii8a17i033glbl5ixgdwjxzpyi5yzf0icxbqaylm5w", + "version": "1.2.0", + "sha256": "18x7imacq8gj44afjh77pq4cvnqnjfcnvqdp7hkmh19qbl708cpk", "depends": ["nanonext"] }, "mirt": { "name": "mirt", - "version": "1.41", - "sha256": "0qx8qr4zd5jliamsmpr0c321g3k9ks1ki4fvy5lia3xgihp2s6yh", - "depends": ["dcurver", "Deriv", "GPArotation", "gridExtra", "lattice", "Matrix", "mgcv", "pbapply", "Rcpp", "RcppArmadillo", "vegan"] + "version": "1.42", + "sha256": "15yzgph7957wvrfnxwc9p27hckamkkxmi0c02x6p5i505ya16lly", + "depends": ["Deriv", "GPArotation", "Matrix", "Rcpp", "RcppArmadillo", "SimDesign", "dcurver", "gridExtra", "lattice", "mgcv", "pbapply", "vegan"] }, "mirtCAT": { "name": "mirtCAT", - "version": "1.13", - "sha256": "1vlv93wjwj3ajf0mqjz38bi9fdk1sl0wqyqr7kjhhdj4znhrprbs", - "depends": ["lattice", "lpSolve", "markdown", "mirt", "pbapply", "Rcpp", "RcppArmadillo", "shiny"] + "version": "1.14", + "sha256": "02774rxl1rpk7j60bhib77yygj80c0c0s3fzzwjzdpsz91hg29z1", + "depends": ["Rcpp", "RcppArmadillo", "lattice", "lpSolve", "markdown", "mirt", "pbapply", "shiny"] }, "mirtjml": { "name": "mirtjml", @@ -83093,7 +83945,7 @@ "name": "miscF", "version": "0.1-5", "sha256": "0g6wk2zxqq6j949hnbvwmfd72y25zjfbrfrfxsj21q84w41fgjkb", - "depends": ["MASS", "MCMCpack", "mvtnorm", "R2jags"] + "depends": ["MASS", "MCMCpack", "R2jags", "mvtnorm"] }, "miscFuncs": { "name": "miscFuncs", @@ -83117,13 +83969,13 @@ "name": "misclassGLM", "version": "0.3.5", "sha256": "0iph5nz4hnfgx32xwc8z201ap18b543x8by6hcpkbk8jcbxswhjq", - "depends": ["foreach", "MASS", "Matrix", "mlogit", "numDeriv", "ucminf"] + "depends": ["MASS", "Matrix", "foreach", "mlogit", "numDeriv", "ucminf"] }, "miscset": { "name": "miscset", "version": "1.1.0", "sha256": "1gwi7jnqdf2fa8yk8gmcc7dcv72bbdl7yj3yccj3r5jjk41vdp91", - "depends": ["data_table", "devtools", "ggplot2", "gridExtra", "Rcpp", "xtable"] + "depends": ["Rcpp", "data_table", "devtools", "ggplot2", "gridExtra", "xtable"] }, "miselect": { "name": "miselect", @@ -83133,15 +83985,15 @@ }, "mispitools": { "name": "mispitools", - "version": "1.0.0", - "sha256": "1s54dm6c48ahib2p5firx3l0fxqxrcvfpk02smisbxna85vbfwd5", - "depends": ["DirichletReg", "dplyr", "forrel", "ggplot2", "highcharter", "patchwork", "pedtools", "plotly", "purrr", "reshape2", "shiny", "tidyr", "tidyverse"] + "version": "1.2.0", + "sha256": "09sgs6s005s8lqxb7v21k4vjwkw5kz0dg4b44k11fvgvb8l1i3ba", + "depends": ["DirichletReg", "dplyr", "forrel", "ggplot2", "patchwork", "pedtools", "purrr", "reshape2", "shiny", "tidyr", "tidyverse"] }, "mispr": { "name": "mispr", "version": "1.0.0", "sha256": "166piax3f7di8h0i07fbdx45lxz1p47j378v6yl6zdc3525adpjx", - "depends": ["e1071", "MASS", "penalized"] + "depends": ["MASS", "e1071", "penalized"] }, "missCforest": { "name": "missCforest", @@ -83153,19 +84005,19 @@ "name": "missCompare", "version": "1.0.3", "sha256": "03j69xw54d076znx19dplw4xznvgky90hxh3wgypg0g5pjg63y53", - "depends": ["Amelia", "data_table", "dplyr", "ggdendro", "ggplot2", "Hmisc", "ltm", "magrittr", "MASS", "Matrix", "mi", "mice", "missForest", "missMDA", "pcaMethods", "plyr", "rlang", "tidyr", "VIM"] + "depends": ["Amelia", "Hmisc", "MASS", "Matrix", "VIM", "data_table", "dplyr", "ggdendro", "ggplot2", "ltm", "magrittr", "mi", "mice", "missForest", "missMDA", "pcaMethods", "plyr", "rlang", "tidyr"] }, "missDeaths": { "name": "missDeaths", "version": "2.7", "sha256": "1c8vbc7r1g4dkngmal6iqg7piw656h1vc6cmpkv16vjn4j0w2n2c", - "depends": ["cmprsk", "MASS", "mitools", "Rcpp", "relsurv", "rms", "survival"] + "depends": ["MASS", "Rcpp", "cmprsk", "mitools", "relsurv", "rms", "survival"] }, "missDiag": { "name": "missDiag", "version": "1.0.1", "sha256": "04zd3nds44sy7nz73kdq9wjis3r9zyp0kda54mfqps1sh9jnizlq", - "depends": ["cobalt", "Formula"] + "depends": ["Formula", "cobalt"] }, "missForest": { "name": "missForest", @@ -83183,7 +84035,7 @@ "name": "missMDA", "version": "1.19", "sha256": "0p76jlzqayhwqwinaxhf69s3c5hxk4hmncvw4dsyybwvha25hrzr", - "depends": ["doParallel", "FactoMineR", "foreach", "ggplot2", "mice", "mvtnorm"] + "depends": ["FactoMineR", "doParallel", "foreach", "ggplot2", "mice", "mvtnorm"] }, "missMethods": { "name": "missMethods", @@ -83193,39 +84045,39 @@ }, "missRanger": { "name": "missRanger", - "version": "2.4.0", - "sha256": "1zycbpxqc04f65nqfv0zdi0q5kp9kmaw7s868v959198a4r23lc1", + "version": "2.6.0", + "sha256": "1qwjimdzb88pmqscpkl35y2lawrybps5wn3dnrpkh2zj2zxjf1md", "depends": ["FNN", "ranger"] }, "missSBM": { "name": "missSBM", "version": "1.0.4", "sha256": "1gw485bn7mddj5i555clp3saxas77r9r4970ahf1y3vpk43wjj02", - "depends": ["future_apply", "ggplot2", "igraph", "magrittr", "Matrix", "nloptr", "R6", "Rcpp", "RcppArmadillo", "rlang", "RSpectra", "sbm"] + "depends": ["Matrix", "R6", "RSpectra", "Rcpp", "RcppArmadillo", "future_apply", "ggplot2", "igraph", "magrittr", "nloptr", "rlang", "sbm"] }, "missSOM": { "name": "missSOM", "version": "1.0.1", "sha256": "15cqqz6f2npsz78yhj3ialzmlx7a8jsf27gfmmj4h68r01czyhs1", - "depends": ["kpodclustr", "Rcpp"] + "depends": ["Rcpp", "kpodclustr"] }, "missingHE": { "name": "missingHE", "version": "1.5.0", "sha256": "0my6a768w7lixh6cw453bl2nrb5aqdiri309p5kp4psp17pzllak", - "depends": ["bayesplot", "BCEA", "coda", "ggmcmc", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "loo", "mcmcplots", "mcmcr", "R2jags"] + "depends": ["BCEA", "R2jags", "bayesplot", "coda", "ggmcmc", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "loo", "mcmcplots", "mcmcr"] }, "missoNet": { "name": "missoNet", "version": "1.2.0", "sha256": "1k7959wjxxpzgrnwil7n51zf76zyri8c2m4m5h2w9az5pil2qmf0", - "depends": ["circlize", "ComplexHeatmap", "glasso", "mvtnorm", "pbapply", "Rcpp", "RcppArmadillo", "scatterplot3d"] + "depends": ["ComplexHeatmap", "Rcpp", "RcppArmadillo", "circlize", "glasso", "mvtnorm", "pbapply", "scatterplot3d"] }, "misspi": { "name": "misspi", "version": "0.1.0", "sha256": "0rbkwfq3b7gvq3qwn3acbrdv4npvm5ixz6y7877alraqd0qjg1c8", - "depends": ["doParallel", "doSNOW", "foreach", "ggplot2", "glmnet", "lightgbm", "plotly", "SIS"] + "depends": ["SIS", "doParallel", "doSNOW", "foreach", "ggplot2", "glmnet", "lightgbm", "plotly"] }, "mistr": { "name": "mistr", @@ -83237,12 +84089,12 @@ "name": "mistral", "version": "2.2.2", "sha256": "1ssgglw2y1bkhlwcrmw8bv8ic6vl5nj4l482hlq8kv1dgyrnbsas", - "depends": ["DiceKriging", "doParallel", "e1071", "foreach", "ggplot2", "iterators", "Matrix", "mvtnorm", "quadprog", "Rcpp"] + "depends": ["DiceKriging", "Matrix", "Rcpp", "doParallel", "e1071", "foreach", "ggplot2", "iterators", "mvtnorm", "quadprog"] }, "misty": { "name": "misty", - "version": "0.6.3", - "sha256": "1s0vkxxh13r62rdq2xlwkw93chi862ynr7lznp29g5iz3r3dz103", + "version": "0.6.5", + "sha256": "1gj244gywajfp7gzcn4rdcy88n1qp2gj9jn9aswhhhiha4fp620k", "depends": ["ggplot2", "haven", "lavaan", "lme4", "nlme", "norm", "readxl", "rstudioapi", "writexl"] }, "misuvi": { @@ -83267,7 +84119,7 @@ "name": "mitre", "version": "1.0.0", "sha256": "0r5phzxiibwwhx3qh623grfy070c3vzm4q07rzhsp5q5ycb5jhn5", - "depends": ["dplyr", "igraph", "jsonlite", "plyr", "RJSONIO", "rlang", "stringr", "tidyr"] + "depends": ["RJSONIO", "dplyr", "igraph", "jsonlite", "plyr", "rlang", "stringr", "tidyr"] }, "mix": { "name": "mix", @@ -83285,7 +84137,7 @@ "name": "mixAR", "version": "0.22.8", "sha256": "1fr3i54yvxqvh78pgn8y5hdwp1sf00gl9shg5bc7nnmmm84ki78q", - "depends": ["BB", "combinat", "e1071", "fGarch", "gbutils", "MCMCpack", "mvtnorm", "permute", "Rdpack", "timeDate"] + "depends": ["BB", "MCMCpack", "Rdpack", "combinat", "e1071", "fGarch", "gbutils", "mvtnorm", "permute", "timeDate"] }, "mixIndependR": { "name": "mixIndependR", @@ -83297,7 +84149,13 @@ "name": "mixKernel", "version": "0.9-1", "sha256": "0vak6qfhva666mjqwn16ivcdjsw31qic36g62g4p3ng2jvv57f32", - "depends": ["corrplot", "ggplot2", "LDRTools", "markdown", "Matrix", "mixOmics", "phyloseq", "psych", "quadprog", "reticulate", "vegan"] + "depends": ["LDRTools", "Matrix", "corrplot", "ggplot2", "markdown", "mixOmics", "phyloseq", "psych", "quadprog", "reticulate", "vegan"] + }, + "mixOofA": { + "name": "mixOofA", + "version": "1.0", + "sha256": "1npa4hbs9xgirb4smsbjpwvk8jk8nh4y6i644lwdsr3zf34rxr7d", + "depends": ["Rsolnp", "combinat", "crossdes", "doofa", "mixexp"] }, "mixPHM": { "name": "mixPHM", @@ -83309,7 +84167,7 @@ "name": "mixR", "version": "0.2.0", "sha256": "1iarsys7jyi3zck01y7415xwyd1knnh1fkc8z4ipfd63nnlm2pqc", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "mixRaschTools": { "name": "mixRaschTools", @@ -83327,7 +84185,7 @@ "name": "mixSSG", "version": "2.1.1", "sha256": "0aqzyfpq568vgk2rjh7i93azfa990mvapddcdjwh3xyyb3flsas4", - "depends": ["ars", "MASS", "rootSolve"] + "depends": ["MASS", "ars", "rootSolve"] }, "mixbox": { "name": "mixbox", @@ -83357,7 +84215,7 @@ "name": "mixdir", "version": "0.3.0", "sha256": "1vgxxzsrl660agk4cjw4q4gx28fv5mkzpjy4qanq5c9mqpcxbxkc", - "depends": ["extraDistr", "Rcpp"] + "depends": ["Rcpp", "extraDistr"] }, "mixdist": { "name": "mixdist", @@ -83375,19 +84233,19 @@ "name": "mixedCCA", "version": "1.6.2", "sha256": "07apl37kwj47w14jxsvwdiacnwd517zs3ff2c70fhb6ncbgp8adv", - "depends": ["fMultivar", "irlba", "latentcor", "MASS", "Matrix", "mnormt", "pcaPP", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "fMultivar", "irlba", "latentcor", "mnormt", "pcaPP"] }, "mixedLSR": { "name": "mixedLSR", "version": "0.1.0", "sha256": "0a514w88k1lwcdmq7ginn4qmf0mdj747lhgxzx15nh0hp0xq26lc", - "depends": ["ggplot2", "grpreg", "MASS", "purrr"] + "depends": ["MASS", "ggplot2", "grpreg", "purrr"] }, "mixedMem": { "name": "mixedMem", "version": "1.1.2", "sha256": "1p0gplfcn663xp40dk0yg70qffn1fwa9gxv7bppflgm9wkn8g3l5", - "depends": ["BH", "gtools", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "gtools"] }, "mixedsde": { "name": "mixedsde", @@ -83405,19 +84263,19 @@ "name": "mixgb", "version": "1.0.2", "sha256": "1i6sckdbgckp84wvmsbay20vfqqzzphif2r7v3fc158gfw1vvkr4", - "depends": ["data_table", "ggplot2", "Matrix", "mice", "Rfast", "rlang", "scales", "tidyr", "xgboost"] + "depends": ["Matrix", "Rfast", "data_table", "ggplot2", "mice", "rlang", "scales", "tidyr", "xgboost"] }, "mixhvg": { "name": "mixhvg", "version": "0.1.1", "sha256": "1vwn4wdxs81r08x4f8zlpdqr1hvf6dk59qqrbxyj9xdk35hw9il4", - "depends": ["Matrix", "scran", "scuttle", "Seurat", "SingleCellExperiment"] + "depends": ["Matrix", "Seurat", "SingleCellExperiment", "scran", "scuttle"] }, "mixl": { "name": "mixl", "version": "1.3.4", "sha256": "1j3mqbrjgib57cyirmqgsx6livm63bx9xzps2j4fa6wgivwbk5xr", - "depends": ["maxLik", "numDeriv", "randtoolbox", "Rcpp", "readr", "sandwich", "stringr"] + "depends": ["Rcpp", "maxLik", "numDeriv", "randtoolbox", "readr", "sandwich", "stringr"] }, "mixlm": { "name": "mixlm", @@ -83441,7 +84299,7 @@ "name": "mixpoissonreg", "version": "1.0.0", "sha256": "1pk45p96kwl3gvi5523vm824s1bb5aqpn9qqpqy8kjy2pd2a4k32", - "depends": ["dplyr", "Formula", "gamlss", "gamlss_dist", "generics", "ggplot2", "ggrepel", "gridExtra", "lmtest", "magrittr", "pbapply", "Rfast", "rlang", "statmod", "tibble"] + "depends": ["Formula", "Rfast", "dplyr", "gamlss", "gamlss_dist", "generics", "ggplot2", "ggrepel", "gridExtra", "lmtest", "magrittr", "pbapply", "rlang", "statmod", "tibble"] }, "mixsmsn": { "name": "mixsmsn", @@ -83453,13 +84311,13 @@ "name": "mixsqp", "version": "0.3-54", "sha256": "13pv3mmz514kl4svxqwyk5b241dy1q52khwdc6rmh712ia8xxl7p", - "depends": ["irlba", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "irlba"] }, "mixtools": { "name": "mixtools", "version": "2.0.0", "sha256": "03by64xi7yka0hzc1qyz1jdqzah6isvr3cdsc7g5v6hb4f178kl5", - "depends": ["kernlab", "MASS", "plotly", "scales", "segmented", "survival"] + "depends": ["MASS", "kernlab", "plotly", "scales", "segmented", "survival"] }, "mixtox": { "name": "mixtox", @@ -83477,13 +84335,13 @@ "name": "mixture", "version": "2.1.1", "sha256": "0a7dy6p5lhs4sff5w1p6fha9w2vwd39fav34b0zsmyw0k4fjg2ah", - "depends": ["BH", "lattice", "Rcpp", "RcppArmadillo", "RcppGSL"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "RcppGSL", "lattice"] }, "mixvlmc": { "name": "mixvlmc", "version": "0.2.1", "sha256": "1bx9qvdi5fq69bwa25l9sqcdyihswjhmqrsslmnqfq7wzfxy3d3q", - "depends": ["assertthat", "butcher", "ggplot2", "nnet", "pROC", "Rcpp", "rlang", "stringr", "VGAM", "withr"] + "depends": ["Rcpp", "VGAM", "assertthat", "butcher", "ggplot2", "nnet", "pROC", "rlang", "stringr", "withr"] }, "mize": { "name": "mize", @@ -83495,19 +84353,19 @@ "name": "mizer", "version": "2.5.1", "sha256": "0s6vjvik0qcnrsb7f976cx623xg9jspkiskpzly2w9wbs6bbmnbg", - "depends": ["assertthat", "deSolve", "dplyr", "ggplot2", "ggrepel", "lifecycle", "lubridate", "plotly", "plyr", "progress", "Rcpp", "reshape2", "rlang"] + "depends": ["Rcpp", "assertthat", "deSolve", "dplyr", "ggplot2", "ggrepel", "lifecycle", "lubridate", "plotly", "plyr", "progress", "reshape2", "rlang"] }, "mkde": { "name": "mkde", - "version": "0.2", - "sha256": "0ihf3ahlppriba9j29zs7gfjxl49nsrrinnjzcxgca1yc5fikqcf", - "depends": ["raster", "Rcpp", "sp"] + "version": "0.3", + "sha256": "1g6g8zh0inza6lak4l6az2czqz22c8sf1pbcakibbhc5f1h2b8g9", + "depends": ["Rcpp", "sf", "stars", "terra"] }, "mkin": { "name": "mkin", "version": "1.2.6", "sha256": "1k90z1kqk57rib0f7rm23qmcvk942b0rggbjfyc7jzrba3v65qpb", - "depends": ["deSolve", "inline", "lmtest", "nlme", "numDeriv", "pkgbuild", "R6", "rlang", "saemix", "vctrs"] + "depends": ["R6", "deSolve", "inline", "lmtest", "nlme", "numDeriv", "pkgbuild", "rlang", "saemix", "vctrs"] }, "mknapsack": { "name": "mknapsack", @@ -83525,7 +84383,7 @@ "name": "mlVAR", "version": "0.5.2", "sha256": "0xvkhbjkzrvg9x5rd1yn9kzk27f4khwil1837l83jyd33hlyfsj3", - "depends": ["abind", "arm", "clusterGeneration", "corpcor", "dplyr", "graphicalVAR", "lme4", "MplusAutomation", "mvtnorm", "plyr", "qgraph", "rlang"] + "depends": ["MplusAutomation", "abind", "arm", "clusterGeneration", "corpcor", "dplyr", "graphicalVAR", "lme4", "mvtnorm", "plyr", "qgraph", "rlang"] }, "mlapi": { "name": "mlapi", @@ -83555,7 +84413,7 @@ "name": "mldr", "version": "0.4.3", "sha256": "07lbxpydz78fya11bl3l1ckhbps3nx43ddh3z09ygg70jjbdhxwq", - "depends": ["circlize", "shiny", "XML"] + "depends": ["XML", "circlize", "shiny"] }, "mldr_datasets": { "name": "mldr.datasets", @@ -83579,7 +84437,7 @@ "name": "mlearning", "version": "1.2.1", "sha256": "0fh28i36smpybhzd2kni435m7wf20i3yib6h7jy173r1v5adzkba", - "depends": ["class", "e1071", "ipred", "MASS", "nnet", "randomForest", "rpart"] + "depends": ["MASS", "class", "e1071", "ipred", "nnet", "randomForest", "rpart"] }, "mlegp": { "name": "mlegp", @@ -83597,13 +84455,13 @@ "name": "mlergm", "version": "0.8", "sha256": "0bpdljmbn4lfm263jcsp0hrknixn49m7hqsx0jjk3pfwhgjlajh8", - "depends": ["cowplot", "ergm", "GGally", "ggplot2", "lpSolve", "Matrix", "network", "plyr", "reshape2", "sna", "stringr"] + "depends": ["GGally", "Matrix", "cowplot", "ergm", "ggplot2", "lpSolve", "network", "plyr", "reshape2", "sna", "stringr"] }, "mlexperiments": { "name": "mlexperiments", - "version": "0.0.3", - "sha256": "0xkrppicb8h9ccnk25bl957ip6di19vk6fnc25r8q4ckpsyw2kz1", - "depends": ["data_table", "kdry", "progress", "R6", "splitTools"] + "version": "0.0.4", + "sha256": "1l2zrlar8wv4hi1w76kcbrhx8fbnbh03wq0jj5y0sbmy9x3aza76", + "depends": ["R6", "data_table", "kdry", "progress", "splitTools"] }, "mlf": { "name": "mlf", @@ -83615,12 +84473,12 @@ "name": "mlfit", "version": "0.5.3", "sha256": "0nyk5vmy2gkpz022djacy80gibskv96z0rsmjz2rw14zhc5kizsh", - "depends": ["BB", "dplyr", "forcats", "hms", "kimisc", "lifecycle", "Matrix", "plyr", "rlang", "tibble", "wrswoR"] + "depends": ["BB", "Matrix", "dplyr", "forcats", "hms", "kimisc", "lifecycle", "plyr", "rlang", "tibble", "wrswoR"] }, "mlflow": { "name": "mlflow", - "version": "2.13.1", - "sha256": "0jzqqdwychrandbcsih3g1gcpj0hg7lw53c6c762akll14g7yd5k", + "version": "2.14.1", + "sha256": "17rdg8admwih6dhmci089l8kwidbbjni98fl2al5480abhm63n74", "depends": ["base64enc", "forge", "fs", "git2r", "glue", "httpuv", "httr", "ini", "jsonlite", "openssl", "processx", "purrr", "rlang", "swagger", "tibble", "withr", "yaml", "zeallot"] }, "mlim": { @@ -83631,9 +84489,9 @@ }, "mllrnrs": { "name": "mllrnrs", - "version": "0.0.3", - "sha256": "08xrinkbl4bws7hbid6907b618mqays4zimkwdni9s2amah3ja4b", - "depends": ["data_table", "kdry", "mlexperiments", "R6"] + "version": "0.0.4", + "sha256": "0yrsab0m3p8fjxhbvb58k7lz3l2vvnf339gfb1wfc68wjmpczk5z", + "depends": ["R6", "data_table", "kdry", "mlexperiments"] }, "mlmRev": { "name": "mlmRev", @@ -83651,19 +84509,19 @@ "name": "mlmhelpr", "version": "0.1.1", "sha256": "16p94w6lh6k5dlfmi1kfdnm7q05c0d30gf08qcm9z9mm9yyilp0d", - "depends": ["lme4", "mathjaxr", "Rdpack"] + "depends": ["Rdpack", "lme4", "mathjaxr"] }, "mlmi": { "name": "mlmi", "version": "1.1.2", "sha256": "1nkg7h0r716yv9y6xnx8qcpvrqr6cxlhqrcyiihkwgwbmkgkp5sz", - "depends": ["cat", "gsl", "MASS", "Matrix", "mix", "nlme", "norm"] + "depends": ["MASS", "Matrix", "cat", "gsl", "mix", "nlme", "norm"] }, "mlmm_gwas": { "name": "mlmm.gwas", "version": "1.0.6", "sha256": "14xp8k7sww1skyw5l2006gpaw2c6yrri5nmfx4yav4vqdlhcj2k1", - "depends": ["coxme", "Matrix", "multcomp", "multcompView", "sommer"] + "depends": ["Matrix", "coxme", "multcomp", "multcompView", "sommer"] }, "mlmpower": { "name": "mlmpower", @@ -83679,21 +84537,21 @@ }, "mlmts": { "name": "mlmts", - "version": "1.1.1", - "sha256": "10xy4qzdik1rjs11ql798ig7y5cm3hjc61n5dhxfzpi1w0wk3smi", - "depends": ["AID", "caret", "ClusterR", "complexplus", "DescTools", "dtw", "e1071", "fda_usc", "forecast", "freqdom", "geigen", "ggplot2", "igraph", "MASS", "Matrix", "MTS", "multiwave", "pracma", "pspline", "psych", "quantspec", "randomForest", "ranger", "Rdpack", "Rfast", "TSA", "TSclust", "TSdist", "tseries", "tseriesChaos", "tsfeatures", "waveslim"] + "version": "1.1.2", + "sha256": "0268zypg99yhizh5ashdwivckaqzfw60fb01f2lryz8c9hpa21mr", + "depends": ["AID", "ClusterR", "DescTools", "MASS", "MTS", "Matrix", "Rdpack", "Rfast", "TSA", "TSclust", "TSdist", "caret", "complexplus", "dtw", "e1071", "fda_usc", "forecast", "freqdom", "geigen", "ggplot2", "igraph", "multiwave", "pracma", "pspline", "psych", "quantspec", "randomForest", "ranger", "tseries", "tseriesChaos", "tsfeatures", "waveslim"] }, "mlogit": { "name": "mlogit", "version": "1.1-1", "sha256": "0hyi6gi03n895iydrfr1ba2ifbsd6lyjyhkq62d95ghhniysjgkg", - "depends": ["dfidx", "Formula", "lmtest", "MASS", "Rdpack", "statmod", "zoo"] + "depends": ["Formula", "MASS", "Rdpack", "dfidx", "lmtest", "statmod", "zoo"] }, "mlogitBMA": { "name": "mlogitBMA", "version": "0.1-7", "sha256": "0q8c5897z8f519nf6p55ksc610a9dbpnah2rr4srij4gs9a4clx1", - "depends": ["abind", "BMA", "maxLik"] + "depends": ["BMA", "abind", "maxLik"] }, "mlpack": { "name": "mlpack", @@ -83705,25 +84563,25 @@ "name": "mlpwr", "version": "1.1.0", "sha256": "18w0vklxy61v0r33xi57j3s76iwsb2cs2cjhg1gjyxzl07byj89j", - "depends": ["DiceKriging", "digest", "ggplot2", "randtoolbox", "rgenoud", "rlist", "WeightSVM"] + "depends": ["DiceKriging", "WeightSVM", "digest", "ggplot2", "randtoolbox", "rgenoud", "rlist"] }, "mlquantify": { "name": "mlquantify", "version": "0.2.0", "sha256": "1fpwvix0f4bmqb1y1b6wryndqp6j24dwsspbfx1zrnhzwj1v4i9i", - "depends": ["caret", "FNN", "randomForest"] + "depends": ["FNN", "caret", "randomForest"] }, "mlr": { "name": "mlr", "version": "2.19.2", "sha256": "1icpa3xa0f7l40i52l3pl43m98j69r75qnqf1yp7wyh6y54p1rl5", - "depends": ["backports", "BBmisc", "checkmate", "data_table", "ggplot2", "parallelMap", "ParamHelpers", "stringi", "survival", "XML"] + "depends": ["BBmisc", "ParamHelpers", "XML", "backports", "checkmate", "data_table", "ggplot2", "parallelMap", "stringi", "survival"] }, "mlr3": { "name": "mlr3", - "version": "0.19.0", - "sha256": "0dgik4lfrw5m2sqxp33kzkdp7ihlcm27y5p5g5b9wah7h7ramiqs", - "depends": ["backports", "checkmate", "data_table", "evaluate", "future", "future_apply", "lgr", "mlbench", "mlr3measures", "mlr3misc", "palmerpenguins", "paradox", "parallelly", "R6", "RhpcBLASctl", "uuid"] + "version": "0.20.2", + "sha256": "0k3qyc2jyffdpnykn5ays5slgxzij803186xgwpjg38l9r13w9r1", + "depends": ["R6", "backports", "checkmate", "data_table", "evaluate", "future", "future_apply", "lgr", "mlbench", "mlr3measures", "mlr3misc", "palmerpenguins", "paradox", "parallelly", "uuid"] }, "mlr3batchmark": { "name": "mlr3batchmark", @@ -83735,13 +84593,13 @@ "name": "mlr3benchmark", "version": "0.1.6", "sha256": "1bhn0lm0k9dm9mbji6cwgqkwsa1qg928fbjs8chra9s3d3bzcb0x", - "depends": ["checkmate", "data_table", "ggplot2", "mlr3misc", "R6"] + "depends": ["R6", "checkmate", "data_table", "ggplot2", "mlr3misc"] }, "mlr3cluster": { "name": "mlr3cluster", "version": "0.1.9", "sha256": "09fsw2b43f9m7clv1qwylimyz622snhn9ykq3xwbiric7zr4ca91", - "depends": ["backports", "checkmate", "clue", "cluster", "data_table", "fpc", "mlr3", "mlr3misc", "paradox", "R6"] + "depends": ["R6", "backports", "checkmate", "clue", "cluster", "data_table", "fpc", "mlr3", "mlr3misc", "paradox"] }, "mlr3data": { "name": "mlr3data", @@ -83753,97 +84611,97 @@ "name": "mlr3db", "version": "0.5.2", "sha256": "1cq22h9yj27ighh4clyak1xwx2wb5v4803hd7lrhnlgzs85dmhj2", - "depends": ["backports", "checkmate", "data_table", "mlr3", "mlr3misc", "R6"] + "depends": ["R6", "backports", "checkmate", "data_table", "mlr3", "mlr3misc"] }, "mlr3fairness": { "name": "mlr3fairness", "version": "0.3.2", "sha256": "0rm6l50prwjjy55p14zs9mkdrczbyl7f63fqsmh7r5xjahcsnfi7", - "depends": ["checkmate", "data_table", "ggplot2", "mlr3", "mlr3learners", "mlr3measures", "mlr3misc", "mlr3pipelines", "paradox", "R6", "rlang"] + "depends": ["R6", "checkmate", "data_table", "ggplot2", "mlr3", "mlr3learners", "mlr3measures", "mlr3misc", "mlr3pipelines", "paradox", "rlang"] }, "mlr3fda": { "name": "mlr3fda", - "version": "0.1.2", - "sha256": "1r1dqhh9s09vz3fsxwss7af7wb4nmm7lynh9wl67mjs52yf5d4k2", - "depends": ["checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3pipelines", "paradox", "R6", "tf"] + "version": "0.2.0", + "sha256": "0y086z58zbazcxcdqk82rvfs1yifah6y4ps3vd679n09z08wg3mm", + "depends": ["R6", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3pipelines", "paradox", "tf"] }, "mlr3filters": { "name": "mlr3filters", "version": "0.8.0", "sha256": "16z359bc2li7f35xk4g08np3r2a3127avv0ak6bn9bywcs13z6bl", - "depends": ["backports", "checkmate", "data_table", "mlr3", "mlr3misc", "paradox", "R6"] + "depends": ["R6", "backports", "checkmate", "data_table", "mlr3", "mlr3misc", "paradox"] }, "mlr3fselect": { "name": "mlr3fselect", - "version": "0.12.0", - "sha256": "1f18y4ahnjzlwk9pfs87i80kb6z84hgyc5cdlj3mafawq790hg1h", - "depends": ["bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "paradox", "R6"] + "version": "1.0.0", + "sha256": "0bw5gxcxydvh14j6zy9q1k32b84v76lm6ksa4dh1l6pck14a76pj", + "depends": ["R6", "bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "paradox", "stabm"] }, "mlr3hyperband": { "name": "mlr3hyperband", - "version": "0.5.0", - "sha256": "1x6vfhadxlb4c9q61d5qv957mkyfwdwchzbg3flfd0j28b4bck1p", - "depends": ["bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3tuning", "paradox", "R6"] + "version": "0.6.0", + "sha256": "1sr9bccy1zmbj83i6nlwkfmi98b40bl1l9q4lzl8n0knnavnzcj7", + "depends": ["R6", "bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3tuning", "paradox"] }, "mlr3learners": { "name": "mlr3learners", - "version": "0.6.0", - "sha256": "06gz6h19cnb62js1b35nddy453dyj64mr788p8ww56kgfk6yzxr8", - "depends": ["checkmate", "data_table", "mlr3", "mlr3misc", "paradox", "R6"] + "version": "0.7.0", + "sha256": "0skfxmmqxfxxm0m9r46pvixnlpqfjqb3hmg2ggvgjnk47klha8v2", + "depends": ["R6", "checkmate", "data_table", "mlr3", "mlr3misc", "paradox"] }, "mlr3mbo": { "name": "mlr3mbo", - "version": "0.2.2", - "sha256": "0jdj5dx6jb7n0g950h0j8jhafdj5mcalv5vxfiyf07myr6mjipri", - "depends": ["bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3tuning", "paradox", "R6", "spacefillr"] + "version": "0.2.4", + "sha256": "1i97mqsxgdipl2gklp2h7d7s3jm977jzm6arxn6hvshw6a2ikzgm", + "depends": ["R6", "bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3tuning", "paradox", "spacefillr"] }, "mlr3measures": { "name": "mlr3measures", - "version": "0.5.0", - "sha256": "0k0i1xx63lds1870p2ljy1dlp2i376gdd0sq9s4xiqljqjb8va57", - "depends": ["checkmate", "PRROC"] + "version": "0.6.0", + "sha256": "0vhqcfn3fijj2lwjrly2lyb9bs5msqvlwdv1asfkr9shkw61piik", + "depends": ["PRROC", "checkmate"] }, "mlr3misc": { "name": "mlr3misc", - "version": "0.15.0", - "sha256": "1l40l0sx1dgs2rdblx7pd9nk93flad6y1mvppzg7qf4cyn8gfc3x", - "depends": ["backports", "checkmate", "data_table", "digest", "R6"] + "version": "0.15.1", + "sha256": "1yakq3ir3i46h1a1vnqqdlp4qznnwwk7zmjv7v831jmah9fzf5m3", + "depends": ["R6", "backports", "checkmate", "data_table", "digest"] }, "mlr3oml": { "name": "mlr3oml", "version": "0.10.0", "sha256": "0qlgqq22zy5kdgp6l6fg3yx8ywxpy4yaa2567j9z1pg5ij9yd49h", - "depends": ["backports", "bit64", "checkmate", "curl", "data_table", "jsonlite", "lgr", "mlr3", "mlr3misc", "paradox", "R6", "stringi", "uuid", "withr"] + "depends": ["R6", "backports", "bit64", "checkmate", "curl", "data_table", "jsonlite", "lgr", "mlr3", "mlr3misc", "paradox", "stringi", "uuid", "withr"] }, "mlr3pipelines": { "name": "mlr3pipelines", - "version": "0.5.2", - "sha256": "1glp4z5wnvcsil37gzvbvazn73088vilks9c5limnwhz8f454147", - "depends": ["backports", "checkmate", "data_table", "digest", "lgr", "mlr3", "mlr3misc", "paradox", "R6", "withr"] + "version": "0.6.0", + "sha256": "09wivgnj3jj39ngrxjip6ss0138fvjsmn4dmi5v0a78ppvsr96sp", + "depends": ["R6", "backports", "checkmate", "data_table", "digest", "lgr", "mlr3", "mlr3misc", "paradox", "withr"] }, "mlr3resampling": { "name": "mlr3resampling", - "version": "2024.4.14", - "sha256": "0fgn46vh8m9i2vb3ppkghl54a4rrp2mw8fm54l2kzj53y6hsjbvd", - "depends": ["checkmate", "data_table", "mlr3", "mlr3misc", "paradox", "R6"] + "version": "2024.7.7", + "sha256": "114vcxrmkr37yzlc14454phgl7mr49j482pcwa6c700k6d5l00ja", + "depends": ["R6", "checkmate", "data_table", "mlr3", "mlr3misc", "paradox"] }, "mlr3shiny": { "name": "mlr3shiny", "version": "0.3.0", "sha256": "0rv5ybg6l1n7j6gq8wmvl1gd1mdmqd52vl91hkpv9k1l1w8m8mph", - "depends": ["data_table", "dplyr", "DT", "Metrics", "mlr3", "mlr3learners", "mlr3measures", "mlr3pipelines", "patchwork", "plyr", "purrr", "shiny", "shinyalert", "shinydashboard", "shinyjs", "shinyWidgets", "stringr"] + "depends": ["DT", "Metrics", "data_table", "dplyr", "mlr3", "mlr3learners", "mlr3measures", "mlr3pipelines", "patchwork", "plyr", "purrr", "shiny", "shinyWidgets", "shinyalert", "shinydashboard", "shinyjs", "stringr"] }, "mlr3spatial": { "name": "mlr3spatial", "version": "0.5.0", "sha256": "105wscgkrlgckrmisr1b5xf8wlj9w2w7ir8w1280isyg2zp1gva8", - "depends": ["checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "R6", "sf", "terra"] + "depends": ["R6", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "sf", "terra"] }, "mlr3spatiotempcv": { "name": "mlr3spatiotempcv", "version": "2.3.1", "sha256": "04n5bzppkj9fmdhd54qk8738id0sfd3ij7p31l3hxmjbak5inh83", - "depends": ["checkmate", "data_table", "ggplot2", "mlr3", "mlr3misc", "paradox", "R6"] + "depends": ["R6", "checkmate", "data_table", "ggplot2", "mlr3", "mlr3misc", "paradox"] }, "mlr3summary": { "name": "mlr3summary", @@ -83851,59 +84709,65 @@ "sha256": "16r9sjjjy3f3aqjw1npibqk0pwhdajh6r3rkrypjfl80mhk9fpi4", "depends": ["backports", "checkmate", "cli", "data_table", "future_apply", "mlr3", "mlr3misc"] }, + "mlr3torch": { + "name": "mlr3torch", + "version": "0.1.0", + "sha256": "100fwy1qg14z4wxv8gvq3aib4a59r2hviij9mkdd3vamkbjbf827", + "depends": ["R6", "backports", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "mlr3pipelines", "paradox", "torch", "withr"] + }, "mlr3tuning": { "name": "mlr3tuning", - "version": "0.20.0", - "sha256": "1y1cqfqdx9v0lfb4619y2hw6clhhjzi7hjwrpwzdpd7ymcx3dgi3", - "depends": ["bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "paradox", "R6"] + "version": "1.0.0", + "sha256": "0lmczwydnd2fbvb43vqxvy58clygipwpqrnydhc8hlmnjy9vbzc6", + "depends": ["R6", "bbotk", "checkmate", "data_table", "lgr", "mlr3", "mlr3misc", "paradox"] }, "mlr3tuningspaces": { "name": "mlr3tuningspaces", - "version": "0.5.0", - "sha256": "1snrd7xq388mvqh0ydaxvx8k9iwp40g06c3irp0m718jw3wsz5vm", - "depends": ["checkmate", "data_table", "mlr3", "mlr3misc", "mlr3tuning", "paradox", "R6"] + "version": "0.5.1", + "sha256": "0zcmhzrr9b3blg49dx3zmxnm5qh87k0rlka0vk2jp59ifd2yggrr", + "depends": ["R6", "checkmate", "data_table", "mlr3", "mlr3misc", "mlr3tuning", "paradox"] }, "mlr3verse": { "name": "mlr3verse", - "version": "0.2.8", - "sha256": "0ld4vch1qdq3gh8vhj38s2wz7acn5z7f8hxmnwnrq22g44gckd8s", + "version": "0.3.0", + "sha256": "1azkpmkki8c02vpz98ixsx17civk86dq7c8wwnvm9jlg3spr8hhd", "depends": ["bbotk", "data_table", "mlr3", "mlr3cluster", "mlr3data", "mlr3filters", "mlr3fselect", "mlr3hyperband", "mlr3learners", "mlr3mbo", "mlr3misc", "mlr3pipelines", "mlr3tuning", "mlr3tuningspaces", "mlr3viz", "paradox"] }, "mlr3viz": { "name": "mlr3viz", - "version": "0.8.0", - "sha256": "1m2f54yqhk1bd4c30vd1z509yblz6y4i8qkwhg73aa1sflnsycvf", + "version": "0.9.0", + "sha256": "1dm0xkrmd4c9hs22rxpxvvd4xxki4nxh2x7s06s2d7n3dhr4l3xh", "depends": ["checkmate", "data_table", "ggplot2", "mlr3misc", "scales", "viridis"] }, "mlrCPO": { "name": "mlrCPO", "version": "0.3.7-7", "sha256": "0nia2f8j5vgiradlcqi618mlv7146ml2pvbzh4p89p1pk75p6v0l", - "depends": ["backports", "BBmisc", "checkmate", "mlr", "ParamHelpers", "stringi"] + "depends": ["BBmisc", "ParamHelpers", "backports", "checkmate", "mlr", "stringi"] }, "mlrMBO": { "name": "mlrMBO", "version": "1.1.5.1", "sha256": "16fwj7m28g4km7yalqppxmh3lw2jln0z072l6awia38qkdg6xwhc", - "depends": ["backports", "BBmisc", "checkmate", "data_table", "lhs", "mlr", "parallelMap", "ParamHelpers", "smoof"] + "depends": ["BBmisc", "ParamHelpers", "backports", "checkmate", "data_table", "lhs", "mlr", "parallelMap", "smoof"] }, "mlrintermbo": { "name": "mlrintermbo", "version": "0.5.1-1", "sha256": "0hghnpsh6jm3vghn03v483cmqin2wxsvcahhzjg6x0wdszhmskhv", - "depends": ["backports", "bbotk", "callr", "checkmate", "data_table", "lhs", "mlr3misc", "mlr3tuning", "paradox", "R6"] + "depends": ["R6", "backports", "bbotk", "callr", "checkmate", "data_table", "lhs", "mlr3misc", "mlr3tuning", "paradox"] }, "mlrpro": { "name": "mlrpro", "version": "0.1.2", "sha256": "1j8w8ji1n6cahcbyi1q4zq8gmhpcl15pb97f7bl1km29f4x4f272", - "depends": ["car", "dplyr", "MASS"] + "depends": ["MASS", "car", "dplyr"] }, "mlrv": { "name": "mlrv", - "version": "0.1.1", - "sha256": "1r6q8wakvyz0d1fjc0xpl66yxj0c9jr721yx3h3986x6gi6s0k81", - "depends": ["doParallel", "foreach", "magrittr", "mathjaxr", "numDeriv", "Rcpp", "RcppArmadillo", "xtable"] + "version": "0.1.2", + "sha256": "1q3xjbdl729q5l2iljyj4m7k04lg1i0vg0vm8s3qlkpjidazxd5r", + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "magrittr", "mathjaxr", "numDeriv", "xtable"] }, "mlsbm": { "name": "mlsbm", @@ -83925,15 +84789,15 @@ }, "mlsurvlrnrs": { "name": "mlsurvlrnrs", - "version": "0.0.3", - "sha256": "0x4spjcgbqz13fxnyabd1vypbdg6r94zmh7h5h65rhnb5j8fgsm3", - "depends": ["data_table", "kdry", "mlexperiments", "mllrnrs", "R6"] + "version": "0.0.4", + "sha256": "11yp41fvmr2ij3sqky5hjzblqsdwsywyn3r62cdld5b5fiv487hg", + "depends": ["R6", "data_table", "kdry", "mlexperiments", "mllrnrs"] }, "mlt": { "name": "mlt", "version": "1.5-1", "sha256": "1bhcw5b2mwvr9qsssxd9qd9qn5k0v8g925dqfm1ziycniaprm9g6", - "depends": ["alabama", "basefun", "BB", "coneproj", "Matrix", "nloptr", "numDeriv", "sandwich", "survival", "variables"] + "depends": ["BB", "Matrix", "alabama", "basefun", "coneproj", "nloptr", "numDeriv", "sandwich", "survival", "variables"] }, "mlt_docreg": { "name": "mlt.docreg", @@ -83951,7 +84815,13 @@ "name": "mltools", "version": "0.3.5", "sha256": "045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh", - "depends": ["data_table", "Matrix"] + "depends": ["Matrix", "data_table"] + }, + "mlts": { + "name": "mlts", + "version": "1.0.0", + "sha256": "017kl04f70iglrpzxc24kl4v65rf3lqi3fy0wdhnaffr0bf7qyri", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cowplot", "dplyr", "ggplot2", "mvtnorm", "pdftools", "rlang", "rmarkdown", "rstan", "rstantools"] }, "mlxR": { "name": "mlxR", @@ -83993,13 +84863,13 @@ "name": "mmaqshiny", "version": "1.0.0", "sha256": "0v44hd7h9d8hdd2avwwwwc0a8rzm5ij3yhryxkrw7bwvr12zsp17", - "depends": ["Cairo", "caTools", "data_table", "dplyr", "DT", "ggplot2", "htmltools", "leaflet", "lubridate", "plotly", "shiny", "shinyjs", "stringr", "XML", "xts", "zoo"] + "depends": ["Cairo", "DT", "XML", "caTools", "data_table", "dplyr", "ggplot2", "htmltools", "leaflet", "lubridate", "plotly", "shiny", "shinyjs", "stringr", "xts", "zoo"] }, "mmb": { "name": "mmb", "version": "0.13.3", "sha256": "07nni04fb0gprma368axzz303db12hp22fz1a0xwh3bbh6n7zb9g", - "depends": ["doParallel", "foreach", "Rdpack"] + "depends": ["Rdpack", "doParallel", "foreach"] }, "mmc": { "name": "mmc", @@ -84017,7 +84887,7 @@ "name": "mmcif", "version": "0.1.1", "sha256": "14kp0n24nxcfnfq8drxfhsvd4apg4f7iwdamzw005rlhi5srmw3r", - "depends": ["alabama", "psqn", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["Rcpp", "RcppArmadillo", "alabama", "psqn", "testthat"] }, "mmcm": { "name": "mmcm", @@ -84047,19 +84917,19 @@ "name": "mmiCATs", "version": "0.1.1", "sha256": "1dnh77ac2m8sbv3ly1wny2nn86f13bs90f91gzzy83x2r4a3bvfj", - "depends": ["broom", "broom_mixed", "clusterSEs", "DT", "lmerTest", "MASS", "mmcards", "robust", "robustbase", "shiny", "shinythemes"] + "depends": ["DT", "MASS", "broom", "broom_mixed", "clusterSEs", "lmerTest", "mmcards", "robust", "robustbase", "shiny", "shinythemes"] }, "mmibain": { "name": "mmibain", "version": "0.2.0", "sha256": "1ii2lfsbmp0n85a3y76zp87fpj5nm5ndigjyl09sl0cl2g8q7ql7", - "depends": ["bain", "broom", "car", "DT", "e1071", "ggplot2", "igraph", "lavaan", "mmcards", "psych", "shiny", "shinythemes"] + "depends": ["DT", "bain", "broom", "car", "e1071", "ggplot2", "igraph", "lavaan", "mmcards", "psych", "shiny", "shinythemes"] }, "mmirestriktor": { "name": "mmirestriktor", - "version": "0.2.1", - "sha256": "1qgj3rrri87dj3h3v6r7f5kjyy8b85qn0s7i62qll0lf8fnj334d", - "depends": ["DT", "MASS", "mmcards", "restriktor", "shiny", "shinythemes"] + "version": "0.3.1", + "sha256": "008x9bypp34aq59v6dqns5qjnh94lrng6yjiiaybi5acdyrvipbr", + "depends": ["DT", "MASS", "RPostgres", "mmcards", "pool", "restriktor", "shiny", "shinythemes"] }, "mmmgee": { "name": "mmmgee", @@ -84083,7 +84953,7 @@ "name": "mmpca", "version": "2.0.3", "sha256": "1kzjwl0sn8cdgw3jw95lg90vgh47iw293ffn7c0fb9kgxisd6dma", - "depends": ["digest", "Rcpp", "RcppEigen", "RcppGSL"] + "depends": ["Rcpp", "RcppEigen", "RcppGSL", "digest"] }, "mmpp": { "name": "mmpp", @@ -84099,9 +84969,9 @@ }, "mmrm": { "name": "mmrm", - "version": "0.3.11", - "sha256": "1w7kpjsa59zri2jqaxlr4b7lg57xrnnwlak9wb6midlb3n8pw5f1", - "depends": ["checkmate", "generics", "lifecycle", "Matrix", "nlme", "Rcpp", "RcppEigen", "Rdpack", "stringr", "testthat", "tibble", "TMB"] + "version": "0.3.12", + "sha256": "0bgvh7bjijsfv6rb8syhmiqd600pdc3kg9z1dx2iskghxjwiww93", + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rdpack", "TMB", "checkmate", "generics", "lifecycle", "nlme", "stringr", "testthat", "tibble"] }, "mmsample": { "name": "mmsample", @@ -84125,7 +84995,7 @@ "name": "mnda", "version": "1.0.9", "sha256": "1lmkxdfym1jfq05vpjky1b6nz1xwzsdh9mz3017v23qyg7dmbzyi", - "depends": ["aggregation", "assertthat", "ggplot2", "ggraph", "igraph", "keras", "magrittr", "MASS", "Matrix", "reticulate", "tensorflow", "usethis"] + "depends": ["MASS", "Matrix", "aggregation", "assertthat", "ggplot2", "ggraph", "igraph", "keras", "magrittr", "reticulate", "tensorflow", "usethis"] }, "mnet": { "name": "mnet", @@ -84137,7 +85007,7 @@ "name": "mnis", "version": "0.3.1", "sha256": "03ss2sp4gjjxlfip95p2vcc0nz8q7khm3iiyh1362n2xb6yp78k0", - "depends": ["dplyr", "httr", "janitor", "jsonlite", "purrr", "Rcpp", "stringi", "tibble"] + "depends": ["Rcpp", "dplyr", "httr", "janitor", "jsonlite", "purrr", "stringi", "tibble"] }, "mniw": { "name": "mniw", @@ -84161,7 +85031,7 @@ "name": "mnorm", "version": "1.2.2", "sha256": "1ivd40cmcp66h4yccbll90fgqmq03pgy3hgklz8wxj0j479r21z0", - "depends": ["hpa", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "hpa"] }, "mnormt": { "name": "mnormt", @@ -84185,7 +85055,7 @@ "name": "mob", "version": "0.4.2", "sha256": "1mv0bsik3bdkmnggy2fv0482fqv2yck1ycw49wd45p2dyfzzwcsd", - "depends": ["gbm", "Rborist"] + "depends": ["Rborist", "gbm"] }, "mobilityIndexR": { "name": "mobilityIndexR", @@ -84195,9 +85065,9 @@ }, "mobr": { "name": "mobr", - "version": "2.0.2", - "sha256": "0dvsarxkjcjn3f40qkx5pdjpvq7hr6l5nvdz6adxlr1sdbadfcws", - "depends": ["dplyr", "egg", "geosphere", "ggplot2", "pbapply", "plotrix", "purrr", "rlang", "scales", "tibble", "tidyr", "vctrs"] + "version": "3.0.0", + "sha256": "02bxacq7m1ln4abd0kdzqndwj3384kfbfxcn13qqmix0i6q1i4y6", + "depends": ["dplyr", "egg", "geosphere", "ggplot2", "pbapply", "plotrix", "purrr", "rlang", "scales", "scam", "sf", "tibble", "tidyr", "vctrs"] }, "mobsim": { "name": "mobsim", @@ -84205,6 +85075,12 @@ "sha256": "0ny924lsj12fqfagjwd2pq8prk0xgm89ray5b07dw7yfdcisx90i", "depends": ["Rcpp", "sads", "vegan"] }, + "moc_gapbk": { + "name": "moc.gapbk", + "version": "0.1.1", + "sha256": "1d29aiks5qpn983b5yamsw8h0gh9hh4lgjdx0sgi6aj79sg0lfa8", + "depends": ["amap", "doMPI", "doParallel", "doSNOW", "foreach", "nsga2R"] + }, "mockery": { "name": "mockery", "version": "0.4.4", @@ -84275,7 +85151,7 @@ "name": "modeLLtest", "version": "1.0.4", "sha256": "0m9djx3d2k0y38h0wyscwvzj0pvlfjqz2ar7j1rb29mhm7y8np70", - "depends": ["coxrobust", "MASS", "quantreg", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "coxrobust", "quantreg", "survival"] }, "modeest": { "name": "modeest", @@ -84299,7 +85175,7 @@ "name": "modelDown", "version": "1.1", "sha256": "1l0aggkh0ykpqrp59bdz1cyl1ai397cw4hya80b7fm7s49imwczg", - "depends": ["archivist", "auditor", "breakDown", "DALEX", "devtools", "drifter", "DT", "ggplot2", "kableExtra", "psych", "svglite", "whisker"] + "depends": ["DALEX", "DT", "archivist", "auditor", "breakDown", "devtools", "drifter", "ggplot2", "kableExtra", "psych", "svglite", "whisker"] }, "modelObj": { "name": "modelObj", @@ -84339,9 +85215,9 @@ }, "modeldata": { "name": "modeldata", - "version": "1.3.0", - "sha256": "035gyxgs9byij9d5vpw35a96f7xlhfj3k6c140mql4yfplm5rk23", - "depends": ["dplyr", "MASS", "purrr", "rlang", "tibble"] + "version": "1.4.0", + "sha256": "15cfvvhf1c8zaanxdrrh934kz8250j0r5k6df0qkl5dz8cqv8sgb", + "depends": ["MASS", "dplyr", "purrr", "rlang", "tibble"] }, "modeldatatoo": { "name": "modeldatatoo", @@ -84365,7 +85241,7 @@ "name": "modelfactory", "version": "1.0.0", "sha256": "1bdcfcbd1lnx683npvwbxigqg3mbgnm2ji46nfywbay6disrc15h", - "depends": ["dplyr", "MASS", "tibble"] + "depends": ["MASS", "dplyr", "tibble"] }, "modelfree": { "name": "modelfree", @@ -84405,9 +85281,15 @@ }, "modeltime": { "name": "modeltime", - "version": "1.2.8", - "sha256": "1wvmz4wr972msfrld26ygahn1sky3p10x18975kbaksrw8qgz4ag", - "depends": ["cli", "dials", "doParallel", "dplyr", "forcats", "foreach", "forecast", "ggplot2", "glue", "gt", "hardhat", "janitor", "magrittr", "parallelly", "parsnip", "plotly", "prophet", "purrr", "reactable", "rlang", "scales", "StanHeaders", "stringr", "tibble", "tidymodels", "tidyr", "tidyverse", "timetk", "workflows", "xgboost", "yardstick"] + "version": "1.3.0", + "sha256": "035y6qcz4jkgf1k297ykyglp82303a69iswymx8c0qmcvw4x66nc", + "depends": ["StanHeaders", "cli", "dials", "doParallel", "dplyr", "forcats", "foreach", "forecast", "ggplot2", "glue", "gt", "hardhat", "janitor", "magrittr", "parallelly", "parsnip", "plotly", "prophet", "purrr", "reactable", "rlang", "scales", "stringr", "tibble", "tidymodels", "tidyr", "timetk", "workflows", "xgboost", "yardstick"] + }, + "modeltime_ensemble": { + "name": "modeltime.ensemble", + "version": "1.0.4", + "sha256": "1262p4lp4vr3d6s5x5cwrbib5vfr9apl4fvyhxzpvvc1vck5a94p", + "depends": ["cli", "doParallel", "dplyr", "foreach", "generics", "glmnet", "magrittr", "modeltime", "modeltime_resample", "purrr", "recipes", "rlang", "rsample", "stringr", "tibble", "tictoc", "tidyr", "timetk", "tune", "workflows", "yardstick"] }, "modeltime_resample": { "name": "modeltime.resample", @@ -84447,8 +85329,8 @@ }, "moderndive": { "name": "moderndive", - "version": "0.5.5", - "sha256": "0bgq6wsyyi6nsxqqh2k3zsmk64pfvb57z8pzk8ych3xih491hzlm", + "version": "0.6.1", + "sha256": "1gd4mb8i2bl5h9q0ahcpqjqw1ji120q9p305q9rfkfpv5nzwbwyr", "depends": ["broom", "dplyr", "formula_tools", "ggplot2", "glue", "infer", "janitor", "knitr", "magrittr", "rlang", "stringr", "tibble"] }, "modest": { @@ -84461,7 +85343,7 @@ "name": "modesto", "version": "0.1.4", "sha256": "12p5azbbng1hnvs5b86g85871dn5534iv7r6fw5v1iv1h1rcypcr", - "depends": ["markovchain", "Rcpp"] + "depends": ["Rcpp", "markovchain"] }, "modgetxl": { "name": "modgetxl", @@ -84481,6 +85363,12 @@ "sha256": "1m1c36vyzyl0v0gfy9fqlprvs3pvanj20dn56kxpniykdylscn3w", "depends": ["boot"] }, + "modisfast": { + "name": "modisfast", + "version": "0.9.1", + "sha256": "1h3r5iwqrjzvfavsmvr6i5x2gvl76g44d712gnir9jl8sdhk0ynr", + "depends": ["curl", "dplyr", "httr", "lubridate", "magrittr", "purrr", "rvest", "sf", "stringr", "terra", "xml2"] + }, "modmarg": { "name": "modmarg", "version": "0.9.6", @@ -84491,7 +85379,7 @@ "name": "modnets", "version": "0.9.0", "sha256": "01mh7sbgq3796h6ciih5xww8hm0xn8975jv0784yw15hxhzfchci", - "depends": ["abind", "corpcor", "ggplot2", "glinternet", "glmnet", "gridExtra", "gtools", "igraph", "interactionTest", "leaps", "lme4", "lmerTest", "Matrix", "mvtnorm", "pbapply", "plyr", "psych", "qgraph", "reshape2", "systemfit"] + "depends": ["Matrix", "abind", "corpcor", "ggplot2", "glinternet", "glmnet", "gridExtra", "gtools", "igraph", "interactionTest", "leaps", "lme4", "lmerTest", "mvtnorm", "pbapply", "plyr", "psych", "qgraph", "reshape2", "systemfit"] }, "modopt_matlab": { "name": "modopt.matlab", @@ -84501,9 +85389,9 @@ }, "modsem": { "name": "modsem", - "version": "0.1.4", - "sha256": "06abbk34blacwf7w38fxjh88l26v7wcpg8svmj76ll2pssybxv8r", - "depends": ["dplyr", "gaussquad", "ggplot2", "lavaan", "MplusAutomation", "mvnfast", "mvtnorm", "nlme", "purrr", "R6", "Rcpp", "RcppArmadillo", "rlang", "stringr"] + "version": "1.0.2", + "sha256": "1qab2lqj6p3lkfnyf72a2sk18lclnlisl3ky59998nylx3raanan", + "depends": ["MplusAutomation", "R6", "Rcpp", "RcppArmadillo", "dplyr", "fastGHQuad", "ggplot2", "lavaan", "mvnfast", "mvtnorm", "nlme", "purrr", "rlang", "stringr"] }, "moduleColor": { "name": "moduleColor", @@ -84533,25 +85421,25 @@ "name": "mojson", "version": "0.1", "sha256": "077c92jhizpvg5gdwq1zb0d74m743l5qylj6df8hhgyvahswnhnq", - "depends": ["compareDF", "iterators", "magrittr", "RJSONIO", "stringr", "tidyr"] + "depends": ["RJSONIO", "compareDF", "iterators", "magrittr", "stringr", "tidyr"] }, "mokken": { "name": "mokken", - "version": "3.1.1", - "sha256": "0jnc3gsa4qfl4f6pg42m3mqncz0dgmdlx5jwhr0ck4gy02rpjv59", - "depends": ["poLCA", "Rcpp"] + "version": "3.1.2", + "sha256": "0wfm4yg9pzl5ng3mlng7p9qzvql51sxbs4gv006xanif5pkrn9dd", + "depends": ["Rcpp", "poLCA"] }, "molaR": { "name": "molaR", "version": "5.3", "sha256": "01l68a4jsp0dlylnp9ij1db0q4510l38jlql787bi6ah07xwf8zq", - "depends": ["alphahull", "pracma", "rgl", "Rvcg"] + "depends": ["Rvcg", "alphahull", "pracma", "rgl"] }, "mombf": { "name": "mombf", "version": "3.5.4", "sha256": "0pyq8jlx36075b77p5kalq5fn0y8f3s7l8crn3gvpjmp9shqv22y", - "depends": ["dplyr", "glasso", "glmnet", "intervals", "Matrix", "mclust", "mgcv", "mvtnorm", "ncvreg", "pracma", "Rcpp", "RcppArmadillo", "sparseMatrixStats", "survival"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr", "glasso", "glmnet", "intervals", "mclust", "mgcv", "mvtnorm", "ncvreg", "pracma", "sparseMatrixStats", "survival"] }, "momentchi2": { "name": "momentchi2", @@ -84575,7 +85463,7 @@ "name": "momentuHMM", "version": "1.5.5", "sha256": "0isd18b0fdf75gk6lbm34hgrhwj1fnl7airpv56xffsdvhvj6xjq", - "depends": ["Brobdingnag", "CircStats", "crawl", "doParallel", "doRNG", "foreach", "MASS", "mvtnorm", "numDeriv", "raster", "Rcpp", "RcppArmadillo", "rlang", "sp"] + "depends": ["Brobdingnag", "CircStats", "MASS", "Rcpp", "RcppArmadillo", "crawl", "doParallel", "doRNG", "foreach", "mvtnorm", "numDeriv", "raster", "rlang", "sp"] }, "monaco": { "name": "monaco", @@ -84635,13 +85523,13 @@ "name": "monobin", "version": "0.2.4", "sha256": "1060c7g2dz4cnvlfp2dnrl5fblvifmcskrgykqbfswpyfna1lw4a", - "depends": ["dplyr", "Hmisc"] + "depends": ["Hmisc", "dplyr"] }, "monobinShiny": { "name": "monobinShiny", "version": "0.1.0", "sha256": "1ix376j39fby5571irf8i5bmz8i7nnvfzbvs5cv0k42dcgq93m0g", - "depends": ["dplyr", "DT", "monobin", "shiny", "shinydashboard", "shinyjs"] + "depends": ["DT", "dplyr", "monobin", "shiny", "shinydashboard", "shinyjs"] }, "monochromeR": { "name": "monochromeR", @@ -84653,13 +85541,13 @@ "name": "monographaR", "version": "1.3.1", "sha256": "0sqhz3zpbk57s2sm56csqr198fclk9x8zq3bfamzardpax8r2cjr", - "depends": ["circular", "png", "raster", "rmarkdown", "rnaturalearth", "rpart", "sf", "shiny", "shinydashboard", "shinythemes", "shinyWidgets", "sp", "terra"] + "depends": ["circular", "png", "raster", "rmarkdown", "rnaturalearth", "rpart", "sf", "shiny", "shinyWidgets", "shinydashboard", "shinythemes", "sp", "terra"] }, "monomvn": { "name": "monomvn", "version": "1.9-20", "sha256": "0if2b13yak9x0sfcwghhih901hk8n762w59r53k0949vf5f336yd", - "depends": ["lars", "MASS", "mvtnorm", "pls", "quadprog"] + "depends": ["MASS", "lars", "mvtnorm", "pls", "quadprog"] }, "monoreg": { "name": "monoreg", @@ -84677,7 +85565,7 @@ "name": "monotonicity", "version": "1.3.1", "sha256": "0bb6sl8yykry25a86qfggi36ggr1xrxcqsnzp6rb6na228hbwa2z", - "depends": ["lmtest", "MASS", "sandwich"] + "depends": ["MASS", "lmtest", "sandwich"] }, "monreg": { "name": "monreg", @@ -84685,6 +85573,12 @@ "sha256": "1i0dxv6azb6x2i7yd9w0254b50qgiidccrn5jn6rqvb5y3dj2rn1", "depends": [] }, + "moocore": { + "name": "moocore", + "version": "0.1.0", + "sha256": "0xnix4izfl7hs8an1w8jvdsd6gcw61njqhzh2wy9mxkvl7kjw7jg", + "depends": ["Rdpack", "matrixStats"] + }, "moodef": { "name": "moodef", "version": "1.1.0", @@ -84695,13 +85589,13 @@ "name": "moodleR", "version": "1.0.1", "sha256": "0wbrnbs03i6xzyhq82d75yjryfqfl11k55sj9h0j9f7z46dq7glp", - "depends": ["anytime", "cli", "config", "DBI", "dplyr", "ggplot2", "ggwordcloud", "glue", "lifecycle", "rlang", "RMariaDB", "RPostgres", "RSQLite", "scales", "stringr", "tidytext", "usethis"] + "depends": ["DBI", "RMariaDB", "RPostgres", "RSQLite", "anytime", "cli", "config", "dplyr", "ggplot2", "ggwordcloud", "glue", "lifecycle", "rlang", "scales", "stringr", "tidytext", "usethis"] }, "moodlequizR": { "name": "moodlequizR", "version": "2.1.1", "sha256": "1bigckdga0jqn0qx5y2x0g74g1ln2hmsdyrjvfmp0cvmscr9w271", - "depends": ["base64", "mvtnorm", "NMcalc", "shiny"] + "depends": ["NMcalc", "base64", "mvtnorm", "shiny"] }, "moonBook": { "name": "moonBook", @@ -84719,7 +85613,7 @@ "name": "mop", "version": "0.1.2", "sha256": "1x17mnh2lrgkqr1nzhk5dxmwpv9812i3ryvlspqhbrfadj3s76l7", - "depends": ["doSNOW", "foreach", "Rcpp", "snow", "terra"] + "depends": ["Rcpp", "doSNOW", "foreach", "snow", "terra"] }, "mopac": { "name": "mopac", @@ -84727,11 +85621,17 @@ "sha256": "07ljy6rwicyrv20l7zyxq2lb7qqfpl5mpv834m2n5c4air7sy23m", "depends": [] }, + "moranajp": { + "name": "moranajp", + "version": "0.9.7", + "sha256": "1vzid1j09s7v20y8bpfrl7xcz8lf8f5dg5npw3iz2ibvp2w5vjl7", + "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "purrr", "rlang", "rvest", "stringi", "stringr", "tibble", "tidyr"] + }, "moreparty": { "name": "moreparty", "version": "0.4", "sha256": "0zny9bffj8dfl6i76ylrcgrbfbawk6aksdfkn4vf57zg7qfv0yqh", - "depends": ["datamods", "DT", "foreach", "ggplot2", "iml", "MASS", "measures", "party", "partykit", "pdp", "phosphoricons", "plyr", "rclipboard", "rlang", "shiny", "shinyWidgets", "varImp", "vip"] + "depends": ["DT", "MASS", "datamods", "foreach", "ggplot2", "iml", "measures", "party", "partykit", "pdp", "phosphoricons", "plyr", "rclipboard", "rlang", "shiny", "shinyWidgets", "varImp", "vip"] }, "morepls": { "name": "morepls", @@ -84767,13 +85667,13 @@ "name": "morpheus", "version": "1.0-4", "sha256": "0y9immrs87yghp0j1h0vp1fhiah5wddfj6pj2hgcqch1imxprhy7", - "depends": ["jointDiag", "MASS", "pracma"] + "depends": ["MASS", "jointDiag", "pracma"] }, "morphomap": { "name": "morphomap", "version": "1.5", "sha256": "0kin6jvg3vlsbga0zr34nnq1zixicw7vsphiw45aifyfbnwiw0av", - "depends": ["Arothron", "colorRamps", "DescTools", "geometry", "lattice", "mgcv", "Morpho", "oce", "rgl", "Rvcg", "sp"] + "depends": ["Arothron", "DescTools", "Morpho", "Rvcg", "colorRamps", "geometry", "lattice", "mgcv", "oce", "rgl", "sp"] }, "morrowplots": { "name": "morrowplots", @@ -84781,12 +85681,6 @@ "sha256": "09kpsarbv32cylr0qp067m184lnj95p50ayi49w7sgwrs70xdanb", "depends": [] }, - "morse": { - "name": "morse", - "version": "3.3.2", - "sha256": "0534k96fhfdkfr3dh6q85fmsqqld7xv1zxvikwcb6z6by3nr9cpp", - "depends": ["coda", "deSolve", "dplyr", "epitools", "ggplot2", "gridExtra", "magrittr", "reshape2", "rjags", "tibble", "tidyr", "zoo"] - }, "mort": { "name": "mort", "version": "0.0.1", @@ -84797,25 +85691,25 @@ "name": "mortAAR", "version": "1.1.6", "sha256": "1n3s704k2lqpcbzk8rqa28jcqz37g2bdjkj6x1bygcbfdic2z0dc", - "depends": ["magrittr", "Rdpack", "reshape2", "rlang", "tibble"] + "depends": ["Rdpack", "magrittr", "reshape2", "rlang", "tibble"] }, "mosaic": { "name": "mosaic", "version": "1.9.1", "sha256": "0l7h3zg5izr5xxqy1sngz6fzbwdffzljnjmfbshzzbl4x80f5lwl", - "depends": ["dplyr", "ggformula", "ggplot2", "lattice", "MASS", "Matrix", "mosaicCore", "mosaicData", "purrr", "rlang", "tibble", "tidyr"] + "depends": ["MASS", "Matrix", "dplyr", "ggformula", "ggplot2", "lattice", "mosaicCore", "mosaicData", "purrr", "rlang", "tibble", "tidyr"] }, "mosaicCalc": { "name": "mosaicCalc", - "version": "0.6.1", - "sha256": "1538g36cfg3hlig8fcclri5cfqs94s8qxaqw4pa85c8s14k59dda", - "depends": ["cubature", "Deriv", "dplyr", "ggformula", "ggplot2", "glue", "MASS", "Matrix", "metR", "mosaic", "mosaicCore", "orthopolynom", "plotly", "rlang", "Ryacas", "sp", "tibble"] + "version": "0.6.4", + "sha256": "1fq3fjsj7jwai5hg36bi1d3plf98mywyn08yrcwrphnh4h42i71r", + "depends": ["Deriv", "MASS", "Matrix", "Ryacas", "calculus", "dplyr", "ggformula", "ggplot2", "glue", "metR", "mosaic", "mosaicCore", "orthopolynom", "rlang", "sp", "tibble"] }, "mosaicCore": { "name": "mosaicCore", "version": "0.9.4.0", "sha256": "0v3xhv6yfk1hc6a40jjgp6vvq102qa1l4n787pfywx6jhzbhamp2", - "depends": ["dplyr", "MASS", "rlang", "tidyr"] + "depends": ["MASS", "dplyr", "rlang", "tidyr"] }, "mosaicData": { "name": "mosaicData", @@ -84827,43 +85721,43 @@ "name": "mosaicModel", "version": "0.3.0", "sha256": "1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w", - "depends": ["caret", "dplyr", "ggformula", "ggplot2", "knitr", "lazyeval", "MASS", "mosaicCore", "testthat", "tibble", "tidyr", "tidyverse"] + "depends": ["MASS", "caret", "dplyr", "ggformula", "ggplot2", "knitr", "lazyeval", "mosaicCore", "testthat", "tibble", "tidyr", "tidyverse"] }, "mosqcontrol": { "name": "mosqcontrol", "version": "0.1.0", "sha256": "199rkfisagr4kfx358f8yrbls00fng0kq8siyrbfwwf8qrba9fla", - "depends": ["assertthat", "magrittr", "NlcOptim", "nloptr", "pracma", "sfsmisc"] + "depends": ["NlcOptim", "assertthat", "magrittr", "nloptr", "pracma", "sfsmisc"] }, "mosum": { "name": "mosum", "version": "1.2.7", "sha256": "1zixjf3s381d44s63qzz4hpx4cd2d3rgzvzgg75gpzfkvxnf5f8c", - "depends": ["plot3D", "RColorBrewer", "Rcpp"] + "depends": ["RColorBrewer", "Rcpp", "plot3D"] }, "motif": { "name": "motif", "version": "0.6.4", "sha256": "0khvplcnw868cspzvn3mimvsvygxaw7ay6py2da9pjzmcbij9g36", - "depends": ["comat", "philentropy", "Rcpp", "RcppArmadillo", "sf", "stars", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "comat", "philentropy", "sf", "stars", "tibble"] }, "motifcluster": { "name": "motifcluster", "version": "0.2.3", "sha256": "1ynfjz9di1f1cm6bmx81a8mzkjkhclk21mx8b6css953dih06ngb", - "depends": ["igraph", "Matrix", "RSpectra"] + "depends": ["Matrix", "RSpectra", "igraph"] }, "motifr": { "name": "motifr", "version": "1.0.0", "sha256": "01synariq39mzhx12jbcpwn982piakakl97sgs33xa8xrbwzcxgm", - "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "intergraph", "network", "purrr", "RColorBrewer", "reshape2", "reticulate", "rlang", "scales", "tibble", "tidygraph"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "ggraph", "igraph", "intergraph", "network", "purrr", "reshape2", "reticulate", "rlang", "scales", "tibble", "tidygraph"] }, "motmot": { "name": "motmot", "version": "2.1.3", "sha256": "09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq", - "depends": ["ape", "caper", "coda", "ks", "mvtnorm", "Rcpp"] + "depends": ["Rcpp", "ape", "caper", "coda", "ks", "mvtnorm"] }, "motoRneuron": { "name": "motoRneuron", @@ -84893,7 +85787,7 @@ "name": "mousetrap", "version": "3.2.3", "sha256": "05dxbzwghm8gj6jwwy9wyz0xwyrj614x7db00zlb3gwz1kkyd9sz", - "depends": ["cstab", "diptest", "dplyr", "fastcluster", "fields", "ggplot2", "lifecycle", "magrittr", "pracma", "psych", "RColorBrewer", "Rcpp", "rlang", "scales", "tidyr"] + "depends": ["RColorBrewer", "Rcpp", "cstab", "diptest", "dplyr", "fastcluster", "fields", "ggplot2", "lifecycle", "magrittr", "pracma", "psych", "rlang", "scales", "tidyr"] }, "movMF": { "name": "movMF", @@ -84905,7 +85799,7 @@ "name": "move", "version": "4.2.4", "sha256": "1i6qyx4i8vb2g7i8c2hwjia81m2wd3pyvp6hf6f64j4lcrnafqz7", - "depends": ["geosphere", "httr", "memoise", "raster", "Rcpp", "sp", "terra", "xml2"] + "depends": ["Rcpp", "geosphere", "httr", "memoise", "raster", "sp", "terra", "xml2"] }, "move2": { "name": "move2", @@ -84917,19 +85811,19 @@ "name": "moveHMM", "version": "1.9", "sha256": "0dq6p13rfv0dryl323zqc0ix12vzn0qaykb9qnxiipwvj0j3qmz2", - "depends": ["boot", "CircStats", "geosphere", "ggmap", "ggplot2", "MASS", "numDeriv", "Rcpp", "RcppArmadillo", "sp"] + "depends": ["CircStats", "MASS", "Rcpp", "RcppArmadillo", "boot", "geosphere", "ggmap", "ggplot2", "numDeriv", "sp"] }, "moveWindSpeed": { "name": "moveWindSpeed", "version": "0.2.4", "sha256": "0gj8qivwgxh9xzyfldb5hqmd8qi2q9xcazdl9iz39fxvwdshravz", - "depends": ["move", "Rcpp"] + "depends": ["Rcpp", "move"] }, "movecost": { "name": "movecost", "version": "2.1", "sha256": "1rq0q8myszcssdxn77lrf7z6yisc5318k32qxaj98rpggr7pfs93", - "depends": ["chron", "elevatr", "gdistance", "Matrix", "raster", "sf", "sp", "terra"] + "depends": ["Matrix", "chron", "elevatr", "gdistance", "raster", "sf", "sp", "terra"] }, "movegroup": { "name": "movegroup", @@ -84941,13 +85835,13 @@ "name": "movementsync", "version": "0.1.4", "sha256": "132m7df76hj96xpbh1k9s1p8j8jy51mv9v6xrlm35kgwxgk912zk", - "depends": ["circular", "dplyr", "ggplot2", "gridExtra", "hms", "igraph", "lmtest", "osfr", "rlang", "scales", "signal", "tidyr", "WaveletComp", "zoo"] + "depends": ["WaveletComp", "circular", "dplyr", "ggplot2", "gridExtra", "hms", "igraph", "lmtest", "osfr", "rlang", "scales", "signal", "tidyr", "zoo"] }, "movieROC": { "name": "movieROC", - "version": "0.1.0", - "sha256": "1afdb2hb3cmbfgx70xnm1xzjsk855847824qrfaa4ldh9hg403yb", - "depends": ["animation", "e1071", "gtools", "intrval", "ks", "rms", "robustbase", "Rsolnp", "zoo"] + "version": "0.1.1", + "sha256": "0znqdqdl7hszg0q9a5sbaj5m9h0lglk33jrxbvfhyw1dfkg29v93", + "depends": ["Rsolnp", "animation", "e1071", "gtools", "intrval", "ks", "rms", "robustbase", "zoo"] }, "mp": { "name": "mp", @@ -84959,19 +85853,19 @@ "name": "mpae", "version": "0.1.2", "sha256": "0a6fbnqvp0fhbni0qivnrcdmbvlzy6biv5qgk9d13ydqaz15vbms", - "depends": ["caret", "RcmdrMisc"] + "depends": ["RcmdrMisc", "caret"] }, "mpath": { "name": "mpath", - "version": "0.4-2.25", - "sha256": "1131bmp0jqz846snjbg57pd8kmn2jynz4xsck119qxspclw476ab", - "depends": ["bst", "doParallel", "foreach", "glmnet", "MASS", "numDeriv", "pamr", "pscl", "WeightSVM"] + "version": "0.4-2.26", + "sha256": "1pzmcp3kznkfi0bh7pcpgciwla3wgzbb2h1mrngfd1pmm3406pvr", + "depends": ["MASS", "WeightSVM", "bst", "doParallel", "foreach", "glmnet", "numDeriv", "pscl"] }, "mpathsenser": { "name": "mpathsenser", "version": "1.2.3", "sha256": "12hhcw76gn7mfd3xjsb7an7bwz95any8l89pglrk0bmj8iwhsns2", - "depends": ["DBI", "dbplyr", "dplyr", "furrr", "jsonlite", "lifecycle", "lubridate", "purrr", "rlang", "RSQLite", "tibble", "tidyr"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "furrr", "jsonlite", "lifecycle", "lubridate", "purrr", "rlang", "tibble", "tidyr"] }, "mpindex": { "name": "mpindex", @@ -84995,7 +85889,7 @@ "name": "mplusParallel.automation", "version": "0.0.1.1", "sha256": "012zbd09vqln1xb8lj6akiv1nyhiayiwiwbk8q70yv1mfpj5jgpm", - "depends": ["dplyr", "furrr", "future", "MplusAutomation"] + "depends": ["MplusAutomation", "dplyr", "furrr", "future"] }, "mpm": { "name": "mpm", @@ -85017,9 +85911,9 @@ }, "mpmsim": { "name": "mpmsim", - "version": "2.0.0", - "sha256": "040zbjp95yvl3zwiixjd93yzqgzny8qyy8dyrjfp8rqcr9i8g3q1", - "depends": ["dplyr", "ggplot2", "popbio", "popdemo", "Rcompadre", "reshape"] + "version": "3.0.0", + "sha256": "1bbbprdx2z7sm6m6419vcd4kz194p98n3xrk1y918jas5mi75i95", + "depends": ["Rage", "Rcompadre", "dplyr", "ggplot2", "popbio", "popdemo", "reshape"] }, "mpoly": { "name": "mpoly", @@ -85031,13 +85925,13 @@ "name": "mpower", "version": "0.1.0", "sha256": "0bg2q6dgnh17v5rwa50qj6yivn902p34nmpkbvqhn7qsf45vadmf", - "depends": ["abind", "boot", "doSNOW", "dplyr", "foreach", "ggplot2", "magrittr", "MASS", "purrr", "reshape2", "rlang", "sbgcop", "snow", "tibble", "tidyr", "tidyselect"] + "depends": ["MASS", "abind", "boot", "doSNOW", "dplyr", "foreach", "ggplot2", "magrittr", "purrr", "reshape2", "rlang", "sbgcop", "snow", "tibble", "tidyr", "tidyselect"] }, "mppR": { "name": "mppR", "version": "1.5.0", "sha256": "0ghpsckphrhnjdsxjvbq9v5c3mdpkq14wp9m7g7w9gf5izpa989s", - "depends": ["dplyr", "ggplot2", "igraph", "Matrix", "nlme", "qtl"] + "depends": ["Matrix", "dplyr", "ggplot2", "igraph", "nlme", "qtl"] }, "mpr": { "name": "mpr", @@ -85061,7 +85955,7 @@ "name": "mpwR", "version": "0.1.5", "sha256": "16j81a4minl8710fl32k05g4xcpii7r3jqzypkmvxyhrb1mdvc1q", - "depends": ["comprehenr", "data_table", "dplyr", "flowTraceR", "forcats", "ggplot2", "magrittr", "plotly", "purrr", "stringr", "tibble", "tidyr", "UpSetR"] + "depends": ["UpSetR", "comprehenr", "data_table", "dplyr", "flowTraceR", "forcats", "ggplot2", "magrittr", "plotly", "purrr", "stringr", "tibble", "tidyr"] }, "mr_pivw": { "name": "mr.pivw", @@ -85079,13 +85973,13 @@ "name": "mrMLM", "version": "5.0.1", "sha256": "0z2vwvpc7yrxza3jy3x3mj7d3n10bfbq72rcsnrjrz2jkcbkwb8g", - "depends": ["BEDMatrix", "coin", "data_table", "doParallel", "foreach", "lars", "ncvreg", "Rcpp", "RcppEigen", "sampling", "sbl"] + "depends": ["BEDMatrix", "Rcpp", "RcppEigen", "coin", "data_table", "doParallel", "foreach", "lars", "ncvreg", "sampling", "sbl"] }, "mrMLM_GUI": { "name": "mrMLM.GUI", "version": "4.0.2", "sha256": "0ywxaw164czfgbnqfkh5zw06006clisbc780w2h4z71wfvj56dsi", - "depends": ["bigmemory", "coin", "data_table", "doParallel", "foreach", "lars", "mrMLM", "ncvreg", "Rcpp", "RcppEigen", "sampling", "sbl", "shiny", "shinyjs"] + "depends": ["Rcpp", "RcppEigen", "bigmemory", "coin", "data_table", "doParallel", "foreach", "lars", "mrMLM", "ncvreg", "sampling", "sbl", "shiny", "shinyjs"] }, "mra": { "name": "mra", @@ -85097,13 +85991,13 @@ "name": "mratios", "version": "1.4.2", "sha256": "18pi0dks0qmw0gv76yqm4gvxdqrcvr25j1vb8k4mkp5p35kzkzff", - "depends": ["multcomp", "mvtnorm", "survival", "survPresmooth"] + "depends": ["multcomp", "mvtnorm", "survPresmooth", "survival"] }, "mrbayes": { "name": "mrbayes", "version": "0.5.1", "sha256": "11n3d18di01vmwqs5a0i1h8839aammzbcavi1jk58bmrwb3l771j", - "depends": ["BH", "plyr", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "plyr", "rstan", "rstantools"] }, "mrbin": { "name": "mrbin", @@ -85115,19 +86009,19 @@ "name": "mrbsizeR", "version": "1.3", "sha256": "150ipzlkfzl3dpl4pkjdnrcxr82x9pb2rzhmgl3f02xd35x6am5z", - "depends": ["fields", "maps", "Rcpp"] + "depends": ["Rcpp", "fields", "maps"] }, "mrct": { "name": "mrct", "version": "0.0.1.0", "sha256": "0sgdkkg7x3zly7s35gz7mz79wrwlvnrp8mm7rabqs2lw7lc93lza", - "depends": ["fda", "fdapace", "ggplot2", "Rdpack", "reshape2", "robustbase"] + "depends": ["Rdpack", "fda", "fdapace", "ggplot2", "reshape2", "robustbase"] }, "mrds": { "name": "mrds", "version": "2.3.0", "sha256": "1arp1nk393wbbvasvsp3mb08lbvl3y38bw06sxyk148za3lnhkhq", - "depends": ["mgcv", "numDeriv", "optimx", "Rsolnp"] + "depends": ["Rsolnp", "mgcv", "numDeriv", "optimx"] }, "mreg": { "name": "mreg", @@ -85145,19 +86039,19 @@ "name": "mrf2d", "version": "1.0", "sha256": "0fmxn178bkw77iz51bnjxala9xmhs44km57m8msvlw0k69sddyif", - "depends": ["dplyr", "ggplot2", "Rcpp", "RcppArmadillo", "Rdpack", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "dplyr", "ggplot2", "tidyr"] }, "mrfDepth": { "name": "mrfDepth", "version": "1.0.17", "sha256": "05k7pzjry3dd7api52wlybl7k83jq0v6a306sdl9wcsqv95lw0mc", - "depends": ["abind", "geometry", "ggplot2", "matrixStats", "Rcpp", "RcppArmadillo", "RcppEigen", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "abind", "geometry", "ggplot2", "matrixStats", "reshape2"] }, "mrfse": { "name": "mrfse", "version": "0.4.1", "sha256": "1kk6j7x4z4vaiwnd2mv2brzd1z7g4kyxxylxf31971i6klnsn4zb", - "depends": ["gtools", "Rcpp", "Rfast"] + "depends": ["Rcpp", "Rfast", "gtools"] }, "mrgsim_parallel": { "name": "mrgsim.parallel", @@ -85173,9 +86067,9 @@ }, "mrgsolve": { "name": "mrgsolve", - "version": "1.4.1", - "sha256": "035k5qlpkxyn2fj5kc9i0kfbmdan33mjw9ig8rg5mibsgw5r0iry", - "depends": ["BH", "dplyr", "glue", "lifecycle", "magrittr", "Rcpp", "RcppArmadillo", "rlang", "tibble", "tidyselect"] + "version": "1.5.1", + "sha256": "0bzvzj346ssys7wl7pb0mddg8k0la2sw0q2dxapwvlmasbj4x81g", + "depends": ["BH", "Rcpp", "RcppArmadillo", "dplyr", "glue", "lifecycle", "magrittr", "rlang", "tibble", "tidyselect"] }, "mri": { "name": "mri", @@ -85199,7 +86093,7 @@ "name": "mrregression", "version": "1.0.0", "sha256": "1yy2sjs0b67bqyggzypp2g7x4fdmi86jx2nbcp2n7hcf9cdacysi", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "msBP": { "name": "msBP", @@ -85241,7 +86135,7 @@ "name": "msaenet", "version": "3.1.2", "sha256": "1gs5mcwdkc3wwaa49liywsrl8454801i6jiylfksyw1rlqlcnz9p", - "depends": ["foreach", "glmnet", "Matrix", "mvtnorm", "ncvreg", "survival"] + "depends": ["Matrix", "foreach", "glmnet", "mvtnorm", "ncvreg", "survival"] }, "msamp": { "name": "msamp", @@ -85307,7 +86201,7 @@ "name": "mseapca", "version": "2.0.3", "sha256": "0kmli8dmkv7dacb52dz84plhr4ncagch2kzh61amhga4chwqhwzq", - "depends": ["loadings", "XML"] + "depends": ["XML", "loadings"] }, "msentropy": { "name": "msentropy", @@ -85367,7 +86261,7 @@ "name": "msltrend", "version": "1.0", "sha256": "1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx", - "depends": ["changepoint", "forecast", "plyr", "Rssa", "tseries", "zoo"] + "depends": ["Rssa", "changepoint", "forecast", "plyr", "tseries", "zoo"] }, "msm": { "name": "msm", @@ -85385,7 +86279,7 @@ "name": "msme", "version": "0.5.3", "sha256": "0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh", - "depends": ["lattice", "MASS"] + "depends": ["MASS", "lattice"] }, "msmtools": { "name": "msmtools", @@ -85399,11 +86293,17 @@ "sha256": "1fg9q6269cckn4g6isv22k22mzglxhjxjg5npqsikmisribmr9kb", "depends": ["mclust", "tree"] }, + "mssearchr": { + "name": "mssearchr", + "version": "0.1.1", + "sha256": "0w5i2vcnargw8z80sgmh0qrb5sdv5s3fi3b05qvyc0mx0k6b77lh", + "depends": ["Rcpp"] + }, "mstDIF": { "name": "mstDIF", "version": "0.1.7", "sha256": "0krb3g1njm97cnjjhc2p5r8djgnzarn5gm65x76h1k43qxfb5iw1", - "depends": ["eRm", "expm", "Matrix", "mirt", "PP", "scDIFtest"] + "depends": ["Matrix", "PP", "eRm", "expm", "mirt", "scDIFtest"] }, "mstR": { "name": "mstR", @@ -85413,9 +86313,9 @@ }, "mstate": { "name": "mstate", - "version": "0.3.2", - "sha256": "054dzrd5b0xjjjl7862q3aq1jwgrxbkqz7zpvbdirqsld3zksirw", - "depends": ["data_table", "lattice", "RColorBrewer", "rlang", "survival", "viridisLite"] + "version": "0.3.3", + "sha256": "0vxfayp9d21hgihrb3bfn04y76qgvqx0mcwbw5w6izpbqcwxlcw5", + "depends": ["RColorBrewer", "data_table", "lattice", "rlang", "survival", "viridisLite"] }, "mstclustering": { "name": "mstclustering", @@ -85427,7 +86327,7 @@ "name": "mstherm", "version": "0.4.7", "sha256": "04jrp0w17svwmrvx356jmh04npbwhk9nvfy3r39vqr82yrvn6jip", - "depends": ["doParallel", "foreach", "nls2", "plotrix", "RColorBrewer"] + "depends": ["RColorBrewer", "doParallel", "foreach", "nls2", "plotrix"] }, "mstknnclust": { "name": "mstknnclust", @@ -85439,13 +86339,13 @@ "name": "mstrio", "version": "11.3.5.101", "sha256": "103xpkcahp3rzw01yb1qmymavl40xzydmn0z6ya2mcxihzfdf2k3", - "depends": ["crul", "data_table", "httr", "jsonlite", "markdown", "openssl", "R6", "rstudioapi", "shiny", "shinyjs", "vctrs"] + "depends": ["R6", "crul", "data_table", "httr", "jsonlite", "markdown", "openssl", "rstudioapi", "shiny", "shinyjs", "vctrs"] }, "mstudentd": { "name": "mstudentd", - "version": "1.0.0", - "sha256": "03css731hv96nj8y07y4ngzv97fypiqcfynscxw5fx0s05c51331", - "depends": ["MASS", "rgl"] + "version": "1.1.1", + "sha256": "0s5kidcz6sv9gaa0mdx2lawn79qd1y5j3vpr76bpv91fibfpzpa6", + "depends": ["MASS", "data_table", "rgl"] }, "msu": { "name": "msu", @@ -85457,7 +86357,7 @@ "name": "mt", "version": "2.0-1.20", "sha256": "12r7hs83ijn7vw1qqgfrmd5ff7x6p3hxmaxnr3bjr5h2gd6sj42l", - "depends": ["class", "e1071", "ellipse", "lattice", "latticeExtra", "MASS", "pls", "randomForest"] + "depends": ["MASS", "class", "e1071", "ellipse", "lattice", "latticeExtra", "pls", "randomForest"] }, "mtanan": { "name": "mtanan", @@ -85467,9 +86367,9 @@ }, "mtarm": { "name": "mtarm", - "version": "0.1.1", - "sha256": "1zmqpaw7yirs62xg20vfp6m481089651z5qhr52lqsqy537z2vby", - "depends": ["coda", "Formula", "GIGrvg"] + "version": "0.1.2", + "sha256": "19830spz9r1bj520vkafiq3inb45ydzwx6fjaa2vadr6mxr7b2l0", + "depends": ["Formula", "GIGrvg", "coda"] }, "mtb": { "name": "mtb", @@ -85481,7 +86381,7 @@ "name": "mtdesign", "version": "0.1.0", "sha256": "0fnyw6zcls12b6mmr9pxj3b9vs8pv1ik3h671kmxfgv1k6dwn6b9", - "depends": ["BH", "dplyr", "ggplot2", "logger", "magrittr", "Rcpp", "rlang", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "dplyr", "ggplot2", "logger", "magrittr", "rlang", "tibble", "tidyr"] }, "mthapower": { "name": "mthapower", @@ -85569,9 +86469,9 @@ }, "mulea": { "name": "mulea", - "version": "1.0.0", - "sha256": "07rhgf0qiwjxr0ckyizyry0vk33jfl2zh3lqipg0rc6s083shgv3", - "depends": ["data_table", "dplyr", "fgsea", "ggplot2", "ggraph", "magrittr", "plyr", "Rcpp", "readr", "rlang", "scales", "stringi", "tibble", "tidygraph", "tidyverse"] + "version": "1.0.1", + "sha256": "0mgwhf24raycj01cyw835a843pgfi7nkhzjj73ln3xhkk42np3km", + "depends": ["Rcpp", "data_table", "dplyr", "fgsea", "ggplot2", "ggraph", "magrittr", "plyr", "readr", "rlang", "scales", "stringi", "tibble", "tidygraph", "tidyverse"] }, "mulgar": { "name": "mulgar", @@ -85611,15 +86511,15 @@ }, "multbxxc": { "name": "multbxxc", - "version": "1.0.2", - "sha256": "1g8m3mgqfvqf097rd3v78575gci77gphygjv66n0nlnv06hqrhr1", + "version": "1.0.3", + "sha256": "0pb8pf66jribf1riyzsv9snmhvf3vivzklkmfhzadgrs72sxlgw4", "depends": ["Rcpp", "RcppArmadillo", "rmumps"] }, "multcomp": { "name": "multcomp", - "version": "1.4-25", - "sha256": "10njzzxdi3jw5f419s7chcynxkzyqmmvzf7jk7ybdrwrlqhpiylx", - "depends": ["codetools", "mvtnorm", "sandwich", "survival", "TH_data"] + "version": "1.4-26", + "sha256": "1v3979my2yzpqc5lrx7fy72765j2cw1giv4xlpwrr2zvmzgvn051", + "depends": ["TH_data", "codetools", "mvtnorm", "sandwich", "survival"] }, "multcompView": { "name": "multcompView", @@ -85629,8 +86529,8 @@ }, "multe": { "name": "multe", - "version": "1.0.0", - "sha256": "05hp59lsf0zdbp6lkyf9yq1i0isi68zgqwxxkssgw4r6w5yfh84g", + "version": "1.1.0", + "sha256": "1827787d3prv94asyqw4h91z7w9k5yzp0d79afxrnp3b9q9vp5v3", "depends": ["nnet"] }, "multfisher": { @@ -85643,7 +86543,7 @@ "name": "multgee", "version": "1.9.0", "sha256": "0hjlnmnn18cf2blcr23y8vc2l6zaqfi8223nfwm2bx3arslj41xn", - "depends": ["gnm", "Rcpp", "RcppArmadillo", "VGAM"] + "depends": ["Rcpp", "RcppArmadillo", "VGAM", "gnm"] }, "multiActionButton": { "name": "multiActionButton", @@ -85679,13 +86579,13 @@ "name": "multiDimBio", "version": "1.2.2", "sha256": "0xadpvnyghpqh2q1gp1fqwv591sm3icmx60x4g8gn1vybi51k5rx", - "depends": ["ggplot2", "gridGraphics", "lme4", "MASS", "misc3d", "pcaMethods", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "ggplot2", "gridGraphics", "lme4", "misc3d", "pcaMethods"] }, "multiFANOVA": { "name": "multiFANOVA", "version": "0.1.0", "sha256": "03dx08rpp2h6mwbdcsgsmyjmbslva3578yif298zc9r7v5j6d0rr", - "depends": ["doParallel", "fda", "foreach", "GFDmcv", "MASS", "Matrix"] + "depends": ["GFDmcv", "MASS", "Matrix", "doParallel", "fda", "foreach"] }, "multiMarker": { "name": "multiMarker", @@ -85709,31 +86609,31 @@ "name": "multiUS", "version": "1.2.3", "sha256": "0wdvrkl6xvk8xpkm9n0hd5pjks3350ms09jrfqnnxyf3dsbs68dc", - "depends": ["gplots", "MASS"] + "depends": ["MASS", "gplots"] }, "multibias": { "name": "multibias", - "version": "1.5.0", - "sha256": "171fag2qx8vbydcajai2dq50l9hrhsrlifrni87b07pzsm6bv7nc", + "version": "1.5.1", + "sha256": "16fbrc2phljrvmlraii31g16z41lid9x9s5sw1d03v6vzgca09aj", "depends": ["dplyr", "magrittr", "rlang"] }, "multibiasmeta": { "name": "multibiasmeta", "version": "0.2.2", "sha256": "04qnb3l2y86xy8f1j754g8fy6hc1a26rwdznaka789k3dkkckk93", - "depends": ["dplyr", "EValue", "metabias", "metafor", "purrr", "Rdpack", "rlang", "robumeta"] + "depends": ["EValue", "Rdpack", "dplyr", "metabias", "metafor", "purrr", "rlang", "robumeta"] }, "multibiplotGUI": { "name": "multibiplotGUI", "version": "1.1", "sha256": "08vmdhrn6qqq57q818cqnmsw7qaa4gnw3m5myzp4dc85njgzzi02", - "depends": ["cluster", "dendroextras", "MASS", "Matrix", "plotrix", "rgl", "shapes", "tcltk2", "tkrplot"] + "depends": ["MASS", "Matrix", "cluster", "dendroextras", "plotrix", "rgl", "shapes", "tcltk2", "tkrplot"] }, "multiblock": { "name": "multiblock", "version": "0.8.8.1", "sha256": "0b4xk6pr4ffs44iras74mswligfyrx52fgm5yvcs5f4y94bsd6pp", - "depends": ["ade4", "car", "lme4", "MASS", "mixlm", "plotrix", "pls", "plsVarSel", "pracma", "progress", "Rcpp", "RcppEigen", "RSpectra", "SSBtools"] + "depends": ["MASS", "RSpectra", "Rcpp", "RcppEigen", "SSBtools", "ade4", "car", "lme4", "mixlm", "plotrix", "pls", "plsVarSel", "pracma", "progress"] }, "multibreakeR": { "name": "multibreakeR", @@ -85745,7 +86645,7 @@ "name": "multibridge", "version": "1.2.0", "sha256": "0akl9i3fhgd0pqsvgp7cv2l2l84cqc3cc4lambnjmwdyh7x4qcvd", - "depends": ["Brobdingnag", "coda", "magrittr", "mvtnorm", "progress", "purrr", "Rcpp", "Rdpack", "stringr"] + "depends": ["Brobdingnag", "Rcpp", "Rdpack", "coda", "magrittr", "mvtnorm", "progress", "purrr", "stringr"] }, "multicastR": { "name": "multicastR", @@ -85755,9 +86655,9 @@ }, "multichull": { "name": "multichull", - "version": "1.0.1", - "sha256": "1ghkyypp7pij62iz33di6af27hkvy5rfrh6hpms21v4a43z2ljb7", - "depends": ["igraph", "plotly", "shiny", "shinythemes"] + "version": "3.0.0", + "sha256": "17c2hwgnlw67s2209ran6gz0mdg66kzxzp6d484dp53gggnpdw0l", + "depends": ["DT", "igraph", "plotly", "shiny", "shinythemes"] }, "multiclassPairs": { "name": "multiclassPairs", @@ -85787,13 +86687,13 @@ "name": "multidplyr", "version": "0.1.3", "sha256": "18yl24s1g8wf3xi6f0k7jhs99ka4dslxf5p9ax9m5l1rbva5xdwj", - "depends": ["callr", "cli", "crayon", "dplyr", "magrittr", "qs", "R6", "rlang", "tibble", "tidyselect", "vctrs"] + "depends": ["R6", "callr", "cli", "crayon", "dplyr", "magrittr", "qs", "rlang", "tibble", "tidyselect", "vctrs"] }, "multifamm": { "name": "multifamm", "version": "0.1.1", "sha256": "09s6hnyi5x48yp97499zai7b959ylkk17zbbc6d8a71ynvfas8ir", - "depends": ["data_table", "funData", "MFPCA", "mgcv", "sparseFLMM", "zoo"] + "depends": ["MFPCA", "data_table", "funData", "mgcv", "sparseFLMM", "zoo"] }, "multifear": { "name": "multifear", @@ -85805,7 +86705,7 @@ "name": "multifunc", "version": "0.9.4", "sha256": "0gxgxfh8vmczc7dc4awfmmmwds98kk9d5c9rk1lz1himp19mqsj4", - "depends": ["broom", "dplyr", "magrittr", "MASS", "purrr"] + "depends": ["MASS", "broom", "dplyr", "magrittr", "purrr"] }, "multifwf": { "name": "multifwf", @@ -85835,7 +86735,7 @@ "name": "multilevLCA", "version": "1.5.1", "sha256": "0cf51abcypl3a3xl0lhvb614ja83s6nkcc0glws9x112wwm2dgs4", - "depends": ["dplyr", "foreach", "klaR", "magrittr", "MASS", "Rcpp", "RcppArmadillo", "tidyr"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "dplyr", "foreach", "klaR", "magrittr", "tidyr"] }, "multilevel": { "name": "multilevel", @@ -85847,25 +86747,25 @@ "name": "multilevelPSA", "version": "1.2.5", "sha256": "0926jaicdxk846vyfphb2hyg3zan3wal44x1bwamws0zf4flc4hj", - "depends": ["ggplot2", "MASS", "party", "plyr", "PSAgraphics", "psych", "reshape", "xtable"] + "depends": ["MASS", "PSAgraphics", "ggplot2", "party", "plyr", "psych", "reshape", "xtable"] }, "multilevelTools": { "name": "multilevelTools", "version": "0.1.1", "sha256": "01fzx7j0mkb4fr7axv34184w6w5nfsdcr51nscci1mi5b2805x1s", - "depends": ["cowplot", "data_table", "extraoperators", "ggplot2", "JWileymisc", "lavaan", "lme4", "lmerTest", "nlme", "zoo"] + "depends": ["JWileymisc", "cowplot", "data_table", "extraoperators", "ggplot2", "lavaan", "lme4", "lmerTest", "nlme", "zoo"] }, "multilevelcoda": { "name": "multilevelcoda", - "version": "1.3.0", - "sha256": "1hmnapmcaa1m56afvx3ylikii462fhq8qy64xs0a8gpkg9d5ir0v", - "depends": ["abind", "bayesplot", "bayestestR", "brms", "bslib", "compositions", "data_table", "doFuture", "DT", "extraoperators", "foreach", "future", "ggplot2", "hrbrthemes", "insight", "loo", "plotly", "shiny", "shinystan"] + "version": "1.3.0.2", + "sha256": "0dd31bs1wfwfmi65aj8ycmipyszpl79cik5z2w7rkii4pl1zc6ja", + "depends": ["DT", "abind", "bayesplot", "bayestestR", "brms", "bslib", "compositions", "data_table", "doFuture", "emmeans", "extraoperators", "foreach", "future", "ggplot2", "hrbrthemes", "insight", "loo", "plotly", "shiny", "shinystan"] }, "multilevelmediation": { "name": "multilevelmediation", "version": "0.3.1", "sha256": "0aq38qz4i05sn3qa1f0lwpf57r4aya30i028gfdj66w0nh766pg0", - "depends": ["brms", "furrr", "future", "matrixcalc", "MCMCpack", "nlme", "parallelly", "posterior", "tidyr"] + "depends": ["MCMCpack", "brms", "furrr", "future", "matrixcalc", "nlme", "parallelly", "posterior", "tidyr"] }, "multilevelmod": { "name": "multilevelmod", @@ -85883,13 +86783,13 @@ "name": "multilink", "version": "0.1.1", "sha256": "0bjsmr8ca8c3vhq8p8sadn5l4xns5isssmsvi47i3l96j51g7das", - "depends": ["geosphere", "igraph", "mcclust", "Rcpp", "RcppArmadillo", "RecordLinkage", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "RecordLinkage", "geosphere", "igraph", "mcclust", "stringr"] }, "multimark": { "name": "multimark", "version": "2.1.6", "sha256": "14zgp3pqxmfjxf78rfr92qd3gjyzfrx5sbid3gcg14bsnpyhkns4", - "depends": ["Brobdingnag", "coda", "Matrix", "mvtnorm", "prodlim", "raster", "RMark", "sp", "statmod"] + "depends": ["Brobdingnag", "Matrix", "RMark", "coda", "mvtnorm", "prodlim", "raster", "sp", "statmod"] }, "multimix": { "name": "multimix", @@ -85913,43 +86813,43 @@ "name": "multiness", "version": "1.0.2", "sha256": "08bgjs2mrmsdvha10dr74262yk5ghyflvs8pqbl7bc8aws7lv8f5", - "depends": ["glmnet", "Matrix", "RSpectra"] + "depends": ["Matrix", "RSpectra", "glmnet"] }, "multinet": { "name": "multinet", - "version": "4.1.2", - "sha256": "0i87r6k6pzr7gbspcq9d101gwnnlwqpr0y4s1dgqsa2abivk0p55", - "depends": ["igraph", "RColorBrewer", "Rcpp"] + "version": "4.2", + "sha256": "1rrb03nl658r28sjn4d1g7hdwz5jsg8hgwhygy79xfsqf1pykmy8", + "depends": ["RColorBrewer", "Rcpp", "igraph"] }, "multinets": { "name": "multinets", "version": "0.2.2", "sha256": "1i5jsq1xy0g0l5d1z3hz4gj6inj4rhd6lf2s5xzd5k8ccp5aba8c", - "depends": ["igraph", "Rcpp"] + "depends": ["Rcpp", "igraph"] }, "multinma": { "name": "multinma", "version": "0.7.1", "sha256": "0p0bw7kz1i7bnmwzyzn7gbblpq05rf2axcklppj9h072ysh1x7mn", - "depends": ["bayesplot", "BH", "copula", "dplyr", "forcats", "ggdist", "ggplot2", "ggraph", "glue", "igraph", "Matrix", "purrr", "randtoolbox", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rlang", "rstan", "rstantools", "StanHeaders", "stringr", "survival", "tibble", "tidyr", "truncdist"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "bayesplot", "copula", "dplyr", "forcats", "ggdist", "ggplot2", "ggraph", "glue", "igraph", "purrr", "randtoolbox", "rlang", "rstan", "rstantools", "stringr", "survival", "tibble", "tidyr", "truncdist"] }, "multinomialLogitMix": { "name": "multinomialLogitMix", "version": "1.1", "sha256": "11mv9xsixcjqv3cq5ay1id3736gzdk192cw2z9khlv1j9bf1x4xh", - "depends": ["coda", "doParallel", "foreach", "ggplot2", "label_switching", "MASS", "matrixStats", "mvtnorm", "RColorBrewer", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "RColorBrewer", "Rcpp", "RcppArmadillo", "coda", "doParallel", "foreach", "ggplot2", "label_switching", "matrixStats", "mvtnorm"] }, "multinomineq": { "name": "multinomineq", "version": "0.2.6", "sha256": "0ip5ax1s7bk98hq9yqvhx0hiawxbac901zw41v0issq302dhvylk", - "depends": ["coda", "quadprog", "Rcpp", "RcppArmadillo", "RcppProgress", "RcppXPtrUtils", "Rglpk"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "RcppXPtrUtils", "Rglpk", "coda", "quadprog"] }, "multiocc": { "name": "multiocc", "version": "0.2.1", "sha256": "1ndwky6rjyb7x0mg2xx5lsxr5yyhg7a9jrwmwryjg6jsw23965qx", - "depends": ["coda", "interp", "MASS", "tmvtnorm", "truncnorm"] + "depends": ["MASS", "coda", "interp", "tmvtnorm", "truncnorm"] }, "multipanelfigure": { "name": "multipanelfigure", @@ -85961,7 +86861,7 @@ "name": "multipleDL", "version": "1.0.0", "sha256": "0b8858w0g45xkhschg742kxicd1cp4xhfacn0q3yh17k2fcif7r3", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "SparseM", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "SparseM", "StanHeaders", "rstan", "rstantools"] }, "multipleNCC": { "name": "multipleNCC", @@ -85983,8 +86883,8 @@ }, "multiplex": { "name": "multiplex", - "version": "3.1.1", - "sha256": "0y7bcqdma20ca4a7f20kwrhji7mc1rris31kqfb3ps7zwj9bkp3h", + "version": "3.4", + "sha256": "00dxlign3l34vjjpzasj6jiyzr53lppq7hw5xb5rm9zqiw31cd2w", "depends": [] }, "multipol": { @@ -86019,9 +86919,9 @@ }, "multisite_accuracy": { "name": "multisite.accuracy", - "version": "1.2", - "sha256": "1hj1gjc8833np9cahpw1f1p2yg95xx32rbzj6l9sc65dv5ncq5jf", - "depends": ["AROC", "coxme", "lme4", "lmerTest", "logistf", "metafor", "pROC", "survival"] + "version": "1.3", + "sha256": "0d2i34pphvilzmjvqpxnp76d2dzy4ncg6xvxdg7752gcnp5j1mvl", + "depends": ["coxme", "lme4", "lmerTest", "logistf", "metafor", "pROC", "survival"] }, "multisom": { "name": "multisom", @@ -86045,25 +86945,25 @@ "name": "multitool", "version": "0.1.4", "sha256": "1z8yby5prfmp0p9gia8pmr54sw017rqbpblhxk6qxz3w9vnl4zp8", - "depends": ["clipr", "correlation", "DiagrammeR", "dplyr", "flextable", "furrr", "future", "ggdist", "ggplot2", "glue", "lme4", "moments", "parameters", "performance", "purrr", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["DiagrammeR", "clipr", "correlation", "dplyr", "flextable", "furrr", "future", "ggdist", "ggplot2", "glue", "lme4", "moments", "parameters", "performance", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "multivar": { "name": "multivar", "version": "1.1.0", "sha256": "1jyz921m16g24gjmscsz2mi78ng3c5hzhbcankdq9x1i7kdcqawi", - "depends": ["ggplot2", "glmnet", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "reshape2", "vars"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "glmnet", "reshape2", "vars"] }, "multivariance": { "name": "multivariance", "version": "2.4.1", "sha256": "1jbv1rhdy6jgvyhwz25hry3xmnxfsl8pwf0j4rj9r8rg6ik8rv1w", - "depends": ["igraph", "microbenchmark", "Rcpp"] + "depends": ["Rcpp", "igraph", "microbenchmark"] }, "multivarious": { "name": "multivarious", "version": "0.2.0", "sha256": "1lgb7agfdq4fiwg2c2f6an2bx7krl84n79d7744rc514rgl0klp0", - "depends": ["chk", "corpcor", "fitdistrplus", "glmnet", "irlba", "Matrix", "matrixStats", "pls", "proxy", "purrr", "rlang", "RSpectra", "rsvd", "svd"] + "depends": ["Matrix", "RSpectra", "chk", "corpcor", "fitdistrplus", "glmnet", "irlba", "matrixStats", "pls", "proxy", "purrr", "rlang", "rsvd", "svd"] }, "multivator": { "name": "multivator", @@ -86075,13 +86975,13 @@ "name": "multiverse", "version": "0.6.1", "sha256": "0l3h4pg450brw27n0jhc3k5fsl57kczxsmzzs3ffj9lwrpnvvn7z", - "depends": ["berryFunctions", "collections", "dplyr", "evaluate", "formatR", "future_apply", "knitr", "magrittr", "purrr", "R6", "rlang", "rstudioapi", "tibble", "tidyr", "tidyselect"] + "depends": ["R6", "berryFunctions", "collections", "dplyr", "evaluate", "formatR", "future_apply", "knitr", "magrittr", "purrr", "rlang", "rstudioapi", "tibble", "tidyr", "tidyselect"] }, "multiview": { "name": "multiview", "version": "0.8", "sha256": "1kf16w4wbj84383hvqxhrqlvghyra22p7k9vs03axqxqkhl8krhz", - "depends": ["glmnet", "Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "survival"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "RcppEigen", "glmnet", "survival"] }, "multiwave": { "name": "multiwave", @@ -86177,7 +87077,7 @@ "name": "mutossGUI", "version": "0.1-12", "sha256": "13mq7yjbvnfgmiss95wxys3scmrb6b036g8rcxs1rn1q5wy3sg7b", - "depends": ["CommonJavaJars", "JavaGD", "JGR", "multcomp", "mutoss", "plotrix", "rJava"] + "depends": ["CommonJavaJars", "JGR", "JavaGD", "multcomp", "mutoss", "plotrix", "rJava"] }, "mutualinf": { "name": "mutualinf", @@ -86189,13 +87089,13 @@ "name": "mvDFA", "version": "0.0.4", "sha256": "118m08j6d8vwpk04g6prqmcxc899v2a8mbs59j53cs612aipk0vp", - "depends": ["deSolve", "longmemo", "mvtnorm", "pbapply", "pracma", "RobPer"] + "depends": ["RobPer", "deSolve", "longmemo", "mvtnorm", "pbapply", "pracma"] }, "mvGPS": { "name": "mvGPS", "version": "1.2.2", "sha256": "1aanrv84c012ijyqql0pw2qlckrpv3wmfv16yhr465xb3rkzz4vj", - "depends": ["CBPS", "cobalt", "gbm", "geometry", "MASS", "matrixNormal", "Rdpack", "sp", "WeightIt"] + "depends": ["CBPS", "MASS", "Rdpack", "WeightIt", "cobalt", "gbm", "geometry", "matrixNormal", "sp"] }, "mvLSW": { "name": "mvLSW", @@ -86213,13 +87113,13 @@ "name": "mvMAPIT", "version": "2.0.3", "sha256": "1ab4snxbw9p80cs7d6fnxl7cv20l1h2b243q2nj50yh6xirx2a0h", - "depends": ["checkmate", "CompQuadForm", "dplyr", "foreach", "harmonicmeanp", "logging", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppProgress", "RcppSpdlog", "testthat", "tidyr"] + "depends": ["CompQuadForm", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppProgress", "RcppSpdlog", "checkmate", "dplyr", "foreach", "harmonicmeanp", "logging", "mvtnorm", "testthat", "tidyr"] }, "mvMISE": { "name": "mvMISE", "version": "1.0", "sha256": "0lnc5g3ksl5cvwylh8p8baxyvq3z32a2i337q7lhg00j031ccy5c", - "depends": ["lme4", "MASS"] + "depends": ["MASS", "lme4"] }, "mvMORPH": { "name": "mvMORPH", @@ -86237,7 +87137,7 @@ "name": "mvPot", "version": "0.1.6", "sha256": "18cx02wg6nkgmh2ba2gp37z838xr70w354wbkfgl5jnyirl5g9xz", - "depends": ["evd", "gmp", "MASS", "numbers"] + "depends": ["MASS", "evd", "gmp", "numbers"] }, "mvProbit": { "name": "mvProbit", @@ -86255,13 +87155,13 @@ "name": "mvSLOUCH", "version": "2.7.6", "sha256": "1l11dza28m5l6iam90z2vvmpabp91s3rmnb7b1x78c77ss1r7gig", - "depends": ["abind", "ape", "Matrix", "matrixcalc", "mvtnorm", "ouch", "PCMBase"] + "depends": ["Matrix", "PCMBase", "abind", "ape", "matrixcalc", "mvtnorm", "ouch"] }, "mvSUSY": { "name": "mvSUSY", "version": "0.1.0", "sha256": "1yvgx439m37ifdviaiykhpxrfw7k43dnvpxc56532w7vwxbvpcd7", - "depends": ["data_table", "ggplot2", "ggsci", "RcppAlgos"] + "depends": ["RcppAlgos", "data_table", "ggplot2", "ggsci"] }, "mvShapiroTest": { "name": "mvShapiroTest", @@ -86291,13 +87191,13 @@ "name": "mvctm", "version": "1.2", "sha256": "0810bmk748cvbls4djspqvkk65j605djqicqg4rkwy2a799l3rgc", - "depends": ["Formula", "MNM", "nlme", "quantreg", "Rfit", "SpatialNP"] + "depends": ["Formula", "MNM", "Rfit", "SpatialNP", "nlme", "quantreg"] }, "mvdalab": { "name": "mvdalab", "version": "1.7", "sha256": "0iblpg5yi9ig4hi6ff84m9pfgyrpkyfc9m9m98dpngpbhxfqnvhq", - "depends": ["car", "ggplot2", "MASS", "moments", "penalized", "plyr", "reshape2", "sn"] + "depends": ["MASS", "car", "ggplot2", "moments", "penalized", "plyr", "reshape2", "sn"] }, "mverse": { "name": "mverse", @@ -86307,9 +87207,9 @@ }, "mvgam": { "name": "mvgam", - "version": "1.1.1", - "sha256": "1hgrhly2wsrmsgbd888sx38hyl44bgicw54z8bgf4i54n4mmw8ph", - "depends": ["bayesplot", "brms", "dplyr", "ggplot2", "insight", "loo", "magrittr", "marginaleffects", "Matrix", "matrixStats", "mgcv", "mvnfast", "pbapply", "posterior", "purrr", "Rcpp", "RcppArmadillo", "rlang", "rstan", "rstantools", "scoringRules", "smooth", "zoo"] + "version": "1.1.2", + "sha256": "1cbqz680844zjd0girpivig11infzn417cra3r87yg0iai7cz5zd", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "bayesplot", "brms", "dplyr", "ggplot2", "insight", "loo", "magrittr", "marginaleffects", "mgcv", "mvnfast", "pbapply", "posterior", "purrr", "rlang", "rstan", "rstantools", "smooth", "zoo"] }, "mvgb": { "name": "mvgb", @@ -86327,13 +87227,13 @@ "name": "mvhist", "version": "1.1", "sha256": "057yhkivcfjm9yazx0x8rn2xysgyc6y7nlcxpjl00yfi7wcjpmlh", - "depends": ["mvmesh", "rcdd", "rgl", "SimplicialCubature"] + "depends": ["SimplicialCubature", "mvmesh", "rcdd", "rgl"] }, "mvhtests": { "name": "mvhtests", "version": "1.0", "sha256": "1820d8gd2rmszqp3kd5d01c5v2znxm1l6dm7cjr4mn51v1rxzhhk", - "depends": ["doParallel", "emplik", "foreach", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "doParallel", "emplik", "foreach"] }, "mvinfluence": { "name": "mvinfluence", @@ -86345,7 +87245,7 @@ "name": "mvmesh", "version": "1.6", "sha256": "1y6p7xp9fv0xswjdc6py1xqlx1ys1iyr559s9wkyja4hzcpya2my", - "depends": ["abind", "geometry", "rcdd", "rgl", "SimplicialCubature"] + "depends": ["SimplicialCubature", "abind", "geometry", "rcdd", "rgl"] }, "mvmeta": { "name": "mvmeta", @@ -86381,7 +87281,7 @@ "name": "mvnimpute", "version": "1.0.1", "sha256": "0131dm8ma7qrzqsfdkdcp1vh0jcz3am3mry6x96m8fm3npi4dldz", - "depends": ["ggplot2", "LaplacesDemon", "MASS", "Rcpp", "RcppArmadillo", "RcppDist", "reshape2", "rlang", "truncnorm"] + "depends": ["LaplacesDemon", "MASS", "Rcpp", "RcppArmadillo", "RcppDist", "ggplot2", "reshape2", "rlang", "truncnorm"] }, "mvnmle": { "name": "mvnmle", @@ -86409,9 +87309,9 @@ }, "mvord": { "name": "mvord", - "version": "1.2.2", - "sha256": "15ln55a1lxpfka4lva84nsznbl8wgi95hvbr8wisqh05c5940s3x", - "depends": ["BB", "dfoptim", "MASS", "Matrix", "minqa", "mnormt", "mvtnorm", "numDeriv", "optimx", "pbivnorm", "ucminf"] + "version": "1.2.4", + "sha256": "0hxgz5gjrvapfdjyf5w9wcankbwkd32ii291nzmlh8n8gb7pr067", + "depends": ["BB", "MASS", "Matrix", "dfoptim", "minqa", "mnormt", "mvtnorm", "numDeriv", "optimx", "pbivnorm", "ucminf"] }, "mvoutlier": { "name": "mvoutlier", @@ -86423,13 +87323,13 @@ "name": "mvp", "version": "1.0-14", "sha256": "0dzf5h5ng0vx6nw8j8q9ydksicyxy940p363n367gbs56c8x47dk", - "depends": ["digest", "disordR", "magic", "magrittr", "mpoly", "numbers", "partitions", "Rcpp"] + "depends": ["Rcpp", "digest", "disordR", "magic", "magrittr", "mpoly", "numbers", "partitions"] }, "mvpd": { "name": "mvpd", "version": "0.0.4", "sha256": "10k82g2izv72k99j99mjljg2hxb66pzhgfqal2j5z3cj3gmkjabg", - "depends": ["cubature", "libstable4u", "Matrix", "matrixStats", "mvtnorm", "stabledist"] + "depends": ["Matrix", "cubature", "libstable4u", "matrixStats", "mvtnorm", "stabledist"] }, "mvrsquared": { "name": "mvrsquared", @@ -86457,27 +87357,27 @@ }, "mvtnorm": { "name": "mvtnorm", - "version": "1.2-5", - "sha256": "19pdwdkhc7bv6r9xkzpxmpgmz7mvsrzxfvj6jy02hpjdlaiq4y4y", + "version": "1.2-6", + "sha256": "0cfdd8l58yn48vc4zf4n5vfs3g02wdnvmkdf5zyybn3f54ydrpn4", "depends": [] }, "mvtsplot": { "name": "mvtsplot", - "version": "1.0-4", - "sha256": "1391m4r58hbaqbq46isi15jx6vhx7frdspbs1ippbpw7rsanch9w", + "version": "1.0-5", + "sha256": "0n7lfxr3hq32fpg0vv9v0426k4dlgadfcjrjg7kj3abahykx7zl9", "depends": ["RColorBrewer"] }, "mwTensor": { "name": "mwTensor", "version": "1.1.0", "sha256": "113asdl3hm1kk31x29x89bz3zxccrhbh64xl2fcgds1mkw0gr3mn", - "depends": ["ccTensor", "igraph", "iTensor", "MASS", "nnTensor", "rTensor"] + "depends": ["MASS", "ccTensor", "iTensor", "igraph", "nnTensor", "rTensor"] }, "mwa": { "name": "mwa", "version": "0.4.4", "sha256": "0f994xpylqhhwwr3rv0y5y68989ssy7q4pb3hawq0ww0l3wj9lmd", - "depends": ["cem", "MASS", "rJava"] + "depends": ["MASS", "cem", "rJava"] }, "mwlaxeref": { "name": "mwlaxeref", @@ -86495,7 +87395,7 @@ "name": "mxfda", "version": "0.2.1", "sha256": "0msfkyxdyy8p3rwxqyzqy9jmsjnv3ra7qspm1cfql3azpmhs8k4s", - "depends": ["dplyr", "ggplot2", "lifecycle", "magrittr", "mgcv", "purrr", "refund", "reshape2", "rlang", "SimDesign", "SpatEntropy", "spatstat_explore", "spatstat_geom", "tidyr"] + "depends": ["SimDesign", "SpatEntropy", "dplyr", "ggplot2", "lifecycle", "magrittr", "mgcv", "purrr", "refund", "reshape2", "rlang", "spatstat_explore", "spatstat_geom", "tidyr"] }, "mxkssd": { "name": "mxkssd", @@ -86513,13 +87413,13 @@ "name": "mxnorm", "version": "1.0.3", "sha256": "01845m5h4rd38n0fll2k2d9hw6j9dbjgs7kmwy30g9lkffvv73s8", - "depends": ["caret", "data_table", "dplyr", "e1071", "fda", "fossil", "ggplot2", "glue", "KernSmooth", "kSamples", "lme4", "magrittr", "psych", "reticulate", "rlang", "stringr", "tidyr", "uwot"] + "depends": ["KernSmooth", "caret", "data_table", "dplyr", "e1071", "fda", "fossil", "ggplot2", "glue", "kSamples", "lme4", "magrittr", "psych", "reticulate", "rlang", "stringr", "tidyr", "uwot"] }, "mxsem": { "name": "mxsem", - "version": "0.0.9", - "sha256": "1n8dwb41gr2z8sjrkf0f75mcrvigr5p9p399s5bbi74kf9dsw0hr", - "depends": ["dplyr", "OpenMx", "Rcpp"] + "version": "0.1.0", + "sha256": "0mhy8nbg9xagsdacyy1q0ri0j6jdsidsmcx12k736axi0805x0m1", + "depends": ["OpenMx", "Rcpp", "dplyr"] }, "myCRAN": { "name": "myCRAN", @@ -86537,7 +87437,7 @@ "name": "myTAI", "version": "0.9.3", "sha256": "0fd6srvwzqir8zif56cnyi02c952fgc67xzc17wn7xvmvljfvh4x", - "depends": ["cpp11", "doParallel", "dplyr", "edgeR", "fitdistrplus", "foreach", "ggplot2", "gridExtra", "nortest", "RColorBrewer", "Rcpp", "RcppArmadillo", "readr", "reshape2", "scales", "taxize", "tibble"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "cpp11", "doParallel", "dplyr", "edgeR", "fitdistrplus", "foreach", "ggplot2", "gridExtra", "nortest", "readr", "reshape2", "scales", "taxize", "tibble"] }, "mycobacrvR": { "name": "mycobacrvR", @@ -86567,7 +87467,7 @@ "name": "nFactors", "version": "2.4.1.1", "sha256": "08gydk231zijw3inp6d3hnc5mz0zywi4vzlvqb4jmibhv0hncdxv", - "depends": ["lattice", "MASS", "psych"] + "depends": ["MASS", "lattice", "psych"] }, "nFunNN": { "name": "nFunNN", @@ -86603,7 +87503,7 @@ "name": "naaccr", "version": "2.0.2", "sha256": "1j30fb7qvxzpx0y7hq8sbqvszwjfnc4r2g0j8885fmn2wxvcgzdx", - "depends": ["data_table", "stringi", "XML"] + "depends": ["XML", "data_table", "stringi"] }, "nabor": { "name": "nabor", @@ -86627,13 +87527,13 @@ "name": "naijR", "version": "0.6.0", "sha256": "1108fz4rhckmb2d9s63rjb44dpfazhvhsqprgx82akbssr7xf9br", - "depends": ["cli", "lifecycle", "mapdata", "maps", "RColorBrewer", "rlang", "sf", "stringi"] + "depends": ["RColorBrewer", "cli", "lifecycle", "mapdata", "maps", "rlang", "sf", "stringi"] }, "naive": { "name": "naive", "version": "1.2.3", "sha256": "0ha54lc6g6yvh5g3kw5hdp2l7y2xi85b3ills3w1x092gma1q2cy", - "depends": ["entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "philentropy", "purrr", "readr", "Rfast", "scales", "tictoc"] + "depends": ["Rfast", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "philentropy", "purrr", "readr", "scales", "tictoc"] }, "naivebayes": { "name": "naivebayes", @@ -86663,7 +87563,7 @@ "name": "namedropR", "version": "2.4.1", "sha256": "06lg381imi8xnm6jlsxfffjyhzban6z29zwkw8bamglnk0frvzza", - "depends": ["bib2df", "dplyr", "htmltools", "lubridate", "qrcode", "R_utils", "readr", "stringr", "webshot"] + "depends": ["R_utils", "bib2df", "dplyr", "htmltools", "lubridate", "qrcode", "readr", "stringr", "webshot"] }, "namer": { "name": "namer", @@ -86681,13 +87581,13 @@ "name": "nandb", "version": "2.1.0", "sha256": "1rbn4nibjzvwpccpmqn84w9a167f1avyl18kjlapy5dhafvixgbz", - "depends": ["assertthat", "autothresholdr", "BBmisc", "checkmate", "detrendr", "dplyr", "filesstrings", "ggplot2", "glue", "ijtiff", "magrittr", "purrr", "Rcpp", "reshape2", "rlang", "stringr", "viridis", "withr"] + "depends": ["BBmisc", "Rcpp", "assertthat", "autothresholdr", "checkmate", "detrendr", "dplyr", "filesstrings", "ggplot2", "glue", "ijtiff", "magrittr", "purrr", "reshape2", "rlang", "stringr", "viridis", "withr"] }, "naniar": { "name": "naniar", "version": "1.1.0", "sha256": "0i3gijr1l7hbcp75cyj26pxmm493lnvasl8aba9vv4w8lz1lck59", - "depends": ["cli", "dplyr", "forcats", "ggplot2", "glue", "lifecycle", "magrittr", "norm", "purrr", "rlang", "tibble", "tidyr", "UpSetR", "vctrs", "viridis", "visdat"] + "depends": ["UpSetR", "cli", "dplyr", "forcats", "ggplot2", "glue", "lifecycle", "magrittr", "norm", "purrr", "rlang", "tibble", "tidyr", "vctrs", "viridis", "visdat"] }, "nanoarrow": { "name": "nanoarrow", @@ -86697,14 +87597,14 @@ }, "nanonext": { "name": "nanonext", - "version": "1.1.0", - "sha256": "1j0xiww92kasy3ks3mrwxqk8gbfwqzyqnmanbcjswa4xiycqzsgv", - "depends": ["later"] + "version": "1.2.0", + "sha256": "1gqgrkl3px5s25qfqzd39x442nlls6s0hqwr5q6l92c95yfz14xx", + "depends": [] }, "nanoparquet": { "name": "nanoparquet", - "version": "0.3.0", - "sha256": "1q7msg1jc6mggggzm3sfcq7s6n8x0llmb7qbggqci4zai45dpj6b", + "version": "0.3.1", + "sha256": "179bl9pzhklnlp0mnid2166mswznh702rshbp2m6vaacr4ky4w9i", "depends": [] }, "nanostringr": { @@ -86715,9 +87615,9 @@ }, "nanotime": { "name": "nanotime", - "version": "0.3.7", - "sha256": "05fbdhbax6k1glidmgl0zjc7y7v1ppbpz4422q3jmxmfack7hwd7", - "depends": ["bit64", "Rcpp", "RcppCCTZ", "RcppDate", "zoo"] + "version": "0.3.9", + "sha256": "1n3rz8zvrq5kxkfiv4gc64lmn72fm2jjgb9f2j23my38zpnnaafc", + "depends": ["Rcpp", "RcppCCTZ", "RcppDate", "bit64", "zoo"] }, "naptanr": { "name": "naptanr", @@ -86735,13 +87635,13 @@ "name": "nardl", "version": "0.1.6", "sha256": "1vf8im4zs4j0v3k617aaskq9n2fg8sn3j5bllcbz2ircrpijr21m", - "depends": ["car", "Formula", "gtools", "MASS", "strucchange", "tseries"] + "depends": ["Formula", "MASS", "car", "gtools", "strucchange", "tseries"] }, "narray": { "name": "narray", "version": "0.5.1", "sha256": "0vpx1fl24ba1c5x3bw0n8bx5yp77gsqybaxgbq6mj6by29ggq73l", - "depends": ["progress", "Rcpp", "stringr"] + "depends": ["Rcpp", "progress", "stringr"] }, "naryn": { "name": "naryn", @@ -86767,11 +87667,17 @@ "sha256": "05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb", "depends": [] }, + "nascaR_data": { + "name": "nascaR.data", + "version": "1.0.0", + "sha256": "0hipjm9xxskmb8qvipvsiry5qmfpw7blnyip9ldx3xnjik7lx87c", + "depends": [] + }, "naspaclust": { "name": "naspaclust", "version": "0.2.1", "sha256": "1p4ilv2z5140h4kdix2w1v32vz1n8v33wq0fhc8n8mi7baknhd1i", - "depends": ["beepr", "rdist", "Rdpack", "stabledist"] + "depends": ["Rdpack", "beepr", "rdist", "stabledist"] }, "nat": { "name": "nat", @@ -86789,7 +87695,7 @@ "name": "nat.templatebrains", "version": "1.1", "sha256": "13fwh9lqd7yz3j8ndhx650a6mf5hn2f0w3lqfha24vb2zrv0crsg", - "depends": ["digest", "igraph", "memoise", "Morpho", "nat", "rappdirs", "rgl"] + "depends": ["Morpho", "digest", "igraph", "memoise", "nat", "rappdirs", "rgl"] }, "nat_utils": { "name": "nat.utils", @@ -86819,19 +87725,19 @@ "name": "natstrat", "version": "2.0.0", "sha256": "1i3qjd787clbafpkjd0mkp6i540061q9xl9kxlgh9f517ksg8zpz", - "depends": ["caret", "ggplot2", "plyr", "pps", "ramify", "Rglpk", "rlang", "sampling", "slam"] + "depends": ["Rglpk", "caret", "ggplot2", "plyr", "pps", "ramify", "rlang", "sampling", "slam"] }, "naturaList": { "name": "naturaList", "version": "0.5.2", "sha256": "0fh4cx7zh0kr0flvlfafxwxr9j74d9h74vpfa8mbn2ibgz63j65p", - "depends": ["dplyr", "fasterize", "htmltools", "leaflet", "leaflet_extras", "magrittr", "raster", "rlang", "sf", "shiny", "shinydashboard", "shinyWidgets", "sp", "stringi", "stringr", "tidytext", "tm", "vegan"] + "depends": ["dplyr", "fasterize", "htmltools", "leaflet", "leaflet_extras", "magrittr", "raster", "rlang", "sf", "shiny", "shinyWidgets", "shinydashboard", "sp", "stringi", "stringr", "tidytext", "tm", "vegan"] }, "natural": { "name": "natural", "version": "0.9.0", "sha256": "0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx", - "depends": ["glmnet", "Matrix"] + "depends": ["Matrix", "glmnet"] }, "naturalsort": { "name": "naturalsort", @@ -86843,7 +87749,7 @@ "name": "navigation", "version": "0.0.1", "sha256": "129f2snh2mjp9mcifcxzh37zjhny8wlqhq00225pakl79kfzyyim", - "depends": ["expm", "leaflet", "magrittr", "MASS", "pbmcapply", "plotly", "rbenchmark", "Rcpp", "RcppArmadillo", "simts"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "expm", "leaflet", "magrittr", "pbmcapply", "plotly", "rbenchmark", "simts"] }, "navigatr": { "name": "navigatr", @@ -86897,7 +87803,7 @@ "name": "nbfar", "version": "0.1", "sha256": "1gr9q83ff950x2lcyv9apsnjah4kpi8805mci9m0s3gvr7llpjq4", - "depends": ["glmnet", "magrittr", "MASS", "mpath", "Rcpp", "RcppArmadillo", "RcppParallel", "rrpack"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "RcppParallel", "glmnet", "magrittr", "mpath", "rrpack"] }, "nblR": { "name": "nblR", @@ -86921,7 +87827,7 @@ "name": "ncappc", "version": "0.3.0", "sha256": "0bf00iskrd3x43839bwn957mi3qvm2dhcmqa7hl1ib0gp2r1cnzx", - "depends": ["bookdown", "Cairo", "dplyr", "ggplot2", "gridExtra", "gtable", "knitr", "lazyeval", "magrittr", "PopED", "purrr", "readr", "reshape2", "rlang", "rmarkdown", "scales", "tibble", "tidyr", "xtable"] + "depends": ["Cairo", "PopED", "bookdown", "dplyr", "ggplot2", "gridExtra", "gtable", "knitr", "lazyeval", "magrittr", "purrr", "readr", "reshape2", "rlang", "rmarkdown", "scales", "tibble", "tidyr", "xtable"] }, "ncar": { "name": "ncar", @@ -86937,15 +87843,15 @@ }, "ncdf4": { "name": "ncdf4", - "version": "1.22", - "sha256": "040jpcgsb98s6knch0z3f3f5fpmlwks1grpvb9k8s02c9w0a5adr", + "version": "1.23", + "sha256": "12fsjjc769hw7fc08yglr3gaxp67s8qx1mbx91g61h4xyzlzw1cb", "depends": [] }, "ncdf4_helpers": { "name": "ncdf4.helpers", "version": "0.3-6", "sha256": "0qnm41rbxb6v7aqh1mdkjhcc2rhs4wg6wmrllldzd99mzz8slv1r", - "depends": ["abind", "ncdf4", "PCICt"] + "depends": ["PCICt", "abind", "ncdf4"] }, "ncdfCF": { "name": "ncdfCF", @@ -86957,7 +87863,7 @@ "name": "ncdfgeom", "version": "1.1.6", "sha256": "1scbcysklqi761xbjxkdb54m3k31hps58lyg2l01m9pk117ywkz5", - "depends": ["areal", "dplyr", "ncmeta", "RNetCDF", "sf", "stars"] + "depends": ["RNetCDF", "areal", "dplyr", "ncmeta", "sf", "stars"] }, "ncdump": { "name": "ncdump", @@ -86975,13 +87881,13 @@ "name": "ncmeta", "version": "0.4.0", "sha256": "1aamxs3yza1hsgvkp6740lv1dc21a87mzl06n6w3zxkjshri020w", - "depends": ["CFtime", "dplyr", "rlang", "RNetCDF", "tibble", "tidyr"] + "depends": ["CFtime", "RNetCDF", "dplyr", "rlang", "tibble", "tidyr"] }, "ncodeR": { "name": "ncodeR", "version": "0.2.0.1", "sha256": "1pxiqxhq2rxs8rxxhw1hbds7z2qkf7ws26a8wsbw815yn6jm10n8", - "depends": ["cli", "R6", "rhoR"] + "depends": ["R6", "cli", "rhoR"] }, "ncpen": { "name": "ncpen", @@ -86999,19 +87905,19 @@ "name": "nda", "version": "0.1.13", "sha256": "1v3nfjq0v0vjv3871qsx7sxl5b6p74187cvacj3jfjyxbzghb8pc", - "depends": ["energy", "igraph", "MASS", "Matrix", "ppcor", "psych", "visNetwork"] + "depends": ["MASS", "Matrix", "energy", "igraph", "ppcor", "psych", "visNetwork"] }, "ndi": { "name": "ndi", "version": "0.1.5", "sha256": "0gfjh6wsdcbjw6xyyr863gc7rxridm84d6x05b0yk105yxhi5vpk", - "depends": ["car", "dplyr", "MASS", "Matrix", "psych", "sf", "stringr", "tidycensus", "tidyr"] + "depends": ["MASS", "Matrix", "car", "dplyr", "psych", "sf", "stringr", "tidycensus", "tidyr"] }, "ndjson": { "name": "ndjson", "version": "0.9.0", "sha256": "18j5bibranvbv84hvbsg6glmvhfancdsf2w6j99n3nw53bcgb12d", - "depends": ["data_table", "Rcpp", "tibble"] + "depends": ["Rcpp", "data_table", "tibble"] }, "ndl": { "name": "ndl", @@ -87021,15 +87927,15 @@ }, "ndtv": { "name": "ndtv", - "version": "0.13.3", - "sha256": "05kaqd7p77rfls0s1gqv74j3svh5xdvqni0jin5vxl8y900yc56j", - "depends": ["animation", "base64", "jsonlite", "MASS", "network", "networkDynamic", "sna", "statnet_common"] + "version": "0.13.4", + "sha256": "0s7c5gskndqqy1m1n6a66dpr5krdk1prsgankgkwdbrpraqvi9cr", + "depends": ["MASS", "animation", "base64", "htmlwidgets", "jsonlite", "network", "networkDynamic", "scatterplot3d", "sna", "statnet_common", "tsna"] }, "nearfar": { "name": "nearfar", "version": "1.3", "sha256": "0lzh68dxp7v47j1kk32adcgj9wrvggc6ww9bjizh386y778x290s", - "depends": ["car", "GenSA", "MASS", "nbpMatching"] + "depends": ["GenSA", "MASS", "car", "nbpMatching"] }, "neat": { "name": "neat", @@ -87047,13 +87953,13 @@ "name": "neatRanges", "version": "0.1.4", "sha256": "0673lg8mihz8xwh12q12wfn19w8vvnjb7pnz4x3cn2xhkyzwhxq5", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "neatStats": { "name": "neatStats", "version": "1.13.3", "sha256": "1fj042mwmmjza8giv0f2m7y11j8rnzrcmifyxrv4z9rfqddcvh2s", - "depends": ["BayesFactor", "bayestestR", "car", "data_table", "Exact", "ez", "fBasics", "ggplot2", "ggpubr", "logspline", "MBESS", "pROC", "viridis"] + "depends": ["BayesFactor", "Exact", "MBESS", "bayestestR", "car", "data_table", "ez", "fBasics", "ggplot2", "ggpubr", "logspline", "pROC", "viridis"] }, "neatmaps": { "name": "neatmaps", @@ -87065,13 +87971,13 @@ "name": "nebula", "version": "1.5.3", "sha256": "1al5cw4s2gsjfmrq0pgzz2y3xnvmibma01q8k6923k2wfwgnlkkn", - "depends": ["doFuture", "doRNG", "foreach", "future", "Matrix", "nloptr", "parallelly", "Rcpp", "RcppEigen", "Rfast", "Seurat", "SingleCellExperiment", "trust"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rfast", "Seurat", "SingleCellExperiment", "doFuture", "doRNG", "foreach", "future", "nloptr", "parallelly", "trust"] }, "needmining": { "name": "needmining", "version": "0.1.1", "sha256": "0qsj0ihjchrnl4s44rpsizbcz033z00dmzvic2y1msv0bnfawl6p", - "depends": ["randomForest", "rtweet", "SnowballC", "SparseM", "stringr", "tau", "tm"] + "depends": ["SnowballC", "SparseM", "randomForest", "rtweet", "stringr", "tau", "tm"] }, "needs": { "name": "needs", @@ -87089,7 +87995,7 @@ "name": "negligible", "version": "0.1.8", "sha256": "0ammn1zfzy2q4vd20bj40ix58lz5rkjl7csyp98hq6mq2h091gmv", - "depends": ["DescTools", "dplyr", "e1071", "ez", "fungible", "ggplot2", "lavaan", "MBESS", "nptest", "rockchalk", "WRS2"] + "depends": ["DescTools", "MBESS", "WRS2", "dplyr", "e1071", "ez", "fungible", "ggplot2", "lavaan", "nptest", "rockchalk"] }, "neighbours": { "name": "neighbours", @@ -87131,13 +88037,19 @@ "name": "neo4jshell", "version": "0.1.2", "sha256": "0dkdg8ljyv7pi6zkpsq5akkl35vrhkr78xvc2ky99gwjsr0z77hf", - "depends": ["fs", "magrittr", "R_utils", "ssh", "sys"] + "depends": ["R_utils", "fs", "magrittr", "ssh", "sys"] }, "neo4r": { "name": "neo4r", "version": "0.1.1", "sha256": "0s4rjhn2mc8ca4p8p474a83dc277vrf7l968xwxkiac0d4fgbra7", - "depends": ["attempt", "data_table", "glue", "httr", "igraph", "jsonlite", "magrittr", "purrr", "R6", "rlang", "rstudioapi", "shiny", "tibble", "tidyr", "tidyselect"] + "depends": ["R6", "attempt", "data_table", "glue", "httr", "igraph", "jsonlite", "magrittr", "purrr", "rlang", "rstudioapi", "shiny", "tibble", "tidyr", "tidyselect"] + }, + "neodistr": { + "name": "neodistr", + "version": "0.1.1", + "sha256": "1g27z8qnk98fgblpprvb55lfly79dcfa9kcfz7rhx1hnarbzf85p", + "depends": ["Rmpfr", "brms", "ggplot2", "plotly", "rstan", "shiny", "shinythemes"] }, "neojags": { "name": "neojags", @@ -87167,13 +88079,19 @@ "name": "neonUtilities", "version": "2.4.2", "sha256": "0mx0pj6zxi0kqn2bqhyrn4bwg9jl151lv3fhk7llswivxp8fzd1p", - "depends": ["curl", "data_table", "downloader", "httr", "jsonlite", "pbapply", "R_utils", "stringr", "tidyr"] + "depends": ["R_utils", "curl", "data_table", "downloader", "httr", "jsonlite", "pbapply", "stringr", "tidyr"] }, "neonstore": { "name": "neonstore", "version": "0.5.1", "sha256": "16xbvqk02ihqv2lilgsmp777v93m2m6px9wcmpg8lm8xhrbyj4gr", - "depends": ["cachem", "DBI", "duckdb", "duckdbfs", "glue", "httr", "memoise", "progress", "R_utils", "thor", "vroom", "zip"] + "depends": ["DBI", "R_utils", "cachem", "duckdb", "duckdbfs", "glue", "httr", "memoise", "progress", "thor", "vroom", "zip"] + }, + "neotoma2": { + "name": "neotoma2", + "version": "1.0.4", + "sha256": "0dhbb7hhbw508mc4zwa2hr5kx5gaz4fj2vp2mrgjqww3dr55c1kp", + "depends": ["assertthat", "dplyr", "geojsonsf", "gtools", "httr", "jsonlite", "leaflet", "lubridate", "magrittr", "progress", "purrr", "rlang", "sf", "stringr", "tidyr", "uuid", "wk"] }, "nephro": { "name": "nephro", @@ -87207,9 +88125,9 @@ }, "nestedcv": { "name": "nestedcv", - "version": "0.7.8", - "sha256": "1pdky7kzqs1rhl0f4hba3sggifplfgbp339imxym4dvvdb81b589", - "depends": ["caret", "data_table", "doParallel", "foreach", "ggplot2", "glmnet", "matrixStats", "matrixTests", "pROC", "Rfast", "RhpcBLASctl", "rlang", "ROCR"] + "version": "0.7.10", + "sha256": "1cfxw9pblrn2f0bw448sxdnj7pb04l1pkfdajzcmg9yn95k1v95b", + "depends": ["ROCR", "Rfast", "RhpcBLASctl", "caret", "data_table", "doParallel", "foreach", "ggplot2", "glmnet", "matrixStats", "matrixTests", "pROC", "rlang"] }, "nestedmodels": { "name": "nestedmodels", @@ -87239,7 +88157,7 @@ "name": "net4pg", "version": "0.1.1", "sha256": "1a00bqskgl053wcwgmg7xsccybrq76bqaipdnf5zbm1dslir0jdv", - "depends": ["data_table", "graph", "magrittr", "Matrix"] + "depends": ["Matrix", "data_table", "graph", "magrittr"] }, "netClust": { "name": "netClust", @@ -87251,25 +88169,25 @@ "name": "netCoin", "version": "2.0.48", "sha256": "03rmi75rjjy03jy0cv6qzz46q06027zvbwy4vp13748vq49aql1s", - "depends": ["GPArotation", "haven", "igraph", "MASS", "Matrix", "rD3plot"] + "depends": ["GPArotation", "MASS", "Matrix", "haven", "igraph", "rD3plot"] }, "netSEM": { "name": "netSEM", "version": "0.6.2", "sha256": "1znb3r8jc1ms4ajzb3ryr89wjx6f3rw1f410msh46d5h08wsjn9n", - "depends": ["DiagrammeR", "DiagrammeRsvg", "gtools", "htmlwidgets", "knitr", "magrittr", "MASS", "png", "rsvg", "segmented", "svglite"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "MASS", "gtools", "htmlwidgets", "knitr", "magrittr", "png", "rsvg", "segmented", "svglite"] }, "netShiny": { "name": "netShiny", "version": "1.0", "sha256": "1k6dmhkjf29ww31c15jms0yxwyiqq1z7a9115zwbg620cjd3m6fm", - "depends": ["colourpicker", "DT", "future", "future_callr", "ggplot2", "ggVennDiagram", "igraph", "ipc", "magrittr", "Matrix", "netgwas", "plotly", "promises", "readxl", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinyjs", "shinyscreenshot", "shinyWidgets", "visNetwork"] + "depends": ["DT", "Matrix", "colourpicker", "future", "future_callr", "ggVennDiagram", "ggplot2", "igraph", "ipc", "magrittr", "netgwas", "plotly", "promises", "readxl", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "shinyscreenshot", "visNetwork"] }, "netUtils": { "name": "netUtils", "version": "0.8.2", "sha256": "0laha093wxkvs06wh2hsmyxypn89n7vlh183zw6k26d67vl15a6j", - "depends": ["igraph", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "igraph"] }, "netassoc": { "name": "netassoc", @@ -87281,43 +88199,37 @@ "name": "netcmc", "version": "1.0.2", "sha256": "0w5xnnfglg0nm59wwqh2dpwkz0zlly3r2997wncf5whz5j4vcy88", - "depends": ["coda", "ggplot2", "MASS", "MCMCpack", "mvtnorm", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "RcppProgress", "coda", "ggplot2", "mvtnorm"] }, "netcom": { "name": "netcom", "version": "2.1.7", "sha256": "1zbpr0bm9g0890isd4x6gfpk6lg5z823q5lym6mhww9gk7b4xl9q", - "depends": ["clue", "doParallel", "dplyr", "expm", "foreach", "GenSA", "ggfortify", "ggplot2", "ggraph", "igraph", "magrittr", "Matrix", "optimx", "pdist", "pracma", "reshape2", "rlang", "tibble", "vegan"] + "depends": ["GenSA", "Matrix", "clue", "doParallel", "dplyr", "expm", "foreach", "ggfortify", "ggplot2", "ggraph", "igraph", "magrittr", "optimx", "pdist", "pracma", "reshape2", "rlang", "tibble", "vegan"] }, "netcontrol": { "name": "netcontrol", "version": "0.1", "sha256": "1gskb728ycnhz9a9g9ghm0dz3ajf3dzgyv23bsk9i01wj9hrxhc0", - "depends": ["expm", "MASS", "Matrix", "pracma", "Rcpp", "RcppArmadillo", "Rdpack"] - }, - "netcox": { - "name": "netcox", - "version": "1.0.1", - "sha256": "04biaynmvqrilp0kdxw55b990j7iqnvn8gr07dhzm9f7r9sr7xk6", - "depends": ["glmnet", "Rcpp", "survival"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "expm", "pracma"] }, "netdiffuseR": { "name": "netdiffuseR", "version": "1.22.6", "sha256": "0f4d0x03970iqxkbr0r9jm8gf28r79rimfnfr1djcajzihxaj7l6", - "depends": ["boot", "igraph", "MASS", "MatchIt", "Matrix", "network", "networkDynamic", "Rcpp", "RcppArmadillo", "sna", "SparseM", "viridisLite"] + "depends": ["MASS", "MatchIt", "Matrix", "Rcpp", "RcppArmadillo", "SparseM", "boot", "igraph", "network", "networkDynamic", "sna", "viridisLite"] }, "netgsa": { "name": "netgsa", "version": "4.0.5", "sha256": "1m9myxsbvbljr038azxzakpbh20a21qhiy20d0ipvjc5asq3kfla", - "depends": ["AnnotationDbi", "corpcor", "data_table", "dplyr", "genefilter", "glassoFast", "glmnet", "graph", "graphite", "httr", "igraph", "magrittr", "Matrix", "msigdbr", "org_Hs_eg_db", "quadprog", "Rcpp", "RcppEigen", "RCy3", "reshape2", "rlang"] + "depends": ["AnnotationDbi", "Matrix", "RCy3", "Rcpp", "RcppEigen", "corpcor", "data_table", "dplyr", "genefilter", "glassoFast", "glmnet", "graph", "graphite", "httr", "igraph", "magrittr", "msigdbr", "org_Hs_eg_db", "quadprog", "reshape2", "rlang"] }, "netgwas": { "name": "netgwas", "version": "1.14.3", "sha256": "1id90w27h6z458ibkndnp7hp6wx0yffq9ywj4b2lkf5g4nwcwz23", - "depends": ["glasso", "huge", "igraph", "MASS", "Matrix", "qtl", "tmvtnorm"] + "depends": ["MASS", "Matrix", "glasso", "huge", "igraph", "qtl", "tmvtnorm"] }, "netie": { "name": "netie", @@ -87333,15 +88245,15 @@ }, "netmediate": { "name": "netmediate", - "version": "0.1.4", - "sha256": "17h2nc9ixfi7ngybinnpm05s41iiwncz53jj90kbvp55qk1a3s2k", - "depends": ["btergm", "ergm", "ergMargins", "gam", "intergraph", "lme4", "MASS", "network", "plm", "plyr", "RSiena", "sna", "VGAM"] + "version": "1.0.1", + "sha256": "1ja5kgnnk6y6c8wav4h29jahpx5p7bsy36qccy2fmn7i5xn7hs7k", + "depends": ["MASS", "RSiena", "VGAM", "btergm", "ergMargins", "ergm", "gam", "intergraph", "lme4", "network", "plm", "plyr", "sna"] }, "netmeta": { "name": "netmeta", "version": "2.9-0", "sha256": "1d7grw2dp4ghh5aapnd1j1w84nixm0vgaca0pchjwjjmg7rdgvad", - "depends": ["ggplot2", "magic", "MASS", "meta", "metafor"] + "depends": ["MASS", "ggplot2", "magic", "meta", "metafor"] }, "netmhc2pan": { "name": "netmhc2pan", @@ -87351,15 +88263,15 @@ }, "netplot": { "name": "netplot", - "version": "0.2-0", - "sha256": "0l4sy8wn2fd04fpkrh853r923dajpqldc78ws4kmh6ixn1l43c21", + "version": "0.3-0", + "sha256": "0bka77jls97xlwmcmzg0rw3y5r9ff6g4ag082vwjc3yrh0nmm29c", "depends": ["igraph", "network", "sna"] }, "netrankr": { "name": "netrankr", "version": "1.2.3", "sha256": "0amvdgj0n32c9f46k0yqkahq2dzicc0522ivh76740l9n1hzbm4v", - "depends": ["igraph", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "igraph"] }, "netregR": { "name": "netregR", @@ -87383,7 +88295,7 @@ "name": "netseer", "version": "0.1.0", "sha256": "0bqwiv7n396myk73rqycx1d4i0nak9gsrda5pxqzr0j82k62vkqx", - "depends": ["dplyr", "fable", "fabletools", "igraph", "lpSolve", "Matrix", "rlang", "tibble", "tidyr", "tsibble"] + "depends": ["Matrix", "dplyr", "fable", "fabletools", "igraph", "lpSolve", "rlang", "tibble", "tidyr", "tsibble"] }, "netseg": { "name": "netseg", @@ -87401,7 +88313,7 @@ "name": "nett", "version": "1.0.0", "sha256": "1prb1zskhc50jzqmh1cdk4lljr4xqp4aaaaw1r66hmpy0d9ghhph", - "depends": ["foreach", "magrittr", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "foreach", "magrittr"] }, "nettskjemar": { "name": "nettskjemar", @@ -87419,7 +88331,7 @@ "name": "networkABC", "version": "0.8-1", "sha256": "0754770z3db7faadh8bxk0h70frjk6v8zjklkhclxnach1vag2k6", - "depends": ["network", "RColorBrewer", "sna"] + "depends": ["RColorBrewer", "network", "sna"] }, "networkD3": { "name": "networkD3", @@ -87455,25 +88367,25 @@ "name": "networkR", "version": "0.1.2", "sha256": "07dq3syk0hr1kc2mqd70g0ih09hamd7rxxms60dyvnpm8978c1wz", - "depends": ["data_table", "fastmatch", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "data_table", "fastmatch"] }, "networkscaleup": { "name": "networkscaleup", "version": "0.1-2", "sha256": "0fvh65750iq2wsjypr35axfdb85ncflc0nmmzl7n5jcyqkfgl5j0", - "depends": ["BH", "LaplacesDemon", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "LaplacesDemon", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "networktools": { "name": "networktools", "version": "1.5.2", "sha256": "0w2q5ncni5nv7lg9vm3bpxj64pg0f6w0rxknli0dy1q0asq4aw47", - "depends": ["cocor", "eigenmodel", "ggplot2", "gridExtra", "igraph", "psych", "qgraph", "R_utils", "RColorBrewer", "reshape2", "smacof", "wordcloud"] + "depends": ["RColorBrewer", "R_utils", "cocor", "eigenmodel", "ggplot2", "gridExtra", "igraph", "psych", "qgraph", "reshape2", "smacof", "wordcloud"] }, "networktree": { "name": "networktree", "version": "1.0.1", "sha256": "0hkrqpx7b6sxalw1qyrncck70mx6p5gr57mf558l5mlqi52v7hg0", - "depends": ["Formula", "gridBase", "Matrix", "mvtnorm", "partykit", "qgraph", "reshape2"] + "depends": ["Formula", "Matrix", "gridBase", "mvtnorm", "partykit", "qgraph", "reshape2"] }, "neuRosim": { "name": "neuRosim", @@ -87497,7 +88409,7 @@ "name": "neurobase", "version": "1.32.4", "sha256": "0jgf7zv4j2r09is0r8fkizgy0mz3c0iyldhw8f1fgys4gwzia7cc", - "depends": ["abind", "matrixStats", "oro_nifti", "R_utils", "RNifti"] + "depends": ["RNifti", "R_utils", "abind", "matrixStats", "oro_nifti"] }, "neuroblastoma": { "name": "neuroblastoma", @@ -87521,7 +88433,13 @@ "name": "neuroim", "version": "0.0.6", "sha256": "00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p", - "depends": ["abind", "assertthat", "hash", "iterators", "Matrix", "Rcpp", "readr", "rgl", "stringr", "yaImpute"] + "depends": ["Matrix", "Rcpp", "abind", "assertthat", "hash", "iterators", "readr", "rgl", "stringr", "yaImpute"] + }, + "neuroimaGene": { + "name": "neuroimaGene", + "version": "0.1.0", + "sha256": "1axdb20zv7y1rkazm6ppmkf09czff2bp2ylcl1ahn5sw5fi7adcc", + "depends": ["DBI", "RSQLite", "data_table", "ggplot2", "ggseg", "stringr"] }, "neuromplex": { "name": "neuromplex", @@ -87545,7 +88463,7 @@ "name": "nevada", "version": "0.2.0", "sha256": "0ba5wbjsgd77f20flp9zqiasmypbxsmqg2yfw0qqwzjrkp3rvfqi", - "depends": ["cli", "dplyr", "flipr", "forcats", "furrr", "ggplot2", "igraph", "magrittr", "purrr", "Rcpp", "RcppArmadillo", "rgeomstats", "rlang", "tibble", "tidyr", "tsne", "umap", "withr"] + "depends": ["Rcpp", "RcppArmadillo", "cli", "dplyr", "flipr", "forcats", "furrr", "ggplot2", "igraph", "magrittr", "purrr", "rgeomstats", "rlang", "tibble", "tidyr", "tsne", "umap", "withr"] }, "neverhpfilter": { "name": "neverhpfilter", @@ -87557,7 +88475,7 @@ "name": "new.dist", "version": "0.1.1", "sha256": "1zkmwqhamrw7g4d1hffsyhcsjf0z0nmmgnixc7wny0qqpmyqlb2n", - "depends": ["expint", "pracma", "VGAM"] + "depends": ["VGAM", "expint", "pracma"] }, "newFocus": { "name": "newFocus", @@ -87569,7 +88487,7 @@ "name": "newIMVC", "version": "0.1.0", "sha256": "1zxdrrc4w93a3r2zibip7s8h75mjf0ir3wpy310s83cas2nywqvx", - "depends": ["CompQuadForm", "expm", "GGMridge", "limma", "quantreg"] + "depends": ["CompQuadForm", "GGMridge", "expm", "limma", "quantreg"] }, "newTestSurvRec": { "name": "newTestSurvRec", @@ -87603,15 +88521,15 @@ }, "nextGenShinyApps": { "name": "nextGenShinyApps", - "version": "2.0", - "sha256": "0994y5qnhxp23c6m08mgr9pp44jcm277qwxzq4fnsdy0gndcjrcw", + "version": "2.1", + "sha256": "1q10qpqwxddq7qi7wjczny3hfkrf0vxvmkb9wxxvsk6k9pn6p5mx", "depends": ["htmltools", "quickcode", "shiny"] }, "nexus": { "name": "nexus", "version": "0.2.0", "sha256": "0dyhgd18kz7yfdziycxkmqb58zx99fr99wxp3dfjfxip537sx1sn", - "depends": ["arkhe", "dimensio", "isopleuros", "MASS"] + "depends": ["MASS", "arkhe", "dimensio", "isopleuros"] }, "nfer": { "name": "nfer", @@ -87639,8 +88557,8 @@ }, "nflreadr": { "name": "nflreadr", - "version": "1.4.0", - "sha256": "1437nzvqj0w5p3wxb0zfwjkn34ssd4q9zbsw0lmrbs0afifaf6dd", + "version": "1.4.1", + "sha256": "0c5vbyh56m8mqlwriw0fzcv1bankg4hb81j98j1wsdg886wiab1m", "depends": ["cachem", "cli", "curl", "data_table", "glue", "memoise", "rappdirs", "rlang"] }, "nflseedR": { @@ -87659,13 +88577,13 @@ "name": "nftbart", "version": "2.1", "sha256": "1vxmjk5bbxyqmrb3mndafcnpx9n8q9rlxm3d1i6fncs78mqqjsnm", - "depends": ["nnet", "Rcpp", "survival"] + "depends": ["Rcpp", "nnet", "survival"] }, "ngboostForecast": { "name": "ngboostForecast", "version": "0.1.1", "sha256": "019l9w7m6lkbf0m9mlsd24agjasbzi7dmy72faq1s4xg49a5xa9a", - "depends": ["dplyr", "forecast", "magrittr", "R6", "reticulate"] + "depends": ["R6", "dplyr", "forecast", "magrittr", "reticulate"] }, "ngram": { "name": "ngram", @@ -87689,7 +88607,7 @@ "name": "ngspatial", "version": "1.2-2", "sha256": "09hdvmbna4m62zv18k5kj9718wzw7p43wnal2j6aa0m5sd2rx9rz", - "depends": ["batchmeans", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "batchmeans"] }, "nhanesA": { "name": "nhanesA", @@ -87707,7 +88625,7 @@ "name": "nhdplusTools", "version": "1.2.1", "sha256": "13jms0cfccydcc5jz2mv6ych8zwsvxf2g6qzspa9vqxyjdq1wzqn", - "depends": ["arrow", "dataRetrieval", "digest", "dplyr", "fst", "httr", "hydroloom", "jsonlite", "magrittr", "mapsf", "maptiles", "memoise", "pbapply", "R_utils", "sf", "tidyr", "units", "xml2", "zip"] + "depends": ["R_utils", "arrow", "dataRetrieval", "digest", "dplyr", "fst", "httr", "hydroloom", "jsonlite", "magrittr", "mapsf", "maptiles", "memoise", "pbapply", "sf", "tidyr", "units", "xml2", "zip"] }, "nhlapi": { "name": "nhlapi", @@ -87725,7 +88643,7 @@ "name": "nhppp", "version": "0.1.4", "sha256": "0822xcv2yq6f12naphh6d29q0215nwamf342fji6nffj6flfhh8d", - "depends": ["lifecycle", "Rcpp", "rstream"] + "depends": ["Rcpp", "lifecycle", "rstream"] }, "nhs_predict": { "name": "nhs.predict", @@ -87799,6 +88717,12 @@ "sha256": "03p0gn6id5bkn0qxf7v3splykpi9wpbasrhf2937gp25bsynrpjm", "depends": [] }, + "nifti_pbcor": { + "name": "nifti.pbcor", + "version": "1.0", + "sha256": "1wlqyxflf7nibx5kik359vn37rf46liklpjmb7sd0972i1dpiaqi", + "depends": [] + }, "nilde": { "name": "nilde", "version": "1.1-7", @@ -87813,9 +88737,9 @@ }, "nimble": { "name": "nimble", - "version": "1.2.0", - "sha256": "16mq49fynkq3ki7g4dv5cxc493gi1sh728jaslzxzh1124n645f4", - "depends": ["coda", "igraph", "numDeriv", "pracma", "R6"] + "version": "1.2.1", + "sha256": "11r5h2v8q4n50i843va2lm5is8cfq5268dyvhkp56xav7vkp319f", + "depends": ["R6", "coda", "igraph", "numDeriv", "pracma"] }, "nimbleAPT": { "name": "nimbleAPT", @@ -87831,14 +88755,14 @@ }, "nimbleEcology": { "name": "nimbleEcology", - "version": "0.4.1", - "sha256": "1z4byxsana1fa2y7qhmiqbb8ana6zbas0cmbgcc703mqh1642jb2", + "version": "0.5.0", + "sha256": "0xnrbkd7q4r6q33vl03i5jzangq05w4q24wrc32f5njlsk10qdbc", "depends": ["nimble"] }, "nimbleHMC": { "name": "nimbleHMC", - "version": "0.2.1", - "sha256": "1id9pqs1phc2vf8mwz2gdgirhmki4shw8h77828nbj10b3zik3zj", + "version": "0.2.2", + "sha256": "0xy8rhpskfb41pa2gsx2qy1bza3rqh5ihiaipc8xpsd2d22c1xnc", "depends": ["nimble"] }, "nimbleNoBounds": { @@ -87917,7 +88841,7 @@ "name": "nlcv", "version": "0.3.5", "sha256": "1ywnm8a13ifqa1bxnf659h1j6mg9iy02vaszyh9p966ps9c1pjab", - "depends": ["a4Core", "Biobase", "e1071", "ipred", "kernlab", "limma", "MASS", "MLInterfaces", "multtest", "pamr", "randomForest", "RColorBrewer", "ROCR", "xtable"] + "depends": ["Biobase", "MASS", "MLInterfaces", "RColorBrewer", "ROCR", "a4Core", "e1071", "ipred", "kernlab", "limma", "multtest", "pamr", "randomForest", "xtable"] }, "nleqslv": { "name": "nleqslv", @@ -87929,7 +88853,7 @@ "name": "nlgm", "version": "1.0", "sha256": "03byqqj8ayq7hbaab4cfrk0nbxmiiq2c2i98szfydzkimhrw922a", - "depends": ["ggplot2", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "ggplot2"] }, "nlist": { "name": "nlist", @@ -87941,12 +88865,12 @@ "name": "nlive", "version": "0.6.0", "sha256": "07an5ds2v7hv15062dcbggdl04b2jqx7mil8a50n6jzdr2x0rb54", - "depends": ["dplyr", "fastDummies", "ggplot2", "knitr", "lcmm", "nlraa", "Rmisc", "saemix", "sitar", "sqldf"] + "depends": ["Rmisc", "dplyr", "fastDummies", "ggplot2", "knitr", "lcmm", "nlraa", "saemix", "sitar", "sqldf"] }, "nlme": { "name": "nlme", - "version": "3.1-165", - "sha256": "16clxh0b8sr2k3vddfip3awimn17ffkd5kwgygi8n4y2jfjbndzw", + "version": "3.1-166", + "sha256": "0qlpj3hjnlvd7x3ayjhvvpxlc2z4bfwk9qpglw8mnxbqipp18yi3", "depends": ["lattice"] }, "nlmeU": { @@ -87959,7 +88883,7 @@ "name": "nlmeVPC", "version": "2.6", "sha256": "0ymiif377c6rjplzvs3s4bgc62ymw2l3cigx8rh779blb0w90qf8", - "depends": ["ggplot2", "Hmisc", "optimx", "quantreg", "Rcpp", "RcppArmadillo", "timeDate"] + "depends": ["Hmisc", "Rcpp", "RcppArmadillo", "ggplot2", "optimx", "quantreg", "timeDate"] }, "nlmixr2": { "name": "nlmixr2", @@ -87977,13 +88901,13 @@ "name": "nlmixr2est", "version": "2.2.2", "sha256": "1g25cqh3yybq9lxbxma3fd11jw1wgpnadxjx78sqqbzwx54xiawf", - "depends": ["backports", "BH", "checkmate", "cli", "knitr", "lbfgsb3c", "lotri", "magrittr", "Matrix", "minqa", "n1qn1", "nlme", "nlmixr2data", "Rcpp", "RcppArmadillo", "rex", "rxode2", "rxode2parse", "rxode2random", "symengine"] + "depends": ["BH", "Matrix", "Rcpp", "RcppArmadillo", "backports", "checkmate", "cli", "knitr", "lbfgsb3c", "lotri", "magrittr", "minqa", "n1qn1", "nlme", "nlmixr2data", "rex", "rxode2", "rxode2parse", "rxode2random", "symengine"] }, "nlmixr2extra": { "name": "nlmixr2extra", "version": "2.0.10", "sha256": "03k8f6v6qqgbl8ngga0n6xyx2kz98xfv6kvi7rad9n90fpdqiaxl", - "depends": ["checkmate", "cli", "crayon", "data_table", "digest", "ggplot2", "ggtext", "knitr", "lotri", "nlme", "nlmixr2est", "Rcpp", "RcppArmadillo", "rxode2", "symengine"] + "depends": ["Rcpp", "RcppArmadillo", "checkmate", "cli", "crayon", "data_table", "digest", "ggplot2", "ggtext", "knitr", "lotri", "nlme", "nlmixr2est", "rxode2", "symengine"] }, "nlmixr2lib": { "name": "nlmixr2lib", @@ -88007,7 +88931,7 @@ "name": "nlmm", "version": "1.1.0", "sha256": "0mi9nsdzsvaxfb3n3z3rijd8saw4l7x3g2gq8ivzxyilyav5anxb", - "depends": ["BH", "gsl", "lqmm", "MASS", "Matrix", "mvtnorm", "nlme", "numDeriv", "Qtools", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["BH", "MASS", "Matrix", "Qtools", "Rcpp", "RcppArmadillo", "gsl", "lqmm", "mvtnorm", "nlme", "numDeriv", "statmod"] }, "nlmrt": { "name": "nlmrt", @@ -88019,7 +88943,7 @@ "name": "nlnet", "version": "1.4", "sha256": "13lv4b6chsjrhimny3wc1y9ljgbxmm1byj4j04n4vj8icn87gyfd", - "depends": ["coin", "e1071", "earth", "fdrtool", "igraph", "randomForest", "ROCR", "TSP"] + "depends": ["ROCR", "TSP", "coin", "e1071", "earth", "fdrtool", "igraph", "randomForest"] }, "nlopt": { "name": "nlopt", @@ -88029,27 +88953,27 @@ }, "nloptr": { "name": "nloptr", - "version": "2.0.3", - "sha256": "1mqnjswm0dl6vqc8b2s5k3n1mhanaha3l33vh68dh6zx8q9aq9kv", - "depends": ["testthat"] + "version": "2.1.1", + "sha256": "1snqvav2pxjhssn1nld49mjj89cn2zv7gjn2y8ch22gbzmfzbnjc", + "depends": [] }, "nlpred": { "name": "nlpred", "version": "1.0.1", "sha256": "05jna8hzd5v36a0dwag6zr8ms1pkryas3qarwb946bkxlslffp27", - "depends": ["assertthat", "bde", "cvAUC", "data_table", "np", "Rdpack", "ROCR", "SuperLearner"] + "depends": ["ROCR", "Rdpack", "SuperLearner", "assertthat", "bde", "cvAUC", "data_table", "np"] }, "nlpsem": { "name": "nlpsem", "version": "0.3", "sha256": "0i6skpmnbi99dkcdam61rq5rfk6wv41q0r1q357qm66wbqyj30fr", - "depends": ["dplyr", "ggplot2", "Matrix", "nnet", "OpenMx", "readr", "stringr", "tidyr"] + "depends": ["Matrix", "OpenMx", "dplyr", "ggplot2", "nnet", "readr", "stringr", "tidyr"] }, "nlraa": { "name": "nlraa", "version": "1.9.7", "sha256": "0xl2vinwj6pclmq1lcyibff0fwr3jnmi96ddgj42vvki19n9c84c", - "depends": ["boot", "knitr", "MASS", "Matrix", "mgcv", "nlme"] + "depends": ["MASS", "Matrix", "boot", "knitr", "mgcv", "nlme"] }, "nlreg": { "name": "nlreg", @@ -88067,7 +88991,7 @@ "name": "nlrx", "version": "0.4.5", "sha256": "046ivv90h0dsk5g2l7mal1cf64ff2y3wmc9h5ql3hffziqs0hd27", - "depends": ["crayon", "dplyr", "EasyABC", "furrr", "genalg", "GenSA", "igraph", "lhs", "magrittr", "progressr", "purrr", "raster", "readr", "rstudioapi", "sensitivity", "sf", "stringr", "tibble", "tidyr", "XML"] + "depends": ["EasyABC", "GenSA", "XML", "crayon", "dplyr", "furrr", "genalg", "igraph", "lhs", "magrittr", "progressr", "purrr", "raster", "readr", "rstudioapi", "sensitivity", "sf", "stringr", "tibble", "tidyr"] }, "nls_multstart": { "name": "nls.multstart", @@ -88077,8 +89001,8 @@ }, "nls2": { "name": "nls2", - "version": "0.3-3", - "sha256": "05miqxfpg29jpf1p3bi347w5565bd3cih8dpvnc3p0i0hcbzmlkl", + "version": "0.3-4", + "sha256": "15wj76sa292i33275g7a32m5kamawx6zjrdmnbpac2mm2byzg9n8", "depends": ["proto"] }, "nlsMicrobio": { @@ -88133,7 +89057,7 @@ "name": "nlt", "version": "2.2-1", "sha256": "10wf00qzf28dxjfvv12wsqxlfn6xz15wk8njrzgsgm9px1g6s21f", - "depends": ["adlift", "EbayesThresh"] + "depends": ["EbayesThresh", "adlift"] }, "nltm": { "name": "nltm", @@ -88157,7 +89081,7 @@ "name": "nmadb", "version": "1.2.0", "sha256": "17r5vc57ilhy6cfcqpfyp9nzzjaa5gc8qkgfn3y8sppqh1g1mi40", - "depends": ["devtools", "jsonlite", "RCurl", "readxl"] + "depends": ["RCurl", "devtools", "jsonlite", "readxl"] }, "nmaplateplot": { "name": "nmaplateplot", @@ -88169,13 +89093,13 @@ "name": "nmarank", "version": "0.3-0", "sha256": "1i2vagjq96q2vhr2lxbm3hqspddfq9qkqjcr8smni6ikmw32akil", - "depends": ["data_tree", "dplyr", "MASS", "meta", "mvtnorm", "netmeta", "rlang", "tibble", "tidyr"] + "depends": ["MASS", "data_tree", "dplyr", "meta", "mvtnorm", "netmeta", "rlang", "tibble", "tidyr"] }, "nmathresh": { "name": "nmathresh", "version": "0.1.6", "sha256": "1jrf7k7an5y867k40aj28ib7vrjyqky2cslwzmfx28snp8ns1vd3", - "depends": ["ggplot2", "gridExtra", "gtable", "Matrix", "nnls"] + "depends": ["Matrix", "ggplot2", "gridExtra", "gtable", "nnls"] }, "nmfbin": { "name": "nmfbin", @@ -88199,7 +89123,7 @@ "name": "nmslibR", "version": "1.0.7", "sha256": "0658j1rir16s84aw7xw698pr8j2xp7j70rd306w04f3dxynsrrqm", - "depends": ["KernelKnn", "lifecycle", "Matrix", "R6", "Rcpp", "RcppArmadillo", "reticulate"] + "depends": ["KernelKnn", "Matrix", "R6", "Rcpp", "RcppArmadillo", "lifecycle", "reticulate"] }, "nmw": { "name": "nmw", @@ -88211,7 +89135,7 @@ "name": "nn2poly", "version": "0.1.1", "sha256": "03p3asvx1913lkmi6f1bq71wxm83qc0lbniv4s9s9fcv13md3xml", - "depends": ["generics", "matrixStats", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "generics", "matrixStats", "pracma"] }, "nnGarrote": { "name": "nnGarrote", @@ -88229,7 +89153,7 @@ "name": "nnTensor", "version": "1.3.0", "sha256": "1kkv3788qh3ls49d2ixvpyky96qz0qij8mbxaczqgrdmxpyfnc8k", - "depends": ["fields", "ggplot2", "MASS", "plot3D", "rTensor", "tagcloud"] + "depends": ["MASS", "fields", "ggplot2", "plot3D", "rTensor", "tagcloud"] }, "nna": { "name": "nna", @@ -88259,7 +89183,7 @@ "name": "nnfor", "version": "0.9.9", "sha256": "0jrp840vr5jyk76808l0d1r46hhvz0l0vimwdc82wilfh8sb5sz5", - "depends": ["forecast", "generics", "glmnet", "MASS", "neuralnet", "plotrix", "tsutils", "uroot"] + "depends": ["MASS", "forecast", "generics", "glmnet", "neuralnet", "plotrix", "tsutils", "uroot"] }, "nngeo": { "name": "nngeo", @@ -88277,7 +89201,7 @@ "name": "nnlib2Rcpp", "version": "0.2.8", "sha256": "06fb4wh39gdlywpyj86hnys87mrwrx2m6dw16zkrs1kawg4z5gvm", - "depends": ["class", "Rcpp"] + "depends": ["Rcpp", "class"] }, "nnls": { "name": "nnls", @@ -88289,13 +89213,19 @@ "name": "nnspat", "version": "0.1.2", "sha256": "1svqdb20x5d4wsbi97lhjwkhl623ksawf4w4w1f0hwsx0f3xjzvi", - "depends": ["MASS", "pcds", "Rdpack"] + "depends": ["MASS", "Rdpack", "pcds"] }, "nnt": { "name": "nnt", "version": "0.1.4", "sha256": "1rrqq8m3plsq13hsh53h948wbx37gl87hplj4ms2pxxf1zwqsmnj", - "depends": ["survival", "survRM2"] + "depends": ["survRM2", "survival"] + }, + "nntmvn": { + "name": "nntmvn", + "version": "1.0.0", + "sha256": "0anv6vl9md127y59k6sqvpx7sacfwz62amgc4x0yb0rj7xwvzjnd", + "depends": ["GpGp", "TruncatedNormal"] }, "noaaoceans": { "name": "noaaoceans", @@ -88307,25 +89237,25 @@ "name": "noaastormevents", "version": "0.2.0", "sha256": "1d93h8av0bbv7a56g6m000qpsnzqpfdla0fmcj5y8fbbqkipxnfr", - "depends": ["choroplethr", "choroplethrMaps", "data_table", "dplyr", "forcats", "ggplot2", "hurricaneexposure", "lubridate", "magrittr", "maps", "plyr", "RColorBrewer", "RCurl", "rlang", "stringr", "tibble", "tidyr", "viridis", "XML"] + "depends": ["RColorBrewer", "RCurl", "XML", "choroplethr", "choroplethrMaps", "data_table", "dplyr", "forcats", "ggplot2", "hurricaneexposure", "lubridate", "magrittr", "maps", "plyr", "rlang", "stringr", "tibble", "tidyr", "viridis"] }, "noah": { "name": "noah", "version": "0.1.0", "sha256": "1ln23lp4c70fin9sjjhm4ngy47f8sk2mcljp5q449b7hq8gqi12c", - "depends": ["assertthat", "crayon", "digest", "dplyr", "hash", "magrittr", "purrr", "R6", "rlang", "stringr"] + "depends": ["R6", "assertthat", "crayon", "digest", "dplyr", "hash", "magrittr", "purrr", "rlang", "stringr"] }, "noctua": { "name": "noctua", "version": "2.6.2", "sha256": "1j7ikcviapdddyi71zwybcjyj6f1kyszb44vmbcq7jmvm7iazvmx", - "depends": ["data_table", "DBI", "paws", "uuid"] + "depends": ["DBI", "data_table", "paws", "uuid"] }, "nodbi": { "name": "nodbi", - "version": "0.10.4", - "sha256": "0q4nsxic1jlraipdc6zi711c3316n9wgq1cgbywhjlxb52qhkmd7", - "depends": ["DBI", "jqr", "jsonlite", "R_utils", "stringi", "uuid", "V8"] + "version": "0.10.6", + "sha256": "1kgn6c0s0gac38ip5z5sm56psg912b9hg3klsymazam9r76ddaqx", + "depends": ["DBI", "R_utils", "V8", "jqr", "jsonlite", "stringi", "uuid"] }, "node2vec": { "name": "node2vec", @@ -88337,7 +89267,7 @@ "name": "nodeSub", "version": "1.2.8", "sha256": "1ks9bx2kswbhcw2sbnx3zx2pbx0n30b5f6awr5haviw29zv24izw", - "depends": ["ape", "beastier", "beautier", "DDD", "geiger", "lifecycle", "pbapply", "phangorn", "phylobase", "rappdirs", "Rcpp", "Rmpfr", "stringr", "testit", "tibble", "tracerer"] + "depends": ["DDD", "Rcpp", "Rmpfr", "ape", "beastier", "beautier", "geiger", "lifecycle", "pbapply", "phangorn", "phylobase", "rappdirs", "stringr", "testit", "tibble", "tracerer"] }, "nodiv": { "name": "nodiv", @@ -88367,7 +89297,7 @@ "name": "noisemodel", "version": "1.0.2", "sha256": "1p5rripvpcgxikgy84jaxbx0spyrclidv17i2pkf3i6712ap3m81", - "depends": ["C50", "caret", "classInt", "e1071", "ExtDist", "FNN", "ggplot2", "lsr", "nnet", "RColorBrewer", "RSNNS", "stringr"] + "depends": ["C50", "ExtDist", "FNN", "RColorBrewer", "RSNNS", "caret", "classInt", "e1071", "ggplot2", "lsr", "nnet", "stringr"] }, "noisyCE2": { "name": "noisyCE2", @@ -88379,25 +89309,25 @@ "name": "noisySBM", "version": "0.1.4", "sha256": "1zdkxr48kvpqs49figxxznq3d45nalja92lyal71m066s1blc6dg", - "depends": ["ggplot2", "gtools", "RColorBrewer"] + "depends": ["RColorBrewer", "ggplot2", "gtools"] }, "noisyr": { "name": "noisyr", "version": "1.0.0", "sha256": "05nvxz5qa4lsi62va74yq4m68nlacjkl8xj5nsq7dik3357y53dr", - "depends": ["doParallel", "dplyr", "foreach", "GenomicRanges", "ggplot2", "IRanges", "magrittr", "philentropy", "preprocessCore", "Rsamtools", "tibble"] + "depends": ["GenomicRanges", "IRanges", "Rsamtools", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "philentropy", "preprocessCore", "tibble"] }, "noisysbmGGM": { "name": "noisysbmGGM", "version": "0.1.2.3", "sha256": "0mq0rczxkrmfax8i08f60ymia3i6f7q1y96bwk6igf3sismdnx3j", - "depends": ["huge", "igraph", "MASS", "ppcor", "RColorBrewer", "Rcpp", "RcppArmadillo", "SILGGM"] + "depends": ["MASS", "RColorBrewer", "Rcpp", "RcppArmadillo", "SILGGM", "huge", "igraph", "ppcor"] }, "nolock": { "name": "nolock", "version": "1.1.0", "sha256": "1d909qq6091rbsmnls2lc8l64iy7cam281s4854v4iar8l4dxh77", - "depends": ["crayon", "NCmisc", "rstudioapi", "stringr"] + "depends": ["NCmisc", "crayon", "rstudioapi", "stringr"] }, "nombre": { "name": "nombre", @@ -88409,12 +89339,12 @@ "name": "nomclust", "version": "2.8.0", "sha256": "1bl92zaf4iidm48xjxj0v812lx7gk3i3frvb59xr71y91ranwjpv", - "depends": ["cluster", "clValid", "Rcpp"] + "depends": ["Rcpp", "clValid", "cluster"] }, "nominatimlite": { "name": "nominatimlite", - "version": "0.4.0", - "sha256": "1qvbg4dpy65xjmh7i96xhm7cw07w375hm119540gqmc9z1zdh4g3", + "version": "0.4.1", + "sha256": "0vnpd21ybwmkkafsd65zg9bdcnmffxwqxrdfhgwdv82sclnd8xa8", "depends": ["dplyr", "jsonlite", "sf"] }, "nomisr": { @@ -88439,7 +89369,7 @@ "name": "nomogramFormula", "version": "1.2.0.0", "sha256": "1j6g5kndl0n2g8acwq8pn09sk0bjcsphbcd77ha1j5dnwdmy73c0", - "depends": ["do", "Hmisc", "rms"] + "depends": ["Hmisc", "do", "rms"] }, "nonLinearDotPlot": { "name": "nonLinearDotPlot", @@ -88451,7 +89381,7 @@ "name": "noncompliance", "version": "0.2.2", "sha256": "1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6", - "depends": ["data_table", "Rcpp"] + "depends": ["Rcpp", "data_table"] }, "noncomplyR": { "name": "noncomplyR", @@ -88469,25 +89399,25 @@ "name": "nonlinearICP", "version": "0.1.2.1", "sha256": "1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np", - "depends": ["caTools", "CondIndTests", "data_tree", "randomForest"] + "depends": ["CondIndTests", "caTools", "data_tree", "randomForest"] }, "nonlinearTseries": { "name": "nonlinearTseries", "version": "0.3.0", "sha256": "1qzg5azydivxp04bs1s3m21bigacyrv6cak3cx7xpgq2w4fnb3br", - "depends": ["lifecycle", "Matrix", "Rcpp", "RcppArmadillo", "tseries", "zoo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "lifecycle", "tseries", "zoo"] }, "nonmem2R": { "name": "nonmem2R", "version": "0.2.5", "sha256": "0py0nn8sn9p4lcdbjsfmz3z0ch3i3qbvfjifmjzdhdjgd9vvi19r", - "depends": ["ggplot2", "gridExtra", "lattice", "latticeExtra", "MASS", "mvtnorm", "reshape2", "splines2"] + "depends": ["MASS", "ggplot2", "gridExtra", "lattice", "latticeExtra", "mvtnorm", "reshape2", "splines2"] }, "nonmem2rx": { "name": "nonmem2rx", "version": "0.1.4", "sha256": "08yyh7jwlqfxprwrs2f3pgjzlii66p98ixnd5r2jliqdzxbx1ciy", - "depends": ["checkmate", "cli", "crayon", "data_table", "digest", "dparser", "ggforce", "ggplot2", "lotri", "magrittr", "qs", "Rcpp", "rxode2", "rxode2parse", "xml2"] + "depends": ["Rcpp", "checkmate", "cli", "crayon", "data_table", "digest", "dparser", "ggforce", "ggplot2", "lotri", "magrittr", "qs", "rxode2", "rxode2parse", "xml2"] }, "nonmemica": { "name": "nonmemica", @@ -88517,7 +89447,7 @@ "name": "nonparaeff", "version": "0.5-13", "sha256": "04ya0b4nwfcyw7asby8j5npa59p8w8ri3cifpigvqmdg47v9kzmc", - "depends": ["geometry", "Hmisc", "lpSolve"] + "depends": ["Hmisc", "geometry", "lpSolve"] }, "nonparametric_bayes": { "name": "nonparametric.bayes", @@ -88529,7 +89459,13 @@ "name": "nonprobsvy", "version": "0.1.0", "sha256": "0p5x88dgas0hy3xydn5803pybf5ryxc85gzn9fb2c5kdrv2v0pcr", - "depends": ["doParallel", "foreach", "MASS", "mathjaxr", "Matrix", "maxLik", "ncvreg", "nleqslv", "RANN", "Rcpp", "RcppArmadillo", "survey"] + "depends": ["MASS", "Matrix", "RANN", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "mathjaxr", "maxLik", "ncvreg", "nleqslv", "survey"] + }, + "nonsmooth": { + "name": "nonsmooth", + "version": "1.0.0", + "sha256": "02hb9fwz3gc2kgvnvxrwsjacxj1p76qz7ss9504w9fm1pdxly837", + "depends": ["np", "reshape2"] }, "nopaco": { "name": "nopaco", @@ -88553,7 +89489,7 @@ "name": "norMmix", "version": "0.1-1", "sha256": "1nkgidzbqp83bqvkpalxs58s2blpx9s1j9dm2i13plfx3kv0d6x3", - "depends": ["cluster", "MASS", "mclust", "mvtnorm", "sfsmisc"] + "depends": ["MASS", "cluster", "mclust", "mvtnorm", "sfsmisc"] }, "nord": { "name": "nord", @@ -88601,7 +89537,7 @@ "name": "normalr", "version": "1.0.0", "sha256": "1ahrg188vbhnrnwag0zi6lcb3g0y1mbz06sl3j1wyllq5l918cc7", - "depends": ["magrittr", "MASS", "purrr", "rlang", "shiny"] + "depends": ["MASS", "magrittr", "purrr", "rlang", "shiny"] }, "normfluodbf": { "name": "normfluodbf", @@ -88625,7 +89561,7 @@ "name": "nortsTest", "version": "1.1.2", "sha256": "0z3ganmaz3p0s957g123gcmcf6x01gvsmrl6ddi3n588hysscqsy", - "depends": ["cowplot", "forecast", "ggplot2", "gridExtra", "MASS", "nortest", "tseries", "uroot", "zoo"] + "depends": ["MASS", "cowplot", "forecast", "ggplot2", "gridExtra", "nortest", "tseries", "uroot", "zoo"] }, "nos": { "name": "nos", @@ -88721,7 +89657,7 @@ "name": "nparMD", "version": "0.2.1", "sha256": "0wfmw1d4w8frbimq62749siy28bzci3h3lhsl5jx7zl7mxpl0q9a", - "depends": ["Formula", "gtools", "MASS", "matrixcalc", "matrixStats"] + "depends": ["Formula", "MASS", "gtools", "matrixStats", "matrixcalc"] }, "nparcomp": { "name": "nparcomp", @@ -88733,13 +89669,13 @@ "name": "nparsurv", "version": "0.1.0", "sha256": "1qy9qkkpqrk49vjxbyvl25i4kfk0py6v64izd8lmaw38dynybpy2", - "depends": ["survival", "TH_data"] + "depends": ["TH_data", "survival"] }, "npboottprm": { "name": "npboottprm", - "version": "0.2.1", - "sha256": "1g139xrry2j14jcs36hqa3y72y5vlnmn8vxkv7yh0jcgj0czl7d0", - "depends": ["DT", "fGarch", "ggplot2", "lmPerm", "MASS", "MKinfer", "shiny", "shinythemes", "sn"] + "version": "0.3.1", + "sha256": "0ipicpy1hfxbj7mw18slykxwyyav8r2z8rsnqhhvxw3f9w656nhd", + "depends": ["DT", "MASS", "MKinfer", "RPostgres", "fGarch", "ggplot2", "lmPerm", "pool", "shiny", "shinythemes", "sn"] }, "npboottprmFBar": { "name": "npboottprmFBar", @@ -88751,13 +89687,13 @@ "name": "npbr", "version": "1.8", "sha256": "1mvl16z4s517a87ljl1ksr1ixrz3c6v22hv36s6x60f9rcs96jj8", - "depends": ["Benchmarking", "np", "quadprog", "Rglpk"] + "depends": ["Benchmarking", "Rglpk", "np", "quadprog"] }, "npclust": { "name": "npclust", "version": "0.1.0", "sha256": "0a1las0vxm4mhwvds66lvq87kb140sjrnjq5sihbrrh7wpbq31zg", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "npcopTest": { "name": "npcopTest", @@ -88787,7 +89723,7 @@ "name": "npcurePK", "version": "1.0-2", "sha256": "1p1vl9w8z8xq6bfsn1kgq5cnzyf4aiax8iis0vb4xcxrb2wl0mav", - "depends": ["data_table", "DescTools", "doParallel", "foreach", "npcure"] + "depends": ["DescTools", "data_table", "doParallel", "foreach", "npcure"] }, "npde": { "name": "npde", @@ -88809,8 +89745,8 @@ }, "nphRCT": { "name": "nphRCT", - "version": "0.1.0", - "sha256": "0b29izx3rz17g0jx72s33jj8ps0z3kq8fj2v0035hcjacnswz9ya", + "version": "0.1.1", + "sha256": "0znc5z9yfan6m2yy96x661xnklgqdws0zar4jl1p5jjj8azwg9sb", "depends": ["ggplot2", "purrr", "survival"] }, "npi": { @@ -88901,13 +89837,13 @@ "name": "nprobust", "version": "0.4.0", "sha256": "1vry64r3xms6xls6bqq918prjyhs5svhl2yjvq0jxycaaqw2sgyp", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2"] }, "nproc": { "name": "nproc", "version": "2.1.5", "sha256": "1p5wjz0rafg27fsl48l9pmki3px1k0pav3ignz4swik5i1nhnc8w", - "depends": ["ada", "e1071", "glmnet", "MASS", "naivebayes", "randomForest", "ROCR", "tree"] + "depends": ["MASS", "ROCR", "ada", "e1071", "glmnet", "naivebayes", "randomForest", "tree"] }, "nprotreg": { "name": "nprotreg", @@ -88925,7 +89861,7 @@ "name": "npsm", "version": "2.0.0", "sha256": "0d2pa55jcxrphmsnv0wcv3xsdidjcr8b8s9krbal27rjrvqqh27s", - "depends": ["class", "plyr", "Rfit"] + "depends": ["Rfit", "class", "plyr"] }, "npsp": { "name": "npsp", @@ -88997,7 +89933,7 @@ "name": "nse", "version": "1.21", "sha256": "0mw2ijc6z0l8sa7z5fbcapp1rl87zhh5v32iw1mcjw4khwc93bk7", - "depends": ["coda", "mcmc", "mcmcse", "np", "Rcpp", "sandwich"] + "depends": ["Rcpp", "coda", "mcmc", "mcmcse", "np", "sandwich"] }, "nseq": { "name": "nseq", @@ -89007,15 +89943,9 @@ }, "nser": { "name": "nser", - "version": "1.5.2", - "sha256": "0p7yz561m85962l0cfld7aa932rkiypjg8lc46zf43wzk2idlgxi", - "depends": ["curl", "dplyr", "googleVis", "lubridate", "magrittr", "purrr", "readr", "reticulate", "rvest", "stringr", "xml2"] - }, - "nseval": { - "name": "nseval", - "version": "0.5.1", - "sha256": "10b9kvvnlgc0jpbjnpkjmrkbl8plbkbggckwzy41kv41ha7rgda2", - "depends": [] + "version": "1.5.3", + "sha256": "0v88gbcak22wpqanp5b4j1fdsp3s4jdhwq4a399msmjd1kxzf5f6", + "depends": ["curl", "dplyr", "googleVis", "httr", "lubridate", "magrittr", "purrr", "readr", "reticulate", "rvest", "stringr", "xml2"] }, "nsga2R": { "name": "nsga2R", @@ -89077,6 +90007,12 @@ "sha256": "0is9avgam63irzrah6s8yfkh9amwq9rsfhlpfx9s375ih8d3pzww", "depends": [] }, + "ntsDatasets": { + "name": "ntsDatasets", + "version": "0.2.0", + "sha256": "0nya8zhm4lf7d4n2c4wgq144s1lxjb3qc7572gl9ppmgcaa3a9ig", + "depends": [] + }, "ntsDists": { "name": "ntsDists", "version": "2.1.1", @@ -89087,19 +90023,19 @@ "name": "nucim", "version": "1.0.11", "sha256": "12qfs4xd8lnkjhb0gkvxym07rndrwh5idvppj16v78amrk96rj5z", - "depends": ["bioimagetools", "EBImage", "fields", "stringr"] + "depends": ["EBImage", "bioimagetools", "fields", "stringr"] }, "nuggets": { "name": "nuggets", "version": "1.0.2", "sha256": "1ijlzcp42bhb2qpnnv9gi3nm87pprgs54m8s6vl7lgqv2njdasdg", - "depends": ["cli", "Rcpp", "rlang", "testthat", "tibble", "tidyr", "tidyselect"] + "depends": ["Rcpp", "cli", "rlang", "testthat", "tibble", "tidyr", "tidyselect"] }, "nullabor": { "name": "nullabor", - "version": "0.3.9", - "sha256": "19nfmsnzndg9pdjg7m9w4vm4c3209ny52cpjdhmmhggvf7dxaiyg", - "depends": ["dplyr", "forecast", "fpc", "ggplot2", "magrittr", "MASS", "moments", "purrr", "rlang", "tibble", "tidyr", "tsibble", "viridis"] + "version": "0.3.12", + "sha256": "0ymdw07x6xh204nzcd05d40zmxgnk7ny73qwbvy1gz5qh9617v96", + "depends": ["MASS", "dplyr", "fpc", "ggplot2", "magrittr", "moments", "purrr", "tibble", "tidyr"] }, "numDeriv": { "name": "numDeriv", @@ -89129,7 +90065,7 @@ "name": "numbat", "version": "1.4.0", "sha256": "1a9rcna5m7lyh56d8dwwzq32svgad8vwidikna1j2j63i4frjms4", - "depends": ["ape", "caTools", "data_table", "dendextend", "dplyr", "GenomicRanges", "ggplot2", "ggraph", "ggtree", "glue", "hahmmr", "igraph", "IRanges", "logger", "magrittr", "Matrix", "optparse", "parallelDist", "patchwork", "pryr", "purrr", "R_utils", "Rcpp", "RcppArmadillo", "RhpcBLASctl", "roptim", "scales", "scistreer", "stringr", "tibble", "tidygraph", "tidyr", "vcfR", "zoo"] + "depends": ["GenomicRanges", "IRanges", "Matrix", "R_utils", "Rcpp", "RcppArmadillo", "RhpcBLASctl", "ape", "caTools", "data_table", "dendextend", "dplyr", "ggplot2", "ggraph", "ggtree", "glue", "hahmmr", "igraph", "logger", "magrittr", "optparse", "parallelDist", "patchwork", "pryr", "purrr", "roptim", "scales", "scistreer", "stringr", "tibble", "tidygraph", "tidyr", "vcfR", "zoo"] }, "numberize": { "name": "numberize", @@ -89141,7 +90077,7 @@ "name": "numberofalleles", "version": "1.0.1", "sha256": "0rjl21844yqp2503gy71c6vg8xywc4lcx7qr9vwvkjw5wiwxls11", - "depends": ["partitions", "pedtools", "Rcpp", "ribd"] + "depends": ["Rcpp", "partitions", "pedtools", "ribd"] }, "numbers": { "name": "numbers", @@ -89165,7 +90101,7 @@ "name": "nutriNetwork", "version": "0.1.2", "sha256": "0wmprgibx9jzaav93m3kqx1h8cflvx287yjfi3b8pvmgna7q8fsy", - "depends": ["glasso", "huge", "igraph", "Matrix", "tmvtnorm"] + "depends": ["Matrix", "glasso", "huge", "igraph", "tmvtnorm"] }, "nutrition": { "name": "nutrition", @@ -89175,8 +90111,8 @@ }, "nuts": { "name": "nuts", - "version": "1.0.0", - "sha256": "0g2gxpaqg56c0s34prcmy3das4yspjc71zawnqhp4am6v4bgbq5v", + "version": "1.1.0", + "sha256": "028n53zancc8ca0l0lis9zbj5hbqk780adjvx5ifz90c5my4brjv", "depends": ["cli", "dplyr", "glue", "lifecycle", "rlang"] }, "nvctr": { @@ -89189,7 +90125,7 @@ "name": "nvmix", "version": "0.1-1", "sha256": "055f99v3l9zzd2r23l7101y0sy5p45zrsh3yblmbmyq8b11bx4rj", - "depends": ["ADGofTest", "copula", "Matrix", "mnormt", "pcaPP", "pracma", "qrng"] + "depends": ["ADGofTest", "Matrix", "copula", "mnormt", "pcaPP", "pracma", "qrng"] }, "nycflights13": { "name": "nycflights13", @@ -89229,15 +90165,15 @@ }, "o2geosocial": { "name": "o2geosocial", - "version": "1.1.2", - "sha256": "0myzr25jjjvlszr0j5ay2nha1nrccwhgh0qd01p52xrlggfjhz1g", - "depends": ["data_table", "geosphere", "ggplot2", "outbreaker2", "Rcpp", "visNetwork"] + "version": "1.1.3", + "sha256": "044m21116zwbkh55z84pns5l3agvdw50pcza669blmf3za7m2bby", + "depends": ["Rcpp", "data_table", "geosphere", "ggplot2", "outbreaker2", "visNetwork"] }, "o2plsda": { "name": "o2plsda", - "version": "0.0.18", - "sha256": "17dmb82q4g7lspvrvrz9324qinkr07vlhxsr2vd5ikj7cqxivgmv", - "depends": ["dplyr", "ggplot2", "ggrepel", "magrittr", "Rcpp", "RcppArmadillo"] + "version": "0.0.25", + "sha256": "1lsww2g9inpaw7mhg49ia517am14sjvy9i92h2xsfv4qygqkl1wq", + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "ggrepel", "magrittr"] }, "oHMMed": { "name": "oHMMed", @@ -89303,7 +90239,7 @@ "name": "obfuscatoR", "version": "0.2.2", "sha256": "1scd63giywfbvpynbxbk0kq01rwhx62416dibs5gky15dxfcsvmk", - "depends": ["crayon", "matrixStats", "readr", "Rfast", "stringr", "tibble"] + "depends": ["Rfast", "crayon", "matrixStats", "readr", "stringr", "tibble"] }, "objectProperties": { "name": "objectProperties", @@ -89333,7 +90269,7 @@ "name": "obliqueRSF", "version": "0.1.2", "sha256": "1y9bkhwlb9aabfvnz62cg128c242hd1qdrwmmf6i76yfg0b0w10k", - "depends": ["data_table", "dplyr", "ggplot2", "ggthemes", "glmnet", "missForest", "pec", "prodlim", "purrr", "Rcpp", "RcppArmadillo", "rlang", "scales", "survival", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "dplyr", "ggplot2", "ggthemes", "glmnet", "missForest", "pec", "prodlim", "purrr", "rlang", "scales", "survival", "tidyr"] }, "obsSens": { "name": "obsSens", @@ -89361,9 +90297,9 @@ }, "occCite": { "name": "occCite", - "version": "0.5.6", - "sha256": "08bc0pi2i2fmc9fcmir150b7g8jnd58q3qaakw2gk25yjy14rp7j", - "depends": ["bib2df", "BIEN", "curl", "DBI", "dplyr", "ggplot2", "htmltools", "httr", "leaflet", "lubridate", "RColorBrewer", "rgbif", "rlang", "RPostgreSQL", "stringr", "taxize", "tidyr", "viridis", "waffle"] + "version": "0.5.7", + "sha256": "130fk8m1dcid4kiswr4fpq6da84b2gfjwa20gmcsp1r75yzi95nx", + "depends": ["BIEN", "DBI", "RColorBrewer", "RPostgreSQL", "bib2df", "curl", "dplyr", "ggplot2", "htmltools", "leaflet", "lubridate", "rgbif", "rlang", "stringr", "taxize", "tidyr", "viridis", "waffle"] }, "occumb": { "name": "occumb", @@ -89391,9 +90327,9 @@ }, "oce": { "name": "oce", - "version": "1.8-2", - "sha256": "1a9zld3q009v9bvqpkn4fy0qfrsjmcz9j1f0jva75ygi8hdywpyg", - "depends": ["gsw", "Rcpp"] + "version": "1.8-3", + "sha256": "13vg1g3pn1bmmjb5sb34qmwy2czxigin02nz4vkwlw9z4vpjkwgi", + "depends": ["Rcpp", "gsw"] }, "oceCens": { "name": "oceCens", @@ -89405,7 +90341,7 @@ "name": "oceanexplorer", "version": "0.1.0", "sha256": "07l2la7nrqj8bsyv0flyjs08wishlvq6v2hx5n1g9kag4bcfl6vz", - "depends": ["bslib", "dplyr", "DT", "fs", "ggplot2", "glue", "maps", "miniUI", "ncmeta", "purrr", "rlang", "RNetCDF", "rstudioapi", "sf", "shiny", "shinyFeedback", "shinyjs", "stars", "thematic", "waiter"] + "depends": ["DT", "RNetCDF", "bslib", "dplyr", "fs", "ggplot2", "glue", "maps", "miniUI", "ncmeta", "purrr", "rlang", "rstudioapi", "sf", "shiny", "shinyFeedback", "shinyjs", "stars", "thematic", "waiter"] }, "oceanic": { "name": "oceanic", @@ -89417,7 +90353,7 @@ "name": "oceanis", "version": "1.8.5", "sha256": "13zdzqjlf5pihji6np9a3m2j5ycy4jvfl75knzry2ir78zr9ngj7", - "depends": ["classInt", "dplyr", "DT", "ggplot2", "htmlwidgets", "leaflet", "leaflet_extras", "lwgeom", "sf", "shiny", "shinyBS", "shinyjs", "shinythemes", "stringr", "webshot", "zip"] + "depends": ["DT", "classInt", "dplyr", "ggplot2", "htmlwidgets", "leaflet", "leaflet_extras", "lwgeom", "sf", "shiny", "shinyBS", "shinyjs", "shinythemes", "stringr", "webshot", "zip"] }, "oceanmap": { "name": "oceanmap", @@ -89441,7 +90377,7 @@ "name": "ocf", "version": "1.0.0", "sha256": "04d0j863a2zqj3v9s9iwlc4v7fxpp6cydpphxcfr6n22f8ciq5bd", - "depends": ["glmnet", "Matrix", "orf", "ranger", "Rcpp", "RcppEigen", "stringr"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "glmnet", "orf", "ranger", "stringr"] }, "ockc": { "name": "ockc", @@ -89453,7 +90389,7 @@ "name": "oclust", "version": "0.2.0", "sha256": "08247vcjs7hhzbj69f2x39n5y5ycns0qd7pdlvpwyn4j7yd1ji31", - "depends": ["dbscan", "entropy", "MASS", "mclust", "mixture", "mvtnorm"] + "depends": ["MASS", "dbscan", "entropy", "mclust", "mixture", "mvtnorm"] }, "ocp": { "name": "ocp", @@ -89465,13 +90401,19 @@ "name": "ocs4R", "version": "0.2-3", "sha256": "09zl9jl1kzvyq0wccp41j32pr3as93qh250iaawhwkpcswjpyl89", - "depends": ["curl", "httr", "jsonlite", "keyring", "openssl", "R6", "XML"] + "depends": ["R6", "XML", "curl", "httr", "jsonlite", "keyring", "openssl"] + }, + "octopucs": { + "name": "octopucs", + "version": "0.1.1", + "sha256": "0l9km2q9yjv43bis32gmw6sc7y5c425plgs0vi9sjx17pgsyvqdw", + "depends": ["progress", "stringr", "vegan"] }, "octopus": { "name": "octopus", "version": "0.4.2", "sha256": "0a24czpsvq5xpr3g9m6d2bsd3dv5jcr2m724gz4z3c56f4xbxd8b", - "depends": ["bslib", "data_table", "DBI", "dplyr", "DT", "glue", "httr", "janitor", "rio", "shiny", "shinyAce", "shinyjs"] + "depends": ["DBI", "DT", "bslib", "data_table", "dplyr", "glue", "httr", "janitor", "rio", "shiny", "shinyAce", "shinyjs"] }, "octopusR": { "name": "octopusR", @@ -89489,13 +90431,13 @@ "name": "odbc", "version": "1.5.0", "sha256": "1c49209bf1swsk5mhwb4zxymlg5dha9rg500nq83kbgib6ikkk9f", - "depends": ["bit64", "blob", "cli", "DBI", "hms", "lifecycle", "Rcpp", "rlang"] + "depends": ["DBI", "Rcpp", "bit64", "blob", "cli", "hms", "lifecycle", "rlang"] }, "odbr": { "name": "odbr", "version": "0.1.0", "sha256": "03bdhmya86whrzijc8h6gvd4yzmivdskm42a80n4ryqn4szfyrpd", - "depends": ["data_table", "fs", "haven", "piggyback", "R_utils", "sf", "usethis"] + "depends": ["R_utils", "data_table", "fs", "haven", "piggyback", "sf", "usethis"] }, "oddnet": { "name": "oddnet", @@ -89531,7 +90473,7 @@ "name": "oddstream", "version": "0.5.0", "sha256": "1nwjw7fq6b4jdq4m2w0a7xgmzjg5a6pbma1d3r9msiz8rnhb0c54", - "depends": ["dplyr", "ggplot2", "kernlab", "ks", "magrittr", "MASS", "mgcv", "moments", "mvtsplot", "pcaPP", "RColorBrewer", "RcppRoll", "reshape", "tibble", "tidyr"] + "depends": ["MASS", "RColorBrewer", "RcppRoll", "dplyr", "ggplot2", "kernlab", "ks", "magrittr", "mgcv", "moments", "mvtsplot", "pcaPP", "reshape", "tibble", "tidyr"] }, "odeGUTS": { "name": "odeGUTS", @@ -89549,7 +90491,7 @@ "name": "odin", "version": "1.2.5", "sha256": "1fczgf3x35inlyhkw1h4mf8j9alrv4w98b9jfmbc2a9q29gi161p", - "depends": ["cinterpolate", "deSolve", "digest", "glue", "jsonlite", "R6", "ring", "withr"] + "depends": ["R6", "cinterpolate", "deSolve", "digest", "glue", "jsonlite", "ring", "withr"] }, "odk": { "name": "odk", @@ -89565,21 +90507,21 @@ }, "oeli": { "name": "oeli", - "version": "0.5.0", - "sha256": "0v6pk49arigm9v979in9h06pqhz3gz56a1d7vcbd1pxqa8y4ypaz", - "depends": ["benchmarkme", "checkmate", "cli", "ggplot2", "hexSticker", "latex2exp", "Rcpp", "RcppArmadillo", "rprojroot", "showtext", "sysfonts", "testthat", "usethis"] + "version": "0.5.2", + "sha256": "0a9bk8dch6852nkddxwjyrs24knpx09sb5dyfakb9fpmksrv4f3p", + "depends": ["Rcpp", "RcppArmadillo", "benchmarkme", "checkmate", "cli", "ggplot2", "hexSticker", "latex2exp", "rprojroot", "showtext", "sysfonts", "testthat", "usethis"] }, "oem": { "name": "oem", - "version": "2.0.11", - "sha256": "0p9s68zgma9mcjnz0xg6h07yp38rqj209asg18hji8528iazbv8g", - "depends": ["BH", "bigmemory", "foreach", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen"] + "version": "2.0.12", + "sha256": "1a12d4fnrkrawb5f7rfidjixjl1v5qznqdyv8a5s1bp37pf1gh89", + "depends": ["BH", "Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "RcppEigen", "bigmemory", "foreach"] }, "oenb": { "name": "oenb", "version": "0.0.2", "sha256": "1jgxw7ycx2lcdzglg9nix8k08fs4r6i5jdsjzrd6w1dg6smsinl5", - "depends": ["dplyr", "XML"] + "depends": ["XML", "dplyr"] }, "oesr": { "name": "oesr", @@ -89603,19 +90545,19 @@ "name": "ofGEM", "version": "1.0", "sha256": "0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k", - "depends": ["CompQuadForm", "forestplot", "MASS"] + "depends": ["CompQuadForm", "MASS", "forestplot"] }, "officedown": { "name": "officedown", - "version": "0.3.1", - "sha256": "0ymidhrnbk8z7ni4y0ngizyc7d3f35nmhmhpfqw8jg9faizich8z", + "version": "0.3.3", + "sha256": "0mxg46jg4vb6bxxqayvf84g8bllwsf11ybkfinrsdzdlkw89s3vk", "depends": ["knitr", "memoise", "officer", "rlang", "rmarkdown", "rvg", "uuid", "xml2", "yaml"] }, "officer": { "name": "officer", "version": "0.6.6", "sha256": "04mlmq64gjdicdlai78iy28n8z64p3k4mnk4k381znlrj9x3zz7i", - "depends": ["openssl", "R6", "ragg", "uuid", "xml2", "zip"] + "depends": ["R6", "openssl", "ragg", "uuid", "xml2", "zip"] }, "offlineChange": { "name": "offlineChange", @@ -89645,13 +90587,13 @@ "name": "ogrdbstats", "version": "0.5.0", "sha256": "140i4wippqr1260a1c4syg6lfspkf9q8rifnalf6iaaqx2bz4yfq", - "depends": ["alakazam", "argparser", "Biostrings", "bookdown", "ComplexHeatmap", "data_table", "dplyr", "ggplot2", "gridExtra", "magrittr", "RColorBrewer", "scales", "stringdist", "stringr", "tidyr", "tigger"] + "depends": ["Biostrings", "ComplexHeatmap", "RColorBrewer", "alakazam", "argparser", "bookdown", "data_table", "dplyr", "ggplot2", "gridExtra", "magrittr", "scales", "stringdist", "stringr", "tidyr", "tigger"] }, "ohenery": { "name": "ohenery", "version": "0.1.1", "sha256": "0i7cc110c30y7dm86srh2xkikkmlr28mvy0kkjxywxmiwnrsmzjq", - "depends": ["dplyr", "magrittr", "maxLik", "Rcpp"] + "depends": ["Rcpp", "dplyr", "magrittr", "maxLik"] }, "ohoegdm": { "name": "ohoegdm", @@ -89671,12 +90613,6 @@ "sha256": "0hkjs322vii1dsminlkwpwi12sc9pd88jag7p4dmy6nfw2hh2d69", "depends": ["lattice"] }, - "ohun": { - "name": "ohun", - "version": "1.0.1", - "sha256": "103s9sv70p9hw6q55j98wri5bxqazfn9hxpk1mm39x7navx3qzvp", - "depends": ["checkmate", "cli", "fftw", "ggplot2", "igraph", "rlang", "seewave", "sf", "tuneR", "warbleR"] - }, "oii": { "name": "oii", "version": "1.0.2.1", @@ -89693,7 +90629,7 @@ "name": "okxAPI", "version": "0.1.1", "sha256": "0wysfpkij9l265clw6qi4zpr1c860idxfp82xz2nmy1l5b2n8ri0", - "depends": ["base64enc", "data_table", "digest", "httr", "jsonlite", "R6", "websocket"] + "depends": ["R6", "base64enc", "data_table", "digest", "httr", "jsonlite", "websocket"] }, "olctools": { "name": "olctools", @@ -89703,9 +90639,9 @@ }, "ollamar": { "name": "ollamar", - "version": "1.1.1", - "sha256": "0zw71221fyjczkfj47hbs2ddl7p8h8igzp9zijfb5c6m4qg03gbl", - "depends": ["glue", "httr2", "jsonlite", "tibble"] + "version": "1.2.0", + "sha256": "1cs12w5rcm2v7bnzbmqpycm5r2n8c7iw6g6jzzw272hbsjjqkm8a", + "depends": ["base64enc", "crayon", "glue", "httr2", "jsonlite", "tibble"] }, "ollg": { "name": "ollg", @@ -89741,13 +90677,13 @@ "name": "omicsTools", "version": "1.0.5", "sha256": "0k6cpdxafz6x5360m97x8mvvi09mb36yx42slkq6nr4axpm089pf", - "depends": ["bs4Dash", "config", "dplyr", "DT", "golem", "magrittr", "readr", "shiny", "tibble"] + "depends": ["DT", "bs4Dash", "config", "dplyr", "golem", "magrittr", "readr", "shiny", "tibble"] }, "omicwas": { "name": "omicwas", "version": "0.8.0", "sha256": "03l53vbsard0hpaffcaa9l1aa3nh3w16j00k2jz2jqrrg02z0d7h", - "depends": ["broom", "data_table", "dplyr", "ff", "glmnet", "magrittr", "MASS", "matrixStats", "purrr", "rlang", "tidyr"] + "depends": ["MASS", "broom", "data_table", "dplyr", "ff", "glmnet", "magrittr", "matrixStats", "purrr", "rlang", "tidyr"] }, "omnibus": { "name": "omnibus", @@ -89763,21 +90699,21 @@ }, "omopgenerics": { "name": "omopgenerics", - "version": "0.2.1", - "sha256": "15vqym797spa9fcxq25is2fjc5q6id4h731vh720wjg857aja4h0", - "depends": ["cli", "dbplyr", "dplyr", "glue", "rlang", "snakecase", "stringr", "tidyr"] + "version": "0.3.0", + "sha256": "07w2k4hp33ll0adlcnpi7pbv3zqq806dish1vghigcx4wzvpsfgi", + "depends": ["cli", "dbplyr", "dplyr", "glue", "lifecycle", "purrr", "rlang", "snakecase", "stringr", "tidyr", "vctrs"] }, "ompr": { "name": "ompr", "version": "1.0.4", "sha256": "02glc09yrdvwls0i8ik1wh6fp3qa9ry55xd3yy3xk0rav8r3hcj3", - "depends": ["data_table", "fastmap", "lazyeval", "listcomp", "Matrix", "rlang"] + "depends": ["Matrix", "data_table", "fastmap", "lazyeval", "listcomp", "rlang"] }, "ompr_roi": { "name": "ompr.roi", "version": "1.0.2", "sha256": "1w0cyw5ixkri8523vdcfrlaf49farhgdf1bxiizwk5gppb3w5ibl", - "depends": ["Matrix", "ompr", "ROI", "slam"] + "depends": ["Matrix", "ROI", "ompr", "slam"] }, "omsvg": { "name": "omsvg", @@ -89789,7 +90725,7 @@ "name": "omu", "version": "1.1.2", "sha256": "19kfk5pcwdkdb41irw9dz34gibhnc8r1amm0mnvk4kbk7y3c1809", - "depends": ["broom", "caret", "dplyr", "FSA", "ggfortify", "ggplot2", "httr", "magrittr", "plyr", "randomForest", "rstatix", "stringr", "tidyr"] + "depends": ["FSA", "broom", "caret", "dplyr", "ggfortify", "ggplot2", "httr", "magrittr", "plyr", "randomForest", "rstatix", "stringr", "tidyr"] }, "onadata": { "name": "onadata", @@ -89825,25 +90761,25 @@ "name": "oncoPredict", "version": "1.2", "sha256": "0cp0b0d5nbanflp1jrkvdcybjii4lzv275d880wbadsx960rax2l", - "depends": ["BiocGenerics", "car", "GenomicFeatures", "GenomicRanges", "glmnet", "IRanges", "org_Hs_eg_db", "pls", "preprocessCore", "ridge", "S4Vectors", "sva", "TCGAbiolinks", "tidyverse", "TxDb_Hsapiens_UCSC_hg19_knownGene"] + "depends": ["BiocGenerics", "GenomicFeatures", "GenomicRanges", "IRanges", "S4Vectors", "TCGAbiolinks", "TxDb_Hsapiens_UCSC_hg19_knownGene", "car", "glmnet", "org_Hs_eg_db", "pls", "preprocessCore", "ridge", "sva", "tidyverse"] }, "oncomsm": { "name": "oncomsm", "version": "0.1.4", "sha256": "1crjpfa7yxcafnhsxs2sbf153lsr9ffaqdxjxp0zkd7hiash0mfm", - "depends": ["BH", "checkmate", "dplyr", "furrr", "ggplot2", "magrittr", "purrr", "Rcpp", "RcppEigen", "RcppNumerical", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "stringr", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppNumerical", "RcppParallel", "StanHeaders", "checkmate", "dplyr", "furrr", "ggplot2", "magrittr", "purrr", "rlang", "rstan", "rstantools", "stringr", "tibble", "tidyr"] }, "oncrawlR": { "name": "oncrawlR", "version": "0.2.0", "sha256": "0cm26diaf3jlzfrpgh13q0hakakmj6vy41wk9z0w81az4jcg9sn9", - "depends": ["caret", "DALEX", "dplyr", "e1071", "formattable", "fs", "ggplot2", "htmltools", "jsonlite", "pdp", "pROC", "RCurl", "readr", "rjson", "rlang", "rlist", "scales", "sparkline", "tidyr", "webshot", "xgboost"] + "depends": ["DALEX", "RCurl", "caret", "dplyr", "e1071", "formattable", "fs", "ggplot2", "htmltools", "jsonlite", "pROC", "pdp", "readr", "rjson", "rlang", "rlist", "scales", "sparkline", "tidyr", "webshot", "xgboost"] }, "ondisc": { "name": "ondisc", "version": "1.0.0", "sha256": "071jrldclkaz5lfp3k5fh1ilpgvvcnakh2vvnr69n3pri9dl3fls", - "depends": ["crayon", "data_table", "dplyr", "magrittr", "Matrix", "Rcpp", "readr", "rhdf5", "Rhdf5lib"] + "depends": ["Matrix", "Rcpp", "Rhdf5lib", "crayon", "data_table", "dplyr", "magrittr", "readr", "rhdf5"] }, "oneclust": { "name": "oneclust", @@ -89861,13 +90797,13 @@ "name": "onelogin", "version": "0.2.0", "sha256": "06p3a8kaxmvsj8nn7dy8w6wv1jjw67is991hqg9q0fa20ifym3dl", - "depends": ["glue", "jsonlite", "magrittr", "R6", "safer", "tibble"] + "depends": ["R6", "glue", "jsonlite", "magrittr", "safer", "tibble"] }, "onemap": { "name": "onemap", "version": "3.0.0", "sha256": "0h5bi4zyiglic60msrkfny28k1rb7avqbs87ipzwwayb452b970c", - "depends": ["dendextend", "dplyr", "ggplot2", "ggpubr", "htmlwidgets", "plotly", "princurve", "RColorBrewer", "Rcpp", "rebus", "reshape2", "smacof", "tidyr", "vcfR"] + "depends": ["RColorBrewer", "Rcpp", "dendextend", "dplyr", "ggplot2", "ggpubr", "htmlwidgets", "plotly", "princurve", "rebus", "reshape2", "smacof", "tidyr", "vcfR"] }, "onetime": { "name": "onetime", @@ -89885,7 +90821,7 @@ "name": "onion", "version": "1.5-3", "sha256": "0ja3nqi684c314hh9y5lp59bdfi01vycz17ridw1xlzh89na8c60", - "depends": ["emulator", "freealg", "mathjaxr", "Matrix"] + "depends": ["Matrix", "emulator", "freealg", "mathjaxr"] }, "onlineBcp": { "name": "onlineBcp", @@ -89903,13 +90839,13 @@ "name": "onlinePCA", "version": "1.3.2", "sha256": "1xc9kjqvpspymywzaykw4nw14y43fi4ydwj4jfhvx5ws51f7y9i8", - "depends": ["Rcpp", "RcppArmadillo", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo"] }, "onlineforecast": { "name": "onlineforecast", "version": "1.0.2", "sha256": "0qj9943hmcf584b7czf877zg5rxz8byg97dkk3gnb57q5ar60f3z", - "depends": ["digest", "pbs", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "digest", "pbs"] }, "onlineretail": { "name": "onlineretail", @@ -89981,25 +90917,25 @@ "name": "ontologyPlot", "version": "1.7", "sha256": "06ynryr4yx2mg85v12vhggx795hwwwfniskv3dgmb5nmrxhvh26m", - "depends": ["ontologyIndex", "paintmap", "Rgraphviz"] + "depends": ["Rgraphviz", "ontologyIndex", "paintmap"] }, "ontologySimilarity": { "name": "ontologySimilarity", "version": "2.7", "sha256": "03fga6xqvxpa3hwf5pb0dzyz4scz2szvbgm8bsj1wl35gl477cjp", - "depends": ["ontologyIndex", "Rcpp"] + "depends": ["Rcpp", "ontologyIndex"] }, "ontophylo": { "name": "ontophylo", "version": "1.1.3", "sha256": "1pb8w39ckx2ffchrrxp1jqs555b5bfz7cv5kbwgyzpfshv9s0ca4", - "depends": ["ape", "dplyr", "fANCOVA", "ggplot2", "grImport", "magrittr", "ontologyIndex", "phytools", "purrr", "RColorBrewer", "stringdist", "tibble", "tidyr", "truncnorm"] + "depends": ["RColorBrewer", "ape", "dplyr", "fANCOVA", "ggplot2", "grImport", "magrittr", "ontologyIndex", "phytools", "purrr", "stringdist", "tibble", "tidyr", "truncnorm"] }, "oolong": { "name": "oolong", "version": "0.6.1", "sha256": "10fn3llypnglz6i02pii7i4lki0hrh46b76y8wd7df8j4bcixnn5", - "depends": ["cli", "cowplot", "digest", "ggplot2", "irr", "purrr", "quanteda", "R6", "seededlda", "shiny", "tibble"] + "depends": ["R6", "cli", "cowplot", "digest", "ggplot2", "irr", "purrr", "quanteda", "seededlda", "shiny", "tibble"] }, "oompaBase": { "name": "oompaBase", @@ -90023,7 +90959,7 @@ "name": "oosse", "version": "1.0.11", "sha256": "08nx25j5m6vqg9hqns6psldfdmsb81ixjlzdhxpx392ad0j4yfbx", - "depends": ["BiocParallel", "doParallel", "Matrix", "Rdpack"] + "depends": ["BiocParallel", "Matrix", "Rdpack", "doParallel"] }, "oottest": { "name": "oottest", @@ -90035,13 +90971,13 @@ "name": "opGMMassessment", "version": "0.4", "sha256": "0qnxq9i0spygz2lmjb23y94r9cgvkkariv0v8llqdb6l89bhfdqm", - "depends": ["AdaptGauss", "caTools", "cluster", "ClusterR", "DataVisualizations", "DistributionOptimization", "doParallel", "dplyr", "foreach", "ggplot2", "mclust", "mixAK", "mixtools", "multimode", "NbClust", "rlang"] + "depends": ["AdaptGauss", "ClusterR", "DataVisualizations", "DistributionOptimization", "NbClust", "caTools", "cluster", "doParallel", "dplyr", "foreach", "ggplot2", "mclust", "mixAK", "mixtools", "multimode", "rlang"] }, "opa": { "name": "opa", "version": "0.8.3", "sha256": "09k3bkh2glkl0sf5pcbii9cxq6ijpdsayncb02dm0ing2bh9kh0m", - "depends": ["lattice", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "lattice"] }, "opalr": { "name": "opalr", @@ -90059,7 +90995,7 @@ "name": "openCR", "version": "2.2.6", "sha256": "08cqv6xxv35hzllab0glb42h54racgqk0x3dvam6lk7c561kbas4", - "depends": ["abind", "BH", "MASS", "nlme", "plyr", "Rcpp", "RcppParallel", "secr", "stringr"] + "depends": ["BH", "MASS", "Rcpp", "RcppParallel", "abind", "nlme", "plyr", "secr", "stringr"] }, "openEBGM": { "name": "openEBGM", @@ -90071,7 +91007,7 @@ "name": "openMSE", "version": "1.0.0", "sha256": "15jp9hybnkwmnkcqawhpd3y3imq6wfxxzxzh90yx4cvzky36hf89", - "depends": ["crayon", "DLMtool", "MSEtool", "SAMtool"] + "depends": ["DLMtool", "MSEtool", "SAMtool", "crayon"] }, "openNLP": { "name": "openNLP", @@ -90089,13 +91025,13 @@ "name": "openSkies", "version": "1.2.1", "sha256": "0ky11gpgnf2afv6kzhwbzwzrmril99ixxxzzmav3h9hzcig3igyj", - "depends": ["cluster", "DBI", "dbscan", "ggmap", "ggplot2", "httr", "magick", "R6", "RPresto", "ssh", "xml2"] + "depends": ["DBI", "R6", "RPresto", "cluster", "dbscan", "ggmap", "ggplot2", "httr", "magick", "ssh", "xml2"] }, "openVA": { "name": "openVA", "version": "1.1.2", "sha256": "0ywf9hh4liz992ym1xdqpk4pnywy9azasyvqdy3ih8idmj3y5h0d", - "depends": ["cli", "crayon", "ggplot2", "InSilicoVA", "InterVA4", "InterVA5", "Tariff"] + "depends": ["InSilicoVA", "InterVA4", "InterVA5", "Tariff", "cli", "crayon", "ggplot2"] }, "openai": { "name": "openai", @@ -90107,7 +91043,7 @@ "name": "openair", "version": "2.18-2", "sha256": "1pw4bdqkd515n7fdcjavjmanhpaywxamzywgiaz4nk5bqq5mh84b", - "depends": ["cli", "cluster", "dplyr", "hexbin", "lattice", "latticeExtra", "lubridate", "mapproj", "MASS", "mgcv", "purrr", "Rcpp", "readr", "rlang", "tibble", "tidyr"] + "depends": ["MASS", "Rcpp", "cli", "cluster", "dplyr", "hexbin", "lattice", "latticeExtra", "lubridate", "mapproj", "mgcv", "purrr", "readr", "rlang", "tibble", "tidyr"] }, "openairmaps": { "name": "openairmaps", @@ -90119,12 +91055,12 @@ "name": "openaistream", "version": "0.3.0", "sha256": "0zihkpq6p7a3n0qdwpazds4qbpagk7zh6ziflm9194vbygyskv2z", - "depends": ["curl", "httr2", "iterators", "jsonlite", "R6"] + "depends": ["R6", "curl", "httr2", "iterators", "jsonlite"] }, "openalexR": { "name": "openalexR", - "version": "1.3.1", - "sha256": "1hhsqzplcp0xr70q9g5k45ra92c3i9rnk4xdbjnjzwyqhmjf1fiw", + "version": "1.4.0", + "sha256": "14bhwbkwxaj8vjrix7klhqqxrfkaybd83dxkvxhpnsfr7yqhls3q", "depends": ["httr", "jsonlite", "progress", "tibble"] }, "openbankeR": { @@ -90147,15 +91083,15 @@ }, "opencpu": { "name": "opencpu", - "version": "2.2.12", - "sha256": "144rq0lyag4b93gshjaf4zghshnvx5vcbnahy4x43f22r0zq5gkv", + "version": "2.2.13", + "sha256": "1gyfgv5w9bi1lng8xzkpnqr50x90qshb1q4927jxzl5l4vdzlahn", "depends": ["brew", "curl", "evaluate", "httpuv", "jsonlite", "knitr", "mime", "openssl", "protolite", "rappdirs", "remotes", "rlang", "sys", "vctrs", "webutils", "zip"] }, "opencv": { "name": "opencv", "version": "0.4.0", "sha256": "0bplljn5qpgb3yp3jlmr99vrffqr53q8hlznbzpmj78kn5f1j71y", - "depends": ["magrittr", "Rcpp"] + "depends": ["Rcpp", "magrittr"] }, "opendatatoronto": { "name": "opendatatoronto", @@ -90173,7 +91109,7 @@ "name": "openeo", "version": "1.3.1", "sha256": "02rm34mgjhcb3pp71x0rspyz7cmpmj4g5rs93xnly304il8v0rx2", - "depends": ["base64enc", "htmltools", "httr2", "IRdisplay", "jsonlite", "lubridate", "R6", "rlang", "sf"] + "depends": ["IRdisplay", "R6", "base64enc", "htmltools", "httr2", "jsonlite", "lubridate", "rlang", "sf"] }, "openintro": { "name": "openintro", @@ -90195,33 +91131,33 @@ }, "openssl": { "name": "openssl", - "version": "2.2.0", - "sha256": "1cyx2yv2l446xwf0a0im70zfd6jlpg8113ncgdydajyvx1mb9f0q", + "version": "2.2.1", + "sha256": "13gp6q8s0pdjvnd7mnmdqhmmsb0mf4m3snq99j6js8c4sll27895", "depends": ["askpass"] }, "opentripplanner": { "name": "opentripplanner", "version": "0.5.2", "sha256": "0h0dq72gfiyhnl9j8pdr295a93xcd59mqag4ca5hnvq8v93hn0cc", - "depends": ["checkmate", "curl", "data_table", "geodist", "googlePolylines", "progressr", "purrr", "RcppSimdJson", "rjson", "sf", "sfheaders"] + "depends": ["RcppSimdJson", "checkmate", "curl", "data_table", "geodist", "googlePolylines", "progressr", "purrr", "rjson", "sf", "sfheaders"] }, "openxlsx": { "name": "openxlsx", - "version": "4.2.5.2", - "sha256": "0rwvzhk2brhbf1cdpg5jmwiwx5jhr9ybzvnhw0pg4bl3wpkqjw7f", + "version": "4.2.6.1", + "sha256": "1absl7kl3gzg2rwjv3qj74clcyj6xgfbxc6232ddi8fnll3ca262", "depends": ["Rcpp", "stringi", "zip"] }, "openxlsx2": { "name": "openxlsx2", - "version": "1.7", - "sha256": "0kkkb755z2wqyjszpqsq3db489qblbkq733lr83sj01b00chw0sy", - "depends": ["magrittr", "R6", "Rcpp", "stringi", "zip"] + "version": "1.8", + "sha256": "1gicp19n8y4hid0mh3yig9cx6p0b25f56v6ndb4pggzzlff3s994", + "depends": ["R6", "Rcpp", "magrittr", "stringi", "zip"] }, "opera": { "name": "opera", "version": "1.2.0", "sha256": "09gh0c74y3n25f9p1rya8ybql5mfaqkcnr8i8wwwzfm67vqdfrnh", - "depends": ["alabama", "htmltools", "htmlwidgets", "pipeR", "rAmCharts", "Rcpp", "RcppEigen", "Rdpack"] + "depends": ["Rcpp", "RcppEigen", "Rdpack", "alabama", "htmltools", "htmlwidgets", "pipeR", "rAmCharts"] }, "operator_tools": { "name": "operator.tools", @@ -90251,13 +91187,13 @@ "name": "oppr", "version": "1.0.4", "sha256": "1kyzrpr09fmx7rhbgwy5d1s8ggl7avcrs4vjb9s6m03w756zbb3a", - "depends": ["ape", "assertthat", "cli", "ggplot2", "lpSolveAPI", "magrittr", "Matrix", "proto", "Rcpp", "RcppArmadillo", "RcppProgress", "tibble", "tidytree", "uuid", "viridisLite", "withr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "ape", "assertthat", "cli", "ggplot2", "lpSolveAPI", "magrittr", "proto", "tibble", "tidytree", "uuid", "viridisLite", "withr"] }, "optBiomarker": { "name": "optBiomarker", "version": "1.0-28", "sha256": "10i9ir0056qxyiayg10v6v25m1b94m1wd7c8ssigiqjhjncpddw5", - "depends": ["e1071", "ipred", "MASS", "Matrix", "msm", "randomForest", "rgl", "rpanel"] + "depends": ["MASS", "Matrix", "e1071", "ipred", "msm", "randomForest", "rgl", "rpanel"] }, "optDesignSlopeInt": { "name": "optDesignSlopeInt", @@ -90281,7 +91217,7 @@ "name": "optbdmaeAT", "version": "1.0.1", "sha256": "1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn", - "depends": ["igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "igraph"] }, "optbin": { "name": "optbin", @@ -90303,21 +91239,21 @@ }, "optiSel": { "name": "optiSel", - "version": "2.0.8", - "sha256": "1fgh9lb4pmis8wm9vr5p7883xnhx50r5a2swdy2vlhwpgcc3caqz", - "depends": ["data_table", "doParallel", "ECOSolveR", "foreach", "kinship2", "magic", "MASS", "Matrix", "nadiv", "optiSolve", "pedigree", "plyr", "pspline", "purrr", "quadprog", "Rcpp", "RcppArmadillo", "reshape2", "stringr"] + "version": "2.0.9", + "sha256": "0n1snxh05dsrgcgzl5xm65ghixja8yb1kbkxws9i0i1zy7qm6kzp", + "depends": ["ECOSolveR", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "data_table", "doParallel", "foreach", "kinship2", "magic", "nadiv", "optiSolve", "pedigree", "plyr", "pspline", "purrr", "quadprog", "reshape2", "stringr"] }, "optiSolve": { "name": "optiSolve", "version": "1.0", "sha256": "0mhl5gdz3y3cs3p6v7z4n50na3sqj0w739gixcf4qgb1ppx0h1xa", - "depends": ["alabama", "cccp", "MASS", "Matrix", "nloptr", "plyr", "Rcpp", "shapes", "stringr"] + "depends": ["MASS", "Matrix", "Rcpp", "alabama", "cccp", "nloptr", "plyr", "shapes", "stringr"] }, "optic": { "name": "optic", "version": "1.0.1", "sha256": "166ngas1zp1ln951n26kmyfj9jcpi2fm2g2yxs9vs4as6fl1yf2n", - "depends": ["did", "dplyr", "future_apply", "lmtest", "magrittr", "MASS", "purrr", "R6", "rlang", "sandwich", "tidyr"] + "depends": ["MASS", "R6", "did", "dplyr", "future_apply", "lmtest", "magrittr", "purrr", "rlang", "sandwich", "tidyr"] }, "optical": { "name": "optical", @@ -90335,7 +91271,7 @@ "name": "opticut", "version": "0.1-3", "sha256": "1knjxfz52gisnkz62m885zf4gn73dnkhc0q2wfvmhj02vqq0sfhf", - "depends": ["betareg", "MASS", "mefa4", "pbapply", "pscl", "ResourceSelection"] + "depends": ["MASS", "ResourceSelection", "betareg", "mefa4", "pbapply", "pscl"] }, "optifunset": { "name": "optifunset", @@ -90355,12 +91291,6 @@ "sha256": "1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g", "depends": ["lhs", "randtoolbox", "stringr"] }, - "optimCheck": { - "name": "optimCheck", - "version": "1.0", - "sha256": "1qjkv1mfyn7sw0dkxxcdaqj85vl71cgffpf3k3mvzy0s8yhxjb4n", - "depends": [] - }, "optimLanduse": { "name": "optimLanduse", "version": "1.2.1", @@ -90383,7 +91313,7 @@ "name": "optimalThreshold", "version": "1.0", "sha256": "1m39q36p7i7z31b90awriq5jf9rfybyw5lj3m1w33v2ssipkzp1n", - "depends": ["ars", "coda", "HDInterval", "mgcv", "rjags"] + "depends": ["HDInterval", "ars", "coda", "mgcv", "rjags"] }, "optimall": { "name": "optimall", @@ -90407,13 +91337,13 @@ "name": "optimization", "version": "1.0-9", "sha256": "1pg9a78hhm0h4pfagj13r1dmynv714knhw2dxhzhcvlgk9inpam8", - "depends": ["colorspace", "Rcpp"] + "depends": ["Rcpp", "colorspace"] }, "optimizeR": { "name": "optimizeR", - "version": "1.1.0", - "sha256": "07p7bjh0jhg74csh094473dflpc1va4p45laxbdwv3hbxagk1zkx", - "depends": ["checkmate", "cli", "lbfgsb3c", "oeli", "R6", "TestFunctions", "ucminf"] + "version": "1.1.1", + "sha256": "134828h3ibypam0k0xxmj7pj6pzx084in06rmbcxgc900ibbqgb4", + "depends": ["R6", "TestFunctions", "checkmate", "cli", "lbfgsb3c", "oeli", "ucminf"] }, "optimos_prime": { "name": "optimos.prime", @@ -90473,7 +91403,7 @@ "name": "optmatch", "version": "0.10.7", "sha256": "07bx6bs5kk9pv0a2nsvq5y4bq4z17sa5f54kpxpim476xd8w43rk", - "depends": ["dplyr", "Rcpp", "rlemon", "tibble"] + "depends": ["Rcpp", "dplyr", "rlemon", "tibble"] }, "optparse": { "name": "optparse", @@ -90485,37 +91415,37 @@ "name": "optpart", "version": "3.0-3", "sha256": "18h659gbgzflq81lcchc058xjgljkmhpsjkh51ylygwrv1qjrz2i", - "depends": ["cluster", "labdsv", "MASS", "plotrix"] + "depends": ["MASS", "cluster", "labdsv", "plotrix"] }, "optrcdmaeAT": { "name": "optrcdmaeAT", "version": "1.0.0", "sha256": "16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h", - "depends": ["igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "igraph"] }, "optrefine": { "name": "optrefine", "version": "1.1.0", "sha256": "1ijahjraiaax0xyr1y4s3aq1b4xk8h7ablrvy2m2fr879q3xfi9i", - "depends": ["ggplot2", "MASS", "Rglpk", "sampling"] + "depends": ["MASS", "Rglpk", "ggplot2", "sampling"] }, "optweight": { "name": "optweight", "version": "0.2.5", "sha256": "1mfk9sp47flqq7i762wip5191j8m0q9kbyxs4a7f0pd76qwf67q2", - "depends": ["ggplot2", "Matrix", "osqp"] + "depends": ["Matrix", "ggplot2", "osqp"] }, "opusminer": { "name": "opusminer", "version": "0.1-1", "sha256": "1vw6pbk1iiaxmfws95wmwf56p3afk10s5c3x9f0lliamckpyzkck", - "depends": ["arules", "Matrix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "arules"] }, - "orbweaver": { - "name": "orbweaver", - "version": "0.10.2", - "sha256": "1n8gay2nsxh0pc1jc6hgs2n5knk5ajaaqisq2l5dsnkl172r62rf", - "depends": ["glue", "rlang"] + "orbital": { + "name": "orbital", + "version": "0.2.0", + "sha256": "167hpki2v1m8n0fpx3giy7pdc49lwcsn1qacgi38f7m8v0dca4ga", + "depends": ["cli", "dplyr", "rlang"] }, "orca": { "name": "orca", @@ -90545,7 +91475,7 @@ "name": "ordPens", "version": "1.1.0", "sha256": "1837d2rz42y71yq9rzzkc5pkywvyc4zbk7s4kg4kwrvxysg0y6p1", - "depends": ["glmpath", "grplasso", "mgcv", "ordinalNet", "quadprog", "RLRsim"] + "depends": ["RLRsim", "glmpath", "grplasso", "mgcv", "ordinalNet", "quadprog"] }, "ordbetareg": { "name": "ordbetareg", @@ -90569,13 +91499,13 @@ "name": "orderly", "version": "1.4.3", "sha256": "0k7xk64schhw9jdbg50hlnf6gfhlgnv1n20rz3fga02z38441xkn", - "depends": ["crayon", "DBI", "digest", "docopt", "fs", "gert", "ids", "R6", "RSQLite", "withr", "yaml", "zip"] + "depends": ["DBI", "R6", "RSQLite", "crayon", "digest", "docopt", "fs", "gert", "ids", "withr", "yaml", "zip"] }, "orders": { "name": "orders", "version": "0.1.8", "sha256": "05fq8mvqjvm4dir7zc7dxri3n6ar08afvrg49x8hbf920yqxkmq1", - "depends": ["actuar", "gamlss_dist", "Newdistns", "VGAM"] + "depends": ["Newdistns", "VGAM", "actuar", "gamlss_dist"] }, "orderstats": { "name": "orderstats", @@ -90587,7 +91517,7 @@ "name": "ordgam", "version": "0.9.1", "sha256": "0flldxv53qyiprq44670b4b98i791si3nmi983pgkzd8s39aa68l", - "depends": ["cubicBsplines", "marqLevAlg", "MASS", "Matrix", "mgcv", "numDeriv", "sn", "ucminf"] + "depends": ["MASS", "Matrix", "cubicBsplines", "marqLevAlg", "mgcv", "numDeriv", "sn", "ucminf"] }, "ordiBreadth": { "name": "ordiBreadth", @@ -90605,13 +91535,13 @@ "name": "ordinalCont", "version": "2.0.2", "sha256": "1azwcr1si3b8dxf2y59d3rxw4msfq79khzg7zgqd0kbzyka4ygl8", - "depends": ["boot", "Deriv"] + "depends": ["Deriv", "boot"] }, "ordinalForest": { "name": "ordinalForest", "version": "2.4-3", "sha256": "06blmwmn42dv6sri3j3473arrql5rihdlp7kgh56b2w1j2wdqq7s", - "depends": ["combinat", "nnet", "Rcpp", "verification"] + "depends": ["Rcpp", "combinat", "nnet", "verification"] }, "ordinalLBM": { "name": "ordinalLBM", @@ -90635,7 +91565,7 @@ "name": "ordinalbayes", "version": "0.1.1", "sha256": "13f9rv6gndjr18rfk60rmginzam1xjsssjn45l6hhl6y3gglsyzh", - "depends": ["coda", "dclone", "DESeq2", "devtools", "runjags", "SummarizedExperiment"] + "depends": ["DESeq2", "SummarizedExperiment", "coda", "dclone", "devtools", "runjags"] }, "ordinalgmifs": { "name": "ordinalgmifs", @@ -90671,7 +91601,7 @@ "name": "orf", "version": "0.1.4", "sha256": "1njcnya5f2wx50l7gyf53js16xj1y6pwgbghxq4nm4grf2ck3mz1", - "depends": ["ggplot2", "ranger", "Rcpp", "xtable"] + "depends": ["Rcpp", "ggplot2", "ranger", "xtable"] }, "org": { "name": "org", @@ -90731,7 +91661,7 @@ "name": "ormBigData", "version": "0.0.1", "sha256": "1rq202k4assmij21bjjk1ba7121p5p3rp21k548cc6lk81xj1rcc", - "depends": ["benchmarkme", "doParallel", "foreach", "Hmisc", "iterators", "rms", "SparseM"] + "depends": ["Hmisc", "SparseM", "benchmarkme", "doParallel", "foreach", "iterators", "rms"] }, "ormPlot": { "name": "ormPlot", @@ -90749,7 +91679,7 @@ "name": "oro.nifti", "version": "0.11.4", "sha256": "01mn90qxb7i15zr83xrl2cn4akayfzpm83r5x71zczz3qb9gbr7g", - "depends": ["abind", "bitops", "RNifti"] + "depends": ["RNifti", "abind", "bitops"] }, "oro_pet": { "name": "oro.pet", @@ -90773,7 +91703,7 @@ "name": "orthoDr", "version": "0.6.8", "sha256": "0dsdmrmqib5mx57v0f32dw9ybydxh80h1xn0130nrw27268bqi52", - "depends": ["dr", "MASS", "plot3D", "pracma", "Rcpp", "RcppArmadillo", "rgl", "survival"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "dr", "plot3D", "pracma", "rgl", "survival"] }, "orthogonalsplinebasis": { "name": "orthogonalsplinebasis", @@ -90803,7 +91733,7 @@ "name": "oscar", "version": "1.2.1", "sha256": "1khyl3y8rpyn0skn45wcl1saa713fh48fv6vh3hfgyf46j8ibgra", - "depends": ["hamlet", "Matrix", "pROC", "survival"] + "depends": ["Matrix", "hamlet", "pROC", "survival"] }, "osd": { "name": "osd", @@ -90835,6 +91765,12 @@ "sha256": "1fsgz4jln3nk53bxpmjpc7dcapc9j1wdqlrab169ymvrlzypgvqc", "depends": [] }, + "osmapiR": { + "name": "osmapiR", + "version": "0.1.0", + "sha256": "1bdfi1ykw3vjlca44kpn69b0snz948r8nyvg3dn1ik89f8xc9sj7", + "depends": ["curl", "httr2", "xml2"] + }, "osmclass": { "name": "osmclass", "version": "0.1.3", @@ -90845,7 +91781,7 @@ "name": "osmdata", "version": "0.2.5", "sha256": "0073dnnznq479ffnizrv8wqmfiv3gmdmmlkmkh1hxgr7p32v1i4z", - "depends": ["curl", "httr2", "lubridate", "magrittr", "Rcpp", "reproj", "rvest", "tibble", "xml2"] + "depends": ["Rcpp", "curl", "httr2", "lubridate", "magrittr", "reproj", "rvest", "tibble", "xml2"] }, "osmextract": { "name": "osmextract", @@ -90863,13 +91799,13 @@ "name": "osrm", "version": "4.2.0", "sha256": "1256pksd8mxzxi1vnl6ghhyl8f7g2li4wabs0kllw9i54yxvc83b", - "depends": ["curl", "googlePolylines", "mapiso", "RcppSimdJson", "sf"] + "depends": ["RcppSimdJson", "curl", "googlePolylines", "mapiso", "sf"] }, "osrmr": { "name": "osrmr", "version": "0.1.36", "sha256": "1vnf6g1d9fjckz9ay910nb9gr1km2adwk3b0k460mxvpr36izkh7", - "depends": ["assertthat", "bitops", "R_utils", "rjson", "stringr"] + "depends": ["R_utils", "assertthat", "bitops", "rjson", "stringr"] }, "otargen": { "name": "otargen", @@ -90887,7 +91823,7 @@ "name": "otp", "version": "0.1.1", "sha256": "19fi2a4gi6fjhhkybrlx9chph2adjqqx4h1mc214cjn6m5bg37mq", - "depends": ["base64url", "openssl", "R6"] + "depends": ["R6", "base64url", "openssl"] }, "otpr": { "name": "otpr", @@ -90907,29 +91843,23 @@ "sha256": "0rca8ln9cyikfpsf1af550cfx2zx110c8jxv64xf8dnnd09s9h7b", "depends": ["doParallel", "foreach", "mclust", "mvtnorm", "robustbase"] }, - "otsad": { - "name": "otsad", - "version": "0.2.0", - "sha256": "1jb6raxm70aywbgs7bdyw8vccy1nj924f4hkpjrlgnvzmy0hyhvs", - "depends": ["ggplot2", "plotly", "reticulate", "sigmoid"] - }, "otsfeatures": { "name": "otsfeatures", "version": "1.0.0", "sha256": "1akny7bdls9ddvkpm906ih9h7bc5sgnj03z7kkzbpy703d1y6krr", - "depends": ["astsa", "Bolstad2", "ggplot2", "latex2exp", "Rdpack"] + "depends": ["Bolstad2", "Rdpack", "astsa", "ggplot2", "latex2exp"] }, "ottr": { "name": "ottr", "version": "1.5.0", "sha256": "1b1p957plsx09xfa4qwqk2bnib1hnbikrsdn2cll17b8pfwrp29k", - "depends": ["jsonlite", "R6", "testthat", "zip"] + "depends": ["R6", "jsonlite", "testthat", "zip"] }, "ottrpal": { "name": "ottrpal", "version": "1.2.1", "sha256": "0wjavfgn9cjk83bsrcj820nxairb5jxszryqzppwwbjf844vi17y", - "depends": ["bookdown", "curl", "dplyr", "fs", "glue", "httr", "jsonlite", "knitr", "magrittr", "openssl", "purrr", "R_utils", "readr", "rmarkdown", "rprojroot", "rvest", "stringr", "xml2", "yaml"] + "depends": ["R_utils", "bookdown", "curl", "dplyr", "fs", "glue", "httr", "jsonlite", "knitr", "magrittr", "openssl", "purrr", "readr", "rmarkdown", "rprojroot", "rvest", "stringr", "xml2", "yaml"] }, "otuSummary": { "name": "otuSummary", @@ -90939,8 +91869,8 @@ }, "ouch": { "name": "ouch", - "version": "2.19", - "sha256": "15ryd76max77zwjlbijj4v7h42mscr4zqg8b01cq3gsr51l8bwkf", + "version": "2.20", + "sha256": "1r1nj4m2hw4gdaw596q14d6majcz15ppa0mfhfl8f791phcyarka", "depends": ["subplex"] }, "outForest": { @@ -90953,7 +91883,7 @@ "name": "outbreaker2", "version": "1.1.3", "sha256": "06wlmf51ciy7zy5nchfn2myvkwrvq44cnzzjl75vz32ixn8iy56v", - "depends": ["ape", "ggplot2", "magrittr", "Rcpp", "visNetwork"] + "depends": ["Rcpp", "ape", "ggplot2", "magrittr", "visNetwork"] }, "outbreaks": { "name": "outbreaks", @@ -90971,7 +91901,7 @@ "name": "outlierensembles", "version": "0.1.0", "sha256": "0m2iaf3rbpwvyrjz6qglbrinmz676hnbqqm6vc38zb3k3cjcllaq", - "depends": ["airt", "apcluster", "EstCRM", "psych"] + "depends": ["EstCRM", "airt", "apcluster", "psych"] }, "outliers": { "name": "outliers", @@ -90983,7 +91913,7 @@ "name": "outliers.ts.oga", "version": "0.0.1", "sha256": "1v10v4nw7xkrranv4pa4xqw3cayb1lq2p3qda76w6vxxwfch32pi", - "depends": ["caret", "forecast", "gsarima", "parallelly", "robust", "SLBDD"] + "depends": ["SLBDD", "caret", "forecast", "gsarima", "parallelly", "robust"] }, "outliertree": { "name": "outliertree", @@ -91027,6 +91957,18 @@ "sha256": "1s16x5kn0apb0w1f7hqzcsqvw3x621y5n6yr1qn7yb7431pdw3cz", "depends": ["bigmemory"] }, + "overtureR": { + "name": "overtureR", + "version": "0.2.1", + "sha256": "07m6ly4wci51zsrszznpcds9z8acv4lajf29s8icn21xkfsnr32f", + "depends": ["DBI", "dbplyr", "dplyr", "duckdb", "glue", "rlang", "sf"] + }, + "overturemapsr": { + "name": "overturemapsr", + "version": "0.0.4", + "sha256": "176vh7gp6ijqb4dqnk3shhrs1q0x3gz0gj1w24a7qrcp5zdp24ff", + "depends": ["arrow", "dplyr", "sf"] + }, "overviewR": { "name": "overviewR", "version": "0.0.13", @@ -91059,9 +92001,9 @@ }, "ows4R": { "name": "ows4R", - "version": "0.3-6", - "sha256": "1nzvvkixgcqpz0hxzb4fyby5c3rlh0ac3i5q00wz3w3bhhdzrdcb", - "depends": ["geometa", "httr", "keyring", "openssl", "R6", "sf", "terra", "XML"] + "version": "0.4", + "sha256": "0isp6f4q900yzx2fbm3nflm7ngpvycz33a6i1zilcjxsbyjkhxxk", + "depends": ["R6", "XML", "crayon", "geometa", "httr", "keyring", "openssl", "sf", "terra"] }, "ox": { "name": "ox", @@ -91103,7 +92045,7 @@ "name": "pARI", "version": "1.1.1", "sha256": "17dxrs4ckxh70d33n93bxr0gzsidychnyclwvnb42cqfplbndca5", - "depends": ["ARIbrain", "matrixStats", "plyr", "Rcpp", "RcppArmadillo", "RNifti"] + "depends": ["ARIbrain", "RNifti", "Rcpp", "RcppArmadillo", "matrixStats", "plyr"] }, "pAnalysis": { "name": "pAnalysis", @@ -91121,19 +92063,25 @@ "name": "pCODE", "version": "0.9.4", "sha256": "17igf35324r0dkjff7m4v9zlhsbpw4k1idvgswq3mvv449jvybsa", - "depends": ["deSolve", "fda", "MASS", "pracma"] + "depends": ["MASS", "deSolve", "fda", "pracma"] }, "pCalibrate": { "name": "pCalibrate", "version": "0.2-1", "sha256": "0gi4hjnykn4gbj9krmw4z1qy4lbxkvacczkks3zkwalw9ylwkpxl", - "depends": ["exact2x2", "MCMCpack"] + "depends": ["MCMCpack", "exact2x2"] + }, + "pEPA": { + "name": "pEPA", + "version": "1.0", + "sha256": "1a2jij7rwkcf77krwgazldbgh0hjg7dg0911x7np42sjgiqn2li5", + "depends": [] }, "pGPx": { "name": "pGPx", "version": "0.1.4", "sha256": "037grwk41z5zdcw6nc004x5hj5s6q8y7zck417ylgyygsvgazhsf", - "depends": ["DiceKriging", "KrigInv", "pbivnorm", "pracma", "randtoolbox", "Rcpp", "RcppArmadillo", "rgenoud"] + "depends": ["DiceKriging", "KrigInv", "Rcpp", "RcppArmadillo", "pbivnorm", "pracma", "randtoolbox", "rgenoud"] }, "pGRN": { "name": "pGRN", @@ -91157,7 +92105,7 @@ "name": "pROC", "version": "1.18.5", "sha256": "129cnh3kh9sr42nc7n9f14kr9svi3501834x40njynnzlr0wi4sm", - "depends": ["plyr", "Rcpp"] + "depends": ["Rcpp", "plyr"] }, "pRSR": { "name": "pRSR", @@ -91189,6 +92137,12 @@ "sha256": "0rjq0b68qh5ayn5nd174bw6h7d707fy4kli1zi74vj4yc51z0las", "depends": ["ggplot2"] }, + "paar": { + "name": "paar", + "version": "1.0.1", + "sha256": "1yc5yqx1rdvmkwz0pmzbdlpbnb4vxxhzyp0h5j74nzk22j9332f3", + "depends": ["data_table", "e1071", "gstat", "sf", "spdep"] + }, "pack": { "name": "pack", "version": "0.1-1", @@ -91199,19 +92153,19 @@ "name": "packDAMipd", "version": "1.1.0", "sha256": "0y81ap4nhvfc5k0xfcbghnf32svgkx8p01g0md3hzhyfvmgjffqm", - "depends": ["broom", "car", "data_table", "dplyr", "effects", "flextable", "ggplot2", "ggpubr", "gvlma", "hash", "haven", "IPDFileCheck", "ISLR", "labelled", "lme4", "lmtest", "MASS", "purrr", "readxl", "relaimpo", "reshape2", "rlang", "stringr", "survival", "survminer", "SurvRegCensCov", "systemfit", "tidyr", "valueEQ5D"] + "depends": ["IPDFileCheck", "ISLR", "MASS", "SurvRegCensCov", "broom", "car", "data_table", "dplyr", "effects", "flextable", "ggplot2", "ggpubr", "gvlma", "hash", "haven", "labelled", "lme4", "lmtest", "purrr", "readxl", "relaimpo", "reshape2", "rlang", "stringr", "survival", "survminer", "systemfit", "tidyr", "valueEQ5D"] }, "packHV": { "name": "packHV", "version": "2.2", "sha256": "0bj7zhlz2283y1hfdqdn7xil4wscwri1f5hszarwjwczx4n5sv81", - "depends": ["survival", "WriteXLS"] + "depends": ["WriteXLS", "survival"] }, "packMBPLSDA": { "name": "packMBPLSDA", "version": "0.9.0", "sha256": "1d9plb88d4hic6881ibij888ic3p65d0ijlsyxcghi93ag3wsfj3", - "depends": ["ade4", "doParallel", "FactoMineR", "foreach", "MASS", "pROC"] + "depends": ["FactoMineR", "MASS", "ade4", "doParallel", "foreach", "pROC"] }, "packageDiff": { "name": "packageDiff", @@ -91221,9 +92175,9 @@ }, "packageRank": { "name": "packageRank", - "version": "0.9.1", - "sha256": "1d8savfry05xy3lxd5yhvmpky34563y433yxqsa2v6p252s6d6p7", - "depends": ["cranlogs", "curl", "data_table", "ggplot2", "ISOcodes", "memoise", "pkgsearch", "R_utils", "RCurl", "rlang", "rversions", "sugrrants"] + "version": "0.9.2", + "sha256": "0k5lby2gfvqa6d9r0js3n9k6s62cnj2b31vrpik6wf4nbrps709m", + "depends": ["ISOcodes", "RCurl", "R_utils", "cranlogs", "curl", "data_table", "ggplot2", "memoise", "pkgsearch", "rlang", "rversions", "sugrrants"] }, "packagefinder": { "name": "packagefinder", @@ -91277,7 +92231,7 @@ "name": "pacotest", "version": "0.4.2", "sha256": "0zdrvcrf6ynid2wpngdslxzkpc4grcvrf6bzbrni9rvp94sfzjlf", - "depends": ["ggplot2", "gridExtra", "numDeriv", "Rcpp", "RcppArmadillo", "VineCopula"] + "depends": ["Rcpp", "RcppArmadillo", "VineCopula", "ggplot2", "gridExtra", "numDeriv"] }, "pacs": { "name": "pacs", @@ -91289,7 +92243,7 @@ "name": "padr", "version": "0.6.2", "sha256": "0mgjdva2yj9m0mps69gafy3w1c4zhik002b5b2j2zvbv3m34mw97", - "depends": ["dplyr", "lubridate", "Rcpp", "rlang"] + "depends": ["Rcpp", "dplyr", "lubridate", "rlang"] }, "pafdR": { "name": "pafdR", @@ -91317,8 +92271,8 @@ }, "pagenum": { "name": "pagenum", - "version": "1.2", - "sha256": "0nid26wmrm76ifxqpqqry232q4alf80i7df1rg237qil8asx06k1", + "version": "1.3", + "sha256": "0gcy9gsjb75v9wc03n1yazxnf1b4v5x8w4mwlsvv9d42kbx1ib3r", "depends": [] }, "pageviews": { @@ -91331,7 +92285,7 @@ "name": "pagoda2", "version": "1.0.12", "sha256": "1kck12ri52nwsrxhjs8ghjji3rv1dxxjy8bxn1kk1hbg30265fsw", - "depends": ["dendsort", "drat", "fastcluster", "igraph", "irlba", "magrittr", "MASS", "Matrix", "mgcv", "N2R", "plyr", "R_utils", "R6", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "rjson", "rlang", "RMTstat", "Rook", "Rtsne", "sccore", "urltools"] + "depends": ["MASS", "Matrix", "N2R", "R6", "RMTstat", "R_utils", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "Rook", "Rtsne", "dendsort", "drat", "fastcluster", "igraph", "irlba", "magrittr", "mgcv", "plyr", "rjson", "rlang", "sccore", "urltools"] }, "painbow": { "name": "painbow", @@ -91373,7 +92327,7 @@ "name": "pairwiseCI", "version": "0.1-27", "sha256": "0yp9nibdrsddjqq6vdlfbpvmfgm209h99b6qqqd6wgfzng327822", - "depends": ["boot", "coin", "MASS", "MCPAN", "mcprofile"] + "depends": ["MASS", "MCPAN", "boot", "coin", "mcprofile"] }, "pak": { "name": "pak", @@ -91385,7 +92339,7 @@ "name": "palaeoSig", "version": "2.1-3", "sha256": "121akb42lqzp2vvfj6kjlaxsivxd71r7vnwyg6pcymkin94r8c3k", - "depends": ["assertr", "dplyr", "forcats", "ggplot2", "ggrepel", "magrittr", "MASS", "mgcv", "purrr", "rioja", "rlang", "TeachingDemos", "tibble", "tidyr", "vegan"] + "depends": ["MASS", "TeachingDemos", "assertr", "dplyr", "forcats", "ggplot2", "ggrepel", "magrittr", "mgcv", "purrr", "rioja", "rlang", "tibble", "tidyr", "vegan"] }, "palaeoverse": { "name": "palaeoverse", @@ -91397,7 +92351,7 @@ "name": "palasso", "version": "0.0.9", "sha256": "1qx6xa1csa4dz4vjr0q83pr22yxy01dzzqrjp5mxqqm6265wxqdh", - "depends": ["glmnet", "Matrix", "survival"] + "depends": ["Matrix", "glmnet", "survival"] }, "pald": { "name": "pald", @@ -91437,9 +92391,9 @@ }, "paleotree": { "name": "paleotree", - "version": "3.4.5", - "sha256": "09fi0fq0xpxa4d3k7fhl6rvfc302gzmjrxm979j30ixpa8rypp64", - "depends": ["ape", "jsonlite", "phangorn", "phytools", "png", "RCurl"] + "version": "3.4.7", + "sha256": "05v35w84xm186mc0f9k53fpgfx4ihfvj7523jh0ba1crjakwha6b", + "depends": ["RCurl", "ape", "jsonlite", "phangorn", "phytools", "png"] }, "palette": { "name": "palette", @@ -91461,8 +92415,8 @@ }, "palettes": { "name": "palettes", - "version": "0.2.0", - "sha256": "1clgzlhyg2iw1mgf7v6nx6vs4bvqs83c6431i59vgkmz0qbgqfik", + "version": "0.2.1", + "sha256": "0s0pdza87jq5p7biq4vnajl59gnw77m2yi0x05gb31nmvcicxf2b", "depends": ["cli", "farver", "ggplot2", "pillar", "prismatic", "purrr", "rlang", "scales", "tibble", "vctrs"] }, "palettesForR": { @@ -91487,7 +92441,7 @@ "name": "palm", "version": "1.1.5", "sha256": "108w8vsb41j1kwvymjcf5123xi8qiprcpiqynlvvfk1bp24jaz45", - "depends": ["gsl", "minqa", "mvtnorm", "R6", "Rcpp"] + "depends": ["R6", "Rcpp", "gsl", "minqa", "mvtnorm"] }, "palmerpenguins": { "name": "palmerpenguins", @@ -91509,8 +92463,8 @@ }, "pals": { "name": "pals", - "version": "1.8", - "sha256": "0z6lkvkq7b3wsxvizljf08sjqrdcj33p5kdx6074pc5jv36dylhb", + "version": "1.9", + "sha256": "1rnm6yvql39b4gbly90svbb5n9m66gc7f0abrxzkll6vsn71xfar", "depends": ["colorspace", "dichromat", "mapproj", "maps"] }, "pamm": { @@ -91523,7 +92477,7 @@ "name": "pammtools", "version": "0.5.93", "sha256": "0xihvszndsnzzh3kzn67yqqdxms5pba609lvlg68k3gfxbxk104l", - "depends": ["checkmate", "dplyr", "Formula", "ggplot2", "lazyeval", "magrittr", "mgcv", "mvtnorm", "pec", "purrr", "rlang", "survival", "tibble", "tidyr", "vctrs"] + "depends": ["Formula", "checkmate", "dplyr", "ggplot2", "lazyeval", "magrittr", "mgcv", "mvtnorm", "pec", "purrr", "rlang", "survival", "tibble", "tidyr", "vctrs"] }, "pampe": { "name": "pampe", @@ -91533,8 +92487,8 @@ }, "pamr": { "name": "pamr", - "version": "1.56.2", - "sha256": "0n7wpgzdadngj44ddsg3171wap4qhiaap75ndr6g768r3mv6q119", + "version": "1.57", + "sha256": "0gdgaspan6j4qw98357mdk7rs6r1abzzfrp63jzf99gi41v8z5h1", "depends": ["cluster", "survival"] }, "pan": { @@ -91547,7 +92501,7 @@ "name": "pander", "version": "0.6.5", "sha256": "144zkq5w7v6fpzk3x40i0baybbp0y6x2ckh4b9qljryas9mhgp9a", - "depends": ["digest", "Rcpp"] + "depends": ["Rcpp", "digest"] }, "pandoc": { "name": "pandoc", @@ -91571,7 +92525,7 @@ "name": "panelSUR", "version": "0.1.0", "sha256": "025p6dqd7fxa0nh07mwrkbvi5cb6jsfx28kskqvzf8zvar6rbr41", - "depends": ["fastmatrix", "formula_tools", "MASS", "matlib", "plm"] + "depends": ["MASS", "fastmatrix", "formula_tools", "matlib", "plm"] }, "panelView": { "name": "panelView", @@ -91583,7 +92537,7 @@ "name": "panelWranglR", "version": "1.2.13", "sha256": "0zj0m08518zi6xsa7qik61ys1qqa2lqiar4l7acclkw58w5zrmbc", - "depends": ["caret", "data_table", "Hmisc"] + "depends": ["Hmisc", "caret", "data_table"] }, "panelaggregation": { "name": "panelaggregation", @@ -91595,13 +92549,13 @@ "name": "panelhetero", "version": "1.0.1", "sha256": "12csjgcjxwl7fxlqib0vgywf32frd7jri3dj9lyq5fmz9riqkdix", - "depends": ["boot", "ggplot2", "KernSmooth", "Rearrangement"] + "depends": ["KernSmooth", "Rearrangement", "boot", "ggplot2"] }, "panelr": { "name": "panelr", "version": "0.7.8", "sha256": "0vq7f91lqpd0n507lswgj7zpp56dzps3zcvbgsp2ivaj3c9vy0s5", - "depends": ["crayon", "dplyr", "Formula", "ggplot2", "jtools", "lme4", "lmerTest", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["Formula", "crayon", "dplyr", "ggplot2", "jtools", "lme4", "lmerTest", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "panelsummary": { "name": "panelsummary", @@ -91613,7 +92567,7 @@ "name": "panelvar", "version": "0.5.5", "sha256": "15bks8aqy29rslgbjp4w8xw7w2mcpgcc77bya7a9jcs5715j9xdb", - "depends": ["ggplot2", "knitr", "MASS", "Matrix", "matrixcalc", "progress", "reshape2", "texreg"] + "depends": ["MASS", "Matrix", "ggplot2", "knitr", "matrixcalc", "progress", "reshape2", "texreg"] }, "pangaear": { "name": "pangaear", @@ -91637,7 +92591,7 @@ "name": "papci", "version": "0.1.0", "sha256": "0ma1pfwgmj6qcg23yzhbnqip4qnxhsmfnvrgrr3ln65q5plmvh58", - "depends": ["binom", "dplyr", "DT", "Hmisc", "PropCIs", "ratesci", "readxl", "shiny", "shinythemes", "tidyverse"] + "depends": ["DT", "Hmisc", "PropCIs", "binom", "dplyr", "ratesci", "readxl", "shiny", "shinythemes", "tidyverse"] }, "papeR": { "name": "papeR", @@ -91661,13 +92615,13 @@ "name": "parTimeROC", "version": "0.1.0", "sha256": "0rshkjckv0llzgp2yywrbz55ahbzcq140k78wwwsjlwymjfxim9f", - "depends": ["BH", "cubature", "DescTools", "flexsurv", "Matrix", "moments", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sn", "StanHeaders", "survival", "VineCopula"] + "depends": ["BH", "DescTools", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "VineCopula", "cubature", "flexsurv", "moments", "mvtnorm", "rstan", "rstantools", "sn", "survival"] }, "parabar": { "name": "parabar", "version": "1.1.1", "sha256": "1hhhcxaap1ih4chf5l2c8mqkv9i4bsqml64ak3nfydsi4znymha4", - "depends": ["callr", "filelock", "progress", "R6"] + "depends": ["R6", "callr", "filelock", "progress"] }, "parade": { "name": "parade", @@ -91677,9 +92631,9 @@ }, "paradox": { "name": "paradox", - "version": "1.0.0", - "sha256": "0lll3sjyn0hmxfzg71zk53f3fddibvq7762ax7gxjgiy6zgi9mny", - "depends": ["backports", "checkmate", "data_table", "mlr3misc", "R6"] + "version": "1.0.1", + "sha256": "120ll8xrdg9s7ip0053m0i83gshxh3n79spsfwv6dzjwsj3mmpkj", + "depends": ["R6", "backports", "checkmate", "data_table", "mlr3misc"] }, "parallelDist": { "name": "parallelDist", @@ -91701,21 +92655,21 @@ }, "parallelPlot": { "name": "parallelPlot", - "version": "0.3.1", - "sha256": "12rpzcz1nc8c9rnsdg7kx6gh98plhp2jv22h58gg5gyl0pcsh2hx", + "version": "0.4.0", + "sha256": "0lchizczzsn3b147lkq3ws7zlx2106fxn6776jqkvch5aph1mrqw", "depends": ["htmlwidgets"] }, "parallelly": { "name": "parallelly", - "version": "1.37.1", - "sha256": "189ngbh9i6mqmfn4z6446in7687ddlpdq6v5rj3hr8zqinqlwznz", + "version": "1.38.0", + "sha256": "1ani63idvsx2apg3q2h9smi3sx7wbwpwpwjz585q9fyichy84b33", "depends": [] }, "parallelpam": { "name": "parallelpam", - "version": "1.4", - "sha256": "0iv11jqr9040rnw7hkfdj4vq4s7lhzz6as7f0zcy6jm36b3hllh2", - "depends": ["memuse", "Rcpp"] + "version": "1.4.3", + "sha256": "0dq50b3nrmzjjn1p05iykvvnl5g4pyx7jl552czfprsjw4wx7ans", + "depends": ["Rcpp", "memuse"] }, "param2moment": { "name": "param2moment", @@ -91723,23 +92677,29 @@ "sha256": "1k5zgzi985hglk5xh0qan6f6bsayln6vq1jykrxyxlffvpbc4hg1", "depends": [] }, + "paramDemo": { + "name": "paramDemo", + "version": "1.0.1", + "sha256": "165fz12cqpc88cmfx0xq80dnbxgkmbn8v84dxv96ggh9jsxh06d9", + "depends": [] + }, "paramGUI": { "name": "paramGUI", "version": "2.2.0", "sha256": "16z7fbrykyfysiqfrj00ks567wwrz2mpcwx75crbg45spdw0dck6", - "depends": ["fields", "shiny", "shinydashboard", "TIMP"] + "depends": ["TIMP", "fields", "shiny", "shinydashboard"] }, "parameters": { "name": "parameters", - "version": "0.21.7", - "sha256": "1br7mxfmb58f0kcinb1cyr7zvw1l37zhidsqf6280zyqqwdg46ir", + "version": "0.22.1", + "sha256": "0axyl6iwa0x6yk340g5943v1d1q023z63smxf0j6033mdikf3xm4", "depends": ["bayestestR", "datawizard", "insight"] }, "paramhetero": { "name": "paramhetero", "version": "1.0.0", "sha256": "1zkwzmh3igkwfq87v3rmp3axfspl20qn4qmpyqql6ain564yyabw", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "paramlink": { "name": "paramlink", @@ -91757,7 +92717,7 @@ "name": "params", "version": "0.7.3", "sha256": "0zii9nxgl2z46vyqn2l0kdjmib90534ybpizck74mp2wp1vh9ndj", - "depends": ["glue", "purrr", "RcppTOML", "readr", "whisker"] + "depends": ["RcppTOML", "glue", "purrr", "readr", "whisker"] }, "paramsim": { "name": "paramsim", @@ -91811,7 +92771,7 @@ "name": "parma", "version": "1.7", "sha256": "0rv53d3ailqh5a0qarpw9967ghnvslr2kcn02yn8xbkpcvnb7lfk", - "depends": ["corpcor", "nloptr", "quadprog", "Rglpk", "slam", "truncnorm"] + "depends": ["Rglpk", "corpcor", "nloptr", "quadprog", "slam", "truncnorm"] }, "parmigene": { "name": "parmigene", @@ -91829,7 +92789,7 @@ "name": "paropt", "version": "0.3.3", "sha256": "0rmiamj3s0s9qcymx74lmk266mrja3mxkflf32dpahnric9rvpsl", - "depends": ["ast2ast", "dfdr", "Rcpp", "RcppArmadillo", "RcppThread", "rlang"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "ast2ast", "dfdr", "rlang"] }, "parqr": { "name": "parqr", @@ -91841,7 +92801,7 @@ "name": "parquetize", "version": "0.5.7", "sha256": "0vmvjycyw4kihdx13wgi8qbynnaic96wgvw2hhdjz8fjrg1lb9sy", - "depends": ["arrow", "cli", "curl", "DBI", "dplyr", "fst", "glue", "haven", "jsonlite", "lifecycle", "readr", "rlang", "RSQLite", "tidyselect"] + "depends": ["DBI", "RSQLite", "arrow", "cli", "curl", "dplyr", "fst", "glue", "haven", "jsonlite", "lifecycle", "readr", "rlang", "tidyselect"] }, "parseRPDR": { "name": "parseRPDR", @@ -91865,13 +92825,13 @@ "name": "parsel", "version": "0.3.0", "sha256": "0d2sviaq94v5szd2qq1kdpirp3zyrx6r3kyins9xyfma9026770x", - "depends": ["lubridate", "purrr", "rlang", "RSelenium"] + "depends": ["RSelenium", "lubridate", "purrr", "rlang"] }, "parsermd": { "name": "parsermd", "version": "0.1.3", "sha256": "1xlqbgx65b137849f7w01xkkj2gi8sqfm0scjjzvxmi6kr0x5awh", - "depends": ["BH", "checkmate", "cli", "dplyr", "lifecycle", "magrittr", "pillar", "purrr", "Rcpp", "readr", "rlang", "rmarkdown", "tibble", "tidyr", "tidyselect", "withr", "yaml"] + "depends": ["BH", "Rcpp", "checkmate", "cli", "dplyr", "lifecycle", "magrittr", "pillar", "purrr", "readr", "rlang", "rmarkdown", "tibble", "tidyr", "tidyselect", "withr", "yaml"] }, "parsnip": { "name": "parsnip", @@ -91913,7 +92873,7 @@ "name": "partition", "version": "0.2.1", "sha256": "0nbhkzx4rp8zm6n49sf2kdzqkyfjh9032qbkpp4f4mnk5434z1qk", - "depends": ["crayon", "dplyr", "forcats", "ggplot2", "infotheo", "magrittr", "MASS", "pillar", "progress", "purrr", "Rcpp", "RcppArmadillo", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "crayon", "dplyr", "forcats", "ggplot2", "infotheo", "magrittr", "pillar", "progress", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "partitionBEFsp": { "name": "partitionBEFsp", @@ -91925,7 +92885,7 @@ "name": "partitionComparison", "version": "0.2.6", "sha256": "1z4ckjgjsq94wbnazb3335rcy6hhqh8pf9j5d22z6qkgfgxcv7w6", - "depends": ["lpSolve", "Rdpack"] + "depends": ["Rdpack", "lpSolve"] }, "partitionMetric": { "name": "partitionMetric", @@ -91937,7 +92897,7 @@ "name": "partitions", "version": "1.10-7", "sha256": "1kxiy1wl7dr39kyfg2y9hd67s32knd83r2jsb7j9p3vg8iqq7yqb", - "depends": ["gmp", "mathjaxr", "polynom", "Rdpack", "sets"] + "depends": ["Rdpack", "gmp", "mathjaxr", "polynom", "sets"] }, "partools": { "name": "partools", @@ -91959,14 +92919,14 @@ }, "party": { "name": "party", - "version": "1.3-15", - "sha256": "05r2mp7hfqxqnhk5wy73510x7yn1r15gww4mhxkvl9jm44p7rqn0", + "version": "1.3-17", + "sha256": "0jvxy9v30aazh9rkvhwz95gaq7s64sasdlsp9ckm1ks3wyqpdq7h", "depends": ["coin", "modeltools", "mvtnorm", "sandwich", "strucchange", "survival", "zoo"] }, "partykit": { "name": "partykit", - "version": "1.2-20", - "sha256": "1np0sa7fx7wvwxbpk5lpgbdpz0xwcvppq0sc52nifx1dxnirll33", + "version": "1.2-22", + "sha256": "1nqabizmy44c6ip7clg15wljwmd66p7jzzdb3xfsh40bjym1a00g", "depends": ["Formula", "inum", "libcoin", "mvtnorm", "rpart", "survival"] }, "parzer": { @@ -92011,11 +92971,17 @@ "sha256": "16a1rk903py7bm36wkywwspq927698k1kvv5h1h7ln6rcd2376r3", "depends": ["ggeffects", "ggplot2", "glmmTMB", "lme4"] }, + "pastboon": { + "name": "pastboon", + "version": "0.1.1", + "sha256": "17qaglv3hf0llkf5v16pdb8ym5p2lhxvhvaj025qpf60x20y6zmc", + "depends": [] + }, "pastclim": { "name": "pastclim", - "version": "2.0.0", - "sha256": "00zkf6flv4f5ljn0difpa8j3n221gvflsjnfdhfjbxnnw80qbyrp", - "depends": ["curl", "lubridate", "ncdf4", "terra"] + "version": "2.1.0", + "sha256": "0wdccbnb808wc2fr2ysr7z5i9d3rjgfdd8lcmgkipdprq0ymvqak", + "depends": ["curl", "lubridate", "ncdf4", "sf", "terra", "xml2"] }, "pasteAsComment": { "name": "pasteAsComment", @@ -92051,7 +93017,7 @@ "name": "patentr", "version": "0.1.4", "sha256": "14jxqaq306mpppzz14f0qw1d0brrrkcs121h5fdiskvly3vjvs1j", - "depends": ["dplyr", "lubridate", "magrittr", "progress", "Rcpp", "rlang", "xml2"] + "depends": ["Rcpp", "dplyr", "lubridate", "magrittr", "progress", "rlang", "xml2"] }, "patentsview": { "name": "patentsview", @@ -92069,7 +93035,7 @@ "name": "pathfindR", "version": "2.4.1", "sha256": "0lwjnw6krqz2yi39as07zcpyh13c6b4d0qxxhhqbqcms6anms7q3", - "depends": ["AnnotationDbi", "DBI", "doParallel", "foreach", "fpc", "ggkegg", "ggplot2", "ggraph", "ggupset", "httr", "igraph", "knitr", "msigdbr", "org_Hs_eg_db", "pathfindR_data", "R_utils", "rmarkdown"] + "depends": ["AnnotationDbi", "DBI", "R_utils", "doParallel", "foreach", "fpc", "ggkegg", "ggplot2", "ggraph", "ggupset", "httr", "igraph", "knitr", "msigdbr", "org_Hs_eg_db", "pathfindR_data", "rmarkdown"] }, "pathfindR_data": { "name": "pathfindR.data", @@ -92105,18 +93071,18 @@ "name": "pathviewr", "version": "1.1.7", "sha256": "0n3jv5zzwb7579ymv8s6vr7nzrc3gz5bi30yf6qvqixr8j0k4ggr", - "depends": ["cowplot", "data_table", "dplyr", "fANCOVA", "ggplot2", "lubridate", "magrittr", "purrr", "R_matlab", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["R_matlab", "cowplot", "data_table", "dplyr", "fANCOVA", "ggplot2", "lubridate", "magrittr", "purrr", "stringr", "tibble", "tidyr", "tidyselect"] }, "pathwayTMB": { "name": "pathwayTMB", "version": "0.1.3", "sha256": "1zrs7l9vifrsixk20p0nxs6s8kadc3l3mj933s7ribaby2fb0r8m", - "depends": ["BiocGenerics", "caret", "clusterProfiler", "data_table", "glmnet", "maftools", "pROC", "purrr", "randomForest", "RColorBrewer", "survival", "survminer"] + "depends": ["BiocGenerics", "RColorBrewer", "caret", "clusterProfiler", "data_table", "glmnet", "maftools", "pROC", "purrr", "randomForest", "survival", "survminer"] }, "patientProfilesVis": { "name": "patientProfilesVis", - "version": "2.0.8", - "sha256": "1ivc356cr6zsyggw6if43h135ynij9c36rg9p467945q8dcf4hcr", + "version": "2.0.9", + "sha256": "1jmf86dy5hvw81jc7n0hlhl6hwvcsi270bpq7vjj5r0zdlhgjgb7", "depends": ["clinUtils", "cowplot", "ggplot2", "gridExtra", "knitr", "plyr", "reshape2", "scales", "stringr"] }, "patrick": { @@ -92131,17 +93097,23 @@ "sha256": "0s4vrhdfblllnhpz2awhhrkwm8d4170xg7fpsp7kvvqy8z8biwvi", "depends": ["data_table"] }, + "patterncausality": { + "name": "patterncausality", + "version": "0.1.1", + "sha256": "0gsh7wca9ncs8ixsj2j3vz28ab7xfmvim1zzwrn3clgwp0g1rasf", + "depends": [] + }, "patternize": { "name": "patternize", "version": "0.0.5", "sha256": "1d0x27fy41sdxhmyj4cy01xxxcbyp4hvxjcybbmgg1r4ivi1sp08", - "depends": ["abind", "ClusterR", "dplyr", "geomorph", "imager", "magrittr", "Morpho", "purrr", "raster", "RNiftyReg", "sf", "sp", "vegan"] + "depends": ["ClusterR", "Morpho", "RNiftyReg", "abind", "dplyr", "geomorph", "imager", "magrittr", "purrr", "raster", "sf", "sp", "vegan"] }, "patternplot": { "name": "patternplot", "version": "1.0.0", "sha256": "0n4y23g894amwi62lx10k15i28rsmiaw52bds8dzmvkykkp9mm8q", - "depends": ["dplyr", "ggplot2", "gridExtra", "gtable", "jpeg", "png", "R6", "Rcpp", "RcppParallel"] + "depends": ["R6", "Rcpp", "RcppParallel", "dplyr", "ggplot2", "gridExtra", "gtable", "jpeg", "png"] }, "pavo": { "name": "pavo", @@ -92175,9 +93147,9 @@ }, "paws_common": { "name": "paws.common", - "version": "0.7.3", - "sha256": "1h7xsddwjhjx5n3fns16nhk249h6mypk80d3jp7lwpianhdll90m", - "depends": ["base64enc", "curl", "digest", "httr", "jsonlite", "Rcpp", "xml2"] + "version": "0.7.4", + "sha256": "0jrnliac0la9i9mlb95p07s3p7qkp3m79haz16bf8q3wdnc522i1", + "depends": ["Rcpp", "base64enc", "curl", "digest", "httr", "jsonlite", "xml2"] }, "paws_compute": { "name": "paws.compute", @@ -92255,7 +93227,7 @@ "name": "pbANOVA", "version": "0.1.0", "sha256": "0m7946jv4zbs0k74klxkl8nbwirc48g6paqrfl5fadkd17xxqq2j", - "depends": ["DescTools", "dplyr", "lmtest", "MASS", "plyr", "Rmisc"] + "depends": ["DescTools", "MASS", "Rmisc", "dplyr", "lmtest", "plyr"] }, "pbapply": { "name": "pbapply", @@ -92307,9 +93279,9 @@ }, "pbkrtest": { "name": "pbkrtest", - "version": "0.5.2", - "sha256": "1qxnd4pfpsq762x81s3vkw09wdwpfj25bba5474g7z506pqasycf", - "depends": ["broom", "dplyr", "lme4", "MASS", "Matrix", "numDeriv"] + "version": "0.5.3", + "sha256": "0qxswrk54r40qmi9ky7jzv53mrlr2w2mrlf1czma597nzrb52gmh", + "depends": ["MASS", "Matrix", "broom", "doBy", "dplyr", "lme4", "numDeriv"] }, "pbm": { "name": "pbm", @@ -92357,13 +93329,13 @@ "name": "pcFactorStan", "version": "1.5.4", "sha256": "09mjvgvdlc85246jgi4x99jr2x2j6c5vn3y3gwjxw61cmmyybqzf", - "depends": ["BH", "igraph", "lifecycle", "loo", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "reshape2", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "igraph", "lifecycle", "loo", "mvtnorm", "reshape2", "rstan", "rstantools"] }, "pcIRT": { "name": "pcIRT", "version": "0.2.4", "sha256": "0crll51s14nisnaxjln7bc3b1a181v358nfkh1p5iiyn98clacl6", - "depends": ["combinat", "Rcpp"] + "depends": ["Rcpp", "combinat"] }, "pcLasso": { "name": "pcLasso", @@ -92385,15 +93357,15 @@ }, "pcaPP": { "name": "pcaPP", - "version": "2.0-4", - "sha256": "0cw18pcbpsr5rc8fxbwnzfag5g76j4hscij7j08zlbyr2436gifn", + "version": "2.0-4-1", + "sha256": "04xqicm1c16ajhzvlg17w8y50qnbqjisj3xvgpi3k18idkmmf6xx", "depends": ["mvtnorm"] }, "pcadapt": { "name": "pcadapt", "version": "4.3.5", "sha256": "106h6xvqixi1lgrx1280f7jmdyc5k6da6j9vy49iq2gyma6v2q9v", - "depends": ["bigutilsr", "data_table", "ggplot2", "magrittr", "mmapcharr", "Rcpp", "rmio", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "bigutilsr", "data_table", "ggplot2", "magrittr", "mmapcharr", "rmio"] }, "pcal": { "name": "pcal", @@ -92405,7 +93377,7 @@ "name": "pcalg", "version": "2.7-11", "sha256": "14709561m2vz3y0qx1jwnxq0z464j9ddmvr8p765aclm97n87rvm", - "depends": ["abind", "bdsmatrix", "BH", "clue", "corpcor", "fastICA", "ggm", "graph", "igraph", "RBGL", "Rcpp", "RcppArmadillo", "robustbase", "sfsmisc", "vcd"] + "depends": ["BH", "RBGL", "Rcpp", "RcppArmadillo", "abind", "bdsmatrix", "clue", "corpcor", "fastICA", "ggm", "graph", "igraph", "robustbase", "sfsmisc", "vcd"] }, "pcalls": { "name": "pcalls", @@ -92429,7 +93401,7 @@ "name": "pccc", "version": "1.0.5", "sha256": "0jh8yadks76ip9jmgvld9nycdm74f5gllkyhfmnrir8vi6xwvbad", - "depends": ["dplyr", "Rcpp"] + "depends": ["Rcpp", "dplyr"] }, "pcdpca": { "name": "pcdpca", @@ -92441,13 +93413,13 @@ "name": "pcds", "version": "0.1.8", "sha256": "0cgi54lhgx0lc84nsj91qh8dy8a3f6r7zpkiqwwsx2vn4lm3lsp1", - "depends": ["combinat", "gMOIP", "interp", "plot3D", "plotrix", "Rdpack"] + "depends": ["Rdpack", "combinat", "gMOIP", "interp", "plot3D", "plotrix"] }, "pcds_ugraph": { "name": "pcds.ugraph", "version": "0.1.1", "sha256": "1mfqrc25ppqa88yqymrzlncpw8rviqgsrq50isa2v79hncijlj5v", - "depends": ["interp", "pcds", "Rdpack"] + "depends": ["Rdpack", "interp", "pcds"] }, "pcensmix": { "name": "pcensmix", @@ -92459,7 +93431,7 @@ "name": "pcev", "version": "2.2.2", "sha256": "1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw", - "depends": ["corpcor", "RMTstat"] + "depends": ["RMTstat", "corpcor"] }, "pcg": { "name": "pcg", @@ -92471,7 +93443,7 @@ "name": "pcgen", "version": "0.2.0", "sha256": "1v2fmxbj9gz5sg0hizw03ad8cfm9v25708h7fvnf6gb42b2mmyb3", - "depends": ["ggm", "graph", "Hmisc", "lme4", "MASS", "Matrix", "pcalg", "sommer"] + "depends": ["Hmisc", "MASS", "Matrix", "ggm", "graph", "lme4", "pcalg", "sommer"] }, "pch": { "name": "pch", @@ -92483,7 +93455,7 @@ "name": "pchc", "version": "1.2", "sha256": "0h1b1n9mw22wsh51nciphgyqk2cp98qkm4wskxw4ryj6lyqjk4k2", - "depends": ["bigstatsr", "bnlearn", "dcov", "doParallel", "foreach", "Rfast", "Rfast2", "robustbase"] + "depends": ["Rfast", "Rfast2", "bigstatsr", "bnlearn", "dcov", "doParallel", "foreach", "robustbase"] }, "pci": { "name": "pci", @@ -92525,7 +93497,7 @@ "name": "pcsstools", "version": "0.1.2", "sha256": "0pqc6qpl95dxphi77wcgi0v22a1q455iqaplsrvg32cf0mn3gikg", - "depends": ["gtools", "Rdpack"] + "depends": ["Rdpack", "gtools"] }, "pct": { "name": "pct", @@ -92537,19 +93509,19 @@ "name": "pctax", "version": "0.1.1", "sha256": "153vbgs3fw3x5n20wn58r3958kqrzcx0y15z5xjyc0lzhc66bzfs", - "depends": ["ade4", "dplyr", "ggnewscale", "ggplot2", "ggpubr", "ggrepel", "magrittr", "pcutils", "RColorBrewer", "reshape2", "scales", "tibble", "vegan"] + "depends": ["RColorBrewer", "ade4", "dplyr", "ggnewscale", "ggplot2", "ggpubr", "ggrepel", "magrittr", "pcutils", "reshape2", "scales", "tibble", "vegan"] }, "pcts": { "name": "pcts", "version": "0.15.7", "sha256": "1cr44w561sh05qpi0jyf2ypj4dadwyqkbaqn347v533bywasip2h", - "depends": ["BB", "gbutils", "lagged", "lubridate", "Matrix", "mcompanion", "PolynomF", "Rdpack", "sarima", "xts", "zoo"] + "depends": ["BB", "Matrix", "PolynomF", "Rdpack", "gbutils", "lagged", "lubridate", "mcompanion", "sarima", "xts", "zoo"] }, "pcutils": { "name": "pcutils", - "version": "0.2.5", - "sha256": "1fq8gzc63951q87akjqklvi4mqy29wywg0hknw7mn5zs9bim0zdd", - "depends": ["dplyr", "ggplot2", "magrittr", "RColorBrewer", "reshape2", "scales", "tibble", "tidyr"] + "version": "0.2.6", + "sha256": "1732qrr9f419a2g4wi7dnf97209k57qk9myb839sybdb3irvra9j", + "depends": ["RColorBrewer", "dplyr", "ggplot2", "magrittr", "reshape2", "scales", "tibble", "tidyr"] }, "pcv": { "name": "pcv", @@ -92559,21 +93531,21 @@ }, "pdR": { "name": "pdR", - "version": "1.9.2", - "sha256": "1g7qs1x4794rdkb0z25qxqyg3mgq8b4iq7fbiz51s6sjrmdwljk4", + "version": "1.9.3", + "sha256": "1rf7wpdswhn0m6nikzsj0xr0v1rdl4g96gkp59ikbvwjvzf58l7s", "depends": ["glmmTMB", "lme4", "pglm", "plm"] }, "pdSpecEst": { "name": "pdSpecEst", "version": "1.2.4", "sha256": "1sf2d7vh7a1qc0cq230an8pzg9qi9g640z0ql8x2pp9wfawfzn1f", - "depends": ["ddalpha", "multitaper", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "ddalpha", "multitaper"] }, "pda": { "name": "pda", "version": "1.2.7", "sha256": "0cdbjp6yrbqhkznsr282iyy76nzw9dz8z0gz48y12czjk9k6nvfd", - "depends": ["data_table", "glmnet", "httr", "jsonlite", "MASS", "metafor", "minqa", "numDeriv", "ordinal", "plyr", "Rcpp", "RcppArmadillo", "rvest", "survival"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "data_table", "glmnet", "httr", "jsonlite", "metafor", "minqa", "numDeriv", "ordinal", "plyr", "rvest", "survival"] }, "pdc": { "name": "pdc", @@ -92597,7 +93569,7 @@ "name": "pdfetch", "version": "0.2.9", "sha256": "03hx8h2sfahfy05wwrac048wzzlh1d1g6hbr0qzkkhk4xsv69qa1", - "depends": ["curl", "dplyr", "httr", "jsonlite", "lubridate", "magrittr", "readr", "stringr", "tidyr", "XML", "xml2", "xts", "zoo"] + "depends": ["XML", "curl", "dplyr", "httr", "jsonlite", "lubridate", "magrittr", "readr", "stringr", "tidyr", "xml2", "xts", "zoo"] }, "pdfminer": { "name": "pdfminer", @@ -92621,7 +93593,7 @@ "name": "pdftools", "version": "3.4.0", "sha256": "0r1c91qrva8lz0gs717llzs6zjiqjrdjhi71asf9bmx600hpp78b", - "depends": ["qpdf", "Rcpp"] + "depends": ["Rcpp", "qpdf"] }, "pdi": { "name": "pdi", @@ -92667,9 +93639,9 @@ }, "pdynmc": { "name": "pdynmc", - "version": "0.9.10", - "sha256": "1zz0q3s7cj3ypqz2hp3x2hy7d0m10130qdlk501l8w9z22f7raxq", - "depends": ["data_table", "MASS", "Matrix", "optimx", "Rdpack"] + "version": "0.9.11", + "sha256": "0lw0hnqp3czwrjwm7jbbqmkdp1rwwkfffrahs28ywbxpka0mzv1v", + "depends": ["MASS", "Matrix", "Rdpack", "data_table", "optimx"] }, "peRiodiCS": { "name": "peRiodiCS", @@ -92711,7 +93683,7 @@ "name": "pecora", "version": "0.1.1", "sha256": "0l66brd5d24hn279ck785jy4qnxiv9lc3d1czh4f3l25d0hj99xi", - "depends": ["matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "matrixStats"] }, "pedFamilias": { "name": "pedFamilias", @@ -92741,7 +93713,7 @@ "name": "pedbp", "version": "2.0.0", "sha256": "1cs03920am54c944ca8xif5k154zwzrvb8pa8kr0j03nxymkp7dm", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "scales"] }, "pedbuildr": { "name": "pedbuildr", @@ -92753,7 +93725,7 @@ "name": "pedgene", "version": "3.9", "sha256": "18b0galqql6pci0bfy8k93p29mqsk707wz4lr72plnciqg04l5sf", - "depends": ["CompQuadForm", "kinship2", "Matrix", "survey"] + "depends": ["CompQuadForm", "Matrix", "kinship2", "survey"] }, "pedigree": { "name": "pedigree", @@ -92771,13 +93743,7 @@ "name": "pedigreemm", "version": "0.3-4", "sha256": "1fy9fq5g94p7v2s0yih1kj4in5gqmip8dd96pls0k9ixbgcqj95v", - "depends": ["lme4", "Matrix"] - }, - "pedmod": { - "name": "pedmod", - "version": "0.2.4", - "sha256": "1xr98vp2s3s2cw4bjdw6156zas15jxvp9fbyz9rxd68i3zrblplx", - "depends": ["alabama", "BH", "psqn", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["Matrix", "lme4"] }, "pedmut": { "name": "pedmut", @@ -92789,7 +93755,7 @@ "name": "pedometrics", "version": "0.12.1", "sha256": "06s1iyv2nldqqkh1n3cgl3a7ribk17kyadgfx76lpgy016fi7vz5", - "depends": ["lattice", "latticeExtra", "Rcpp"] + "depends": ["Rcpp", "lattice", "latticeExtra"] }, "pedprobr": { "name": "pedprobr", @@ -92801,7 +93767,7 @@ "name": "pedquant", "version": "0.2.4", "sha256": "07b2jd3fryv3jdhp5wrsycnzfwhbx55dw34lxll60zn73m4ii24w", - "depends": ["curl", "data_table", "echarts4r", "httr", "jsonlite", "lubridate", "PerformanceAnalytics", "readr", "readxl", "rvest", "stringi", "TTR", "xefun", "zoo"] + "depends": ["PerformanceAnalytics", "TTR", "curl", "data_table", "echarts4r", "httr", "jsonlite", "lubridate", "readr", "readxl", "rvest", "stringi", "xefun", "zoo"] }, "pedsuite": { "name": "pedsuite", @@ -92811,8 +93777,8 @@ }, "pedtools": { "name": "pedtools", - "version": "2.6.0", - "sha256": "1df3dh0znwwp556krnfais7cs7970jzz8kgmmiiqz6c7g3acchrp", + "version": "2.7.0", + "sha256": "01zh9jks0qdry8yszfdb8rkmmp8035av3y4vxkybnaryymlnmaqy", "depends": ["kinship2", "pedmut"] }, "peermodels": { @@ -92837,7 +93803,7 @@ "name": "pema", "version": "0.1.3", "sha256": "0ymzq5s86z97sac1gq8qdh37p2aa39j4pz1n29ga3l0kmv5cxjky", - "depends": ["BH", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "shiny", "sn", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "rstan", "rstantools", "shiny", "sn"] }, "pempi": { "name": "pempi", @@ -92849,19 +93815,19 @@ "name": "pems.utils", "version": "0.2.29.1", "sha256": "0nmawl1l2wf77r02qpazqwm5708fk98k7l07wyybviwb1j3x1pqj", - "depends": ["baseline", "dplyr", "ggplot2", "lattice", "latticeExtra", "loa", "RColorBrewer", "Rcpp", "rlang"] + "depends": ["RColorBrewer", "Rcpp", "baseline", "dplyr", "ggplot2", "lattice", "latticeExtra", "loa", "rlang"] }, "pemultinom": { "name": "pemultinom", "version": "0.1.0", "sha256": "0xxcar0vmp6cc58471n5lnp5z5avrn3cv60mjdc96ifms0ghi3vl", - "depends": ["doParallel", "foreach", "magrittr", "nnet", "Rcpp"] + "depends": ["Rcpp", "doParallel", "foreach", "magrittr", "nnet"] }, "penAFT": { "name": "penAFT", "version": "0.3.0", "sha256": "1yhg9fr3fwpxxcp0ri4iqfwa9f2y134y5b13qfils4y15cp0rnzj", - "depends": ["ggplot2", "irlba", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "irlba"] }, "penMSM": { "name": "penMSM", @@ -92885,7 +93851,7 @@ "name": "penalizedSVM", "version": "1.1.4", "sha256": "1vafdczbqrwj9cagjd7la81jsrqkn917sxppxvz3i608yfl32igl", - "depends": ["corpcor", "e1071", "MASS", "mlegp", "statmod", "tgp"] + "depends": ["MASS", "corpcor", "e1071", "mlegp", "statmod", "tgp"] }, "penalizedcdf": { "name": "penalizedcdf", @@ -92909,13 +93875,13 @@ "name": "pencal", "version": "2.2.2", "sha256": "1wafrq4qgljycdmxhgc2jgbd2ayr9h4nbvss6l5dk2fxsq7yyv6x", - "depends": ["doParallel", "dplyr", "foreach", "glmnet", "lcmm", "magic", "MASS", "Matrix", "nlme", "purrr", "riskRegression", "survcomp", "survival", "survivalROC"] + "depends": ["MASS", "Matrix", "doParallel", "dplyr", "foreach", "glmnet", "lcmm", "magic", "nlme", "purrr", "riskRegression", "survcomp", "survival", "survivalROC"] }, "pencopulaCond": { "name": "pencopulaCond", "version": "0.2", "sha256": "18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511", - "depends": ["doParallel", "fda", "foreach", "igraph", "lattice", "latticeExtra", "pacotest", "quadprog", "TSP"] + "depends": ["TSP", "doParallel", "fda", "foreach", "igraph", "lattice", "latticeExtra", "pacotest", "quadprog"] }, "pendensity": { "name": "pendensity", @@ -92933,13 +93899,13 @@ "name": "penppml", "version": "0.2.3", "sha256": "1pxfnq5z7aygd2i3qcn2nvzvbw83gp4zhy3bavir3vpjd655llc3", - "depends": ["collapse", "devtools", "dplyr", "fixest", "glmnet", "magrittr", "matrixStats", "Rcpp", "RcppEigen", "rlang"] + "depends": ["Rcpp", "RcppEigen", "collapse", "devtools", "dplyr", "fixest", "glmnet", "magrittr", "matrixStats", "rlang"] }, "pense": { "name": "pense", - "version": "2.2.0", - "sha256": "1v077lmi7hs793yqv9m4ir0hd8s671714nj2gf3ya48qjmbizyg0", - "depends": ["lifecycle", "Matrix", "Rcpp", "RcppArmadillo", "rlang"] + "version": "2.2.2", + "sha256": "00z4safn8p0k7ib3jks60lz5cdbm5384cpf95p6js8a8an8p8lb6", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "lifecycle", "rlang"] }, "pensim": { "name": "pensim", @@ -92951,7 +93917,7 @@ "name": "pensynth", "version": "0.5.1", "sha256": "1ph3552y3jsm9kmv68bx15xn383djq2yhc34rpvazc8dyd3impkv", - "depends": ["clarabel", "Matrix"] + "depends": ["Matrix", "clarabel"] }, "peopleanalytics": { "name": "peopleanalytics", @@ -92987,19 +93953,19 @@ "name": "pepr", "version": "0.5.0", "sha256": "0q2pfsch6g3zhaj6cffg6rzmlrmzwpvny84nls6x5jjljhan4nzz", - "depends": ["data_table", "pryr", "RCurl", "stringr", "yaml"] + "depends": ["RCurl", "data_table", "pryr", "stringr", "yaml"] }, "peptoolkit": { "name": "peptoolkit", "version": "0.0.1", "sha256": "067x3v8m3ph2mqcglbd2h4y7xsslcvdr5iailiqxzfqg77mcqxx6", - "depends": ["caret", "dplyr", "Peptides", "stringr"] + "depends": ["Peptides", "caret", "dplyr", "stringr"] }, "perARMA": { "name": "perARMA", "version": "1.7", "sha256": "1d3gg5yb2gj3mfmk72lps40hkiaf65wv7zhhgxf918kqyqi5zhs2", - "depends": ["corpcor", "gnm", "matlab", "Matrix", "signal"] + "depends": ["Matrix", "corpcor", "gnm", "matlab", "signal"] }, "peramo": { "name": "peramo", @@ -93015,8 +93981,8 @@ }, "performance": { "name": "performance", - "version": "0.12.0", - "sha256": "0py6b1mix26z7fmarya7gfa9bwb8ymsr7z78ag8kld6ih3slga7z", + "version": "0.12.2", + "sha256": "0a20xnky7h6hgd6sk9n5jb4a2s201kr0cibhbii8i3jvnhz6cpmm", "depends": ["bayestestR", "datawizard", "insight"] }, "performanceEstimation": { @@ -93035,7 +94001,7 @@ "name": "periscope2", "version": "0.2.3", "sha256": "00zjap5l8aqyn6ykf3vmhsgiahkkgzkakjzc7z0wlm5ksv0cskdm", - "depends": ["bs4Dash", "DT", "fresh", "lifecycle", "lubridate", "shiny", "shinyFeedback", "shinyWidgets", "writexl", "yaml"] + "depends": ["DT", "bs4Dash", "fresh", "lifecycle", "lubridate", "shiny", "shinyFeedback", "shinyWidgets", "writexl", "yaml"] }, "perm": { "name": "perm", @@ -93069,27 +94035,27 @@ }, "perms": { "name": "perms", - "version": "1.13", - "sha256": "0zi7a8pai7j2i9ckfn87f2g5nm3r54631cib0lz0xdzczad2j2nr", - "depends": ["doParallel", "foreach", "MASS", "mclust", "Rdpack"] + "version": "1.14", + "sha256": "1qw6pqiw4jn5qgdr0i8h0m1jlaa218khbn8z3xdp82csx4y8ia1l", + "depends": ["Rdpack", "doParallel", "foreach"] }, "permubiome": { "name": "permubiome", "version": "1.3.2", "sha256": "102xmz27c97nc6wlllqq1k3nkvv28a0j7vx1msl0c7m6w2z6395b", - "depends": ["dabestr", "dplyr", "ggplot2", "gridExtra", "Matrix", "rlang"] + "depends": ["Matrix", "dabestr", "dplyr", "ggplot2", "gridExtra", "rlang"] }, "permuco": { "name": "permuco", "version": "1.1.2", "sha256": "0lh7n94hchq7wcp8j27c1m2v0xa5mq1dzpdvzkv2cwagy45v4383", - "depends": ["Matrix", "permute", "Rcpp"] + "depends": ["Matrix", "Rcpp", "permute"] }, "permutations": { "name": "permutations", - "version": "1.1-2", - "sha256": "0ilwf5d3cl6vv7dgdcdw4crlrxa6h5q4d3z17la71k3cz6ib3hvk", - "depends": ["freealg", "magic", "mathjaxr", "numbers", "partitions"] + "version": "1.1-5", + "sha256": "1cw6z9cw1pvkyf6c9v0rkfx3mr0bpncji4hsj1smxpq3y0pdwajx", + "depends": ["freealg", "magic", "numbers", "partitions"] }, "permute": { "name": "permute", @@ -93137,7 +94103,7 @@ "name": "personalized2part", "version": "0.0.1", "sha256": "104flqjyf0x0619msyc0vlkg61znvhf0v86fsdpksdxkgwb7wv7j", - "depends": ["foreach", "HDtweedie", "personalized", "Rcpp", "RcppEigen"] + "depends": ["HDtweedie", "Rcpp", "RcppEigen", "foreach", "personalized"] }, "personalr": { "name": "personalr", @@ -93191,13 +94157,13 @@ "name": "pestr", "version": "0.8.2", "sha256": "15w89cipky9di4csbp0cbw7s3qslr5mk94wivps77i3k0j9ys74g", - "depends": ["curl", "DBI", "dplyr", "httr", "jsonlite", "magrittr", "readr", "rlang", "RSQLite", "tidyr"] + "depends": ["DBI", "RSQLite", "curl", "dplyr", "httr", "jsonlite", "magrittr", "readr", "rlang", "tidyr"] }, "petersenlab": { "name": "petersenlab", "version": "1.0.0", "sha256": "1333k1kcy1ih9z09bl37zalsqrgf2xkqkqnsm28clc0r5np8df1d", - "depends": ["digest", "dplyr", "ggplot2", "Hmisc", "lavaan", "mitools", "mix", "mvtnorm", "nlme", "plyr", "psych", "RColorBrewer", "reshape2", "scales", "stringr", "tidyselect", "viridisLite", "xtable"] + "depends": ["Hmisc", "RColorBrewer", "digest", "dplyr", "ggplot2", "lavaan", "mitools", "mix", "mvtnorm", "nlme", "plyr", "psych", "reshape2", "scales", "stringr", "tidyselect", "viridisLite", "xtable"] }, "petitr": { "name": "petitr", @@ -93215,7 +94181,7 @@ "name": "pewdata", "version": "0.3.2", "sha256": "1a4ci8hzpmwxs48lsppswcwkxv72yn44w486m9izwvx8wr1nlh2d", - "depends": ["foreign", "magrittr", "purrr", "rio", "RSelenium", "stringr"] + "depends": ["RSelenium", "foreign", "magrittr", "purrr", "rio", "stringr"] }, "pexm": { "name": "pexm", @@ -93227,13 +94193,13 @@ "name": "pez", "version": "1.2-4", "sha256": "1z3lpbijivr32r9y0lh2yxsww7sz9kqmsvnril1gzn09d498xz3b", - "depends": ["ade4", "animation", "ape", "caper", "FD", "Matrix", "mvtnorm", "phytools", "picante", "quantreg", "vegan"] + "depends": ["FD", "Matrix", "ade4", "animation", "ape", "caper", "mvtnorm", "phytools", "picante", "quantreg", "vegan"] }, "pfa": { "name": "pfa", "version": "1.1", "sha256": "0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31", - "depends": ["lars", "POET", "quantreg"] + "depends": ["POET", "lars", "quantreg"] }, "pfica": { "name": "pfica", @@ -93257,13 +94223,13 @@ "name": "pgKDEsphere", "version": "1.0.1", "sha256": "01ck72mjzpkihkifsg2ca3xxivq7xq47483pl7dwy8xfjm2s0csd", - "depends": ["circular", "Directional", "DirStats", "matrixStats", "movMF", "Rcpp", "RcppArmadillo", "rgl", "rotasym"] + "depends": ["DirStats", "Directional", "Rcpp", "RcppArmadillo", "circular", "matrixStats", "movMF", "rgl", "rotasym"] }, "pgTools": { "name": "pgTools", "version": "1.0.2", "sha256": "1262q30ci6h10sk54s9wbadz6v22y4k6m32sclxw93kkvgvlkj6b", - "depends": ["data_table", "DBI", "odbc", "stringi", "toolbox"] + "depends": ["DBI", "data_table", "odbc", "stringi", "toolbox"] }, "pgam": { "name": "pgam", @@ -93281,7 +94247,7 @@ "name": "pgee.mixed", "version": "0.1.0", "sha256": "115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg", - "depends": ["copula", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "copula", "mvtnorm"] }, "pgenlibr": { "name": "pgenlibr", @@ -93317,13 +94283,13 @@ "name": "pgraph", "version": "1.6", "sha256": "1mfpyj4ahs5szkzzv5fs9g26651vcnign3mkfgp23g8nlrs50cqa", - "depends": ["energy", "glasso", "glmnet", "SAM"] + "depends": ["SAM", "energy", "glasso", "glmnet"] }, "pgsc": { "name": "pgsc", "version": "1.0.0", "sha256": "1y4szqn1jhp3yn8q738dpbhnqcqk45vgbmczamai154w3wb0qai7", - "depends": ["nloptr", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "nloptr", "reshape2"] }, "ph2bayes": { "name": "ph2bayes", @@ -93335,7 +94301,7 @@ "name": "ph2bye", "version": "0.1.4", "sha256": "0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67", - "depends": ["animation", "nleqslv", "Rcpp", "VGAM"] + "depends": ["Rcpp", "VGAM", "animation", "nleqslv"] }, "ph2mult": { "name": "ph2mult", @@ -93347,13 +94313,13 @@ "name": "phacking", "version": "0.2.1", "sha256": "0spx3aq35mpd6z87zfn4019jnazang45w3ly2p8kgxcp0wqj67h8", - "depends": ["BH", "dplyr", "ggplot2", "metabias", "metafor", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rlang", "rstan", "rstantools", "StanHeaders", "truncnorm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "dplyr", "ggplot2", "metabias", "metafor", "purrr", "rlang", "rstan", "rstantools", "truncnorm"] }, "phangorn": { "name": "phangorn", "version": "2.11.1", "sha256": "086lxqzqx1n3237h9q28r54libaz2xk9h3f6vfj8l49yw356w28h", - "depends": ["ape", "digest", "fastmatch", "generics", "igraph", "Matrix", "quadprog", "Rcpp"] + "depends": ["Matrix", "Rcpp", "ape", "digest", "fastmatch", "generics", "igraph", "quadprog"] }, "phantSEM": { "name": "phantSEM", @@ -93375,8 +94341,8 @@ }, "pharmaverseadam": { "name": "pharmaverseadam", - "version": "0.2.0", - "sha256": "18pmbvjy4v7182kriffp733snb84inqjii6gj1g0l5ahh24k7xim", + "version": "1.0.0", + "sha256": "1nwm0mbaaca5ry449h1llvv44wcy2lgd4bs3wfacb9ag2pfgglc8", "depends": [] }, "pharmaversesdtm": { @@ -93395,13 +94361,13 @@ "name": "phase", "version": "1.2.9", "sha256": "12v453jn99jzvicr5xipzkgb1yqmrkv9gbpw7ykl19kakw7qnqs3", - "depends": ["behavr", "circular", "lubridate", "plotly", "pracma", "shiny", "shinycssloaders", "shinydashboard", "shinyFiles", "shinythemes", "signal", "wesanderson", "zeitgebr", "zoo"] + "depends": ["behavr", "circular", "lubridate", "plotly", "pracma", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinythemes", "signal", "wesanderson", "zeitgebr", "zoo"] }, "phase1PRMD": { "name": "phase1PRMD", "version": "1.0.2", "sha256": "0gr73nsp0an0ci6l86h9fw6l791jdw0b1497qi58w25zypggdyac", - "depends": ["arrayhelpers", "coda", "dplyr", "ggplot2", "gridExtra", "kableExtra", "knitr", "MASS", "plyr", "RColorBrewer", "reshape2", "rjags"] + "depends": ["MASS", "RColorBrewer", "arrayhelpers", "coda", "dplyr", "ggplot2", "gridExtra", "kableExtra", "knitr", "plyr", "reshape2", "rjags"] }, "phase1RMD": { "name": "phase1RMD", @@ -93419,7 +94385,7 @@ "name": "phateR", "version": "1.0.7", "sha256": "16xb6fy0aa024054jwfbavjbzhwj6g4p6yrzy1lnzvpn8kb23hn5", - "depends": ["ggplot2", "Matrix", "memoise", "reticulate"] + "depends": ["Matrix", "ggplot2", "memoise", "reticulate"] }, "phd": { "name": "phd", @@ -93431,25 +94397,25 @@ "name": "phdcocktail", "version": "0.1.0", "sha256": "02gsyjqmafl5aw18lzd54ldfy521r9r9iwqlc44yqn70pi0i8rrs", - "depends": ["ggplot2", "here", "RColorBrewer", "rstudioapi", "scales"] + "depends": ["RColorBrewer", "ggplot2", "here", "rstudioapi", "scales"] }, "pheatmap": { "name": "pheatmap", "version": "1.0.12", "sha256": "1hdh74az3vyzz6dqa311rhxdm74n46lyr03p862kn80p0kp9d7ap", - "depends": ["gtable", "RColorBrewer", "scales"] + "depends": ["RColorBrewer", "gtable", "scales"] }, "pheble": { "name": "pheble", "version": "0.1.0", "sha256": "14q66ldpksxsh5q7mpgp4d9p43kbx1v4yqd35p3gqi6qxrlb5q1z", - "depends": ["adabag", "C50", "caret", "caTools", "data_table", "doParallel", "dplyr", "e1071", "earth", "evtree", "frbs", "glmnet", "gmodels", "hda", "HDclassif", "ipred", "kernlab", "kknn", "klaR", "magrittr", "MASS", "Matrix", "mda", "MLmetrics", "nnet", "party", "pls", "randomForest", "rpartScore", "sparseLDA", "themis"] + "depends": ["C50", "HDclassif", "MASS", "MLmetrics", "Matrix", "adabag", "caTools", "caret", "data_table", "doParallel", "dplyr", "e1071", "earth", "evtree", "frbs", "glmnet", "gmodels", "hda", "ipred", "kernlab", "kknn", "klaR", "magrittr", "mda", "nnet", "party", "pls", "randomForest", "rpartScore", "sparseLDA", "themis"] }, "phecodemap": { "name": "phecodemap", "version": "0.1.0", "sha256": "12dhyzazdsf938zp7i4ckbh2h5fvxg209mb4mq319akp34746h50", - "depends": ["collapsibleTree", "config", "dplyr", "DT", "golem", "plotly", "purrr", "readr", "rintrojs", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinydashboardPlus"] + "depends": ["DT", "collapsibleTree", "config", "dplyr", "golem", "plotly", "purrr", "readr", "rintrojs", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinydashboardPlus"] }, "phenModel": { "name": "phenModel", @@ -93473,13 +94439,13 @@ "name": "phenmod", "version": "1.2-7", "sha256": "1gxag58gbm3xmy9w0qx7j70bgdy8bwwjh2xz1iffbghvshximi1s", - "depends": ["gstat", "lattice", "pheno", "RColorBrewer"] + "depends": ["RColorBrewer", "gstat", "lattice", "pheno"] }, "pheno": { "name": "pheno", "version": "1.7-0", "sha256": "1hg2gqz3ibawn5ah1hffgfp15cis75nwd04jha09mjpkn1w8h9lg", - "depends": ["nlme", "quantreg", "SparseM"] + "depends": ["SparseM", "nlme", "quantreg"] }, "phenoCDM": { "name": "phenoCDM", @@ -93491,13 +94457,13 @@ "name": "phenocamr", "version": "1.1.5", "sha256": "1w9lzlmp4q2x12qhp4xmschcd79razy5fybq94381l7dshrwvzln", - "depends": ["changepoint", "daymetr", "httr", "jsonlite", "memoise", "MODISTools", "zoo"] + "depends": ["MODISTools", "changepoint", "daymetr", "httr", "jsonlite", "memoise", "zoo"] }, "phenofit": { "name": "phenofit", "version": "0.3.9", "sha256": "1b6laz7idd4cbliidv0xqz0k1h5f2f0v9lz82qhsy7p7pm9zagi6", - "depends": ["data_table", "dplyr", "ggplot2", "gridExtra", "lubridate", "magrittr", "numDeriv", "optimx", "purrr", "Rcpp", "RcppArmadillo", "stringr", "ucminf", "zeallot", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "dplyr", "ggplot2", "gridExtra", "lubridate", "magrittr", "numDeriv", "optimx", "purrr", "stringr", "ucminf", "zeallot", "zoo"] }, "phenolocrop": { "name": "phenolocrop", @@ -93539,30 +94505,30 @@ "name": "phia", "version": "0.3-1", "sha256": "1lsprm49njwp0gfn4knvwdq7d5lpq4irhysl8f26glcz9x929sff", - "depends": ["car", "Matrix"] + "depends": ["Matrix", "car"] }, "philentropy": { "name": "philentropy", "version": "0.8.0", "sha256": "0gmycszk86mc9clmxfdrspqh5z0g3cw2cgzaaqngxx38h68x99is", - "depends": ["KernSmooth", "poorman", "Rcpp"] + "depends": ["KernSmooth", "Rcpp", "poorman"] }, "phm": { "name": "phm", "version": "1.1.2", "sha256": "05ymrynv5zzrbj3vsdrijay841hv5jbkn8c0v4l6dqndysl9xis4", - "depends": ["data_table", "Matrix", "NLP", "shiny", "smallstuff", "tm"] + "depends": ["Matrix", "NLP", "data_table", "shiny", "smallstuff", "tm"] }, "phoenics": { "name": "phoenics", - "version": "0.1", - "sha256": "06312f3awzpgfhzl4ahla37hkw0nqyw8zb5yv7m25i53x0afxwr5", - "depends": ["blme", "factoextra", "FactoMineR", "lme4", "tibble", "tidyr"] + "version": "0.3", + "sha256": "1a7dws11pf2bpgkvchddr14v6zvbn16xwqrdmmz9plw9lindc00j", + "depends": ["FactoMineR", "blme", "factoextra", "lme4", "tibble", "tidyr"] }, "phoenix": { "name": "phoenix", - "version": "1.1.0", - "sha256": "1yhjbj1wgjlywa965d89pzk9c8gm3bjaapmi2dpdf7nzj9114n9r", + "version": "1.1.1", + "sha256": "0vb1y6ga3gjgm7xhaa2pv61cc4a8i45bdf1pvk2ym4l6c717s3yp", "depends": [] }, "phonR": { @@ -93585,15 +94551,15 @@ }, "phonfieldwork": { "name": "phonfieldwork", - "version": "0.0.14", - "sha256": "130gcpcblniasnqjjp085225ccq98wyqhcknxcn0iqs4v6m59dyc", + "version": "0.0.17", + "sha256": "0ysxa6zxd8mb798bm6vsdhnnnl2y2vyhfi4kbv64qsgjbyjqjkvh", "depends": ["mime", "phonTools", "readr", "rmarkdown", "tuneR", "xml2"] }, "phonics": { "name": "phonics", "version": "1.3.10", "sha256": "1g4gmfz190xaj800gawl79fzhmgimssa31kqzw8a70scp5psz3fw", - "depends": ["BH", "data_table", "Rcpp"] + "depends": ["BH", "Rcpp", "data_table"] }, "phosphoricons": { "name": "phosphoricons", @@ -93669,8 +94635,8 @@ }, "phreeqc": { "name": "phreeqc", - "version": "3.7.6", - "sha256": "086c8lpg6sq57j4q1nazl9gx51mfc5yz22yrw9qz115v8hbmq7w3", + "version": "3.8.0", + "sha256": "0ywhxqc33ybwlch2ym6wgm5s4dillhwg3ccdiz9iklv0i85grmd8", "depends": [] }, "phsmethods": { @@ -93713,13 +94679,13 @@ "name": "phyloTop", "version": "2.1.2", "sha256": "1f7sr0qp5i0kj1j2xr7fwpkjnpfnpdjy51dx33yz2q8jmn2axxdf", - "depends": ["ape", "igraph", "NHPoisson", "phylobase"] + "depends": ["NHPoisson", "ape", "igraph", "phylobase"] }, "phylobase": { "name": "phylobase", "version": "0.8.12", "sha256": "084gfzq51acmvzbsfpkqv3kgghdbncnwr008f95yf5b2vihcm0cv", - "depends": ["ade4", "ape", "Rcpp", "rncl", "RNeXML"] + "depends": ["RNeXML", "Rcpp", "ade4", "ape", "rncl"] }, "phylocanvas": { "name": "phylocanvas", @@ -93757,6 +94723,12 @@ "sha256": "1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il", "depends": ["mvtnorm"] }, + "phylopairs": { + "name": "phylopairs", + "version": "0.1.0", + "sha256": "0rspl6py8zjx5cs4q3cba1f7lvfvry4c06m5ng2ckwggjwpjcnam", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ape", "loo", "phytools", "rstan", "rstantools"] + }, "phylopath": { "name": "phylopath", "version": "1.3.0", @@ -93767,13 +94739,13 @@ "name": "phyloraster", "version": "2.1.0", "sha256": "0xildxiv8k2hrxdp0zkf939zbag62griq1ksalq0vfb32sb5l106", - "depends": ["ape", "SESraster", "terra"] + "depends": ["SESraster", "ape", "terra"] }, "phyloregion": { "name": "phyloregion", "version": "1.0.8", "sha256": "10i5s3dv71nr0m3wmph2rynzg9zj8xqzb6a25r5kj66r8v91jz3d", - "depends": ["ape", "betapart", "clustMixType", "colorspace", "igraph", "maptpx", "Matrix", "phangorn", "predicts", "smoothr", "terra", "vegan"] + "depends": ["Matrix", "ape", "betapart", "clustMixType", "colorspace", "igraph", "maptpx", "phangorn", "predicts", "smoothr", "terra", "vegan"] }, "phylosamp": { "name": "phylosamp", @@ -93785,7 +94757,7 @@ "name": "phylosem", "version": "1.1.4", "sha256": "0x93v0316xd79ab0pdc0w4pb4ljds89ihpp7a61kfdla7v2548bj", - "depends": ["ape", "phylobase", "phylopath", "RcppEigen", "sem", "TMB"] + "depends": ["RcppEigen", "TMB", "ape", "phylobase", "phylopath", "sem"] }, "phyloseqGraphTest": { "name": "phyloseqGraphTest", @@ -93797,7 +94769,7 @@ "name": "phylosignal", "version": "1.3.1", "sha256": "13gahqnxvqzvyr4x1aq3cq08832ljizsa5c71hf44175dfmdz5cd", - "depends": ["adephylo", "ape", "boot", "DBI", "igraph", "phylobase", "Rcpp", "RcppArmadillo"] + "depends": ["DBI", "Rcpp", "RcppArmadillo", "adephylo", "ape", "boot", "igraph", "phylobase"] }, "phylotate": { "name": "phylotate", @@ -93815,13 +94787,13 @@ "name": "phylter", "version": "0.9.11", "sha256": "1dkm6wfrmbbx7ygfbvk68mv4ay3986wzy0wadxskbbvbvqcshjqa", - "depends": ["ape", "ggplot2", "Rcpp", "RcppArmadillo", "RcppEigen", "reshape2", "Rfast", "RSpectra"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "RcppEigen", "Rfast", "ape", "ggplot2", "reshape2"] }, "phyr": { "name": "phyr", "version": "1.1.0", "sha256": "0jvjxvxx2nz9ra9vp00bmm3dxr2am4zs8cvxij8w4jjyskznxc96", - "depends": ["ape", "dplyr", "gridExtra", "latticeExtra", "lme4", "Matrix", "mvtnorm", "nloptr", "Rcpp", "RcppArmadillo", "tidyr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ape", "dplyr", "gridExtra", "latticeExtra", "lme4", "mvtnorm", "nloptr", "tidyr"] }, "phyreg": { "name": "phyreg", @@ -93839,19 +94811,19 @@ "name": "phytoclass", "version": "1.2.0", "sha256": "12b1xmzwcp90km4irjsrnks44b1rd82p8yn9cn4m6hsaiq6mb45c", - "depends": ["bestNormalize", "dplyr", "dynamicTreeCut", "ggplot2", "Metrics", "RcppML", "tidyr"] + "depends": ["Metrics", "RcppML", "bestNormalize", "dplyr", "dynamicTreeCut", "ggplot2", "tidyr"] }, "phytools": { "name": "phytools", "version": "2.3-0", "sha256": "10fh8svaxdk7s9abbzih9pj6carmv4r6fzbxlfafygxyjnk20c4p", - "depends": ["ape", "clusterGeneration", "coda", "combinat", "DEoptim", "doParallel", "expm", "foreach", "maps", "MASS", "mnormt", "nlme", "numDeriv", "optimParallel", "phangorn", "scatterplot3d"] + "depends": ["DEoptim", "MASS", "ape", "clusterGeneration", "coda", "combinat", "doParallel", "expm", "foreach", "maps", "mnormt", "nlme", "numDeriv", "optimParallel", "phangorn", "scatterplot3d"] }, "piar": { "name": "piar", "version": "0.7.0", "sha256": "04m2xcym1pm0v6riz18mdfjzhgw9hpi67djym2a15970av15ld9l", - "depends": ["gpindex", "Matrix"] + "depends": ["Matrix", "gpindex"] }, "picClip": { "name": "picClip", @@ -93895,17 +94867,23 @@ "sha256": "15zk36cpip49286djl45qqdfbj4w3yc6if1vk4bqphrascrg2val", "depends": ["cli", "glue", "rlang", "stringi", "stringr"] }, + "piecenorms": { + "name": "piecenorms", + "version": "1.1.0", + "sha256": "0cxr26j7gda9c8zqw4rcnhbm8740gfrq9fi7p24bg4z4cp78fl5n", + "depends": ["COINr", "R6", "classInt", "dplyr", "rlang", "scales", "univariateML", "vdiffr"] + }, "piecepackr": { "name": "piecepackr", - "version": "1.13.10", - "sha256": "1pplmwgi0wyp4qx6arlh96qiqxhlwb77g57bx70r10p99pfmjhyn", - "depends": ["gridGeometry", "grImport2", "jpeg", "png", "purrr", "R6", "rlang", "stringr", "tibble"] + "version": "1.13.11", + "sha256": "12xcl0p85dxa1zr5ps4aa3jqqlf2hnwyghj8g00f5km7534irxcs", + "depends": ["R6", "grImport2", "gridGeometry", "jpeg", "png", "purrr", "rlang", "stringr", "tibble"] }, "piecewiseSEM": { "name": "piecewiseSEM", "version": "2.3.0.1", "sha256": "0cgzvfcc0pwz4qvdmx7xj5wl8cki2ss0kjmlqz2kmxklfiz3y5c0", - "depends": ["car", "DiagrammeR", "emmeans", "igraph", "lme4", "MASS", "multcomp", "MuMIn", "nlme", "performance"] + "depends": ["DiagrammeR", "MASS", "MuMIn", "car", "emmeans", "igraph", "lme4", "multcomp", "nlme", "performance"] }, "piggyback": { "name": "piggyback", @@ -93929,7 +94907,7 @@ "name": "pimeta", "version": "1.1.3", "sha256": "1mx0m438db4n041bns6sm8sr8vrj6w8b2kvpmrkkp0bly2vpv40q", - "depends": ["ggplot2", "Rcpp", "RcppEigen", "scales"] + "depends": ["Rcpp", "RcppEigen", "ggplot2", "scales"] }, "pinfsc50": { "name": "pinfsc50", @@ -94049,7 +95027,7 @@ "name": "pivmet", "version": "0.6.0", "sha256": "0cz8grr03w29dnlhmf5r8yjcklhw6qz8rdf8ng1hdqcbp3ysplhk", - "depends": ["bayesmix", "bayesplot", "cluster", "corpcor", "MASS", "mclust", "mvtnorm", "rjags", "rstan", "runjags", "scales"] + "depends": ["MASS", "bayesmix", "bayesplot", "cluster", "corpcor", "mclust", "mvtnorm", "rjags", "rstan", "runjags", "scales"] }, "pivotaltrackR": { "name": "pivotaltrackR", @@ -94059,15 +95037,15 @@ }, "pivotea": { "name": "pivotea", - "version": "1.0.1", - "sha256": "1lrxpvas2m3p25x8j9mjbvpnsz984i847knibfjpmhkwyd3ik86z", - "depends": ["dplyr", "magrittr", "purrr", "rlang", "tidyr"] + "version": "1.0.2", + "sha256": "104xpmanp0l3fw2hnay6xpbzgcjfpqzbjp5mz6imyzwv5199fw4m", + "depends": ["dplyr", "purrr", "rlang", "tidyr"] }, "pivottabler": { "name": "pivottabler", "version": "1.5.5", "sha256": "1kf9z2ashfvgjl0sviryx2r9b9k1k9j9b9nzivr1nxm0d9x9n3yn", - "depends": ["data_table", "dplyr", "htmltools", "htmlwidgets", "R6"] + "depends": ["R6", "data_table", "dplyr", "htmltools", "htmlwidgets"] }, "piwikproR": { "name": "piwikproR", @@ -94139,13 +95117,13 @@ "name": "pkgbuild", "version": "1.4.4", "sha256": "1a72s2gg7ddjj94naiii44f3vyhky05gaa6xvdf72m1nshy88wjr", - "depends": ["callr", "cli", "desc", "processx", "R6"] + "depends": ["R6", "callr", "cli", "desc", "processx"] }, "pkgcache": { "name": "pkgcache", "version": "2.2.2", "sha256": "1qsvgdhinrz2mb4fr33pp6rm23pra6bgwzc70kjyl983zk2nrgby", - "depends": ["callr", "cli", "curl", "filelock", "jsonlite", "processx", "R6"] + "depends": ["R6", "callr", "cli", "curl", "filelock", "jsonlite", "processx"] }, "pkgcond": { "name": "pkgcond", @@ -94169,13 +95147,13 @@ "name": "pkgdepends", "version": "0.7.2", "sha256": "09nddbcz0z5lh6aaspjvfvbp74na7693a5w3hq36p4ah2b824zmi", - "depends": ["callr", "cli", "curl", "desc", "filelock", "jsonlite", "lpSolve", "pkgbuild", "pkgcache", "processx", "ps", "R6", "zip"] + "depends": ["R6", "callr", "cli", "curl", "desc", "filelock", "jsonlite", "lpSolve", "pkgbuild", "pkgcache", "processx", "ps", "zip"] }, "pkgdown": { "name": "pkgdown", - "version": "2.0.9", - "sha256": "186xzilh4079a6xjig3j4pdn99ipg4d5s5q1k75qclivq0b24m3f", - "depends": ["bslib", "callr", "cli", "desc", "digest", "downlit", "fs", "httr", "jsonlite", "magrittr", "memoise", "purrr", "ragg", "rlang", "rmarkdown", "tibble", "whisker", "withr", "xml2", "yaml"] + "version": "2.1.0", + "sha256": "1d4z4wv18yn00cj9wb4pizjjyvy4hqfc0mqynw6ycrldfcxxzlf4", + "depends": ["bslib", "callr", "cli", "desc", "digest", "downlit", "fontawesome", "fs", "httr2", "jsonlite", "openssl", "purrr", "ragg", "rlang", "rmarkdown", "tibble", "whisker", "withr", "xml2", "yaml"] }, "pkgfilecache": { "name": "pkgfilecache", @@ -94187,7 +95165,7 @@ "name": "pkggraph", "version": "0.2.3", "sha256": "1isiywgm20rypc5qr03p0k7lis76zzd96x5ncbvia644d2n13brm", - "depends": ["curl", "data_table", "dplyr", "ggnetwork", "ggplot2", "htmltools", "igraph", "intergraph", "Matrix", "network", "networkD3", "plyr", "RColorBrewer", "tibble"] + "depends": ["Matrix", "RColorBrewer", "curl", "data_table", "dplyr", "ggnetwork", "ggplot2", "htmltools", "igraph", "intergraph", "network", "networkD3", "plyr", "tibble"] }, "pkglite": { "name": "pkglite", @@ -94197,9 +95175,9 @@ }, "pkgload": { "name": "pkgload", - "version": "1.3.4", - "sha256": "1ki6k7l7dpb6bncvvcndrv5764jb1adrzs5iaxicakfsija4pc30", - "depends": ["cli", "crayon", "desc", "fs", "glue", "pkgbuild", "rlang", "rprojroot", "withr"] + "version": "1.4.0", + "sha256": "0jbmlvii40q6ymdhislmgby6dpf9585xl9d5cf8g4nn2kig8ir09", + "depends": ["cli", "desc", "fs", "glue", "lifecycle", "pkgbuild", "processx", "rlang", "rprojroot", "withr"] }, "pkgmaker": { "name": "pkgmaker", @@ -94211,13 +95189,13 @@ "name": "pkgndep", "version": "1.99.3", "sha256": "1llpizr2wkhfgygr9fd79qxym0xcrxfvz8w5n0kwvkvlq3iqid44", - "depends": ["BiocManager", "BiocVersion", "brew", "ComplexHeatmap", "GetoptLong", "GlobalOptions", "hash"] + "depends": ["BiocManager", "BiocVersion", "ComplexHeatmap", "GetoptLong", "GlobalOptions", "brew", "hash"] }, "pkgnet": { "name": "pkgnet", "version": "0.5.0", "sha256": "10sjvd3mwwlbj71zmdmczyrx5s95zax0w7m07nr6413c96ahny14", - "depends": ["assertthat", "covr", "data_table", "DT", "futile_logger", "glue", "igraph", "knitr", "magrittr", "R6", "rlang", "rmarkdown", "visNetwork"] + "depends": ["DT", "R6", "assertthat", "covr", "data_table", "futile_logger", "glue", "igraph", "knitr", "magrittr", "rlang", "rmarkdown", "visNetwork"] }, "pkgnews": { "name": "pkgnews", @@ -94295,13 +95273,13 @@ "name": "planningML", "version": "1.0.1", "sha256": "1s9lf43kkiciqkrcyq9icxdqfs8a1za60pwpbxnrdsa7gzf76i29", - "depends": ["caret", "dplyr", "glmnet", "lubridate", "Matrix", "MESS", "pROC"] + "depends": ["MESS", "Matrix", "caret", "dplyr", "glmnet", "lubridate", "pROC"] }, "planr": { "name": "planr", "version": "0.4.1", "sha256": "0qk8m235qja26g02rkg4sla6998mswqsy3hjwq39zdsmh88zy6bi", - "depends": ["dplyr", "lubridate", "magrittr", "RcppRoll", "tidyr"] + "depends": ["RcppRoll", "dplyr", "lubridate", "magrittr", "tidyr"] }, "planscorer": { "name": "planscorer", @@ -94313,7 +95291,7 @@ "name": "plantTracker", "version": "1.1.0", "sha256": "0qn07pb84j110zrml24gwb27za4wdxn0a4yfhc0c1174fipl6az1", - "depends": ["igraph", "Matrix", "sf", "units"] + "depends": ["Matrix", "igraph", "sf", "units"] }, "plantecophys": { "name": "plantecophys", @@ -94343,13 +95321,13 @@ "name": "plasma", "version": "1.1.3", "sha256": "02ygj3sjjds6iyh1d2jz8ifqc4m31zslplsmf88c8q8l67ilvrhl", - "depends": ["beanplot", "oompaBase", "pls", "plsRcox", "Polychrome", "survival", "viridisLite"] + "depends": ["Polychrome", "beanplot", "oompaBase", "pls", "plsRcox", "survival", "viridisLite"] }, "plasso": { "name": "plasso", "version": "0.1.2", "sha256": "09pc210wb98xnhm9wxsqvf217gysj9c2piwwhzxdp3lxb3my533x", - "depends": ["doParallel", "foreach", "glmnet", "iterators", "Matrix"] + "depends": ["Matrix", "doParallel", "foreach", "glmnet", "iterators"] }, "plater": { "name": "plater", @@ -94361,7 +95339,7 @@ "name": "platetools", "version": "0.1.7", "sha256": "1y4ih36y8z32pqd3cjz2qwysg4c8d6lqdgdb0pixi4i3nxsxq85b", - "depends": ["ggplot2", "RColorBrewer"] + "depends": ["RColorBrewer", "ggplot2"] }, "platowork": { "name": "platowork", @@ -94415,7 +95393,7 @@ "name": "plfMA", "version": "2.0", "sha256": "14v3q4sv3inax3b1sp0i4scrz70ca9yphzikhx0z9dh2w5mggq0k", - "depends": ["gWidgets2", "gWidgets2tcltk", "limma", "RColorBrewer", "tkrplot"] + "depends": ["RColorBrewer", "gWidgets2", "gWidgets2tcltk", "limma", "tkrplot"] }, "plfm": { "name": "plfm", @@ -94433,19 +95411,19 @@ "name": "plgraphics", "version": "1.2", "sha256": "04i79hrsqqygiq64n7bqzfvrhl1c3k2j3y58zzbqq79v9vshjy7p", - "depends": ["chron", "lme4", "MASS", "survival"] + "depends": ["MASS", "chron", "lme4", "survival"] }, "pliman": { "name": "pliman", "version": "2.1.0", "sha256": "0pgv7ayb78k481yd071hjvympikhdw6q8wqb9d5fazp9avmjlfz7", - "depends": ["doParallel", "foreach", "Rcpp", "RcppArmadillo", "sf", "stars", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "sf", "stars", "terra"] }, "plink": { "name": "plink", "version": "1.5-1", "sha256": "0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0", - "depends": ["lattice", "MASS", "statmod"] + "depends": ["MASS", "lattice", "statmod"] }, "plinkFile": { "name": "plinkFile", @@ -94457,13 +95435,13 @@ "name": "plinkQC", "version": "0.3.4", "sha256": "0l5gf7wf33fhzby0n2qzph02v7an2gj2dji1i129hxsxqnynx7dy", - "depends": ["cowplot", "data_table", "dplyr", "ggforce", "ggplot2", "ggrepel", "igraph", "optparse", "R_utils", "sys", "UpSetR"] + "depends": ["R_utils", "UpSetR", "cowplot", "data_table", "dplyr", "ggforce", "ggplot2", "ggrepel", "igraph", "optparse", "sys"] }, "plm": { "name": "plm", "version": "2.6-4", "sha256": "0xpd6r75g2mc9dsf8ckafbd3pjyrvlyrh12izj9yaqfw4v0vr9fx", - "depends": ["bdsmatrix", "collapse", "Formula", "lattice", "lmtest", "MASS", "maxLik", "nlme", "Rdpack", "sandwich", "zoo"] + "depends": ["Formula", "MASS", "Rdpack", "bdsmatrix", "collapse", "lattice", "lmtest", "maxLik", "nlme", "sandwich", "zoo"] }, "pln": { "name": "pln", @@ -94475,7 +95453,7 @@ "name": "plnr", "version": "2022.11.23", "sha256": "1qi24zpvclamxxfppgll7rcmq7fysxf8chk6wlkwkzmjl5c3cs4n", - "depends": ["data_table", "digest", "foreach", "fs", "glue", "purrr", "R6", "usethis", "uuid"] + "depends": ["R6", "data_table", "digest", "foreach", "fs", "glue", "purrr", "usethis", "uuid"] }, "plogr": { "name": "plogr", @@ -94553,7 +95531,7 @@ "name": "plotSEMM", "version": "2.4", "sha256": "0fircrayhz92zvkigkyb1zpn07bvssqs1ip15p926zj3rl77fqgy", - "depends": ["MplusAutomation", "plotrix", "plyr", "Rcpp", "shiny"] + "depends": ["MplusAutomation", "Rcpp", "plotrix", "plyr", "shiny"] }, "plotbb": { "name": "plotbb", @@ -94565,7 +95543,7 @@ "name": "plotcli", "version": "0.1.0", "sha256": "0qk78gagn5i6zs4srr3q2kzhi5vlyxhmxgwg2ah9c24asnfa3hyg", - "depends": ["crayon", "ggplot2", "knitr", "R6", "rlang", "rmarkdown", "stringr"] + "depends": ["R6", "crayon", "ggplot2", "knitr", "rlang", "rmarkdown", "stringr"] }, "plotdap": { "name": "plotdap", @@ -94589,13 +95567,13 @@ "name": "plotluck", "version": "1.1.1", "sha256": "16wqj4xfa8b7kal6v8mp2zlhwf9l3y6y5n44qbpvy652gzb2rw2z", - "depends": ["ggplot2", "hexbin", "Hmisc", "plyr", "quantreg", "RColorBrewer", "scales"] + "depends": ["Hmisc", "RColorBrewer", "ggplot2", "hexbin", "plyr", "quantreg", "scales"] }, "plotly": { "name": "plotly", "version": "4.10.4", "sha256": "0ryqcs9y7zan36zs6n1hxxy91pajldpax8q7cwcimlsmxnvrbafg", - "depends": ["base64enc", "crosstalk", "data_table", "digest", "dplyr", "ggplot2", "htmltools", "htmlwidgets", "httr", "jsonlite", "lazyeval", "magrittr", "promises", "purrr", "RColorBrewer", "rlang", "scales", "tibble", "tidyr", "vctrs", "viridisLite"] + "depends": ["RColorBrewer", "base64enc", "crosstalk", "data_table", "digest", "dplyr", "ggplot2", "htmltools", "htmlwidgets", "httr", "jsonlite", "lazyeval", "magrittr", "promises", "purrr", "rlang", "scales", "tibble", "tidyr", "vctrs", "viridisLite"] }, "plotlyGeoAssets": { "name": "plotlyGeoAssets", @@ -94615,6 +95593,12 @@ "sha256": "0ywv334n0f9x8iy0vxwcf0dkznd8wvwxw57vk0liyprjhn0ws5v9", "depends": ["Formula", "plotrix"] }, + "plotor": { + "name": "plotor", + "version": "0.4.1", + "sha256": "1cn1sa1m4afcszlxj5rq89i876d2pnmxinaiizc9hdzdmwciswjn", + "depends": ["broom", "dplyr", "ggplot2", "glue", "purrr", "scales", "tidyselect"] + }, "plotpc": { "name": "plotpc", "version": "1.0.4", @@ -94625,7 +95609,7 @@ "name": "plotprotein", "version": "1.0", "sha256": "14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks", - "depends": ["ade4", "plotrix", "plyr", "seqinr", "XML"] + "depends": ["XML", "ade4", "plotrix", "plyr", "seqinr"] }, "plotrix": { "name": "plotrix", @@ -94653,15 +95637,15 @@ }, "pls": { "name": "pls", - "version": "2.8-3", - "sha256": "1qvbwr567vxywpfsl7cb15lpwxpd04kf01nzk1v8dm4csf6p5sz6", + "version": "2.8-4", + "sha256": "0qnmndljjnk9amsrmx402dhpc742pm3cskqjxhdq2m4pcdiinnvq", "depends": [] }, "plsRbeta": { "name": "plsRbeta", "version": "0.3.0", "sha256": "0xikaxg1n298j8mm4vzzn7bfma1lmhak39aawfhp3ny3j1d8llr4", - "depends": ["betareg", "boot", "Formula", "MASS", "mvtnorm", "plsRglm"] + "depends": ["Formula", "MASS", "betareg", "boot", "mvtnorm", "plsRglm"] }, "plsRcox": { "name": "plsRcox", @@ -94673,13 +95657,13 @@ "name": "plsRglm", "version": "1.5.1", "sha256": "1xpf4rz4midrl62yn39bq4ax5yl8h18kcyv2ckxis888yv5b1bqr", - "depends": ["bipartite", "boot", "car", "MASS", "mvtnorm"] + "depends": ["MASS", "bipartite", "boot", "car", "mvtnorm"] }, "plsVarSel": { "name": "plsVarSel", "version": "0.9.12", "sha256": "0130hqnjwgm2l7sacxh5m98gm35qxgqwylbk42jnlp03azwqdbax", - "depends": ["bdsmatrix", "genalg", "MASS", "mvtnorm", "pls", "praznik", "progress"] + "depends": ["MASS", "bdsmatrix", "genalg", "mvtnorm", "pls", "praznik", "progress"] }, "plsdepot": { "name": "plsdepot", @@ -94697,13 +95681,13 @@ "name": "plsgenomics", "version": "1.5-3", "sha256": "0a1vzpbjd0lyj9vzx6fav4swiv89f3aj8i82g4yj0vd83vwakrnr", - "depends": ["boot", "fields", "MASS", "plyr", "reshape2", "RhpcBLASctl"] + "depends": ["MASS", "RhpcBLASctl", "boot", "fields", "plyr", "reshape2"] }, "plsmmLasso": { "name": "plsmmLasso", "version": "1.1.0", "sha256": "0xdpscm6villr4fby19jvg60y3mc81bcj6hwavrbmnbp02b4lhcj", - "depends": ["dplyr", "ggplot2", "glmnet", "hdi", "MASS", "mvtnorm", "rlang", "scalreg"] + "depends": ["MASS", "dplyr", "ggplot2", "glmnet", "hdi", "mvtnorm", "rlang", "scalreg"] }, "plsmod": { "name": "plsmod", @@ -94745,7 +95729,7 @@ "name": "plumber", "version": "1.2.2", "sha256": "1ycq3kjkrlx66h05g5ncvmq2cr051609xs4bzs8n49c70h6p0bpr", - "depends": ["crayon", "ellipsis", "httpuv", "jsonlite", "lifecycle", "magrittr", "mime", "promises", "R6", "rlang", "sodium", "stringi", "swagger", "webutils"] + "depends": ["R6", "crayon", "ellipsis", "httpuv", "jsonlite", "lifecycle", "magrittr", "mime", "promises", "rlang", "sodium", "stringi", "swagger", "webutils"] }, "plumberDeploy": { "name": "plumberDeploy", @@ -94769,7 +95753,7 @@ "name": "plume", "version": "0.2.4", "sha256": "00czlz71wwj77kxppxrfvsgi23g71h5r4xbdsadqjr8jidcplhch", - "depends": ["dplyr", "glue", "jsonlite", "knitr", "lifecycle", "purrr", "R6", "readr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs", "yaml"] + "depends": ["R6", "dplyr", "glue", "jsonlite", "knitr", "lifecycle", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs", "yaml"] }, "plusCode2": { "name": "plusCode2", @@ -94787,7 +95771,7 @@ "name": "plutor", "version": "0.1.0", "sha256": "09wwv47rigjl61q2c7bhq5qa2gghklzia5pqm4vwp66v3j7nb1pn", - "depends": ["baizer", "cli", "dplyr", "ggh4x", "ggplot2", "ggsci", "magrittr", "purrr", "RColorBrewer", "repr", "rlang", "scales", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "baizer", "cli", "dplyr", "ggh4x", "ggplot2", "ggsci", "magrittr", "purrr", "repr", "rlang", "scales", "stringr", "tibble", "tidyr"] }, "plyr": { "name": "plyr", @@ -94797,15 +95781,15 @@ }, "pm3": { "name": "pm3", - "version": "0.1.9", - "sha256": "03q36qmq9hvkws5v79c39z698fjgfpyfxz5nx7g8diy6sj834mw6", + "version": "0.2.0", + "sha256": "0mnhjvgra6a270ji1916siyn63qz9w1kmpqabsg3r68cjqbp0a0w", "depends": ["tableone"] }, "pmartR": { "name": "pmartR", "version": "2.4.5", "sha256": "07996a2xs3rwxaa8dw53pm07n2052lq223prqd4lbf8ijy3za765", - "depends": ["BH", "data_table", "doParallel", "dplyr", "e1071", "foreach", "ggplot2", "glmpca", "magrittr", "mvtnorm", "parallelly", "patchwork", "pcaMethods", "purrr", "RColorBrewer", "Rcpp", "RcppArmadillo", "rrcov", "stringr", "tidyr"] + "depends": ["BH", "RColorBrewer", "Rcpp", "RcppArmadillo", "data_table", "doParallel", "dplyr", "e1071", "foreach", "ggplot2", "glmpca", "magrittr", "mvtnorm", "parallelly", "patchwork", "pcaMethods", "purrr", "rrcov", "stringr", "tidyr"] }, "pmc": { "name": "pmc", @@ -94817,7 +95801,7 @@ "name": "pmcalibration", "version": "0.1.0", "sha256": "1zhg55jdf8jd92216waa2g18mvni8qh6j2idgf77k6mcwb63m9zw", - "depends": ["checkmate", "chk", "Hmisc", "MASS", "mgcv", "pbapply", "survival"] + "depends": ["Hmisc", "MASS", "checkmate", "chk", "mgcv", "pbapply", "survival"] }, "pmclust": { "name": "pmclust", @@ -94829,19 +95813,25 @@ "name": "pmd", "version": "0.2.1", "sha256": "14xra1d6qx6gxnpiwfsxz200qhmm7s4zy2j8h5kwbvbpnykdyr5c", - "depends": ["data_table", "enviGCMS", "igraph", "RColorBrewer"] + "depends": ["RColorBrewer", "data_table", "enviGCMS", "igraph"] }, "pmetar": { "name": "pmetar", "version": "0.5.0", "sha256": "14vz227mq1kjrmhb0gknx4alk0krl6aaj7rss3mm2hf832kr5724", - "depends": ["curl", "dplyr", "httr", "lubridate", "magrittr", "RCurl", "stringr", "tidyr"] + "depends": ["RCurl", "curl", "dplyr", "httr", "lubridate", "magrittr", "stringr", "tidyr"] + }, + "pmev": { + "name": "pmev", + "version": "0.0.2", + "sha256": "02qkajcmv46s1aapxmm59k7y8mcnjdcgvhirdzqmzj88li3sgm3f", + "depends": ["dplyr", "lubridate", "magrittr", "rlang", "zoo"] }, "pmhtutorial": { "name": "pmhtutorial", "version": "1.5", "sha256": "1hcw8hwpsivbhz86lnzy08q9n8vahnq8f7rmi4xkmg6b44582cqx", - "depends": ["mvtnorm", "Quandl"] + "depends": ["Quandl", "mvtnorm"] }, "pmlbr": { "name": "pmlbr", @@ -94859,7 +95849,7 @@ "name": "pmml", "version": "2.5.2", "sha256": "1faad5yqyh6dx40056w74vlyw4wxjgh41jv8b2vf2gh26laf22kk", - "depends": ["stringr", "XML"] + "depends": ["XML", "stringr"] }, "pmmlTransformations": { "name": "pmmlTransformations", @@ -94871,7 +95861,7 @@ "name": "pmparser", "version": "1.0.20", "sha256": "0csjvy730c0pd7b2rq732whv7wb3pahnrc1mvzh33ymlbhd6jng8", - "depends": ["curl", "data_table", "DBI", "foreach", "glue", "iterators", "jsonlite", "R_utils", "RCurl", "withr", "xml2"] + "depends": ["DBI", "RCurl", "R_utils", "curl", "data_table", "foreach", "glue", "iterators", "jsonlite", "withr", "xml2"] }, "pmr": { "name": "pmr", @@ -94901,13 +95891,13 @@ "name": "pmwg", "version": "0.2.7", "sha256": "17q2w48bgk7m4jp5567ig0gvvcz14rswf36q8561ykd0kyaxq2vj", - "depends": ["checkmate", "coda", "condMVNorm", "MASS", "mvtnorm"] + "depends": ["MASS", "checkmate", "coda", "condMVNorm", "mvtnorm"] }, "pmxTools": { "name": "pmxTools", "version": "1.3", "sha256": "1is56is0xg9syfwma90wqp7rxbgcv36qcpmcxnz0dlf7ypnvqsak", - "depends": ["chron", "data_tree", "dplyr", "ggdist", "gghalves", "ggplot2", "magrittr", "MASS", "patchwork", "PKNCA", "scales", "stringr", "tibble", "xml2"] + "depends": ["MASS", "PKNCA", "chron", "data_tree", "dplyr", "ggdist", "gghalves", "ggplot2", "magrittr", "patchwork", "scales", "stringr", "tibble", "xml2"] }, "pmxcode": { "name": "pmxcode", @@ -94979,13 +95969,13 @@ "name": "pointRes", "version": "2.0.2", "sha256": "1a3yj94rg16fbc47ahwdq17i8pganm6vg6xfl3b0glybw5f2hpkj", - "depends": ["DescTools", "dplR", "ggplot2", "plyr", "TripleR"] + "depends": ["DescTools", "TripleR", "dplR", "ggplot2", "plyr"] }, "pointblank": { "name": "pointblank", "version": "0.12.1", "sha256": "1wwb9ncji7450rbbmrh9mznl4pnpmxq8ibx785bz9dsswdglzfhq", - "depends": ["base64enc", "blastula", "cli", "DBI", "dbplyr", "digest", "dplyr", "fs", "glue", "gt", "htmltools", "knitr", "magrittr", "rlang", "scales", "testthat", "tibble", "tidyr", "tidyselect", "yaml"] + "depends": ["DBI", "base64enc", "blastula", "cli", "dbplyr", "digest", "dplyr", "fs", "glue", "gt", "htmltools", "knitr", "magrittr", "rlang", "scales", "testthat", "tibble", "tidyr", "tidyselect", "yaml"] }, "pointdensityP": { "name": "pointdensityP", @@ -95053,29 +96043,35 @@ "sha256": "11i1xxvj3ik8kjpm8q1ind3qkwrgyhv0sdcynwj4wld2n6i1v2v5", "depends": ["shiny"] }, + "poldis": { + "name": "poldis", + "version": "0.1.1", + "sha256": "02043wqc2ja12pybaid7c1a33s14q7dhj7mzca5z6i5ganqihrgr", + "depends": ["dplyr", "purrr", "quanteda", "spacyr", "stringdist", "stringi", "stringr", "textstem", "tidyr"] + }, "policytree": { "name": "policytree", "version": "1.2.3", "sha256": "1a0yqg754gb793k9zrhp2zb1j5lw1kv1ziv9dr7rk2zmzgs1k5pb", - "depends": ["BH", "grf", "Rcpp"] + "depends": ["BH", "Rcpp", "grf"] }, "polimetrics": { "name": "polimetrics", "version": "1.2.1.14", "sha256": "0zzqzcfmvb6a9lav5sdgzhx4637r068q3kyjqk1ykdjg2d7s7lrv", - "depends": ["car", "dplyr", "formula_tools", "ggplot2", "gplots", "MASS", "purrr", "rlang", "rstatix", "stringr", "tidyverse"] + "depends": ["MASS", "car", "dplyr", "formula_tools", "ggplot2", "gplots", "purrr", "rlang", "rstatix", "stringr", "tidyverse"] }, "poliscidata": { "name": "poliscidata", "version": "2.3.0", "sha256": "1ywfhksc6gcc2xk5lp6s8nn4wib92sv7p3wq92dzabf75q6mscix", - "depends": ["abind", "car", "descr", "gplots", "Hmisc", "plotrix", "plyr", "survey", "weights", "xtable"] + "depends": ["Hmisc", "abind", "car", "descr", "gplots", "plotrix", "plyr", "survey", "weights", "xtable"] }, "polished": { "name": "polished", "version": "0.8.1", "sha256": "0qn7zlxw7jr0apvn23a6x00xn5fbg2c2hg6713biwsi7iqhb0amc", - "depends": ["automagic", "desc", "digest", "dplyr", "DT", "htmltools", "httr", "jose", "jsonlite", "lubridate", "otp", "purrr", "rlang", "rmarkdown", "shiny", "shinycssloaders", "shinydashboard", "shinyFeedback", "shinyjs", "shinyWidgets", "stringr", "tibble", "tidyr", "uuid", "yaml"] + "depends": ["DT", "automagic", "desc", "digest", "dplyr", "htmltools", "httr", "jose", "jsonlite", "lubridate", "otp", "purrr", "rlang", "rmarkdown", "shiny", "shinyFeedback", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "stringr", "tibble", "tidyr", "uuid", "yaml"] }, "polite": { "name": "polite", @@ -95099,7 +96095,7 @@ "name": "polle", "version": "1.4", "sha256": "11n2g4gbwvcgw49pfr7qgbfidfwliqkag3n6wxcinl44b2l6jjfi", - "depends": ["data_table", "DynTxRegime", "future_apply", "lava", "policytree", "progressr", "SuperLearner", "survival", "targeted"] + "depends": ["DynTxRegime", "SuperLearner", "data_table", "future_apply", "lava", "policytree", "progressr", "survival", "targeted"] }, "pollen": { "name": "pollen", @@ -95123,7 +96119,7 @@ "name": "polmineR", "version": "0.8.9", "sha256": "0cxjy3w4k52kdjf66yysvd1yd96rv5xrzqjrkdvl4wrhxvla3202", - "depends": ["cli", "data_table", "DT", "fs", "jsonlite", "knitr", "lifecycle", "magrittr", "Matrix", "pbapply", "RcppCWB", "rlang", "slam", "stringi", "tm", "xml2"] + "depends": ["DT", "Matrix", "RcppCWB", "cli", "data_table", "fs", "jsonlite", "knitr", "lifecycle", "magrittr", "pbapply", "rlang", "slam", "stringi", "tm", "xml2"] }, "polspline": { "name": "polspline", @@ -95147,7 +96143,7 @@ "name": "polyRAD", "version": "2.0.0", "sha256": "12qlws0d6s94rand1a7azd7yv22qzij1aqmhrvw4az0y7jy2wka4", - "depends": ["fastmatch", "pcaMethods", "Rcpp", "stringi"] + "depends": ["Rcpp", "fastmatch", "pcaMethods", "stringi"] }, "polySegratio": { "name": "polySegratio", @@ -95175,27 +96171,27 @@ }, "polyclip": { "name": "polyclip", - "version": "1.10-6", - "sha256": "0qwb5w1ishbhg1nhdp8985ddvcs7ljdyrbv059hx576xmgni6brw", + "version": "1.10-7", + "sha256": "1lshalmhdaw0g0hzfy2qwid282pq3kwzy4jz1hf73xmjlp1sm3pm", "depends": [] }, "polycor": { "name": "polycor", "version": "0.8-1", "sha256": "0285rvx8238qp8dix0jq0cqq7ks8h6cjwsscbc7dx4n9nph56pzh", - "depends": ["admisc", "Matrix", "mvtnorm"] + "depends": ["Matrix", "admisc", "mvtnorm"] }, "polyglotr": { "name": "polyglotr", - "version": "1.5.0", - "sha256": "0v3ada7279i619gv5r92xnyhjgb3qyydq88b5w7mj58al1wni6cg", - "depends": ["dplyr", "httr", "jsonlite", "magrittr", "purrr", "RCurl", "rlang", "rvest", "stringr", "tibble", "urltools"] + "version": "1.5.1", + "sha256": "00h9v05sv6bqyp2wqa6dvxix9psa2i6csx4yig74i8iycl9issfb", + "depends": ["RCurl", "dplyr", "httr", "jsonlite", "magrittr", "purrr", "rlang", "rvest", "stringr", "tibble", "urltools"] }, "polyhedralCubature": { "name": "polyhedralCubature", "version": "1.1.0", "sha256": "1la8cj261c4vshr4yd3vgplzv1ykrkgvlwrjm49fgzh142rk59gc", - "depends": ["gmp", "magrittr", "Matrix", "ompr", "qspray", "rcdd", "SimplicialCubature", "spray", "tessellation"] + "depends": ["Matrix", "SimplicialCubature", "gmp", "magrittr", "ompr", "qspray", "rcdd", "spray", "tessellation"] }, "polylabelr": { "name": "polylabelr", @@ -95207,7 +96203,7 @@ "name": "polymapR", "version": "1.1.6", "sha256": "0aschby014m0j0nrr2q4pfghhakx89jq6wn8pv2dnbfpbg779l18", - "depends": ["doParallel", "foreach", "igraph", "knitr", "MDSMap"] + "depends": ["MDSMap", "doParallel", "foreach", "igraph", "knitr"] }, "polynom": { "name": "polynom", @@ -95231,7 +96227,7 @@ "name": "polyqtlR", "version": "0.1.1", "sha256": "0yz27785cfw50sw6nniiqmdggji502wh84zcvqf31wzznjryy9v5", - "depends": ["abind", "doParallel", "foreach", "Hmisc", "knitr", "nlme", "RColorBrewer", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Hmisc", "RColorBrewer", "Rcpp", "RcppArmadillo", "abind", "doParallel", "foreach", "knitr", "nlme", "reshape2"] }, "polyreg": { "name": "polyreg", @@ -95249,7 +96245,7 @@ "name": "polywog", "version": "0.4-1", "sha256": "02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n", - "depends": ["foreach", "Formula", "glmnet", "iterators", "Matrix", "miscTools", "ncvreg", "Rcpp", "stringr"] + "depends": ["Formula", "Matrix", "Rcpp", "foreach", "glmnet", "iterators", "miscTools", "ncvreg", "stringr"] }, "pomcheckr": { "name": "pomcheckr", @@ -95261,7 +96257,7 @@ "name": "pomdp", "version": "1.2.3", "sha256": "1l873a4p0fzfmgz52v57i2ccmpsrv10lvbrm7mr39qwqsaklh3bv", - "depends": ["foreach", "igraph", "Matrix", "pomdpSolve", "processx", "Rcpp"] + "depends": ["Matrix", "Rcpp", "foreach", "igraph", "pomdpSolve", "processx"] }, "pomdpSolve": { "name": "pomdpSolve", @@ -95277,8 +96273,8 @@ }, "pomp": { "name": "pomp", - "version": "5.9", - "sha256": "1hhsv06vcqfzzb42nk0sidp9gd1larqrr3s6f5qh7hf1jv1b0d86", + "version": "5.10", + "sha256": "0pz12apfh600nnbdcrm3p9xr47p3qlc9bp80ahkvixb17vkr9z30", "depends": ["coda", "data_table", "deSolve", "digest", "mvtnorm"] }, "pompom": { @@ -95291,7 +96287,7 @@ "name": "pompp", "version": "0.1.3", "sha256": "0svlzhsm1kfwgjpx2cas63jm8v5b9cxlksipv758vxlnc3jiarvk", - "depends": ["coda", "geoR", "Rcpp", "RcppEigen", "RcppProgress"] + "depends": ["Rcpp", "RcppEigen", "RcppProgress", "coda", "geoR"] }, "pooh": { "name": "pooh", @@ -95303,13 +96299,13 @@ "name": "pool", "version": "1.0.3", "sha256": "1v0w396cszpyi6p59bmvbbpzb8gk0qj0s5hq42jj9rf351lzjqf4", - "depends": ["DBI", "later", "R6", "rlang"] + "depends": ["DBI", "R6", "later", "rlang"] }, "poolABC": { "name": "poolABC", "version": "1.0.0", "sha256": "0l1sg9w1a385g6cz82b73a13661bx716ppvabvji7b6p99i9kv99", - "depends": ["doParallel", "foreach", "ggplot2", "locfit", "MetricsWeighted", "nnet", "poolHelper", "RColorBrewer", "rlang", "scrm"] + "depends": ["MetricsWeighted", "RColorBrewer", "doParallel", "foreach", "ggplot2", "locfit", "nnet", "poolHelper", "rlang", "scrm"] }, "poolHelper": { "name": "poolHelper", @@ -95327,7 +96323,7 @@ "name": "poolfstat", "version": "2.2.0", "sha256": "17wama4lxl7q2i9j2v15kn33i2lszrsyim9qj8dihhx9r6p9vdls", - "depends": ["ape", "data_table", "DiagrammeR", "doParallel", "foreach", "Matrix", "nnls", "progress", "Rcpp", "RcppProgress", "Ryacas", "zoo"] + "depends": ["DiagrammeR", "Matrix", "Rcpp", "RcppProgress", "Ryacas", "ape", "data_table", "doParallel", "foreach", "nnls", "progress", "zoo"] }, "pooling": { "name": "pooling", @@ -95351,7 +96347,7 @@ "name": "pop", "version": "0.1", "sha256": "0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj", - "depends": ["igraph", "MASS"] + "depends": ["MASS", "igraph"] }, "pop_lion": { "name": "pop.lion", @@ -95369,7 +96365,7 @@ "name": "popEpi", "version": "0.4.12", "sha256": "13fasp84hxxpbn6gmfjfl1kzija7y11mvlhc77rpqnj1l5wcm1rn", - "depends": ["data_table", "Epi", "survival"] + "depends": ["Epi", "data_table", "survival"] }, "popPCR": { "name": "popPCR", @@ -95405,7 +96401,7 @@ "name": "popdemo", "version": "1.3-1", "sha256": "0xvqp71spqh5khi2gdzxmj8pp71i6l2qpcgcw8s9xbqwx9w905mq", - "depends": ["expm", "MCMCpack"] + "depends": ["MCMCpack", "expm"] }, "popgenr": { "name": "popgenr", @@ -95417,7 +96413,7 @@ "name": "popkin", "version": "1.3.23", "sha256": "07wlja7c96az0d82c3b0m1kmc04sbgp73asbaks26jwvjw4vmby5", - "depends": ["ape", "RColorBrewer"] + "depends": ["RColorBrewer", "ape"] }, "poppr": { "name": "poppr", @@ -95429,7 +96425,7 @@ "name": "popstudy", "version": "1.0.1", "sha256": "09lavka4hr4f8m2j8wqvd4pqxbxhclac1p2f2vq15xk7n4xfbhw3", - "depends": ["correlation", "corrplot", "corrr", "demography", "DescTools", "dplyr", "forecast", "ggplot2", "ggpubr", "here", "Hmisc", "lubridate", "magrittr", "moments", "rainbow", "rcompanion", "Rdpack", "scales", "stringr", "tidyr"] + "depends": ["DescTools", "Hmisc", "Rdpack", "correlation", "corrplot", "corrr", "demography", "dplyr", "forecast", "ggplot2", "ggpubr", "here", "lubridate", "magrittr", "moments", "rainbow", "rcompanion", "scales", "stringr", "tidyr"] }, "poptrend": { "name": "poptrend", @@ -95441,7 +96437,7 @@ "name": "populR", "version": "0.2.1", "sha256": "1j0ip93pd5sq2rcqd0pw5c0nmi1pjjaxi5k4xk97kgwnqcq5ib7n", - "depends": ["dplyr", "Metrics", "osmdata", "rlang", "sf", "units", "usethis"] + "depends": ["Metrics", "dplyr", "osmdata", "rlang", "sf", "units", "usethis"] }, "population": { "name": "population", @@ -95465,7 +96461,7 @@ "name": "porridge", "version": "0.3.3", "sha256": "0zya6zv8rsmbwv330jmx2pz1cn97m359nb0a7cjiyjgbggygxryf", - "depends": ["MASS", "Matrix", "mvtnorm", "pracma", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "mvtnorm", "pracma"] }, "port4me": { "name": "port4me", @@ -95495,13 +96491,13 @@ "name": "portfolio.optimization", "version": "1.0-0", "sha256": "1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr", - "depends": ["magrittr", "MASS", "modopt_matlab", "xts"] + "depends": ["MASS", "magrittr", "modopt_matlab", "xts"] }, "portfolioBacktest": { "name": "portfolioBacktest", "version": "0.4.1", "sha256": "1qf7bbf3frivp0q55h3fj9ki2igaa6djpg3zv1x6hh53nl25dvbb", - "depends": ["digest", "evaluate", "ggplot2", "pbapply", "PerformanceAnalytics", "quadprog", "quantmod", "R_utils", "rlang", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "R_utils", "digest", "evaluate", "ggplot2", "pbapply", "quadprog", "quantmod", "rlang", "xts", "zoo"] }, "portion": { "name": "portion", @@ -95525,7 +96521,13 @@ "name": "portvine", "version": "1.0.3", "sha256": "0ikz7lcrj3sky9ybbnpnlzxqbv004d7rl5sqdx90gvx1lvbs8aaq", - "depends": ["BH", "checkmate", "data_table", "dplyr", "dtplyr", "future_apply", "kde1d", "ppcor", "Rcpp", "RcppEigen", "RcppThread", "rlang", "rugarch", "rvinecopulib", "tidyr", "wdm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppThread", "checkmate", "data_table", "dplyr", "dtplyr", "future_apply", "kde1d", "ppcor", "rlang", "rugarch", "rvinecopulib", "tidyr", "wdm"] + }, + "poset": { + "name": "poset", + "version": "1.0.0", + "sha256": "012abgxx4nazr7ls7iiwpvxcxwkcfc08iyggjbd0d2hdm29h4fq0", + "depends": [] }, "posologyr": { "name": "posologyr", @@ -95537,7 +96539,7 @@ "name": "postGGIR", "version": "2.4.0.2", "sha256": "1jxmvgzq4hv7sy2zcs8jicp0223mhv3mywhxbay2nv3bl0h4xfgs", - "depends": ["abind", "accelerometry", "ActCR", "ActFrag", "cosinor", "cosinor2", "denseFLMM", "dplyr", "GGIR", "ineq", "kableExtra", "minpack_lm", "refund", "survival", "tidyr", "xlsx", "zoo"] + "depends": ["ActCR", "ActFrag", "GGIR", "abind", "accelerometry", "cosinor", "cosinor2", "denseFLMM", "dplyr", "ineq", "kableExtra", "minpack_lm", "refund", "survival", "tidyr", "xlsx", "zoo"] }, "postHoc": { "name": "postHoc", @@ -95565,8 +96567,8 @@ }, "posterior": { "name": "posterior", - "version": "1.5.0", - "sha256": "1pp233ddrs116w1rmp3khhmibjf6l021b1x79k6z48g3r9zk042a", + "version": "1.6.0", + "sha256": "037l1cav2vglcd2pgp8n89apfpsb3822mhzmdsxf7a0mzcwjlq9l", "depends": ["abind", "checkmate", "distributional", "matrixStats", "pillar", "rlang", "tensorA", "tibble", "vctrs"] }, "postinfectious": { @@ -95627,7 +96629,7 @@ "name": "povmap", "version": "1.0.1", "sha256": "1qr4i7ph17mzhjamssc6h4q02mw6jykl2kqc5n3i7vfp88q4frcp", - "depends": ["bestNormalize", "boot", "formula_tools", "ggplot2", "gridExtra", "HLMdiag", "MASS", "moments", "MuMIn", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "saeRobust", "sf", "spdep", "stringr", "survey"] + "depends": ["HLMdiag", "MASS", "MuMIn", "bestNormalize", "boot", "formula_tools", "ggplot2", "gridExtra", "moments", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "saeRobust", "sf", "spdep", "stringr", "survey"] }, "pow_int": { "name": "pow.int", @@ -95645,7 +96647,7 @@ "name": "powdR", "version": "1.3.0", "sha256": "1bkx43xd46gzgiphknqyz2nyvviia0xkn4h8z4k2dwcfq92iwsbw", - "depends": ["baseline", "DT", "factoextra", "FactoMineR", "ggplot2", "ggpubr", "nnls", "plotly", "plyr", "reshape", "rxylib", "shiny", "shinyWidgets", "tidyr"] + "depends": ["DT", "FactoMineR", "baseline", "factoextra", "ggplot2", "ggpubr", "nnls", "plotly", "plyr", "reshape", "rxylib", "shiny", "shinyWidgets", "tidyr"] }, "powdist": { "name": "powdist", @@ -95653,6 +96655,12 @@ "sha256": "1my88ag5q9hwkn2wy79jl9008gpvg0bsrnyc81gkdfi7pjh2mp1z", "depends": ["gamlss_dist", "normalp", "rmutil"] }, + "poweRbal": { + "name": "poweRbal", + "version": "0.0.1.1", + "sha256": "16n331pyc41cy59cvp9fidvy3dzi68nw64lg6862amzna72nk85b", + "depends": ["R_utils", "ape", "diversitree", "phytools", "scales", "treebalance"] + }, "poweRlaw": { "name": "poweRlaw", "version": "0.80.0", @@ -95689,11 +96697,17 @@ "sha256": "08zszskhd21pbjamch5q7v7vx2p78c1d53zrp31hmpxk1ymx2xf3", "depends": [] }, + "powerNLSEM": { + "name": "powerNLSEM", + "version": "0.1.1", + "sha256": "08l8yfry95zdfdi809vyymv71gal54jb8jlyxkpa08iwj7zyybc4", + "depends": ["crayon", "ggplot2", "lavaan", "mvtnorm", "numDeriv", "pbapply", "rlang", "stringr"] + }, "powerPLS": { "name": "powerPLS", "version": "0.1.0", "sha256": "03y06wnd8i3lkw5fakihgrb9karjfw496vfygqgl8b6fxb2nz2yw", - "depends": ["compositions", "foreach", "ks", "MASS", "mvtnorm", "nipals", "simukde"] + "depends": ["MASS", "compositions", "foreach", "ks", "mvtnorm", "nipals", "simukde"] }, "powerSurvEpi": { "name": "powerSurvEpi", @@ -95711,7 +96725,7 @@ "name": "powerbydesign", "version": "1.0.5", "sha256": "006m127rc49bshgljd5d3ii6sfx24ndn2690ixj0vnqm2dp3zjnw", - "depends": ["gdata", "ggplot2", "lme4", "MASS", "plyr", "reshape2", "stringr"] + "depends": ["MASS", "gdata", "ggplot2", "lme4", "plyr", "reshape2", "stringr"] }, "powerindexR": { "name": "powerindexR", @@ -95729,7 +96743,7 @@ "name": "powerly", "version": "1.8.6", "sha256": "0vc2wpx2b4i9vx9jvvlywq5w4dx22bn4r9fcwz123h1m09252ng8", - "depends": ["bootnet", "ggplot2", "mvtnorm", "osqp", "patchwork", "progress", "qgraph", "quadprog", "R6", "rlang", "splines2"] + "depends": ["R6", "bootnet", "ggplot2", "mvtnorm", "osqp", "patchwork", "progress", "qgraph", "quadprog", "rlang", "splines2"] }, "powerpkg": { "name": "powerpkg", @@ -95737,6 +96751,12 @@ "sha256": "18cq3zsdvzmqjp0niq0libjk4riarmiar3h6lifq54spqgrvvxh2", "depends": [] }, + "ppRank": { + "name": "ppRank", + "version": "0.1.0", + "sha256": "1843cnrdiwns14471dnjq8i5wxkp3p1sj4rw74zzy9w3ydcc3v1z", + "depends": [] + }, "ppRep": { "name": "ppRep", "version": "0.42.3", @@ -95747,7 +96767,7 @@ "name": "ppcSpatial", "version": "0.3.0", "sha256": "0dxl5vv41462vhhdvbjczcghp0rv2f2101qygn4cldfihja397y9", - "depends": ["dplyr", "ggplot2", "htmltools", "htmlwidgets", "leaflet", "magrittr", "PakPC2017", "scales", "shiny", "tidyr", "tmap"] + "depends": ["PakPC2017", "dplyr", "ggplot2", "htmltools", "htmlwidgets", "leaflet", "magrittr", "scales", "shiny", "tidyr", "tmap"] }, "ppcc": { "name": "ppcc", @@ -95759,7 +96779,7 @@ "name": "ppclust", "version": "1.1.0.1", "sha256": "1lrha08i5cp8f6670d6207jp6ad4vnmwq0lxfrlr9vhaxbs5akgi", - "depends": ["inaparc", "MASS"] + "depends": ["MASS", "inaparc"] }, "ppcor": { "name": "ppcor", @@ -95775,15 +96795,15 @@ }, "ppendemic": { "name": "ppendemic", - "version": "0.1.7", - "sha256": "0f9gqhkgg1vd3di1xfx0ix4is30v3abcyldpkbnj81kv60zmzcfr", - "depends": [] + "version": "0.1.8", + "sha256": "1glk6l78pb4076a059api2a963yfly5d47dc4pkf6bj3df927l10", + "depends": ["assertthat", "dplyr", "fuzzyjoin", "memoise", "progress", "purrr", "readr", "stringr", "tibble", "tidyr"] }, "ppgam": { "name": "ppgam", - "version": "1.0.1", - "sha256": "0w2jci5k0y8m7rapj8w6xq849y59m7y4fp9n3f5l6q954mbc6bv0", - "depends": ["evgam", "MASS", "mgcv"] + "version": "1.0.2", + "sha256": "0k5xcsjk3kb6k702dd5aq1z6m8g6w0kly0z169ymviidicgqphw3", + "depends": ["MASS", "evgam", "mgcv"] }, "ppgm": { "name": "ppgm", @@ -95795,7 +96815,7 @@ "name": "ppgmmga", "version": "1.3", "sha256": "0ms6pqhdvws6dp27mgvwdm039h6z3psgbdmy2k6wq1wqr5jbsiz1", - "depends": ["cli", "crayon", "GA", "ggplot2", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["GA", "Rcpp", "RcppArmadillo", "cli", "crayon", "ggplot2", "mclust"] }, "ppitables": { "name": "ppitables", @@ -95837,7 +96857,7 @@ "name": "ppsbm", "version": "0.2.2", "sha256": "0y4whxv14jqx7mqxj7n427vpbxb5rkwj8xvx0mj4knnwy9v437z4", - "depends": ["clue", "gtools", "Rfast"] + "depends": ["Rfast", "clue", "gtools"] }, "ppseq": { "name": "ppseq", @@ -95855,7 +96875,7 @@ "name": "pqantimalarials", "version": "0.2", "sha256": "0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1", - "depends": ["plyr", "RColorBrewer", "reshape2", "shiny"] + "depends": ["RColorBrewer", "plyr", "reshape2", "shiny"] }, "pql": { "name": "pql", @@ -95867,7 +96887,7 @@ "name": "pqrBayes", "version": "1.0.2", "sha256": "0mbhkha99qyk5hkpk13ysb0686lcn6q9vq34838fz1l7xy47mzw3", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] }, "pqrfe": { "name": "pqrfe", @@ -95909,7 +96929,7 @@ "name": "practicalSigni", "version": "0.1.2", "sha256": "1ymq5mkp0y0zjgjvfdq3wx5qig9fiibnff4irgwkrckvp58xc9fn", - "depends": ["generalCorr", "hypergeo", "NNS", "np", "randomForest", "ShapleyValue", "xtable"] + "depends": ["NNS", "ShapleyValue", "generalCorr", "hypergeo", "np", "randomForest", "xtable"] }, "prais": { "name": "prais", @@ -95933,7 +96953,7 @@ "name": "prcbench", "version": "1.1.8", "sha256": "0h49cgzaqcy97gl57glh0z34g7dnx4wr4y8a1h7r3nxgkvdcvx74", - "depends": ["assertthat", "ggplot2", "gridExtra", "memoise", "precrec", "PRROC", "R6", "Rcpp", "ROCR"] + "depends": ["PRROC", "R6", "ROCR", "Rcpp", "assertthat", "ggplot2", "gridExtra", "memoise", "precrec"] }, "prclust": { "name": "prclust", @@ -95951,7 +96971,7 @@ "name": "pre", "version": "1.0.7", "sha256": "170kfyhnb6hqyknkf4h6cxcaif6z2m8n6gslyj88sfch2xbfx0b1", - "depends": ["earth", "Formula", "glmnet", "Matrix", "MatrixModels", "partykit", "rpart", "stringr", "survival"] + "depends": ["Formula", "Matrix", "MatrixModels", "earth", "glmnet", "partykit", "rpart", "stringr", "survival"] }, "precintcon": { "name": "precintcon", @@ -95975,13 +96995,13 @@ "name": "precmed", "version": "1.0.0", "sha256": "1hkdm1fqq9fswfii9ac016xfnbggdvxcvazi5l8ir0vna9jfkcwb", - "depends": ["dplyr", "gam", "gbm", "ggplot2", "glmnet", "MASS", "MESS", "mgcv", "randomForestSRC", "rlang", "stringr", "survival", "tidyr"] + "depends": ["MASS", "MESS", "dplyr", "gam", "gbm", "ggplot2", "glmnet", "mgcv", "randomForestSRC", "rlang", "stringr", "survival", "tidyr"] }, "precommit": { "name": "precommit", - "version": "0.4.2", - "sha256": "15ll48m3aw7gg99vqvbrygms6hwlpgmpnz56n7x1drqwzl59qgf7", - "depends": ["cli", "fs", "here", "magrittr", "purrr", "R_cache", "rlang", "rprojroot", "withr", "yaml"] + "version": "0.4.3", + "sha256": "0rh5vrr6q3z4pqm4548v3mxfcf681kpamkq8q54w49hhlp73dgmi", + "depends": ["R_cache", "cli", "fs", "here", "magrittr", "purrr", "rlang", "rprojroot", "withr", "yaml"] }, "precondition": { "name": "precondition", @@ -95993,7 +97013,7 @@ "name": "precrec", "version": "0.14.4", "sha256": "03hvp5h7fz4v2aswxim0mqgj9rdrhnk5xqz212161kpcrw6m67z8", - "depends": ["assertthat", "data_table", "ggplot2", "gridExtra", "Rcpp", "rlang", "withr"] + "depends": ["Rcpp", "assertthat", "data_table", "ggplot2", "gridExtra", "rlang", "withr"] }, "predReliability": { "name": "predReliability", @@ -96023,7 +97043,7 @@ "name": "predhy.GUI", "version": "2.0.1", "sha256": "04grfxb18vqhdh3ylq7dm3z3kal21nkr33pgj9698lzy1gn6ki22", - "depends": ["BGLR", "data_table", "doParallel", "DT", "foreach", "glmnet", "htmltools", "lightgbm", "pls", "predhy", "shiny", "xgboost"] + "depends": ["BGLR", "DT", "data_table", "doParallel", "foreach", "glmnet", "htmltools", "lightgbm", "pls", "predhy", "shiny", "xgboost"] }, "predict3d": { "name": "predict3d", @@ -96035,7 +97055,7 @@ "name": "predictMe", "version": "0.1", "sha256": "0n4sv9ahyvly17grlilybb7vwq9pzyn6mvhcn8z9cyswqa7svs49", - "depends": ["ggplot2", "Rdpack", "reshape2"] + "depends": ["Rdpack", "ggplot2", "reshape2"] }, "predictNMB": { "name": "predictNMB", @@ -96053,19 +97073,19 @@ "name": "predictionInterval", "version": "1.0.0", "sha256": "029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn", - "depends": ["ggplot2", "MASS", "MBESS", "pbapply"] + "depends": ["MASS", "MBESS", "ggplot2", "pbapply"] }, "predictmeans": { "name": "predictmeans", "version": "1.1.0", "sha256": "1010s79c55vndv3v4my0xrmdxvgpy7vhp46j1anxvr3xzgx1279q", - "depends": ["car", "ggplot2", "glmmTMB", "HRW", "lme4", "lmeInfo", "lmerTest", "lmeSplines", "MASS", "Matrix", "nlme", "numDeriv", "pbkrtest", "plotly", "plyr", "splines2"] + "depends": ["HRW", "MASS", "Matrix", "car", "ggplot2", "glmmTMB", "lme4", "lmeInfo", "lmeSplines", "lmerTest", "nlme", "numDeriv", "pbkrtest", "plotly", "plyr", "splines2"] }, "predictoR": { "name": "predictoR", "version": "3.0.10", "sha256": "0lj13rn9dpx0rqxb03abisa06ihphmrq5shpv6q2p0qb857pgmkf", - "depends": ["colourpicker", "config", "dplyr", "DT", "echarts4r", "glmnet", "golem", "htmltools", "loadeR", "rlang", "rpart_plot", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "traineR", "xgboost", "xtable"] + "depends": ["DT", "colourpicker", "config", "dplyr", "echarts4r", "glmnet", "golem", "htmltools", "loadeR", "rlang", "rpart_plot", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "traineR", "xgboost", "xtable"] }, "predictrace": { "name": "predictrace", @@ -96083,31 +97103,31 @@ "name": "predieval", "version": "0.1.1", "sha256": "096zfb94iixza0lfzr4p21gkcs9hl7h0d5jhbzdi3hhyz80zymrj", - "depends": ["ggplot2", "Hmisc", "MASS", "Matching"] + "depends": ["Hmisc", "MASS", "Matching", "ggplot2"] }, "predint": { "name": "predint", "version": "2.2.1", "sha256": "1db5nzwhj2zjzqpdrp0phcwxxgn4pdphb05hjlyc9r58hspg8k11", - "depends": ["ggplot2", "lme4", "MASS"] + "depends": ["MASS", "ggplot2", "lme4"] }, "predkmeans": { "name": "predkmeans", "version": "0.1.1", "sha256": "0352c50zlyzn8fczrkinayllj9jp978njjl7dazzkzypx0p20va5", - "depends": ["e1071", "maxLik", "mgcv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "e1071", "maxLik", "mgcv"] }, "predtools": { "name": "predtools", "version": "0.0.3", "sha256": "150jlfbjvhnvvvbbjsr3hc0v778p9lyj8ml167inzbw4cynk2g9j", - "depends": ["dplyr", "ggplot2", "magrittr", "mvtnorm", "pROC", "RConics", "Rcpp"] + "depends": ["RConics", "Rcpp", "dplyr", "ggplot2", "magrittr", "mvtnorm", "pROC"] }, "predtoolsTS": { "name": "predtoolsTS", "version": "0.1.1", "sha256": "0f9fapw9yjdzj6pwcskbyfwjsvg09ahn20vrv4bgi0dx8am291rl", - "depends": ["caret", "forecast", "Metrics", "tseries", "TSPred"] + "depends": ["Metrics", "TSPred", "caret", "forecast", "tseries"] }, "pref": { "name": "pref", @@ -96233,7 +97253,7 @@ "name": "prettifyAddins", "version": "2.6.1", "sha256": "0ncj10j1ygc1dhlqdg5vklzf258bjbg6mry8i8vqqh1dxvl2djwr", - "depends": ["chromote", "httr", "rstudioapi", "shiny", "webdriver", "xml2", "XRJulia"] + "depends": ["XRJulia", "chromote", "httr", "rstudioapi", "shiny", "webdriver", "xml2"] }, "prettyB": { "name": "prettyB", @@ -96269,7 +97289,7 @@ "name": "prettyglm", "version": "1.0.1", "sha256": "1pivjpnspis7zshdj7kasncb8qpy40ld9f40fwlb3x14snrvbqix", - "depends": ["broom", "car", "dplyr", "forcats", "kableExtra", "knitr", "plotly", "RColorBrewer", "stringr", "tibble", "tidycat", "tidyr", "tidyselect", "vip"] + "depends": ["RColorBrewer", "broom", "car", "dplyr", "forcats", "kableExtra", "knitr", "plotly", "stringr", "tibble", "tidycat", "tidyr", "tidyselect", "vip"] }, "prettymapr": { "name": "prettymapr", @@ -96287,7 +97307,7 @@ "name": "prevR", "version": "5.0.0", "sha256": "17sygcfj29cvycsi1d2870gwcqq1ij6gppsqj46phc04r8q5hs5v", - "depends": ["directlabels", "fields", "foreign", "ggplot2", "gstat", "KernSmooth", "sf", "stars"] + "depends": ["KernSmooth", "directlabels", "fields", "foreign", "ggplot2", "gstat", "sf", "stars"] }, "prevalence": { "name": "prevalence", @@ -96303,15 +97323,15 @@ }, "preventr": { "name": "preventr", - "version": "0.9.0", - "sha256": "06rl3xm8h5zmpmf9v7ibs12i2b4i8r9vlk56d4iyzbsww2hh13a7", + "version": "0.10.0", + "sha256": "1m7g2p38wb95m3rci29b4x65ks1m4cwlawxwkqqzshcwnknxm57g", "depends": ["dplyr"] }, "previsionio": { "name": "previsionio", "version": "11.7.0", "sha256": "08hrklr3ngphdhp50lkz6ls9nn1bzdvs6xj583spsw4vm7j44yfr", - "depends": ["data_table", "futile_logger", "httr", "jsonlite", "magrittr", "Metrics", "plotly", "XML"] + "depends": ["Metrics", "XML", "data_table", "futile_logger", "httr", "jsonlite", "magrittr", "plotly"] }, "prevtoinc": { "name": "prevtoinc", @@ -96321,8 +97341,8 @@ }, "priceR": { "name": "priceR", - "version": "1.0.1", - "sha256": "0yf7hgvbm8a0ks2c8wnim8b9kqk7dljnaahw7faq2lzn67751dqc", + "version": "1.0.2", + "sha256": "08s3sx3cmvvr7ibrybbw35pkvizhc8yqdikwhv9c0ljmv5q3qww9", "depends": ["dplyr", "gsubfn", "jsonlite", "lubridate", "purrr", "stringi", "stringr", "tidyr"] }, "pricelevels": { @@ -96371,7 +97391,7 @@ "name": "primerTree", "version": "1.0.6", "sha256": "1w2xmmpqsp8plwsacfknkjkgs4x1fksrks614jwlg6fll4zxh42n", - "depends": ["ape", "directlabels", "foreach", "ggplot2", "gridExtra", "httr", "lubridate", "plyr", "reshape2", "scales", "stringr", "XML"] + "depends": ["XML", "ape", "directlabels", "foreach", "ggplot2", "gridExtra", "httr", "lubridate", "plyr", "reshape2", "scales", "stringr"] }, "primes": { "name": "primes", @@ -96395,7 +97415,7 @@ "name": "prinvars", "version": "1.0.0", "sha256": "10cxp5dqjmi0kbx8g2qvpvwv2lcdg4sd2njg81l9g8dphx0c662f", - "depends": ["elasticnet", "PMA", "Rdpack"] + "depends": ["PMA", "Rdpack", "elasticnet"] }, "prioGene": { "name": "prioGene", @@ -96407,13 +97427,13 @@ "name": "prioriactions", "version": "0.5.0", "sha256": "0k0vaqpdj9rlxcmfn6qb1bj8ssbazj33qa4rg4l8agpf9x83n9f8", - "depends": ["assertthat", "BH", "dplyr", "magrittr", "Matrix", "proto", "Rcpp", "RcppArmadillo", "rlang", "tidyr"] + "depends": ["BH", "Matrix", "Rcpp", "RcppArmadillo", "assertthat", "dplyr", "magrittr", "proto", "rlang", "tidyr"] }, "prioritizr": { "name": "prioritizr", "version": "8.0.4", "sha256": "18z5zm34ry45kapp0a146gvwij41wyhhxxyzwiz7ly79l6lwgs9s", - "depends": ["ape", "assertthat", "BH", "cli", "exactextractr", "igraph", "magrittr", "Matrix", "R6", "raster", "Rcpp", "RcppArmadillo", "rlang", "sf", "slam", "terra", "tibble", "withr"] + "depends": ["BH", "Matrix", "R6", "Rcpp", "RcppArmadillo", "ape", "assertthat", "cli", "exactextractr", "igraph", "magrittr", "raster", "rlang", "sf", "slam", "terra", "tibble", "withr"] }, "prioritizrdata": { "name": "prioritizrdata", @@ -96427,6 +97447,12 @@ "sha256": "1vn4i7rg1nsir98lgaxnw4851rwyv8kx25z8nc942qsr3r7cvdf6", "depends": ["checkmate", "glmnet", "survival"] }, + "priorsense": { + "name": "priorsense", + "version": "1.0.2", + "sha256": "1gilv3w1nn7ika226p78lj4fba7icp5xc8wgf1vg3fg8m2jjq356", + "depends": ["checkmate", "ggdist", "ggh4x", "ggplot2", "matrixStats", "posterior", "rlang", "tibble"] + }, "prism": { "name": "prism", "version": "0.2.1", @@ -96491,7 +97517,7 @@ "name": "probe", "version": "1.1", "sha256": "1bgkbsx8aa0r5dpnr1nv2q9p6af40dfzl3g333wmdg1dd6d2zp4n", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] }, "probout": { "name": "probout", @@ -96499,6 +97525,12 @@ "sha256": "1x7q878xzw1b1c6jfx856akxzcxrwanv67jji2ifkcdx2hgmgvpx", "depends": ["FNN", "MASS", "mclust"] }, + "probs": { + "name": "probs", + "version": "0.9.9", + "sha256": "0gbivss3ydnjy1acjczf5khp40l4sk1r53pbx151bxrdq74q8a3i", + "depends": ["MASS", "combinat", "reshape"] + }, "probstats4econ": { "name": "probstats4econ", "version": "0.2.0", @@ -96521,7 +97553,7 @@ "name": "processanimateR", "version": "1.0.5", "sha256": "054m578ifb4hhlalijkdmjxifn36vy61sdzjgcr1gg4yxfi2fbx3", - "depends": ["bupaR", "DiagrammeR", "dplyr", "htmltools", "htmlwidgets", "magrittr", "processmapR", "rlang", "stringr", "tidyr"] + "depends": ["DiagrammeR", "bupaR", "dplyr", "htmltools", "htmlwidgets", "magrittr", "processmapR", "rlang", "stringr", "tidyr"] }, "processcheckR": { "name": "processcheckR", @@ -96531,9 +97563,9 @@ }, "processmapR": { "name": "processmapR", - "version": "0.5.3", - "sha256": "1q3zppi2hmvqaydwyjyann1zajvk19rww0mj4ra7kj20icg8520h", - "depends": ["BH", "bupaR", "cli", "data_table", "DiagrammeR", "dplyr", "edeaR", "forcats", "ggplot2", "glue", "hms", "htmltools", "lifecycle", "miniUI", "plotly", "purrr", "Rcpp", "rlang", "scales", "shiny", "stringr", "tidyr"] + "version": "0.5.4", + "sha256": "0jb69si8npmw92nfsd35wfzrj8jwfflaajsd6xxvyp1bhfvjsvn6", + "depends": ["BH", "DiagrammeR", "Rcpp", "bupaR", "cli", "data_table", "dplyr", "edeaR", "forcats", "ggplot2", "glue", "hms", "htmltools", "htmlwidgets", "lifecycle", "miniUI", "plotly", "purrr", "rlang", "scales", "shiny", "stringr", "tidyr"] }, "processmonitR": { "name": "processmonitR", @@ -96551,7 +97583,7 @@ "name": "processx", "version": "3.8.4", "sha256": "02z7n59pglz6jw1vyyl0mkc7mz2c7y8yzsnhq5yz62digwnnf9v6", - "depends": ["ps", "R6"] + "depends": ["R6", "ps"] }, "proclhmm": { "name": "proclhmm", @@ -96575,7 +97607,7 @@ "name": "prodest", "version": "1.0.1", "sha256": "16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509", - "depends": ["AER", "DEoptim", "dplyr", "Matrix", "Rsolnp"] + "depends": ["AER", "DEoptim", "Matrix", "Rsolnp", "dplyr"] }, "prodigenr": { "name": "prodigenr", @@ -96585,9 +97617,9 @@ }, "prodlim": { "name": "prodlim", - "version": "2023.08.28", - "sha256": "1s2xalxfq2q6a9ssz01vzpldpa98q3cl5icap0k2xr5v72gj40l0", - "depends": ["data_table", "diagram", "KernSmooth", "lava", "Rcpp", "survival"] + "version": "2024.06.25", + "sha256": "0r3780j04wy3ihrhvfm3qcwa9xjrxl43bcllzzq7xaki85jiz5j6", + "depends": ["KernSmooth", "Rcpp", "data_table", "diagram", "lava", "survival"] }, "productivity": { "name": "productivity", @@ -96605,13 +97637,13 @@ "name": "profExtrema", "version": "0.2.1", "sha256": "0gdhamnngh1yh3nb7l656qhdr61s0zn6h1hagh22k2fn11z3xhsl", - "depends": ["DiceKriging", "KrigInv", "lhs", "MASS", "microbenchmark", "pGPx", "quantreg", "rcdd", "RColorBrewer"] + "depends": ["DiceKriging", "KrigInv", "MASS", "RColorBrewer", "lhs", "microbenchmark", "pGPx", "quantreg", "rcdd"] }, "proffer": { "name": "proffer", "version": "0.1.6", "sha256": "0y94rwhg3gr63avmmwvfv84cgg08fya6vc7q535xjv1wspiyvjnl", - "depends": ["cli", "parallelly", "pingr", "processx", "profile", "RProtoBuf", "withr"] + "depends": ["RProtoBuf", "cli", "parallelly", "pingr", "processx", "profile", "withr"] }, "profile": { "name": "profile", @@ -96629,7 +97661,7 @@ "name": "profileR", "version": "0.3-5", "sha256": "0fgc7585a7194c67irafjnx8g2j6mn3qhcfn76c6dh28clp20qp9", - "depends": ["ggplot2", "lavaan", "RColorBrewer", "reshape"] + "depends": ["RColorBrewer", "ggplot2", "lavaan", "reshape"] }, "profiplots": { "name": "profiplots", @@ -96647,7 +97679,7 @@ "name": "profoc", "version": "1.3.2", "sha256": "1vs5l6f18maga6v27wschxzsbr5i4wqwsd64mz4z666rf92d7l60", - "depends": ["abind", "generics", "ggplot2", "lifecycle", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "rcpptimer", "splines2", "tibble"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "abind", "generics", "ggplot2", "lifecycle", "rcpptimer", "splines2", "tibble"] }, "profr": { "name": "profr", @@ -96683,7 +97715,7 @@ "name": "progress", "version": "1.2.3", "sha256": "0xljky4ad2jbbcfrcyh48li461pc5b2wk210n4x5rs2di6dhfaza", - "depends": ["crayon", "hms", "prettyunits", "R6"] + "depends": ["R6", "crayon", "hms", "prettyunits"] }, "progressr": { "name": "progressr", @@ -96719,7 +97751,7 @@ "name": "projpred", "version": "2.8.0", "sha256": "1xm1444qv0pkxdf2nacxnb2apx5lar1f3qz4jrxp6xd2xk2xv0xk", - "depends": ["abind", "gamm4", "ggplot2", "gtools", "lme4", "loo", "MASS", "mclogit", "mgcv", "mvtnorm", "nnet", "ordinal", "Rcpp", "RcppArmadillo", "rstantools", "scales"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "abind", "gamm4", "ggplot2", "gtools", "lme4", "loo", "mclogit", "mgcv", "mvtnorm", "nnet", "ordinal", "rstantools", "scales"] }, "prolific_api": { "name": "prolific.api", @@ -96737,7 +97769,7 @@ "name": "prome", "version": "1.9.1.0", "sha256": "134nc90av9js4qdq7dxy7z93h621i6w1vbgly38minprfam0wwm0", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "promethee123": { "name": "promethee123", @@ -96749,13 +97781,13 @@ "name": "promises", "version": "1.3.0", "sha256": "1lzs65csxaq26d1g37qjjgxzm418xv52c3ccpk0l0cxkpbrrs87q", - "depends": ["fastmap", "later", "magrittr", "R6", "Rcpp", "rlang"] + "depends": ["R6", "Rcpp", "fastmap", "later", "magrittr", "rlang"] }, "promor": { "name": "promor", "version": "0.2.1", "sha256": "0cpf6946522lhnsr6fxm8ppvq69vjpkx7p7p0chx7kibc9ivb1ia", - "depends": ["caret", "ggplot2", "ggrepel", "gridExtra", "kernlab", "limma", "missForest", "naivebayes", "pcaMethods", "pROC", "reshape2", "statmod", "VIM", "viridis", "xgboost"] + "depends": ["VIM", "caret", "ggplot2", "ggrepel", "gridExtra", "kernlab", "limma", "missForest", "naivebayes", "pROC", "pcaMethods", "reshape2", "statmod", "viridis", "xgboost"] }, "promote": { "name": "promote", @@ -96767,7 +97799,7 @@ "name": "promotionImpact", "version": "0.1.5", "sha256": "18iq2r5zirddlfx20alm6qnxf9qv3ii3c9bcm789q0q18d2hyj2q", - "depends": ["crayon", "dplyr", "ggplot2", "ggpubr", "KernSmooth", "lmtest", "prophet", "Rcpp", "reshape2", "scales", "stringr", "strucchange"] + "depends": ["KernSmooth", "Rcpp", "crayon", "dplyr", "ggplot2", "ggpubr", "lmtest", "prophet", "reshape2", "scales", "stringr", "strucchange"] }, "prompt": { "name": "prompt", @@ -96803,7 +97835,7 @@ "name": "propagate", "version": "1.0-6", "sha256": "17jinz1jramlsf87i7vyn2qp82rc1dacljfaxxplrk3crhw3bhs7", - "depends": ["ff", "MASS", "minpack_lm", "Rcpp", "tmvtnorm"] + "depends": ["MASS", "Rcpp", "ff", "minpack_lm", "tmvtnorm"] }, "properties": { "name": "properties", @@ -96815,7 +97847,7 @@ "name": "prophet", "version": "1.0", "sha256": "06mryavky9xj54ig4scqjgpx7i56nwhs53g0zqsbs9f6qxja7gll", - "depends": ["BH", "dplyr", "dygraphs", "extraDistr", "ggplot2", "lubridate", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "scales", "StanHeaders", "tidyr", "xts"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "dygraphs", "extraDistr", "ggplot2", "lubridate", "rlang", "rstan", "rstantools", "scales", "tidyr", "xts"] }, "proporz": { "name": "proporz", @@ -96827,7 +97859,7 @@ "name": "prospectr", "version": "0.2.7", "sha256": "0hg2afw5aixx0xdwwr6g0wi8sksn7r21hz8diyqxg2345rwnzbg4", - "depends": ["foreach", "iterators", "lifecycle", "mathjaxr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "foreach", "iterators", "lifecycle", "mathjaxr"] }, "protHMM": { "name": "protHMM", @@ -96845,7 +97877,7 @@ "name": "protag", "version": "1.0.0", "sha256": "1iaw2w1d7hdvlg5vplpqc49wq08dgmm0ifvp2v0ggqb8invvdnw8", - "depends": ["dplyr", "ggplot2", "RColorBrewer"] + "depends": ["RColorBrewer", "dplyr", "ggplot2"] }, "protein8k": { "name": "protein8k", @@ -96855,15 +97887,15 @@ }, "proteomicsCV": { "name": "proteomicsCV", - "version": "0.2.5", - "sha256": "0wkyp21ns3k8812k109ilm9yi1y89m524cwwpa4wr0vqy65lrgba", + "version": "0.3.0", + "sha256": "0gvjl47x1wca2y386if2fgzp8k7a1xn9qxlq82ml66n193bp4k6a", "depends": [] }, "proteus": { "name": "proteus", "version": "1.1.4", "sha256": "1i8h07k5pdsywpw5g8d06xgl5gk06g5q93jimfwkbry9ykagh1cw", - "depends": ["abind", "actuar", "dplyr", "fANCOVA", "furrr", "future", "ggplot2", "ggthemes", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "purrr", "readr", "scales", "sn", "stringr", "tictoc", "torch", "VGAM"] + "depends": ["VGAM", "abind", "actuar", "dplyr", "fANCOVA", "furrr", "future", "ggplot2", "ggthemes", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "purrr", "readr", "scales", "sn", "stringr", "tictoc", "torch"] }, "proto": { "name": "proto", @@ -96881,7 +97913,7 @@ "name": "protolite", "version": "2.3.0", "sha256": "1sccyyf89bban3b83yxzkcyqpgcp7ggm9lirxixzjj433baj9vsk", - "depends": ["jsonlite", "Rcpp"] + "depends": ["Rcpp", "jsonlite"] }, "proton": { "name": "proton", @@ -96899,25 +97931,25 @@ "name": "prototest", "version": "1.2", "sha256": "07g58hq2qdpczqhjsv6dq1bya9rs958r103n91icw5yc19bvyhi2", - "depends": ["glmnet", "intervals", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmnet", "intervals"] }, "protr": { "name": "protr", - "version": "1.7-1", - "sha256": "1dakbkj07l2mnmnmi9j2xv0lk1bm8qpzac8s9gg7j4xpwsf0yyl7", + "version": "1.7-2", + "sha256": "0qkp9h6kndr5vkgqckzhhy7dsidbynpns3bap3r3gy2p1wzwmhx5", "depends": [] }, "protti": { "name": "protti", - "version": "0.8.0", - "sha256": "052ffldvy7a1h1z1c2gq9hdmhhwwiia5l6cyikq5j7yb8g1ff1n3", - "depends": ["curl", "data_table", "dplyr", "forcats", "ggplot2", "ggrepel", "httr", "janitor", "lifecycle", "magrittr", "plotly", "progress", "purrr", "R_utils", "readr", "rlang", "stringr", "tibble", "tidyr"] + "version": "0.9.0", + "sha256": "1lnlikkgw0cvyw6sh49fzzwin31vya3dgq6zyash51vf6i3nc992", + "depends": ["R_utils", "curl", "data_table", "dplyr", "forcats", "ggplot2", "ggrepel", "httr", "janitor", "lifecycle", "magrittr", "plotly", "progress", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr"] }, "proustr": { "name": "proustr", "version": "0.4.0", "sha256": "1qp4v4vb1qh137qn7zi1d2g999z17kq6kpyxy9355mj8c49iy8pn", - "depends": ["attempt", "rlang", "SnowballC", "stringr", "tidyr", "tokenizers"] + "depends": ["SnowballC", "attempt", "rlang", "stringr", "tidyr", "tokenizers"] }, "provDebugR": { "name": "provDebugR", @@ -96935,7 +97967,7 @@ "name": "provGraphR", "version": "1.0.1", "sha256": "0flq20i2m2dhkjjnipb4fash32db5pnlrwswqw1v1028vgv4yfnq", - "depends": ["igraph", "Matrix", "provParseR"] + "depends": ["Matrix", "igraph", "provParseR"] }, "provParseR": { "name": "provParseR", @@ -96995,7 +98027,7 @@ "name": "prozor", "version": "0.3.1", "sha256": "0gcjfjsvj2pjp9ih7nxvs9gfj5b94g8d3ziaz16wfbnjqm4a38lp", - "depends": ["AhoCorasickTrie", "docopt", "dplyr", "Matrix", "purrr", "readr", "rlang", "seqinr", "stringr"] + "depends": ["AhoCorasickTrie", "Matrix", "docopt", "dplyr", "purrr", "readr", "rlang", "seqinr", "stringr"] }, "prqlr": { "name": "prqlr", @@ -97007,7 +98039,7 @@ "name": "prrd", "version": "0.0.6", "sha256": "1wr469jvzgsic38x8xr72lx7px0k6l957z4hl63bgj7w2dczwyqz", - "depends": ["config", "crayon", "data_table", "DBI", "liteq", "RSQLite"] + "depends": ["DBI", "RSQLite", "config", "crayon", "data_table", "liteq"] }, "prt": { "name": "prt", @@ -97019,25 +98051,25 @@ "name": "pryr", "version": "0.1.6", "sha256": "013p2xxd51kr9ddx051cvn45mzgj44fm47nkchdb13l0885a7hb8", - "depends": ["codetools", "lobstr", "Rcpp", "stringr"] + "depends": ["Rcpp", "codetools", "lobstr", "stringr"] }, "ps": { "name": "ps", - "version": "1.7.6", - "sha256": "1lkd0mxr65sfh47dig0ck530kmsaxxqxdfy7ji59h78y7py5zhsj", + "version": "1.7.7", + "sha256": "1wi27l0a3z7wkrgn97jj5yqx6khy3brycj0y8nhlxagsp2rdrzj6", "depends": [] }, "psBayesborrow": { "name": "psBayesborrow", "version": "1.1.0", "sha256": "1kxwb9kvxykapw8mmihazx1wbd4z3yqwyj09dli6h82zcq2w220n", - "depends": ["BH", "boot", "copula", "e1071", "MatchIt", "optmatch", "overlapping", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "survival"] + "depends": ["BH", "MatchIt", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "boot", "copula", "e1071", "optmatch", "overlapping", "rstan", "rstantools", "survival"] }, "psData": { "name": "psData", "version": "0.2.2", "sha256": "013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4", - "depends": ["countrycode", "DataCombine", "reshape2", "rio", "xlsx"] + "depends": ["DataCombine", "countrycode", "reshape2", "rio", "xlsx"] }, "psSubpathway": { "name": "psSubpathway", @@ -97049,25 +98081,25 @@ "name": "psbcGroup", "version": "1.7", "sha256": "08gabhcpjsm92xrld3h14y092x05apz4b1znf10d6j3n1880fbl4", - "depends": ["LearnBayes", "mvtnorm", "SuppDists", "survival"] + "depends": ["LearnBayes", "SuppDists", "mvtnorm", "survival"] }, "psbcSpeedUp": { "name": "psbcSpeedUp", - "version": "2.0.6", - "sha256": "0dyvpdr9jafnac0m7x8rdsjbsl0fbd3c5lzc5483p3nnnynnml4q", - "depends": ["GGally", "ggplot2", "MASS", "Rcpp", "RcppArmadillo", "riskRegression", "survival", "xml2"] + "version": "2.0.7", + "sha256": "12nzqg67wpycalv31d04h8qq519c2i2rkxpqdnf1vb6w84c6nknv", + "depends": ["GGally", "MASS", "Rcpp", "RcppArmadillo", "ggplot2", "riskRegression", "survival", "xml2"] }, "psborrow": { "name": "psborrow", "version": "0.2.1", "sha256": "0m2jcf5awlwkzscsps0fczpaflxzi0w6m9qxlzm7abip277lhgpd", - "depends": ["data_table", "doParallel", "dplyr", "foreach", "futile_logger", "ggplot2", "MatchIt", "mvtnorm", "rjags", "survival"] + "depends": ["MatchIt", "data_table", "doParallel", "dplyr", "foreach", "futile_logger", "ggplot2", "mvtnorm", "rjags", "survival"] }, "psborrow2": { "name": "psborrow2", "version": "0.0.3.4", "sha256": "05mcfbgkdlx6yfiysvh3yk75c8rdcci7ql89n76vlm9h17ff5fm1", - "depends": ["checkmate", "future", "generics", "glue", "Matrix", "mvtnorm", "posterior", "simsurv"] + "depends": ["Matrix", "checkmate", "future", "generics", "glue", "mvtnorm", "posterior", "simsurv"] }, "pscl": { "name": "pscl", @@ -97079,7 +98111,7 @@ "name": "pscore", "version": "0.4.0", "sha256": "0flzqr9x0z2mjnbm5cjm8hqndkbv2yp11agkx89mbaafsg0hmjn1", - "depends": ["ggplot2", "JWileymisc", "lavaan", "reshape2"] + "depends": ["JWileymisc", "ggplot2", "lavaan", "reshape2"] }, "psd": { "name": "psd", @@ -97097,7 +98129,7 @@ "name": "pseudo", "version": "1.4.3", "sha256": "0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs", - "depends": ["geepack", "KMsurv"] + "depends": ["KMsurv", "geepack"] }, "pseudohouseholds": { "name": "pseudohouseholds", @@ -97121,19 +98153,19 @@ "name": "psgp", "version": "0.3-21", "sha256": "1pcg6q1g5ipial8kyk20n15zzls4ig0m0sxcc7d3ngryir89cyzs", - "depends": ["automap", "doParallel", "foreach", "gstat", "intamap", "Rcpp", "RcppArmadillo", "sp"] + "depends": ["Rcpp", "RcppArmadillo", "automap", "doParallel", "foreach", "gstat", "intamap", "sp"] }, "psica": { "name": "psica", "version": "1.0.2", "sha256": "1cnrd1p8ikv0hl97jwypw8np1ypa0d8k2mizwd1clkv7inbb264g", - "depends": ["BayesTree", "gridBase", "party", "partykit", "randomForest", "Rdpack", "rpart"] + "depends": ["BayesTree", "Rdpack", "gridBase", "party", "partykit", "randomForest", "rpart"] }, "psidR": { "name": "psidR", "version": "2.2", "sha256": "0vfvx5aidd7g3s02hajnlfr8c0czzzbsrkgzfw5zx1lm4rxw8z26", - "depends": ["data_table", "foreign", "futile_logger", "openxlsx", "RCurl", "SAScii"] + "depends": ["RCurl", "SAScii", "data_table", "foreign", "futile_logger", "openxlsx"] }, "psidread": { "name": "psidread", @@ -97145,7 +98177,7 @@ "name": "psm3mkv", "version": "0.3.2", "sha256": "0fbqyqgmjzqncx68x1cydfa9cm5k00k57d7hbb0iffcq08c0ya36", - "depends": ["admiral", "dplyr", "flexsurv", "ggplot2", "pharmaverseadam", "purrr", "rlang", "SimplicialCubature", "stringr", "survival", "tibble", "tidyr"] + "depends": ["SimplicialCubature", "admiral", "dplyr", "flexsurv", "ggplot2", "pharmaverseadam", "purrr", "rlang", "stringr", "survival", "tibble", "tidyr"] }, "psmineR": { "name": "psmineR", @@ -97167,15 +98199,15 @@ }, "psp": { "name": "psp", - "version": "1.0.0", - "sha256": "0fjpjzf0m1f5xw1jrxn78m4r8ghwkcs2fsfhivbvws31gc11h7k0", - "depends": ["data_table", "Rcpp", "RcppArmadillo"] + "version": "1.0.2", + "sha256": "10b93c3x39304j9wz2fqlmx1x417vpzdi9b11bjil8brdg5qipk6", + "depends": ["Rcpp", "RcppArmadillo", "data_table"] }, "pspatreg": { "name": "pspatreg", "version": "1.1.2", "sha256": "0giaxz7zdwik6qw9xlgipxwksdia044y2h64ik2bz03hi21w5n2i", - "depends": ["AmesHousing", "dplyr", "fields", "ggplot2", "MASS", "Matrix", "MBA", "minqa", "numDeriv", "plm", "Rdpack", "sf", "spatialreg", "spdep", "stringr"] + "depends": ["AmesHousing", "MASS", "MBA", "Matrix", "Rdpack", "dplyr", "fields", "ggplot2", "minqa", "numDeriv", "plm", "sf", "spatialreg", "spdep", "stringr"] }, "pspearman": { "name": "pspearman", @@ -97199,13 +98231,13 @@ "name": "pssmooth", "version": "1.0.3", "sha256": "08syh52gjaf72kq01v6b5dljmwi29nvmjmkkgmjb97zsi15z1wd3", - "depends": ["chngpt", "MASS", "np", "osDesign"] + "depends": ["MASS", "chngpt", "np", "osDesign"] }, "pstest": { "name": "pstest", "version": "0.1.3.900", "sha256": "1rhd4vgqpr9yq0pc3xql3nfgl30v20ldywapp9n967ky2dja4k0z", - "depends": ["glmx", "MASS"] + "depends": ["MASS", "glmx"] }, "psy": { "name": "psy", @@ -97227,9 +98259,9 @@ }, "psych": { "name": "psych", - "version": "2.4.3", - "sha256": "0ic479y314knn20m1cjlp15lji7f70xrg95ln570pgkhrk5853bi", - "depends": ["lattice", "mnormt", "nlme"] + "version": "2.4.6.26", + "sha256": "1gnjpcpqlviyyj5myhy440fj1zwx14b9jwhp5907yyhhw2ail69d", + "depends": ["GPArotation", "lattice", "mnormt", "nlme"] }, "psychReport": { "name": "psychReport", @@ -97245,8 +98277,8 @@ }, "psychmeta": { "name": "psychmeta", - "version": "2.6.5", - "sha256": "0rdbi432kr433rqy5y8rjh11cq66zcc8zr4nckjqw88hsz4qhin4", + "version": "2.7.0", + "sha256": "1705zj755sw6pigyqrh62z84cpi3yvgmqfzn8gl7bpgc1fjyryck", "depends": ["boot", "curl", "dplyr", "ggplot2", "metafor", "progress", "purrr", "rlang", "tibble", "tidyr"] }, "psycho": { @@ -97265,13 +98297,13 @@ "name": "psychomix", "version": "1.1-8", "sha256": "0lfhfcmrk65gkr1yp317b515vmadbcf0vjcnc76d07yp6yfkz5qw", - "depends": ["flexmix", "Formula", "lattice", "modeltools", "psychotools"] + "depends": ["Formula", "flexmix", "lattice", "modeltools", "psychotools"] }, "psychonetrics": { "name": "psychonetrics", - "version": "0.12", - "sha256": "0kpfkn1sy773vafh7jxbdmcawyssl7lkvr8bg0wr864dq6j1jjbc", - "depends": ["abind", "combinat", "corpcor", "dplyr", "GA", "glasso", "IsingSampler", "lavaan", "magrittr", "Matrix", "mgcv", "numDeriv", "optimx", "pbapply", "pbv", "psych", "qgraph", "Rcpp", "RcppArmadillo", "rlang", "roptim", "tidyr", "VCA"] + "version": "0.13", + "sha256": "0yrpw1dcz8mzfydv48dk4liqhfcwqh3s7c9xpfcniisab5hvq3m6", + "depends": ["GA", "IsingSampler", "Matrix", "Rcpp", "RcppArmadillo", "VCA", "abind", "combinat", "corpcor", "dplyr", "glasso", "lavaan", "magrittr", "mgcv", "numDeriv", "optimx", "pbapply", "pbv", "psych", "qgraph", "rlang", "roptim", "tidyr"] }, "psychotools": { "name": "psychotools", @@ -97301,7 +98333,7 @@ "name": "psyntur", "version": "0.1.0", "sha256": "0dh7vdj3ynsxibcf0wmh5h4yknijg78azjzlma25glihpgd2nbbw", - "depends": ["dplyr", "effsize", "ez", "fastDummies", "formula_tools", "GGally", "ggplot2", "ggthemes", "magrittr", "plyr", "psych", "purrr", "rlang", "tidyr", "tidyselect"] + "depends": ["GGally", "dplyr", "effsize", "ez", "fastDummies", "formula_tools", "ggplot2", "ggthemes", "magrittr", "plyr", "psych", "purrr", "rlang", "tidyr", "tidyselect"] }, "psyphy": { "name": "psyphy", @@ -97319,7 +98351,7 @@ "name": "ptable", "version": "1.0.0", "sha256": "142nw1rq9nm9fc6amcsdfy4qnv89p5yz90cxxbw1r4bylm86grs2", - "depends": ["data_table", "flexdashboard", "ggplot2", "nloptr", "RColorBrewer", "rlang", "rmarkdown"] + "depends": ["RColorBrewer", "data_table", "flexdashboard", "ggplot2", "nloptr", "rlang", "rmarkdown"] }, "ptinpoly": { "name": "ptinpoly", @@ -97343,7 +98375,7 @@ "name": "ptools", "version": "2.0.0", "sha256": "12k47f2nwf5r0d4r1n3qksdsd1gk3ax519hqz6803hynwlcqx2a3", - "depends": ["igraph", "partitions", "RANN", "raster", "sf", "sp", "spatstat_geom", "spatstat_utils"] + "depends": ["RANN", "igraph", "partitions", "raster", "sf", "sp", "spatstat_geom", "spatstat_utils"] }, "ptspotter": { "name": "ptspotter", @@ -97383,9 +98415,9 @@ }, "pubh": { "name": "pubh", - "version": "1.3.2", - "sha256": "1a4hmnzg2ghh5785yzw6bj0zr7mvx6kdyynv21pd2m16kx1jm8ia", - "depends": ["car", "dplyr", "emmeans", "Epi", "epiR", "epitools", "ggformula", "ggplot2", "gtsummary", "huxtable", "lmtest", "magrittr", "moonBook", "sandwich", "sjlabelled", "sjmisc", "survival", "tibble", "tidyselect"] + "version": "1.3.7", + "sha256": "16z0icqzcjz28wqjjmgv66v5x4m8kdf6vakqq1ihvghz5dyv1j8c", + "depends": ["Epi", "car", "dplyr", "emmeans", "epiR", "epitools", "ggformula", "ggplot2", "gtsummary", "huxtable", "jtools", "lmtest", "moonBook", "performance", "sandwich", "sjlabelled", "sjmisc", "survival", "tibble", "tidyselect"] }, "public_ctn0094data": { "name": "public.ctn0094data", @@ -97403,19 +98435,19 @@ "name": "publipha", "version": "0.1.2", "sha256": "03fpwxh5fyiq84wvmp5yyvsvqnznxyc4ncffn0nfhdnj5giymqvh", - "depends": ["BH", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "truncnorm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "loo", "rstan", "rstantools", "truncnorm"] }, "pubmed_mineR": { "name": "pubmed.mineR", "version": "1.0.20", "sha256": "0apmdrn5bdis55d73j8xgfvv4x54fplmny5c28y5pwa262kchbid", - "depends": ["boot", "R2HTML", "RCurl", "RJSONIO", "XML"] + "depends": ["R2HTML", "RCurl", "RJSONIO", "XML", "boot"] }, "pubmedR": { "name": "pubmedR", "version": "0.0.3", "sha256": "153br94iqayrvvgzrzx0r3ilcrmnznfdnzk8yaii01s8i1g1wxcd", - "depends": ["rentrez", "XML"] + "depends": ["XML", "rentrez"] }, "pubmedtk": { "name": "pubmedtk", @@ -97427,7 +98459,7 @@ "name": "pubtatordb", "version": "0.1.4", "sha256": "0i5azbf75bwxxzpsr5fc2hh22pbwix00hz9dcdpn5jgp2957f7wx", - "depends": ["assertthat", "DBI", "dplyr", "R_utils", "readr", "RSQLite"] + "depends": ["DBI", "RSQLite", "R_utils", "assertthat", "dplyr", "readr"] }, "pullword": { "name": "pullword", @@ -97457,7 +98489,7 @@ "name": "puniform", "version": "0.2.7", "sha256": "15q5wlcps7387rjz7p1f5kifg1fl5yxxy7gjx6fvspvqwjkjbs4z", - "depends": ["ADGofTest", "metafor", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["ADGofTest", "Rcpp", "RcppArmadillo", "metafor", "numDeriv"] }, "puremoe": { "name": "puremoe", @@ -97469,7 +98501,7 @@ "name": "pureseqtmr", "version": "1.4", "sha256": "105v0ydl458xzgkdas7m8llf0672s9klv816sjl27dy0a3k8163f", - "depends": ["data_table", "devtools", "dplyr", "ggplot2", "Peptides", "plyr", "rappdirs", "Rcpp", "readr", "stringr", "tibble"] + "depends": ["Peptides", "Rcpp", "data_table", "devtools", "dplyr", "ggplot2", "plyr", "rappdirs", "readr", "stringr", "tibble"] }, "purge": { "name": "purge", @@ -97481,7 +98513,7 @@ "name": "purgeR", "version": "1.8.2", "sha256": "0w3mcij7q5aqbs5phiyqprgr3hvs77fnjmbayp2rwn9qm1sx160a", - "depends": ["doSNOW", "foreach", "progress", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "doSNOW", "foreach", "progress"] }, "purging": { "name": "purging", @@ -97499,7 +98531,7 @@ "name": "purrrlyr", "version": "0.0.8", "sha256": "0ql08dka07wi1cxjcn12pxj00j0cm112074l7byj9vmi3rlqynh8", - "depends": ["dplyr", "magrittr", "purrr", "Rcpp"] + "depends": ["Rcpp", "dplyr", "magrittr", "purrr"] }, "pushbar": { "name": "pushbar", @@ -97523,7 +98555,7 @@ "name": "pvLRT", "version": "0.5.1", "sha256": "02w88z752svyk63n288dwnbwlw5v5cla294pzrms361ggs1bdkph", - "depends": ["bit64", "data_table", "ggfittext", "ggplot2", "glue", "magrittr", "progress", "RColorBrewer"] + "depends": ["RColorBrewer", "bit64", "data_table", "ggfittext", "ggplot2", "glue", "magrittr", "progress"] }, "pvaluefunctions": { "name": "pvaluefunctions", @@ -97559,7 +98591,7 @@ "name": "pvda", "version": "0.0.3", "sha256": "0m7lw5wplwv3w7bwcflk6ijw83rv85zdch3flvcnx8slqxzaidrg", - "depends": ["checkmate", "cli", "data_table", "dplyr", "dtplyr", "glue", "purrr", "Rdpack", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Rdpack", "checkmate", "cli", "data_table", "dplyr", "dtplyr", "glue", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "pvldcurve": { "name": "pvldcurve", @@ -97571,7 +98603,7 @@ "name": "pwlmm", "version": "1.1.1", "sha256": "0mqf26mx6bamnasknxj3fwsn60nkwh4h74wbr2950qwz1s320hmz", - "depends": ["lme4", "Matrix", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "lme4"] }, "pwr": { "name": "pwr", @@ -97589,7 +98621,7 @@ "name": "pwr2ppl", "version": "0.5.0", "sha256": "0vq7xw6nlaf3vi3415640752988vjj0cdrpjmpl7fjh0z2m5w758", - "depends": ["afex", "broom", "car", "dplyr", "ez", "lavaan", "lmPerm", "lmtest", "MASS", "MBESS", "nlme", "phia", "pls", "quantreg", "semTools", "tidyr"] + "depends": ["MASS", "MBESS", "afex", "broom", "car", "dplyr", "ez", "lavaan", "lmPerm", "lmtest", "nlme", "phia", "pls", "quantreg", "semTools", "tidyr"] }, "pwrAB": { "name": "pwrAB", @@ -97643,7 +98675,7 @@ "name": "pxR", "version": "0.42.7", "sha256": "05i1cg35hq0z37xnh2qfcp8mnrphadrg7av5d0mcgi9nx6c1w80j", - "depends": ["plyr", "reshape2", "RJSONIO", "stringr"] + "depends": ["RJSONIO", "plyr", "reshape2", "stringr"] }, "pxweb": { "name": "pxweb", @@ -97655,7 +98687,7 @@ "name": "pyMTurkR", "version": "1.1.6", "sha256": "16a16rjm71xlv57lkw0w49cv563pg1b8ihligmacrnv9vmzv0843", - "depends": ["curl", "reticulate", "XML"] + "depends": ["XML", "curl", "reticulate"] }, "pycno": { "name": "pycno", @@ -97689,9 +98721,9 @@ }, "pysparklyr": { "name": "pysparklyr", - "version": "0.1.4", - "sha256": "1qya9v6hh2jrsxihz87yk2sxhyp7mcnjl4invv7n5awq9ljz946l", - "depends": ["cli", "DBI", "dbplyr", "dplyr", "fs", "glue", "httr2", "magrittr", "processx", "purrr", "reticulate", "rlang", "rsconnect", "rstudioapi", "sparklyr", "tidyr", "tidyselect", "vctrs"] + "version": "0.1.5", + "sha256": "1029way7vq02bi6hj78vxfqgq3ccbzyv7b758lv51rjm6fm9ckpr", + "depends": ["DBI", "arrow", "cli", "dbplyr", "dplyr", "fs", "glue", "httr2", "magrittr", "processx", "purrr", "reticulate", "rlang", "rsconnect", "rstudioapi", "sparklyr", "tidyr", "tidyselect", "vctrs"] }, "pzfx": { "name": "pzfx", @@ -97733,13 +98765,13 @@ "name": "qacBase", "version": "1.0.3", "sha256": "0rmxmaaa162w1qrbkcm2fd2rnrp2kqjjh6mpszpv1lpfdaq7p4yq", - "depends": ["crayon", "dplyr", "ggcorrplot", "ggExtra", "ggplot2", "haven", "multcompView", "patchwork", "PMCMRplus", "purrr", "rlang", "tidyr"] + "depends": ["PMCMRplus", "crayon", "dplyr", "ggExtra", "ggcorrplot", "ggplot2", "haven", "multcompView", "patchwork", "purrr", "rlang", "tidyr"] }, "qad": { "name": "qad", "version": "1.0.4", "sha256": "1pvdm6h5zilvrpggvy5qq5lhxxblslkjvjjfdj1f5zaick2hmf3s", - "depends": ["copula", "cowplot", "data_table", "dplyr", "ggExtra", "ggplot2", "Rcpp", "viridis"] + "depends": ["Rcpp", "copula", "cowplot", "data_table", "dplyr", "ggExtra", "ggplot2", "viridis"] }, "qap": { "name": "qap", @@ -97751,13 +98783,13 @@ "name": "qape", "version": "2.1", "sha256": "18ryi0mxpm6rcfqj8dl4rvmkcpkch4yv001lwkbsipdm206704ys", - "depends": ["dplyr", "future_apply", "lme4", "Matrix", "matrixcalc", "mvtnorm", "plyr", "reshape2"] + "depends": ["Matrix", "dplyr", "future_apply", "lme4", "matrixcalc", "mvtnorm", "plyr", "reshape2"] }, "qbld": { "name": "qbld", "version": "1.0.3", "sha256": "0zz2n8f4cn03k80wakfgjhablxhbr8hxj5ydl4m7zlya4kdkl5md", - "depends": ["knitr", "mcmcse", "Rcpp", "RcppArmadillo", "RcppDist", "rmarkdown", "stableGR"] + "depends": ["Rcpp", "RcppArmadillo", "RcppDist", "knitr", "mcmcse", "rmarkdown", "stableGR"] }, "qboxplot": { "name": "qboxplot", @@ -97805,7 +98837,7 @@ "name": "qch", "version": "2.0.0", "sha256": "1d2mcyzfnpmr4pv036crhsc91gypj0jrn6hmd9jcnm49khqc0lan", - "depends": ["copula", "dplyr", "ks", "purrr", "qvalue", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "copula", "dplyr", "ks", "purrr", "qvalue", "stringr"] }, "qcpm": { "name": "qcpm", @@ -97817,7 +98849,7 @@ "name": "qcr", "version": "1.4", "sha256": "14nilw60p2kcabh9w5k8bvdjqx4lm5lj79qiigg3i372byq5gb7r", - "depends": ["fda_usc", "MASS", "mvtnorm", "qcc"] + "depends": ["MASS", "fda_usc", "mvtnorm", "qcc"] }, "qcv": { "name": "qcv", @@ -97829,7 +98861,7 @@ "name": "qdap", "version": "2.4.6", "sha256": "1dr48b0187w003v98qckzi4zxb6r0yi3jh8f6krknv4c4qasfn9n", - "depends": ["chron", "dplyr", "gender", "ggplot2", "gridExtra", "igraph", "NLP", "openNLP", "openxlsx", "plotrix", "qdapDictionaries", "qdapRegex", "qdapTools", "RColorBrewer", "RCurl", "reshape2", "scales", "stringdist", "tidyr", "tm", "venneuler", "wordcloud", "XML"] + "depends": ["NLP", "RColorBrewer", "RCurl", "XML", "chron", "dplyr", "gender", "ggplot2", "gridExtra", "igraph", "openNLP", "openxlsx", "plotrix", "qdapDictionaries", "qdapRegex", "qdapTools", "reshape2", "scales", "stringdist", "tidyr", "tm", "venneuler", "wordcloud"] }, "qdapDictionaries": { "name": "qdapDictionaries", @@ -97847,7 +98879,7 @@ "name": "qdapTools", "version": "1.3.7", "sha256": "1cf42lxzqha2ah0yjl144pch50imfr5rf6g0b59xr5jf9x96dsjp", - "depends": ["chron", "data_table", "RCurl", "XML"] + "depends": ["RCurl", "XML", "chron", "data_table"] }, "qdm": { "name": "qdm", @@ -97865,7 +98897,7 @@ "name": "qfa", "version": "2.1", "sha256": "1cawddpspdwrnc7ysp0v109j3k1lqpl9gyhp0jg5ribfiipyszww", - "depends": ["colorRamps", "doParallel", "fields", "foreach", "MASS", "mgcv", "nlme", "quantreg", "RhpcBLASctl"] + "depends": ["MASS", "RhpcBLASctl", "colorRamps", "doParallel", "fields", "foreach", "mgcv", "nlme", "quantreg"] }, "qfasar": { "name": "qfasar", @@ -97901,19 +98933,19 @@ "name": "qgg", "version": "1.1.2", "sha256": "0195fzcr0xy2dns4jl5kn3nigy989l47syn8iavfdpqb76zsh0a3", - "depends": ["coda", "corpcor", "data_table", "MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "statmod"] + "depends": ["MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "coda", "corpcor", "data_table", "statmod"] }, "qgisprocess": { "name": "qgisprocess", - "version": "0.3.0", - "sha256": "0l7696hl728vcjapsczkj3lvip23b1n22skk6cinwkjb8hyc7h9y", + "version": "0.4.0", + "sha256": "0dshfyfhn9lwr8rx1d0ys0bg6m1y99wma0v07h5r8gz8h7zzm1hb", "depends": ["assertthat", "glue", "jsonlite", "processx", "rappdirs", "rlang", "stringr", "tibble", "vctrs", "withr"] }, "qgraph": { "name": "qgraph", "version": "1.9.8", "sha256": "1m019j5nxc0184p0r2zgdn457g555nxsp2s08maa053nydj1va0l", - "depends": ["abind", "colorspace", "corpcor", "fdrtool", "ggplot2", "glasso", "gtools", "Hmisc", "igraph", "jpeg", "lavaan", "Matrix", "pbapply", "plyr", "png", "psych", "Rcpp", "reshape2"] + "depends": ["Hmisc", "Matrix", "Rcpp", "abind", "colorspace", "corpcor", "fdrtool", "ggplot2", "glasso", "gtools", "igraph", "jpeg", "lavaan", "pbapply", "plyr", "png", "psych", "reshape2"] }, "qgshiny": { "name": "qgshiny", @@ -97961,24 +98993,24 @@ "name": "qlcMatrix", "version": "0.9.8", "sha256": "0d38jb653787s05g8syc9wgaljaifmkviijwz5rzcd881glgs8sv", - "depends": ["docopt", "Matrix", "slam", "sparsesvd"] + "depends": ["Matrix", "docopt", "slam", "sparsesvd"] }, "qlcVisualize": { "name": "qlcVisualize", - "version": "0.3", - "sha256": "0njckbdrvzjlmdxmdygcxh6zc30r0gcna5i8jyr1cibmckcbl96h", - "depends": ["alphahull", "cartogramR", "concaveman", "fields", "geodata", "mapplots", "maps", "MASS", "qlcMatrix", "RSpectra", "seriation", "sf", "sp", "spatstat_geom", "spatstat_random"] + "version": "0.4", + "sha256": "13bznvc1915igbaj5bkc96lzsjpvpbkixs3gqpdgl1nzmakrlpjj", + "depends": ["MASS", "RSpectra", "alphahull", "automap", "cartogramR", "concaveman", "fields", "geodata", "gstat", "mapplots", "maps", "qlcMatrix", "seriation", "sf", "sp", "spatstat_geom", "spatstat_random", "stars"] }, "qlcal": { "name": "qlcal", - "version": "0.0.11", - "sha256": "0r40vjnp8aqsdd6wznaff6awadcm64j0am5nln564zw8g8amwl6l", + "version": "0.0.12", + "sha256": "1q8944agv3wdd1ylssk7p11mms0s3jpy3ai0rnhafdj4spycwgp2", "depends": ["BH", "Rcpp"] }, "qlifetable": { "name": "qlifetable", - "version": "0.0.2-4", - "sha256": "01p5gkadmfw2hc9h1gdg88k2g7rq204km9ncldmpf10vnglpiww0", + "version": "0.0.2-5", + "sha256": "1r1pxj35k5vyvq3gc7nzp7q2zwvvqjzs9xzw3i8pv5sixmaqv47a", "depends": [] }, "qmap": { @@ -97991,7 +99023,7 @@ "name": "qmd", "version": "1.1.2", "sha256": "15y1bivli3jy09l4j37zp327x1nchkg6qm8hs46srcxznh9zb99d", - "depends": ["cowplot", "dplyr", "ggplot2", "qad", "Rcpp"] + "depends": ["Rcpp", "cowplot", "dplyr", "ggplot2", "qad"] }, "qmethod": { "name": "qmethod", @@ -98033,13 +99065,13 @@ "name": "qpdf", "version": "1.3.3", "sha256": "0lzyc1g7q809h047il5nkizv124j13m1zf3j32in0gx7dyz10mj1", - "depends": ["askpass", "curl", "Rcpp"] + "depends": ["Rcpp", "askpass", "curl"] }, "qpmadr": { "name": "qpmadr", "version": "1.1.0-0", "sha256": "0krv3zhr42z2mkkbn2bkglzfxbf06dmd9vnnc3rcyhm1r85n4fbq", - "depends": ["checkmate", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "checkmate"] }, "qqboxplot": { "name": "qqboxplot", @@ -98063,7 +99095,7 @@ "name": "qqplotr", "version": "0.0.6", "sha256": "0kj1m7m04599d3b6227vja02zwq5d2vc0cyz2c7jvki4g3q2knxf", - "depends": ["dplyr", "ggplot2", "MASS", "opdisDownsampling", "qqconf", "robustbase"] + "depends": ["MASS", "dplyr", "ggplot2", "opdisDownsampling", "qqconf", "robustbase"] }, "qqtest": { "name": "qqtest", @@ -98079,14 +99111,14 @@ }, "qrLMM": { "name": "qrLMM", - "version": "2.2", - "sha256": "1y612kqnwqzrg5b7c4fc0al8zxycb6g6bgq747yvkm9kqyhbxszh", + "version": "2.3", + "sha256": "0j42akh84jawjq4dslqcf0yg5k4r6dz8psgv812l4qmrl3s9frnz", "depends": ["ald", "lqr", "mvtnorm", "psych", "quantreg"] }, "qrNLMM": { "name": "qrNLMM", - "version": "3.3", - "sha256": "085xjxgswzfra90s88h0mhpns9fpm9pjpi6y2zcv46a67zfvpn9v", + "version": "3.4", + "sha256": "0kzyk01c20bzglkdapy8gwnvkmrjndakm2lj9svx4lhl80v1jh31", "depends": ["ald", "lqr", "mvtnorm", "progress", "psych", "quantreg"] }, "qra": { @@ -98117,31 +99149,31 @@ "name": "qrencoder", "version": "0.1.0", "sha256": "1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8", - "depends": ["base64enc", "png", "raster", "Rcpp"] + "depends": ["Rcpp", "base64enc", "png", "raster"] }, "qreport": { "name": "qreport", "version": "1.0-1", "sha256": "1d3dlpcf6w4bj6bwmydr3rlnscfdqyad6j2cm1rda7565q7k9iyf", - "depends": ["data_table", "Formula", "ggplot2", "Hmisc", "htmltools", "knitr", "rms", "viridis"] + "depends": ["Formula", "Hmisc", "data_table", "ggplot2", "htmltools", "knitr", "rms", "viridis"] }, "qris": { "name": "qris", "version": "1.1.1", "sha256": "0nx4x4ywgwg55fpv9cr30r09in4rzm6070fm0g88qpvgvrihs9a6", - "depends": ["ggplot2", "nleqslv", "quantreg", "Rcpp", "RcppArmadillo", "stringr", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "nleqslv", "quantreg", "stringr", "survival"] }, "qrjoint": { "name": "qrjoint", "version": "2.0-9", "sha256": "0dvz5adawy143r0ddgrblzac76igwmngnblr6vq57sxlvj1nsm7h", - "depends": ["coda", "kernlab", "Matrix", "quantreg"] + "depends": ["Matrix", "coda", "kernlab", "quantreg"] }, "qrlabelr": { "name": "qrlabelr", "version": "0.2.0", "sha256": "1bv76d3fkficcaqg4kzkkxjq1p24c6hxd25jyfia96nkmxyds44m", - "depends": ["argonDash", "argonR", "assertthat", "bslib", "desplot", "dplyr", "ggplot2", "purrr", "QBMS", "qrencoder", "raster", "reactable", "readxl", "shiny", "shinyBS", "shinycssloaders", "shinyjs", "shinyWidgets", "uuid"] + "depends": ["QBMS", "argonDash", "argonR", "assertthat", "bslib", "desplot", "dplyr", "ggplot2", "purrr", "qrencoder", "raster", "reactable", "readxl", "shiny", "shinyBS", "shinyWidgets", "shinycssloaders", "shinyjs", "uuid"] }, "qrmdata": { "name": "qrmdata", @@ -98159,7 +99191,7 @@ "name": "qrmtools", "version": "0.0-17", "sha256": "1vv9y6mmvqnlimghw3dl873r4l47imwcp2x58yzrn53fa2y7b6mi", - "depends": ["ADGofTest", "lattice", "Quandl", "quantmod", "rugarch", "xts", "zoo"] + "depends": ["ADGofTest", "Quandl", "lattice", "quantmod", "rugarch", "xts", "zoo"] }, "qrng": { "name": "qrng", @@ -98201,19 +99233,19 @@ "name": "qsplines", "version": "1.0.1", "sha256": "0zln3w2qx8ck9631hkq8ig5bc2l55wg5mdp3i0fm9amg8mhzq37i", - "depends": ["BH", "onion", "Rcpp", "shiny"] + "depends": ["BH", "Rcpp", "onion", "shiny"] }, "qspray": { "name": "qspray", - "version": "3.0.0", - "sha256": "1vxs8z6whl5a829nk4cjljl47722nzgi8pl0wfhry1skans6gbkq", - "depends": ["BH", "DescTools", "gmp", "partitions", "purrr", "RationalMatrix", "Rcpp", "RcppArmadillo", "Ryacas"] + "version": "3.1.0", + "sha256": "0i5sq29zdcvdrmzsd0xxrw200q6nhg8b00n2jwya8hq4al9xq2z6", + "depends": ["BH", "DescTools", "RationalMatrix", "Rcpp", "Ryacas", "gmp", "partitions", "purrr"] }, "qst": { "name": "qst", "version": "0.1.2", "sha256": "0f5c4088y9c5fxyy2dyfkp049lnzvys3zyizazxsa82xwkwsbc8a", - "depends": ["DBI", "dbplyr", "dplyr", "magrittr", "RSQLite", "tibble"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "magrittr", "tibble"] }, "qsub": { "name": "qsub", @@ -98225,7 +99257,13 @@ "name": "qte", "version": "1.3.1", "sha256": "1hz3rwsi3w2b1xjigf5s3866djcxdkjz7jwcz0rin22v5h6sql80", - "depends": ["BMisc", "data_table", "formula_tools", "ggplot2", "Hmisc", "pbapply", "quantreg", "texreg"] + "depends": ["BMisc", "Hmisc", "data_table", "formula_tools", "ggplot2", "pbapply", "quantreg", "texreg"] + }, + "qtkit": { + "name": "qtkit", + "version": "1.0.0", + "sha256": "0bplhks1sbhx5h34ijx3xdalgvczl8zg4vi6hh7iyp92wncid1vx", + "depends": ["Matrix", "chromote", "dplyr", "ggplot2", "glue", "gutenbergr", "kableExtra", "knitr", "openai", "purrr", "readr", "rlang", "stringr", "tibble", "tidytext"] }, "qtl": { "name": "qtl", @@ -98237,25 +99275,25 @@ "name": "qtl2", "version": "0.36", "sha256": "0sy4j3f1dw7w7qcp3lsc5mmd8kwa5qaxcl8c4236a8zbzkvvnp5j", - "depends": ["data_table", "jsonlite", "Rcpp", "RcppEigen", "RSQLite", "yaml"] + "depends": ["RSQLite", "Rcpp", "RcppEigen", "data_table", "jsonlite", "yaml"] }, "qtl2convert": { "name": "qtl2convert", "version": "0.30", "sha256": "1rpg74gblh30qy0byxvyhlrimcgx7ml5jn7dxs032my7pa58mspf", - "depends": ["qtl", "qtl2", "Rcpp"] + "depends": ["Rcpp", "qtl", "qtl2"] }, "qtl2fst": { "name": "qtl2fst", - "version": "0.26", - "sha256": "0wpqpmj752pwjgghv7b30r69nc950h5fnsszsj142p7vws7ss8j9", + "version": "0.28", + "sha256": "1dnbnpx1xbm8n7jgczh6fzwnns7biab8x742l8n8knh6zrksqn93", "depends": ["fst", "qtl2"] }, "qtl2ggplot": { "name": "qtl2ggplot", "version": "1.2.4", "sha256": "0ygadcm05fqkpa8j2h6rpcxpd287g2av7qnlwlqp1s86zfxshk96", - "depends": ["assertthat", "dplyr", "ggplot2", "ggrepel", "purrr", "qtl2", "RColorBrewer", "Rcpp", "rlang", "stringr", "tidyr"] + "depends": ["RColorBrewer", "Rcpp", "assertthat", "dplyr", "ggplot2", "ggrepel", "purrr", "qtl2", "rlang", "stringr", "tidyr"] }, "qtl2pattern": { "name": "qtl2pattern", @@ -98267,7 +99305,7 @@ "name": "qtl2pleio", "version": "1.4.3", "sha256": "0az71vgj1gv7rfz0hnc9rysh49ak2pnkvmih5mwmymr4an84c34k", - "depends": ["dplyr", "gemma2", "ggplot2", "magrittr", "MASS", "Rcpp", "RcppEigen", "rlang", "tibble"] + "depends": ["MASS", "Rcpp", "RcppEigen", "dplyr", "gemma2", "ggplot2", "magrittr", "rlang", "tibble"] }, "qtlDesign": { "name": "qtlDesign", @@ -98315,7 +99353,7 @@ "name": "qtlpoly", "version": "0.2.4", "sha256": "1lcfb19akddxljwvgsryjvhks0lqkdg7f1br1l2szd6qyd4mmdvs", - "depends": ["abind", "CompQuadForm", "doParallel", "foreach", "ggplot2", "gtools", "mappoly", "MASS", "Matrix", "mvtnorm", "nlme", "quadprog", "Rcpp", "RcppArmadillo", "RcppProgress", "RLRsim"] + "depends": ["CompQuadForm", "MASS", "Matrix", "RLRsim", "Rcpp", "RcppArmadillo", "RcppProgress", "abind", "doParallel", "foreach", "ggplot2", "gtools", "mappoly", "mvtnorm", "nlme", "quadprog"] }, "qtwAcademic": { "name": "qtwAcademic", @@ -98373,9 +99411,9 @@ }, "quadrupen": { "name": "quadrupen", - "version": "0.2-11", - "sha256": "1gmq6wqf4qaamz33qk1y7003lbbfg34rcr48a3jp7fd3aww0yp9c", - "depends": ["ggplot2", "Matrix", "Rcpp", "RcppArmadillo", "reshape2", "scales"] + "version": "0.2-12", + "sha256": "1h05cywpi83saaqg1m8zb49nxn9ablzb8152yd5rynp877cc636h", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ggplot2", "reshape2", "scales"] }, "quadtree": { "name": "quadtree", @@ -98405,13 +99443,13 @@ "name": "qualpalr", "version": "0.4.4", "sha256": "13mahl7v1sldy35ssmr9k0anhx569g1rv44kgvdw5w5s8dm28512", - "depends": ["assertthat", "randtoolbox", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "assertthat", "randtoolbox"] }, "qualtRics": { "name": "qualtRics", - "version": "3.2.0", - "sha256": "1sxpvi2cyasmq2ywg979l75qg8g9ahzzhxjxi8rnx5qmvzlj7br8", - "depends": ["cli", "dplyr", "fs", "glue", "httr", "jsonlite", "lifecycle", "lubridate", "purrr", "readr", "rlang", "sjlabelled", "stringr", "tibble", "tidyr", "withr"] + "version": "3.2.1", + "sha256": "1f63524a4xwdd2wgv4b8ny24xqc4kgcca7ql9c0v71l7yx6ia06r", + "depends": ["archive", "cli", "dplyr", "fs", "glue", "httr", "jsonlite", "lifecycle", "lubridate", "purrr", "readr", "rlang", "sjlabelled", "stringr", "tibble", "tidyr", "withr"] }, "qualvar": { "name": "qualvar", @@ -98427,39 +99465,39 @@ }, "quantdates": { "name": "quantdates", - "version": "1.0", - "sha256": "1hyds8rwr1yg740aq4w5fqjrwdf3dl4phf8mj8qsgbb7i0wbbf3q", + "version": "2.0.4", + "sha256": "1xlrbxslm4i3cwhzw3xa67vib43gpfclz18hkjbvas5ij68axvap", "depends": ["lubridate"] }, "quantdr": { "name": "quantdr", "version": "1.2.2", "sha256": "0w6jdd6i4wxbk4fp44rmy32mwq9ng63zwamq8zpa1hlfbm5qh4s2", - "depends": ["dr", "KernSmooth", "mvtnorm", "quantreg"] + "depends": ["KernSmooth", "dr", "mvtnorm", "quantreg"] }, "quanteda": { "name": "quanteda", "version": "4.0.2", "sha256": "1s046p3bnf36z2mqh5ijirq7jygqj5clal3r0l3f89gr0466a75j", - "depends": ["fastmatch", "jsonlite", "lifecycle", "magrittr", "Matrix", "Rcpp", "RcppArmadillo", "SnowballC", "stopwords", "stringi", "xml2", "yaml"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "SnowballC", "fastmatch", "jsonlite", "lifecycle", "magrittr", "stopwords", "stringi", "xml2", "yaml"] }, "quanteda_textmodels": { "name": "quanteda.textmodels", "version": "0.9.7", "sha256": "0whzy9hbybxmlzkckhlp6whbbg17vskx9bk40iy02j2z6fw6bqxg", - "depends": ["glmnet", "LiblineaR", "Matrix", "quanteda", "Rcpp", "RcppArmadillo", "RSpectra", "SparseM", "stringi"] + "depends": ["LiblineaR", "Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "SparseM", "glmnet", "quanteda", "stringi"] }, "quanteda_textplots": { "name": "quanteda.textplots", "version": "0.94.4", "sha256": "0adl3dahr51f2sqdr0fng99r87pq4mknlqmhg6nfjx617rni9w2a", - "depends": ["extrafont", "ggplot2", "ggrepel", "igraph", "Matrix", "network", "quanteda", "RColorBrewer", "Rcpp", "sna", "stringi"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "extrafont", "ggplot2", "ggrepel", "igraph", "network", "quanteda", "sna", "stringi"] }, "quanteda_textstats": { "name": "quanteda.textstats", "version": "0.97", "sha256": "0h8fyb8smyyhbfk677a2ldyl6b7sdjl0pzk5bbgz8qymw6yg1zdj", - "depends": ["Matrix", "nsyllable", "proxyC", "quanteda", "Rcpp", "RcppArmadillo", "stringi"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "nsyllable", "proxyC", "quanteda", "stringi"] }, "quantification": { "name": "quantification", @@ -98477,31 +99515,31 @@ "name": "quantilogram", "version": "2.2.1", "sha256": "0gvr93d6jjixcrislym0mna2l3plqhl8adaqiagdvxg4y0adfmf0", - "depends": ["np", "quantreg", "SparseM"] + "depends": ["SparseM", "np", "quantreg"] }, "quantities": { "name": "quantities", - "version": "0.2.1", - "sha256": "15z988jz1kza162qwfbiz90wjm3sc8kfkylwa73nkjifcd9l2ir5", - "depends": ["errors", "Rcpp", "units"] + "version": "0.2.2", + "sha256": "0rybq5q5airh01lp779hmqw448szx0i56sp5fv8aza2hmh6f7gxz", + "depends": ["Rcpp", "errors", "units"] }, "quantkriging": { "name": "quantkriging", "version": "0.1.0", "sha256": "0v6kckgzhgsn3158sc06xszdhmk8sfny10j1qyppxsl2hk89n8jf", - "depends": ["ggplot2", "hetGP", "Matrix", "reshape2"] + "depends": ["Matrix", "ggplot2", "hetGP", "reshape2"] }, "quantmod": { "name": "quantmod", "version": "0.4.26", "sha256": "165vp2ygry8ibcpxjbyfvfrjbv98syln12kkyzci2ygp84r5sv1r", - "depends": ["curl", "jsonlite", "TTR", "xts", "zoo"] + "depends": ["TTR", "curl", "jsonlite", "xts", "zoo"] }, "quantoptr": { "name": "quantoptr", "version": "0.1.3", "sha256": "0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3", - "depends": ["quantreg", "Rdpack", "rgenoud", "stringr"] + "depends": ["Rdpack", "quantreg", "rgenoud", "stringr"] }, "quantreg": { "name": "quantreg", @@ -98513,31 +99551,31 @@ "name": "quantreg.nonpar", "version": "1.0", "sha256": "1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k", - "depends": ["fda", "mnormt", "quantreg", "Rearrangement"] + "depends": ["Rearrangement", "fda", "mnormt", "quantreg"] }, "quantregForest": { "name": "quantregForest", "version": "1.3-7", "sha256": "0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz", - "depends": ["randomForest", "RColorBrewer"] + "depends": ["RColorBrewer", "randomForest"] }, "quantregGrowth": { "name": "quantregGrowth", "version": "1.7-1", "sha256": "07hj5kanas42kj70p03h77j5m9vnvsnsb02r31snai4smbaps4ad", - "depends": ["quantreg", "SparseM"] + "depends": ["SparseM", "quantreg"] }, "quantregRanger": { "name": "quantregRanger", "version": "1.0", "sha256": "1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx", - "depends": ["ranger", "Rcpp"] + "depends": ["Rcpp", "ranger"] }, "quantspec": { "name": "quantspec", - "version": "1.2-3", - "sha256": "0ifwq2jmvxhpijz9yd9hffkff6ixcliaqkp9ispp9k1b8icwi8zn", - "depends": ["abind", "quantreg", "Rcpp", "snowfall", "zoo"] + "version": "1.2-4", + "sha256": "1azwxxn4831fdqfz36mb5bv5ji4das2wh0r6qakrycqj1zjilk6k", + "depends": ["Rcpp", "abind", "quantreg", "snowfall", "zoo"] }, "quarks": { "name": "quarks", @@ -98559,8 +99597,8 @@ }, "quarto": { "name": "quarto", - "version": "1.4", - "sha256": "092v5vbrqb1qbmzf0wv29lrkhcbk4nz8kz8cb27dmhx08ns7zk5c", + "version": "1.4.4", + "sha256": "18403v03hh57fm09csg6jmxh6biih7dgq9sakn0hg6x3kn8vnnaf", "depends": ["cli", "jsonlite", "later", "processx", "rlang", "rmarkdown", "rstudioapi", "yaml"] }, "quaxnat": { @@ -98585,7 +99623,7 @@ "name": "quest", "version": "0.2.0", "sha256": "0a3slzskacp0pj0whnnqysqiclf6fby5x81i4mjdvckidgdyjprf", - "depends": ["abind", "boot", "car", "checkmate", "lavaan", "lme4", "MBESS", "multilevel", "nlme", "plyr", "psych", "str2str"] + "depends": ["MBESS", "abind", "boot", "car", "checkmate", "lavaan", "lme4", "multilevel", "nlme", "plyr", "psych", "str2str"] }, "questionr": { "name": "questionr", @@ -98597,7 +99635,7 @@ "name": "queuecomputer", "version": "1.2.0", "sha256": "0qlcj4rqfkp8qanzwi1p2s7r89x5w6aa8zwkcl7rqapbd4nwayhc", - "depends": ["dplyr", "Rcpp", "RcppArmadillo", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "tidyr"] }, "queueing": { "name": "queueing", @@ -98615,7 +99653,7 @@ "name": "quickPWCR", "version": "1.0", "sha256": "1igxjrmli16lxf07xawkslb8gkas63sdpmxrl07vfwl8yq8n6wwl", - "depends": ["dplyr", "pbmcapply", "Rcpp"] + "depends": ["Rcpp", "dplyr", "pbmcapply"] }, "quickPlot": { "name": "quickPlot", @@ -98631,8 +99669,8 @@ }, "quickblock": { "name": "quickblock", - "version": "0.2.1", - "sha256": "1pl3cwb4byz3b4s08rahk20ckkwrl977qr4a7cw0pd09qm0qgcq3", + "version": "0.2.2", + "sha256": "0xlx6g73qxrijxmjzbw980abvk60rvkm847b5in1izwf5fiv7m0p", "depends": ["distances", "scclust"] }, "quickcheck": { @@ -98643,21 +99681,21 @@ }, "quickcode": { "name": "quickcode", - "version": "0.8", - "sha256": "04v95f8ppxqiyqi42z8lrgcygdfc9vb3zk30824jh83vwba9h2y8", - "depends": ["fitdistrplus", "Polychrome", "rstudioapi"] + "version": "0.9.1", + "sha256": "0q9pmnwxrhkf4x78wgfdz3ysahfg4yn51m2ljsk4nf4zvhgdi1yr", + "depends": ["Polychrome", "fitdistrplus", "rstudioapi"] }, "quickmatch": { "name": "quickmatch", - "version": "0.2.2", - "sha256": "0y1yss83q4mpdb5ipldg2080vrnc5725452zrs89gxnsykx1qv6j", + "version": "0.2.3", + "sha256": "1r369153zfxy7xzwzixigpz6ai6avmc5kvcqrf7nvr210xbs72r1", "depends": ["distances", "sandwich", "scclust"] }, "quickpsy": { "name": "quickpsy", "version": "0.1.5.1", "sha256": "0dfqlpghnw79idw3ir03cxx9n88sqs5p14jz7jgpkdwvjpw1y4q9", - "depends": ["DEoptim", "dplyr", "ggplot2", "MPDiR"] + "depends": ["DEoptim", "MPDiR", "dplyr", "ggplot2"] }, "quickregression": { "name": "quickregression", @@ -98669,7 +99707,7 @@ "name": "quid", "version": "0.0.1", "sha256": "10qfby1w3q3z0vwqk3nnxxlf62cr5v60ipagx0wb79vanl318pp0", - "depends": ["BayesFactor", "checkmate", "dplyr", "ellipsis", "ggplot2", "janitor", "magrittr", "Matrix", "MCMCpack", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["BayesFactor", "MCMCpack", "Matrix", "checkmate", "dplyr", "ellipsis", "ggplot2", "janitor", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "quiddich": { "name": "quiddich", @@ -98735,7 +99773,7 @@ "name": "qwraps2", "version": "0.6.0", "sha256": "06i3h6ydjfvy7qrhzznsb272r843fgvykfsgaviq83gi8k5c5i00", - "depends": ["ggplot2", "knitr", "Rcpp", "RcppArmadillo", "xfun"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "knitr", "xfun"] }, "r_blip": { "name": "r.blip", @@ -98763,8 +99801,8 @@ }, "r2country": { "name": "r2country", - "version": "2.0.2.3.1", - "sha256": "02xz9an51qd3b92s8fask5rgmv227di21yv6xzgkz9ccabp12lq7", + "version": "2.0.2.4.0", + "sha256": "1a98zq4xyni0lx7x2vhnwill9d5c0f17l49ashpj2mh81y76c1s7", "depends": ["quickcode"] }, "r2d2": { @@ -98793,14 +99831,14 @@ }, "r2dii_data": { "name": "r2dii.data", - "version": "0.5.0", - "sha256": "1f8gvian0l3wsw9bwyxzlwv0qpw4mz1qq4747hjm8d4jr37hi0r6", + "version": "0.6.0", + "sha256": "160mzbb9j2hvhf60k236nli899rz2ghfnwc7wzb18bfffhsj1ysx", "depends": ["lifecycle"] }, "r2dii_match": { "name": "r2dii.match", - "version": "0.2.0", - "sha256": "12h7bn4dha4fiplwm7az4fyaa8cdkn3b4j3ndmwr6c2r11gfwy0n", + "version": "0.2.1", + "sha256": "1f2r5f0p851yhjb81gam7spai46bbrrj2y1g89p0s1kjcpnz6ixz", "depends": ["data_table", "dplyr", "glue", "lifecycle", "magrittr", "purrr", "r2dii_data", "rlang", "stringdist", "stringi", "tibble", "tidyr", "tidyselect"] }, "r2dii_plot": { @@ -98819,7 +99857,7 @@ "name": "r2glmm", "version": "0.1.2", "sha256": "0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy", - "depends": ["afex", "data_table", "dplyr", "ggplot2", "gridExtra", "lmerTest", "MASS", "Matrix", "mgcv", "pbkrtest"] + "depends": ["MASS", "Matrix", "afex", "data_table", "dplyr", "ggplot2", "gridExtra", "lmerTest", "mgcv", "pbkrtest"] }, "r2mlm": { "name": "r2mlm", @@ -98829,8 +99867,8 @@ }, "r2pmml": { "name": "r2pmml", - "version": "0.27.1", - "sha256": "1liixrwrr23k96rkl3ijfcvxmfh43ffj8y7qr2zr50c1ampipnkr", + "version": "0.28.0", + "sha256": "110hr4cj4xlm050hmhag0v32jw6g5ka2ws0jibjw58zm4fg3c0x0", "depends": [] }, "r2pptx": { @@ -98853,9 +99891,9 @@ }, "r2resize": { "name": "r2resize", - "version": "1.9", - "sha256": "19dsc3ljvgi8f4na71gbkz7fgq63y7vvwknzbwfrgz2ygpd0vyqg", - "depends": ["DT", "htmltools", "nextGenShinyApps", "quickcode", "shiny"] + "version": "1.9.1", + "sha256": "1s5mkgrq66kbwh8vm2dnbhn801b44ym3vr98nvv9bn81cbn4ifaf", + "depends": ["DT", "htmltools", "quickcode", "shiny"] }, "r2rtf": { "name": "r2rtf", @@ -98871,8 +99909,8 @@ }, "r2social": { "name": "r2social", - "version": "1.2", - "sha256": "0lwdjbb99zab94nkbdw6ilkz3rvgv6lkrgcvb1z24midiykwfmfs", + "version": "1.2.1", + "sha256": "19q4sndbz5hxvkqy7w9s33l03jv26n4sp6vmcpb08ifxrxjxjsca", "depends": ["htmltools", "quickcode", "shiny"] }, "r2spss": { @@ -98889,8 +99927,8 @@ }, "r2sundials": { "name": "r2sundials", - "version": "6.5.0-4", - "sha256": "03ibv93yh7idjrrrkjdbpsi4pnb3rjd48qdlqa89w0wn99lf5qqd", + "version": "6.5.0-5", + "sha256": "0zbaqfml3f778zip3aggy17l1wzn26z41bzx9mk0wbgzx2mi0dwf", "depends": ["Rcpp", "RcppArmadillo", "rmumps"] }, "r2symbols": { @@ -98899,6 +99937,12 @@ "sha256": "18q4jlc6agbpryv34bjjx49srq57m3731g13rcfdidk32kfgj7l7", "depends": ["htmltools", "jsonlite"] }, + "r311": { + "name": "r311", + "version": "0.3.7", + "sha256": "1gnyccin2f6wg7g2knnzsckkf3wrfb6xrkw8cg2z9db61nxacdrq", + "depends": ["curl", "jsonlite"] + }, "r3PG": { "name": "r3PG", "version": "0.1.6", @@ -98919,8 +99963,8 @@ }, "r4ds_tutorials": { "name": "r4ds.tutorials", - "version": "0.2.0", - "sha256": "0cb8fp65ys1cmxx9zrna8cnj72yind05l70b7gbgqgaaaahd7rjp", + "version": "0.3.0", + "sha256": "05wy99n3i43wgzpqd4gsj1skz1jgp2q4q8s99q0ia453xig49shm", "depends": ["tutorial_helpers"] }, "r4googleads": { @@ -98951,7 +99995,7 @@ "name": "r6extended", "version": "0.1.2", "sha256": "1kq1j5rx57053mslj8jx1s0wjvhis7x3y264zw44q4k2x48q9wxs", - "depends": ["digest", "hellno", "magrittr", "R6"] + "depends": ["R6", "digest", "hellno", "magrittr"] }, "r6methods": { "name": "r6methods", @@ -98963,7 +100007,7 @@ "name": "rADA", "version": "1.1.9", "sha256": "0p47nqm8mki03pq5gzc2r5vx4vixs6hpf7am1fvadgi2bn2jrcl2", - "depends": ["car", "dplyr", "e1071", "forestplot", "ggplot2", "gridExtra", "Hmisc", "knitr", "lme4", "lmerTest", "matrixStats", "openxlsx", "reshape2", "stringr", "tidyr"] + "depends": ["Hmisc", "car", "dplyr", "e1071", "forestplot", "ggplot2", "gridExtra", "knitr", "lme4", "lmerTest", "matrixStats", "openxlsx", "reshape2", "stringr", "tidyr"] }, "rARPACK": { "name": "rARPACK", @@ -99017,7 +100061,7 @@ "name": "rBayesianOptimization", "version": "1.2.1", "sha256": "071317r3xbcvkckzvgiac786zi2cy7zbrknscj3r521kaki1rfaf", - "depends": ["data_table", "foreach", "GPfit", "magrittr"] + "depends": ["GPfit", "data_table", "foreach", "magrittr"] }, "rBeta2009": { "name": "rBeta2009", @@ -99035,7 +100079,7 @@ "name": "rCBA", "version": "0.4.3", "sha256": "10rc08gwsf15f4lci8bbgwpwj8n7k1m23hxk633v68g9amla5nvx", - "depends": ["arules", "R_utils", "rJava", "TunePareto"] + "depends": ["R_utils", "TunePareto", "arules", "rJava"] }, "rCMA": { "name": "rCMA", @@ -99047,7 +100091,7 @@ "name": "rCNV", "version": "1.2.0", "sha256": "07c47qz5ma0g9nr0qdsmwhiw1fq3a7r40siavgkhd2in9rb5fzrw", - "depends": ["colorspace", "data_table", "qgraph", "R_utils", "stringr"] + "depends": ["R_utils", "colorspace", "data_table", "qgraph", "stringr"] }, "rChoiceDialogs": { "name": "rChoiceDialogs", @@ -99067,17 +100111,11 @@ "sha256": "0qfmr13bk0gklwj4cv5v3bvwpz831d7yhv7lr42v2j1f0n4db3v4", "depends": ["maxLik", "slam", "truncnorm", "truncreg"] }, - "rDNAse": { - "name": "rDNAse", - "version": "1.1-1", - "sha256": "0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk", - "depends": [] - }, "rDataPipeline": { "name": "rDataPipeline", "version": "0.54.1", "sha256": "0i0vb7gsjshh1wn0lksdma51xdyn6qw54j02cb0xmzcg896gl2p9", - "depends": ["assertthat", "cli", "configr", "dplyr", "git2r", "httr", "jsonlite", "openssl", "R6", "rhdf5", "semver", "usethis", "yaml"] + "depends": ["R6", "assertthat", "cli", "configr", "dplyr", "git2r", "httr", "jsonlite", "openssl", "rhdf5", "semver", "usethis", "yaml"] }, "rDecode": { "name": "rDecode", @@ -99095,13 +100133,13 @@ "name": "rEMM", "version": "1.2.1", "sha256": "13pxw0np8pn895wcb3rxvc0s7ayr968567fx4p2z8gnz2hp7g62j", - "depends": ["cluster", "clusterGeneration", "igraph", "MASS", "proxy", "stream"] + "depends": ["MASS", "cluster", "clusterGeneration", "igraph", "proxy", "stream"] }, "rENA": { "name": "rENA", "version": "0.2.7", "sha256": "136rlzm4pkip0j1zhn4ycsfmq4hjwvhp4d5359wsjkym6lr9n846", - "depends": ["concatenate", "data_table", "doParallel", "foreach", "magrittr", "plotly", "R6", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "concatenate", "data_table", "doParallel", "foreach", "magrittr", "plotly", "scales"] }, "rFSA": { "name": "rFSA", @@ -99143,7 +100181,7 @@ "name": "rIsing", "version": "0.1.0", "sha256": "1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck", - "depends": ["data_table", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "data_table"] }, "rJava": { "name": "rJava", @@ -99155,13 +100193,13 @@ "name": "rKIN", "version": "1.0.2", "sha256": "0dp8m7x5a9glz7yvbv207j3l0226xjxmgf0k2x6rv7zwg9v6y5qk", - "depends": ["dplyr", "ggplot2", "ks", "MASS", "randomcoloR", "RColorBrewer", "sf", "shades"] + "depends": ["MASS", "RColorBrewer", "dplyr", "ggplot2", "ks", "randomcoloR", "sf", "shades"] }, "rKOMICS": { "name": "rKOMICS", "version": "1.3", "sha256": "0v04f9kjdwxdggk3cv29hrnbykz3yq523gxh1kh7vls9xpm6c5wr", - "depends": ["ape", "circlize", "ComplexHeatmap", "dplyr", "factoextra", "FactoMineR", "ggplot2", "ggpubr", "magrittr", "reshape2", "stringr"] + "depends": ["ComplexHeatmap", "FactoMineR", "ape", "circlize", "dplyr", "factoextra", "ggplot2", "ggpubr", "magrittr", "reshape2", "stringr"] }, "rKenyaForex": { "name": "rKenyaForex", @@ -99209,7 +100247,7 @@ "name": "rMIDAS", "version": "1.0.0", "sha256": "18z9fkbvyz290qcv0nmsrk8hchr5niwmhaj7gx3gh7m1ldw53asw", - "depends": ["data_table", "mltools", "rappdirs", "Rdpack", "reticulate"] + "depends": ["Rdpack", "data_table", "mltools", "rappdirs", "reticulate"] }, "rMOST": { "name": "rMOST", @@ -99227,31 +100265,31 @@ "name": "rMVP", "version": "1.0.8", "sha256": "1k7n8hmwybbp41iqgckkvzqa75kl0ikl5mpq2c5ynmlfkr244by8", - "depends": ["BH", "bigmemory", "MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "bigmemory"] }, "rMultiNet": { "name": "rMultiNet", "version": "0.1", "sha256": "0r4zdh91f87xzjr85i8iafghpi60hlmjp763nm025n4h33qvvrfl", - "depends": ["dbscan", "geigen", "glmnet", "Matrix", "plotly", "rTensor"] + "depends": ["Matrix", "dbscan", "geigen", "glmnet", "plotly", "rTensor"] }, "rNOMADS": { "name": "rNOMADS", "version": "2.5.3", "sha256": "196iwdwin73kva9jrjjzx9kgl91h7a3d04p9i3r1rzp3v9xj4gpp", - "depends": ["fields", "GEOmap", "httr", "MBA", "rvest", "stringr", "uuid", "XML"] + "depends": ["GEOmap", "MBA", "XML", "fields", "httr", "rvest", "stringr", "uuid"] }, "rNeighborGWAS": { "name": "rNeighborGWAS", "version": "1.2.4", "sha256": "1j2rafli0ns34ms5s8zjxwyvlxhl88r5krw0qqzc3igd9sc0mjvn", - "depends": ["gaston", "Matrix", "RcppParallel"] + "depends": ["Matrix", "RcppParallel", "gaston"] }, "rNeighborQTL": { "name": "rNeighborQTL", "version": "1.1.2", "sha256": "1balbky8jyvyn2v56dvx7b80gpys40pfslqrsv25sywmp0cqy68p", - "depends": ["gaston", "Matrix", "qtl"] + "depends": ["Matrix", "gaston", "qtl"] }, "rODE": { "name": "rODE", @@ -99275,7 +100313,7 @@ "name": "rPBK", "version": "0.2.4", "sha256": "0sbnxhbv7gi1y1in96cw875sgbr54w5i43al2ivwj6kkdds0i91i", - "depends": ["BH", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "rstan", "rstantools"] }, "rPDBapi": { "name": "rPDBapi", @@ -99293,7 +100331,7 @@ "name": "rPanglaoDB", "version": "0.2.1", "sha256": "1ykzih3idgp2yhbw4039hhhzv0nmrmn3wx2c4dxmgp5qzhrg42nf", - "depends": ["Matrix", "pbapply", "Seurat", "XML", "xml2"] + "depends": ["Matrix", "Seurat", "XML", "pbapply", "xml2"] }, "rPowerSampleSize": { "name": "rPowerSampleSize", @@ -99311,7 +100349,7 @@ "name": "rPref", "version": "1.4.0", "sha256": "1ylb4mc5fjvmi8wly9w4v25l7sc8i9hk28lfidgzaavp5447af2w", - "depends": ["dplyr", "igraph", "lazyeval", "Rcpp", "RcppParallel"] + "depends": ["Rcpp", "RcppParallel", "dplyr", "igraph", "lazyeval"] }, "rQCC": { "name": "rQCC", @@ -99329,7 +100367,7 @@ "name": "rRAP", "version": "1.1", "sha256": "1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb", - "depends": ["lars", "lassoshooting", "MASS"] + "depends": ["MASS", "lars", "lassoshooting"] }, "rSAFE": { "name": "rSAFE", @@ -99365,7 +100403,7 @@ "name": "rSHAPE", "version": "0.3.2", "sha256": "0z6dizsxlkmaymbd24b1m1i8kmndcf21nxxnyfzq6gvdii7bal4h", - "depends": ["abind", "DBI", "doParallel", "evd", "foreach", "RSQLite", "sn", "VGAM"] + "depends": ["DBI", "RSQLite", "VGAM", "abind", "doParallel", "evd", "foreach", "sn"] }, "rSPARCS": { "name": "rSPARCS", @@ -99377,25 +100415,25 @@ "name": "rSPDE", "version": "2.3.3", "sha256": "1l03rd8knh9mws1fbagspvpyli1sdgijslc0axwwbfjqxcpqg6yq", - "depends": ["broom", "fmesher", "lifecycle", "Matrix"] + "depends": ["Matrix", "broom", "fmesher", "lifecycle"] }, "rSRD": { "name": "rSRD", "version": "0.1.7", "sha256": "1srvv49xxkq2nx7fvbn3d2hr4v6ypkxgz6ms1l89zgd0ypdgmypa", - "depends": ["dplyr", "ggplot2", "ggrepel", "gplots", "janitor", "Rcpp", "rlang", "stringr", "tibble"] + "depends": ["Rcpp", "dplyr", "ggplot2", "ggrepel", "gplots", "janitor", "rlang", "stringr", "tibble"] }, "rSpectral": { "name": "rSpectral", "version": "1.0.0.10", "sha256": "12fgyjlk4a6gm2ccjw4mh47ccln2i7iklqammmk8y20i3hd3mh6x", - "depends": ["graph", "igraph", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "graph", "igraph"] }, "rStrava": { "name": "rStrava", "version": "1.3.1", "sha256": "1kn2x208iyz235zf64r2wz4jqgas5srzzjf6gpckqh8dkc6s234f", - "depends": ["dplyr", "geosphere", "ggplot2", "ggspatial", "googleway", "httr", "magrittr", "maptiles", "purrr", "RCurl", "rvest", "tibble", "tidyr", "tidyterra", "XML", "xml2"] + "depends": ["RCurl", "XML", "dplyr", "geosphere", "ggplot2", "ggspatial", "googleway", "httr", "magrittr", "maptiles", "purrr", "rvest", "tibble", "tidyr", "tidyterra", "xml2"] }, "rTCRBCRr": { "name": "rTCRBCRr", @@ -99405,8 +100443,8 @@ }, "rTG": { "name": "rTG", - "version": "1.0.2", - "sha256": "1zg8ly42z7dy2b7iaggfc1wgf7hw2fsaj0ixbf5kw0gqmf7gxzss", + "version": "1.0.3", + "sha256": "00kdibqi54f6f3zjmmmjyrxh3kg91qvzi5pzwapx86fij8x188jb", "depends": ["brnn", "dplyr", "ggplot2", "knitr", "magrittr", "mgcv", "minpack_lm"] }, "rTLsDeep": { @@ -99449,7 +100487,7 @@ "name": "rTensor2", "version": "2.0.0", "sha256": "0bangmph2hmk50gx21dkky0b22aimh168bndbp7a0s5vg2m49ijz", - "depends": ["gsignal", "Matrix", "matrixcalc", "png", "raster", "rTensor", "wavethresh"] + "depends": ["Matrix", "gsignal", "matrixcalc", "png", "rTensor", "raster", "wavethresh"] }, "rTephra": { "name": "rTephra", @@ -99467,7 +100505,7 @@ "name": "rTwig", "version": "1.0.2", "sha256": "1d3h4ym2vrlp04arjxg4s8zd9d5kyxf6ibvv169calsvkd4rfcn7", - "depends": ["cobs", "colourvalues", "data_table", "DescTools", "doFuture", "foreach", "future", "igraph", "kit", "Matrix", "Morpho", "progressr", "purrr", "R_matlab", "randomcoloR", "Rdpack", "rgl", "rmatio", "tidytable"] + "depends": ["DescTools", "Matrix", "Morpho", "R_matlab", "Rdpack", "cobs", "colourvalues", "data_table", "doFuture", "foreach", "future", "igraph", "kit", "progressr", "purrr", "randomcoloR", "rgl", "rmatio", "tidytable"] }, "rUM": { "name": "rUM", @@ -99479,19 +100517,19 @@ "name": "rWCVP", "version": "1.2.4", "sha256": "1qs3h66m2nw44iry5jlczwd00s79669vrk8k1crdh7vgvhnf5r4y", - "depends": ["cli", "dplyr", "ggplot2", "gt", "htmltools", "magrittr", "phonics", "purrr", "RecordLinkage", "rlang", "rmarkdown", "sf", "stringr", "tibble", "tidyr", "withr"] + "depends": ["RecordLinkage", "cli", "dplyr", "ggplot2", "gt", "htmltools", "magrittr", "phonics", "purrr", "rlang", "rmarkdown", "sf", "stringr", "tibble", "tidyr", "withr"] }, "rWishart": { "name": "rWishart", "version": "0.1.2", "sha256": "0wzijc454mrvmggb7a5jqwjbmk0kzr4bmy0iwniz5cn343pr1rri", - "depends": ["lazyeval", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "lazyeval"] }, "rYoutheria": { "name": "rYoutheria", "version": "1.0.3", "sha256": "07l7xn0csy95hvviyn6p0h2ybh36cqrm5lz60dphwsq3ahf7sw68", - "depends": ["plyr", "RCurl", "reshape2", "RJSONIO"] + "depends": ["RCurl", "RJSONIO", "plyr", "reshape2"] }, "ra4bayesmeta": { "name": "ra4bayesmeta", @@ -99507,15 +100545,15 @@ }, "racademyocean": { "name": "racademyocean", - "version": "0.3.2", - "sha256": "0p16xwlm67rvbla6mnky6yv5aa2r61v645jlwhg0zn2dyc8xpajk", + "version": "0.3.3", + "sha256": "14dj4vizs8yvmmf5ny5d0cz7g42ncrk2aibb139vkd69h2a3xaax", "depends": ["cli", "dplyr", "httr2", "pbapply", "purrr", "rappdirs", "retry", "rlang", "stringr", "tidyr", "withr"] }, "raceland": { "name": "raceland", "version": "1.2.1", "sha256": "0kkl12amzaff6y4bj1c62p1clkvxlfm8d20i6d09x35hkkxblnjk", - "depends": ["comat", "plotwidgets", "Rcpp", "RcppArmadillo", "sf", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "comat", "plotwidgets", "sf", "terra"] }, "racir": { "name": "racir", @@ -99563,7 +100601,7 @@ "name": "radiant.data", "version": "1.6.6", "sha256": "09cbd21bvj4a3n5r1ch638y5dgi7xmmg1y62i6ixcjhbr8wypjmn", - "depends": ["arrow", "base64enc", "broom", "bslib", "car", "curl", "dplyr", "DT", "ggplot2", "glue", "jsonlite", "knitr", "lubridate", "magrittr", "markdown", "MASS", "patchwork", "plotly", "png", "psych", "r_import", "randomizr", "readr", "readxl", "rlang", "rmarkdown", "rstudioapi", "scales", "shiny", "shinyAce", "shinyFiles", "stringi", "tibble", "tidyr", "writexl"] + "depends": ["DT", "MASS", "arrow", "base64enc", "broom", "bslib", "car", "curl", "dplyr", "ggplot2", "glue", "jsonlite", "knitr", "lubridate", "magrittr", "markdown", "patchwork", "plotly", "png", "psych", "r_import", "randomizr", "readr", "readxl", "rlang", "rmarkdown", "rstudioapi", "scales", "shiny", "shinyAce", "shinyFiles", "stringi", "tibble", "tidyr", "writexl"] }, "radiant_design": { "name": "radiant.design", @@ -99575,13 +100613,13 @@ "name": "radiant.model", "version": "1.6.6", "sha256": "0y1qvngicw279m9065pr6kj2yp80iz88bf4jqj1dawjvcbrl27wv", - "depends": ["broom", "car", "data_tree", "DiagrammeR", "dplyr", "e1071", "ggplot2", "ggrepel", "lubridate", "magrittr", "NeuralNetTools", "nnet", "patchwork", "pdp", "psych", "r_import", "radiant_basics", "radiant_data", "ranger", "rlang", "rpart", "sandwich", "scales", "shiny", "stringi", "stringr", "tidyr", "tidyselect", "vip", "xgboost", "yaml"] + "depends": ["DiagrammeR", "NeuralNetTools", "broom", "car", "data_tree", "dplyr", "e1071", "ggplot2", "ggrepel", "lubridate", "magrittr", "nnet", "patchwork", "pdp", "psych", "r_import", "radiant_basics", "radiant_data", "ranger", "rlang", "rpart", "sandwich", "scales", "shiny", "stringi", "stringr", "tidyr", "tidyselect", "vip", "xgboost", "yaml"] }, "radiant_multivariate": { "name": "radiant.multivariate", "version": "1.6.6", "sha256": "02nviya2i45xpgnjsldpm5hvy30nh5z1nb6yk5wrps3hl044lqgi", - "depends": ["car", "clustMixType", "dplyr", "ggplot2", "ggrepel", "gower", "GPArotation", "lubridate", "magrittr", "MASS", "patchwork", "polycor", "psych", "r_import", "radiant_data", "radiant_model", "rlang", "scales", "shiny"] + "depends": ["GPArotation", "MASS", "car", "clustMixType", "dplyr", "ggplot2", "ggrepel", "gower", "lubridate", "magrittr", "patchwork", "polycor", "psych", "r_import", "radiant_data", "radiant_model", "rlang", "scales", "shiny"] }, "radir": { "name": "radir", @@ -99605,7 +100643,7 @@ "name": "radsafer", "version": "2.3.0", "sha256": "0zw0dn8pi1yn786fcmm414dap77wdni43dma2pyjbxb15zagpmli", - "depends": ["dplyr", "ggplot2", "ggthemes", "lifecycle", "magrittr", "RadData", "readr", "rlang", "scatterplot3d", "stringr"] + "depends": ["RadData", "dplyr", "ggplot2", "ggthemes", "lifecycle", "magrittr", "readr", "rlang", "scatterplot3d", "stringr"] }, "rafalib": { "name": "rafalib", @@ -99623,7 +100661,7 @@ "name": "rags2ridges", "version": "2.2.7", "sha256": "09dp04y8wl7cws5y94k9j2rlrmm2ci1lk8y77cb17lxr0i1yv6gb", - "depends": ["expm", "fdrtool", "ggplot2", "graph", "gRbase", "Hmisc", "igraph", "RBGL", "Rcpp", "RcppArmadillo", "reshape", "RSpectra", "sfsmisc", "snowfall"] + "depends": ["Hmisc", "RBGL", "RSpectra", "Rcpp", "RcppArmadillo", "expm", "fdrtool", "gRbase", "ggplot2", "graph", "igraph", "reshape", "sfsmisc", "snowfall"] }, "ragtop": { "name": "ragtop", @@ -99641,7 +100679,7 @@ "name": "rainbow", "version": "3.8", "sha256": "0gc25napmcgg1qr17z4zixzxcdiv9midi1x5fin4pzkhicl5d97c", - "depends": ["cluster", "colorspace", "hdrcde", "ks", "MASS", "pcaPP"] + "depends": ["MASS", "cluster", "colorspace", "hdrcde", "ks", "pcaPP"] }, "raincin": { "name": "raincin", @@ -99653,7 +100691,7 @@ "name": "rainette", "version": "0.3.1.1", "sha256": "1x6929rsav80x7ihy7572pqbvdf2hhnb0wp28mvyfvzj9ivqcx8w", - "depends": ["dendextend", "dplyr", "ggplot2", "ggwordcloud", "gridExtra", "highr", "miniUI", "progressr", "purrr", "quanteda", "quanteda_textstats", "Rcpp", "rlang", "RSpectra", "shiny", "stringr", "tidyr"] + "depends": ["RSpectra", "Rcpp", "dendextend", "dplyr", "ggplot2", "ggwordcloud", "gridExtra", "highr", "miniUI", "progressr", "purrr", "quanteda", "quanteda_textstats", "rlang", "shiny", "stringr", "tidyr"] }, "rainfarmr": { "name": "rainfarmr", @@ -99713,7 +100751,7 @@ "name": "ramps", "version": "0.6.18", "sha256": "198m5616n6z71a33jkaw22i7y8324vbnwgzblsicdl4wdrdd0h78", - "depends": ["coda", "fields", "maps", "Matrix", "nlme"] + "depends": ["Matrix", "coda", "fields", "maps", "nlme"] }, "ramsvm": { "name": "ramsvm", @@ -99743,7 +100781,7 @@ "name": "randnet", "version": "0.7", "sha256": "1zb2arx63avjlqjpbf37cvix080khkihh6bb0g1h2alv4lbaaaak", - "depends": ["AUC", "data_table", "entropy", "irlba", "Matrix", "mgcv", "nnls", "poweRlaw", "pracma", "RSpectra", "sparseFLMM"] + "depends": ["AUC", "Matrix", "RSpectra", "data_table", "entropy", "irlba", "mgcv", "nnls", "poweRlaw", "pracma", "sparseFLMM"] }, "rando": { "name": "rando", @@ -99767,7 +100805,7 @@ "name": "random.polychor.pa", "version": "1.1.4-5", "sha256": "1a8mnggdmyklxzqid81a88sx6v5jvhfnx5khvy21idsd8pp7pav2", - "depends": ["boot", "MASS", "mvtnorm", "nFactors", "psych", "sfsmisc"] + "depends": ["MASS", "boot", "mvtnorm", "nFactors", "psych", "sfsmisc"] }, "randomForest": { "name": "randomForest", @@ -99779,13 +100817,13 @@ "name": "randomForestExplainer", "version": "0.10.1", "sha256": "1ny8c3vn2zvdx12avwvlm4lp648jigkrkcvnhf5qmj8rh0w069v0", - "depends": ["data_table", "dplyr", "DT", "GGally", "ggplot2", "ggrepel", "randomForest", "ranger", "reshape2", "rmarkdown"] + "depends": ["DT", "GGally", "data_table", "dplyr", "ggplot2", "ggrepel", "randomForest", "ranger", "reshape2", "rmarkdown"] }, "randomForestSRC": { "name": "randomForestSRC", - "version": "3.2.3", - "sha256": "0vsgdpacqfhwd958vn3wmf8lnh3wb74bgq37qzb3c02fbwilz8lc", - "depends": ["data_tree", "DiagrammeR"] + "version": "3.3.1", + "sha256": "0fm8lfmspq796iqpsywnh7c5h2mllwxpihaas9bx1mx366kfxly5", + "depends": ["DiagrammeR", "data_tree"] }, "randomForestVIP": { "name": "randomForestVIP", @@ -99797,13 +100835,13 @@ "name": "randomGLM", "version": "1.10-1", "sha256": "0557dpca39nj1451l28x4xxfr92cf48gy7crlfhnv4k91kglwcnz", - "depends": ["doParallel", "foreach", "geometry", "Hmisc", "MASS", "matrixStats", "survival"] + "depends": ["Hmisc", "MASS", "doParallel", "foreach", "geometry", "matrixStats", "survival"] }, "randomLCA": { "name": "randomLCA", "version": "1.1-3", "sha256": "1hjkglqdr9czjr91iwshcdb0acrlk461x896rca4bzc9jv8in9cy", - "depends": ["boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "lattice", "Matrix", "Rfast"] + "depends": ["Matrix", "Rfast", "boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "lattice"] }, "randomMachines": { "name": "randomMachines", @@ -99821,13 +100859,13 @@ "name": "randomUniformForest", "version": "1.1.6", "sha256": "1qr7c0pkqn2a9knpbc2ch6chwwrvfw1sr5949mkgml36xyv1syv7", - "depends": ["cluster", "doParallel", "foreach", "ggplot2", "iterators", "MASS", "pROC", "Rcpp"] + "depends": ["MASS", "Rcpp", "cluster", "doParallel", "foreach", "ggplot2", "iterators", "pROC"] }, "randomcoloR": { "name": "randomcoloR", "version": "1.1.0.1", "sha256": "0rqh1zrdza12qq7475f77yvryhh4hj0pg25lb8ywrcljgaj53bnb", - "depends": ["cluster", "colorspace", "Rtsne", "scales", "stringr", "V8"] + "depends": ["Rtsne", "V8", "cluster", "colorspace", "scales", "stringr"] }, "randomizationInference": { "name": "randomizationInference", @@ -99845,7 +100883,7 @@ "name": "randomizeR", "version": "3.0.2", "sha256": "00w4h8xamf6wix67g921j0xqma5y6zmzd23vr8k2qa48an9bnkfm", - "depends": ["coin", "dplyr", "ggplot2", "gsDesign", "insight", "magrittr", "mstate", "mvtnorm", "plotrix", "purrr", "PwrGSD", "reshape2", "rlang", "survival"] + "depends": ["PwrGSD", "coin", "dplyr", "ggplot2", "gsDesign", "insight", "magrittr", "mstate", "mvtnorm", "plotrix", "purrr", "reshape2", "rlang", "survival"] }, "randomizr": { "name": "randomizr", @@ -99881,13 +100919,13 @@ "name": "rangeBuilder", "version": "2.1", "sha256": "1r82rmmfwbfl2lxcsnl9xwyr2932jv43cjlvlihi5172irpfgvpw", - "depends": ["alphahull", "pbapply", "Rcpp", "rnaturalearth", "sf", "stringi", "terra", "units"] + "depends": ["Rcpp", "alphahull", "pbapply", "rnaturalearth", "sf", "stringi", "terra", "units"] }, "rangeMapper": { "name": "rangeMapper", "version": "2.0.3", "sha256": "1wasvd3k2c6crl2q27d9q88x21pv66b6h9x3msfdcw0k0h719dzc", - "depends": ["data_table", "DBI", "exactextractr", "future", "future_apply", "glue", "magrittr", "progressr", "raster", "RSQLite", "sf"] + "depends": ["DBI", "RSQLite", "data_table", "exactextractr", "future", "future_apply", "glue", "magrittr", "progressr", "raster", "sf"] }, "rangeModelMetadata": { "name": "rangeModelMetadata", @@ -99901,6 +100939,12 @@ "sha256": "12c52gqqwaaid5b062gad18ir1vala1z3a0z5j4af1xqzlxgk583", "depends": ["Matrix", "Rcpp", "RcppEigen"] }, + "rank": { + "name": "rank", + "version": "0.1.0", + "sha256": "1pbi2s7361v6jzv9574dhcvdryachrw8s25vk2ca5jjvp9yrj2li", + "depends": [] + }, "rankCorr": { "name": "rankCorr", "version": "1.0.1", @@ -99911,7 +100955,7 @@ "name": "rankFD", "version": "0.1.1", "sha256": "0p8kkscjnfssz58gp2kvpvw206vhqi6m1rknzs35l5ajck3gqzrm", - "depends": ["coin", "lattice", "MASS", "multcomp", "mvtnorm"] + "depends": ["MASS", "coin", "lattice", "multcomp", "mvtnorm"] }, "rankICC": { "name": "rankICC", @@ -99923,13 +100967,13 @@ "name": "rankdifferencetest", "version": "2021-11-25", "sha256": "11isc6fjaicyibnbc315036wp7m670ja6kg4xq5s2x72k076v55f", - "depends": ["coin", "modeltools", "Rdpack"] + "depends": ["Rdpack", "coin", "modeltools"] }, "rankdist": { "name": "rankdist", "version": "1.1.4", "sha256": "1xqrkss8d5vv3blqpvrvdczsygphbx259hy9j7w9b2ahssw8cjr5", - "depends": ["hash", "optimx", "permute", "Rcpp"] + "depends": ["Rcpp", "hash", "optimx", "permute"] }, "rankhazard": { "name": "rankhazard", @@ -99959,7 +101003,7 @@ "name": "ranktreeEnsemble", "version": "0.23", "sha256": "09nax4h3jajbkbjkxwd8zd075lkhgcfhh42c2zqwwn8bkdyk03gr", - "depends": ["data_tree", "gbm", "randomForestSRC", "Rcpp"] + "depends": ["Rcpp", "data_tree", "gbm", "randomForestSRC"] }, "rapiclient": { "name": "rapiclient", @@ -99991,6 +101035,12 @@ "sha256": "1dhjsv22rdsv668d8dzdd6pm5xy549iiycv6isjmc5cwj3dp5fyz", "depends": ["openNLPdata", "rJava", "slowraker"] }, + "rapidsplithalf": { + "name": "rapidsplithalf", + "version": "0.3", + "sha256": "1ac7hpvi26gjzwxf6xma0307222aiap9029kpv8w9abpyz7v34jw", + "depends": ["Rcpp", "doParallel", "foreach"] + }, "rapidxmlr": { "name": "rapidxmlr", "version": "0.1.0", @@ -100025,13 +101075,13 @@ "name": "rapsimng", "version": "0.4.4", "sha256": "0nlvagjilzjbnpy7h7k6kc1jlg589g74dak8f5pksin3kch1bbb0", - "depends": ["DBI", "dplyr", "jsonlite", "magrittr", "rlang", "RSQLite", "tibble"] + "depends": ["DBI", "RSQLite", "dplyr", "jsonlite", "magrittr", "rlang", "tibble"] }, "raptr": { "name": "raptr", "version": "1.0.1", "sha256": "01l5047xdjr3hq2d3hfcs7yb27wm0abmx3jxszq9lm4yic9zjr76", - "depends": ["adehabitatHR", "assertthat", "BH", "boot", "ggplot2", "hypervolume", "ks", "Matrix", "mvtnorm", "PBSmapping", "RColorBrewer", "Rcpp", "RcppEigen", "scales", "sf", "shape", "sp", "terra", "withr"] + "depends": ["BH", "Matrix", "PBSmapping", "RColorBrewer", "Rcpp", "RcppEigen", "adehabitatHR", "assertthat", "boot", "ggplot2", "hypervolume", "ks", "mvtnorm", "scales", "sf", "shape", "sp", "terra", "withr"] }, "raqs": { "name": "raqs", @@ -100049,7 +101099,7 @@ "name": "rare", "version": "0.1.1", "sha256": "0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss", - "depends": ["glmnet", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "glmnet"] }, "rareNMtests": { "name": "rareNMtests", @@ -100079,13 +101129,13 @@ "name": "rasclass", "version": "0.2.2", "sha256": "1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50", - "depends": ["car", "e1071", "nnet", "randomForest", "RSNNS"] + "depends": ["RSNNS", "car", "e1071", "nnet", "randomForest"] }, "rassta": { "name": "rassta", "version": "1.0.5", "sha256": "0yia0pwg29fd6hq0f96hdf6k70pj296805a4lgxn4qqwn3gw7006", - "depends": ["cluster", "data_table", "dplyr", "DT", "foreach", "GGally", "ggplot2", "histogram", "KernSmooth", "kohonen", "plotly", "rlang", "scales", "shiny", "stringdist", "stringi", "terra"] + "depends": ["DT", "GGally", "KernSmooth", "cluster", "data_table", "dplyr", "foreach", "ggplot2", "histogram", "kohonen", "plotly", "rlang", "scales", "shiny", "stringdist", "stringi", "terra"] }, "raster": { "name": "raster", @@ -100121,7 +101171,7 @@ "name": "rasterVis", "version": "0.51.6", "sha256": "12cl201gwah0bn14ji4nbygayd77w5fck9zkcikhrda5s0chvgb1", - "depends": ["hexbin", "lattice", "latticeExtra", "raster", "RColorBrewer", "sp", "terra", "viridisLite", "zoo"] + "depends": ["RColorBrewer", "hexbin", "lattice", "latticeExtra", "raster", "sp", "terra", "viridisLite", "zoo"] }, "rasterbc": { "name": "rasterbc", @@ -100169,13 +101219,13 @@ "name": "ratematrix", "version": "1.2.4", "sha256": "0azn52d88m1xxckv4g02vraa9gdr5jmsxqwxwaim90p2s8jy33np", - "depends": ["ape", "coda", "corpcor", "ellipse", "geiger", "MASS", "mvMORPH", "phylolm", "Rcpp", "RcppArmadillo", "readr"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ape", "coda", "corpcor", "ellipse", "geiger", "mvMORPH", "phylolm", "readr"] }, "rater": { "name": "rater", "version": "1.3.1", "sha256": "0ipgjhxn8d9g6yv369hckvq84v8rrw5b230zz24h72dy9s2nyr44", - "depends": ["BH", "ggplot2", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "loo", "rlang", "rstan", "rstantools"] }, "rateratio_test": { "name": "rateratio.test", @@ -100185,8 +101235,8 @@ }, "raters": { "name": "raters", - "version": "2.0.4", - "sha256": "1ypg3inqbn4rkwcmqbcwkiydp7sb2bpfrcfdgd1pfp0k73zbin2s", + "version": "2.1.0", + "sha256": "0pjyg4g8z6ixcypi4sz4asgbafcfg0kchza1fpa65xvjmss681bj", "depends": [] }, "ratesci": { @@ -100197,9 +101247,9 @@ }, "ratioOfQsprays": { "name": "ratioOfQsprays", - "version": "1.0.0", - "sha256": "1xzss28wpyx9c5n504sllnlsjqv6ybiswbn3ws9is03024fzcaa9", - "depends": ["BH", "gmp", "qspray", "Rcpp", "RcppArmadillo", "RcppCGAL", "Ryacas"] + "version": "1.1.0", + "sha256": "1g5xpjqwp8rplz85vrjmy9fjg1vf4gs793immljac8c8pcvxixds", + "depends": ["BH", "Rcpp", "RcppCGAL", "Ryacas", "gmp", "qspray"] }, "rationalfun": { "name": "rationalfun", @@ -100217,7 +101267,7 @@ "name": "rattle", "version": "5.5.1", "sha256": "1nhknpdy2a3szcbylg9cq1c1g9ds5y3m35dbbi6rh8r85777qviy", - "depends": ["bitops", "dplyr", "ggplot2", "magrittr", "rpart_plot", "stringi", "stringr", "tibble", "tidyr", "XML"] + "depends": ["XML", "bitops", "dplyr", "ggplot2", "magrittr", "rpart_plot", "stringi", "stringr", "tibble", "tidyr"] }, "ravelRy": { "name": "ravelRy", @@ -100233,9 +101283,9 @@ }, "ravetools": { "name": "ravetools", - "version": "0.1.6", - "sha256": "1akid3qsjppracvqz6cxwaz1w9v251m0xb534gd2dsfibk1s2jli", - "depends": ["digest", "filearray", "pracma", "R6", "Rcpp", "RcppEigen", "RNiftyReg", "signal", "waveslim"] + "version": "0.1.7", + "sha256": "1y0zpbdyr8izdjdgxma8v226fqacrg0j0ykiivqarkkdq82gvbj5", + "depends": ["R6", "RNiftyReg", "Rcpp", "RcppEigen", "digest", "filearray", "gsignal", "pracma", "waveslim"] }, "raw": { "name": "raw", @@ -100247,7 +101297,7 @@ "name": "rawKS", "version": "0.1.0", "sha256": "1yiw9imhgij49qbm9hk6psb73zngqmxxwnaxq144ydwb7fbk6j0z", - "depends": ["dplyr", "ggplot2", "magrittr", "ROCR", "tidyr"] + "depends": ["ROCR", "dplyr", "ggplot2", "magrittr", "tidyr"] }, "raws_profile": { "name": "raws.profile", @@ -100259,31 +101309,31 @@ "name": "raybevel", "version": "0.1.3", "sha256": "0431mk0lslqwffknarb7zm2nbgv564d3karf9davc7w1xgnf11fj", - "depends": ["BH", "decido", "digest", "progress", "rayvertex", "Rcpp", "RcppCGAL", "RcppThread", "sf"] + "depends": ["BH", "Rcpp", "RcppCGAL", "RcppThread", "decido", "digest", "progress", "rayvertex", "sf"] }, "rayimage": { "name": "rayimage", - "version": "0.10.0", - "sha256": "1ss1l8cbm0p7d413s81ncqhd7dqhyd22v5z1z48s9a56pxm2lw5l", - "depends": ["jpeg", "png", "progress", "Rcpp", "RcppArmadillo"] + "version": "0.11.0", + "sha256": "056j9fbhglkf5hnh7ql99wfzf0qf6rls93wmdlyabpdnssq01nma", + "depends": ["Rcpp", "RcppArmadillo", "jpeg", "png", "progress", "tiff"] }, "raymolecule": { "name": "raymolecule", "version": "0.5.3", "sha256": "0lwjx43wd4ziriqd3rxar14z5497x79nfh3h05kn9b7rsiiv8ir9", - "depends": ["httr", "magrittr", "PeriodicTable", "rayrender", "rayvertex"] + "depends": ["PeriodicTable", "httr", "magrittr", "rayrender", "rayvertex"] }, "rayrender": { "name": "rayrender", - "version": "0.32.2", - "sha256": "1vmxnwr8bf4w8kfizqvbi94p2bh7cnwsl8xcljvf4cslsx2ky8l3", - "depends": ["cli", "decido", "magrittr", "pillar", "png", "progress", "raster", "rayimage", "rayvertex", "Rcpp", "RcppThread", "spacefillr", "vctrs", "withr"] + "version": "0.34.3", + "sha256": "1dcrkd4pncmxvi8n5lzy11amcbrrw7c7h2gxgjsywb180kimvv5g", + "depends": ["Rcpp", "RcppThread", "cli", "decido", "magrittr", "pillar", "png", "progress", "raster", "rayimage", "rayvertex", "spacefillr", "vctrs", "withr"] }, "rayshader": { "name": "rayshader", "version": "0.37.3", "sha256": "10jqh7kpn572a100vm59r2cbqzhhng7r6fjfmyw0n44s9bfw5490", - "depends": ["doParallel", "foreach", "jpeg", "magrittr", "png", "progress", "raster", "rayimage", "rayrender", "rayvertex", "Rcpp", "RcppArmadillo", "rgl", "scales", "terrainmeshr"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "jpeg", "magrittr", "png", "progress", "raster", "rayimage", "rayrender", "rayvertex", "rgl", "scales", "terrainmeshr"] }, "raytracing": { "name": "raytracing", @@ -100293,21 +101343,21 @@ }, "rayvertex": { "name": "rayvertex", - "version": "0.10.4", - "sha256": "16rkin3dq648x1gwi9kdpaamb4zsvp326y84pnbwrivny2g9j7q3", - "depends": ["digest", "png", "rayimage", "Rcpp", "RcppThread", "spacefillr"] + "version": "0.11.4", + "sha256": "0xbhkv77238y742vpci6d2z87n6mnnp80qxv938rwb9hfs4c66j4", + "depends": ["Rcpp", "RcppThread", "cli", "digest", "pillar", "png", "rayimage", "spacefillr", "tibble", "vctrs", "withr"] }, "rb3": { "name": "rb3", - "version": "0.0.10", - "sha256": "1gf4i5fbpx238af5f5bzcfmb763mlyk97aq8335slyc8828b9a9c", - "depends": ["ascii", "base64enc", "bizdays", "cli", "digest", "dplyr", "httr", "jsonlite", "proto", "purrr", "readr", "readxl", "rlang", "rvest", "stringr", "tidyr", "XML", "yaml"] + "version": "0.0.11", + "sha256": "1nxh4a3ihjdm1xp3sam9pqh56q2yic97fssm00g7djdfcxq6y0fy", + "depends": ["XML", "ascii", "base64enc", "bizdays", "cli", "digest", "dplyr", "httr", "jsonlite", "proto", "purrr", "readr", "readxl", "rlang", "rvest", "stringr", "tidyr", "yaml"] }, "rbacon": { "name": "rbacon", "version": "3.2.0", "sha256": "18d0mcfmslycbsi9sgqkxw1xwm9cgq4rxkwrvlbm67g0ryad86l3", - "depends": ["coda", "data_table", "Rcpp", "rintcal"] + "depends": ["Rcpp", "coda", "data_table", "rintcal"] }, "rbbnp": { "name": "rbbnp", @@ -100325,7 +101375,7 @@ "name": "rbcc", "version": "0.1.1", "sha256": "1v99cpbq7wd9kfjfanyxfmxifvnr73882hh0zyrp6n3nvj7l85rz", - "depends": ["ggplot2", "PearsonDS", "pracma", "qcc", "reshape2"] + "depends": ["PearsonDS", "ggplot2", "pracma", "qcc", "reshape2"] }, "rbch": { "name": "rbch", @@ -100337,7 +101387,7 @@ "name": "rbedrock", "version": "0.3.2", "sha256": "0jyc7cikr86927ax3qhniv8injqwndzhr4bhd4yphh2sliv6ci8c", - "depends": ["bit64", "digest", "dplyr", "fs", "magrittr", "purrr", "R6", "rappdirs", "readr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] + "depends": ["R6", "bit64", "digest", "dplyr", "fs", "magrittr", "purrr", "rappdirs", "readr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] }, "rbenchmark": { "name": "rbenchmark", @@ -100361,7 +101411,7 @@ "name": "rbi.helpers", "version": "0.4.0", "sha256": "1qj5b9wwh40ni549l9xiarp7w5x9q5n22k413azjhnssm7799hbv", - "depends": ["data_table", "lubridate", "Matrix", "rbi", "reshape2"] + "depends": ["Matrix", "data_table", "lubridate", "rbi", "reshape2"] }, "rbibutils": { "name": "rbibutils", @@ -100379,7 +101429,7 @@ "name": "rbioacc", "version": "1.2.1", "sha256": "0yz3mlkz6869rlg56m49bl5bq16gnmr69lznlvcsz7vmwli2ic4x", - "depends": ["BH", "GGally", "ggmcmc", "ggplot2", "loo", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "stringr", "zoo"] + "depends": ["BH", "GGally", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggmcmc", "ggplot2", "loo", "rstan", "rstantools", "stringr", "zoo"] }, "rbioapi": { "name": "rbioapi", @@ -100391,7 +101441,7 @@ "name": "rbiom", "version": "1.0.3", "sha256": "13nma1s3p4bzh8mvikrnmkqyyrx9axvxavq6fyk2w0j804w1qzcg", - "depends": ["magrittr", "openxlsx", "plyr", "R_utils", "Rcpp", "RcppParallel", "rjson", "rlang", "slam"] + "depends": ["R_utils", "Rcpp", "RcppParallel", "magrittr", "openxlsx", "plyr", "rjson", "rlang", "slam"] }, "rbiouml": { "name": "rbiouml", @@ -100415,7 +101465,7 @@ "name": "rbmi", "version": "1.2.6", "sha256": "0yy5yz9ld74wvljvpfz4gh7xzq9b60nf9lc97s1zvmwjgrzp77v4", - "depends": ["assertthat", "BH", "Matrix", "mmrm", "pkgload", "R6", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Matrix", "R6", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "assertthat", "mmrm", "pkgload", "rstan", "rstantools"] }, "rbmn": { "name": "rbmn", @@ -100427,7 +101477,7 @@ "name": "rbooster", "version": "1.1.0", "sha256": "0v524hjp3im94hbf6kbmi4xhqnak135mmpmq1sni1c97dqal2hqy", - "depends": ["earth", "Hmisc", "rpart"] + "depends": ["Hmisc", "earth", "rpart"] }, "rbounds": { "name": "rbounds", @@ -100439,7 +101489,7 @@ "name": "rbridge", "version": "1.0.2", "sha256": "0m4c61rdrhq1jw3rwq2ld29g5dchbk4sfpnq0wmwbvzhdjq76plc", - "depends": ["dplyr", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr"] }, "rbscCI": { "name": "rbscCI", @@ -100475,7 +101525,7 @@ "name": "rcaiman", "version": "1.2.2", "sha256": "1zhs56my1229826ilxfdm5vdgw2n8vql3flmj64604fsyjsnv833", - "depends": ["colorspace", "filenamer", "lidR", "magrittr", "pracma", "Rdpack", "spatial", "terra", "testthat"] + "depends": ["Rdpack", "colorspace", "filenamer", "lidR", "magrittr", "pracma", "spatial", "terra", "testthat"] }, "rcarbon": { "name": "rcarbon", @@ -100489,6 +101539,12 @@ "sha256": "0lqipmrcvgjlh7ya4r3vf7qiypc2pwgqcxzmg4xmb5h5p5l37cq0", "depends": ["ggplot2", "scales"] }, + "rcausim": { + "name": "rcausim", + "version": "0.1.1", + "sha256": "1h1ml452xc8m1mzz2y915x9vzyykq6wgfbayabdjk14k2w6n1a0n", + "depends": ["dplyr", "igraph", "magrittr", "purrr", "tidyr"] + }, "rcbalance": { "name": "rcbalance", "version": "1.8.8", @@ -100499,7 +101555,7 @@ "name": "rcbayes", "version": "0.2.0", "sha256": "1qwbpx9snqgaz7gshvyhq9ylsf59grjhx56f7cnq25h2f76km9cc", - "depends": ["BH", "dplyr", "magrittr", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rlang", "rstan", "rstantools", "shiny", "shinythemes", "StanHeaders", "tibble", "tidybayes"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "dplyr", "magrittr", "rlang", "rstan", "rstantools", "shiny", "shinythemes", "tibble", "tidybayes"] }, "rcbsubset": { "name": "rcbsubset", @@ -100517,7 +101573,7 @@ "name": "rcccd", "version": "0.3.2", "sha256": "0wyh4ijiy0mm7alfkz06hnkgya87npxgz33zpaarb3phkkzjhcs2", - "depends": ["proxy", "RANN", "Rcpp", "RcppArmadillo", "Rfast"] + "depends": ["RANN", "Rcpp", "RcppArmadillo", "Rfast", "proxy"] }, "rccola": { "name": "rccola", @@ -100535,7 +101591,7 @@ "name": "rcdk", "version": "3.8.1", "sha256": "15dwjrnw0zdkck56gs2282gw5fvzqimhhjyrryh1rdnvvqsbj9i7", - "depends": ["fingerprint", "iterators", "itertools", "png", "rcdklibs", "rJava"] + "depends": ["fingerprint", "iterators", "itertools", "png", "rJava", "rcdklibs"] }, "rcdklibs": { "name": "rcdklibs", @@ -100559,12 +101615,12 @@ "name": "rchemo", "version": "0.1-2", "sha256": "06wrpv3bnzq9sz6wq4f1sgcq549rafnqh6rzldl160hv7yb7rl80", - "depends": ["data_table", "e1071", "FNN", "signal"] + "depends": ["FNN", "data_table", "e1071", "signal"] }, "rcheology": { "name": "rcheology", - "version": "4.4.0.0", - "sha256": "1iazraakb1jvcjs2ygay1r7f04fpnmsgcgv028bdxj8ck6pqksrq", + "version": "4.4.1.0", + "sha256": "1k49z9czxdksvc7m7767q52l613lv7fsfykx0yaajjlvp67ac4ly", "depends": [] }, "rciplot": { @@ -100589,7 +101645,7 @@ "name": "rcmdcheck", "version": "1.4.0", "sha256": "1l696byn3kjq2xvz4wxybzaj6ink85h4lz3a35v2132ba5yyzm5v", - "depends": ["callr", "cli", "curl", "desc", "digest", "pkgbuild", "prettyunits", "R6", "rprojroot", "sessioninfo", "withr", "xopen"] + "depends": ["R6", "callr", "cli", "curl", "desc", "digest", "pkgbuild", "prettyunits", "rprojroot", "sessioninfo", "withr", "xopen"] }, "rco": { "name": "rco", @@ -100613,7 +101669,7 @@ "name": "rcompanion", "version": "2.4.36", "sha256": "0r6kppwfm44h9y5wda3pfnxgsjvrdj3ysdmxclhrciq5rlzs2n8v", - "depends": ["boot", "coin", "DescTools", "lmtest", "multcompView", "nortest", "plyr"] + "depends": ["DescTools", "boot", "coin", "lmtest", "multcompView", "nortest", "plyr"] }, "rcompendium": { "name": "rcompendium", @@ -100631,12 +101687,12 @@ "name": "rcontroll", "version": "0.1.1", "sha256": "14xh5hhb96qk0f3kvvvjbkyswcq17g6y70v5prazldq7i4bzpv8q", - "depends": ["doParallel", "doSNOW", "dplyr", "foreach", "gganimate", "ggplot2", "iterators", "lidR", "lubridate", "magrittr", "Rcpp", "RcppGSL", "readr", "reshape2", "sys", "terra", "tibble", "tidyr", "viridis", "vroom"] + "depends": ["Rcpp", "RcppGSL", "doParallel", "doSNOW", "dplyr", "foreach", "gganimate", "ggplot2", "iterators", "lidR", "lubridate", "magrittr", "readr", "reshape2", "sys", "terra", "tibble", "tidyr", "viridis", "vroom"] }, "rcorpora": { "name": "rcorpora", - "version": "2.0.0", - "sha256": "1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy", + "version": "2.0.1", + "sha256": "1gwiqp0ysw509pjggiw6czw8yf8lz917gvrnish0wgivc317x268", "depends": ["jsonlite"] }, "rcpptimer": { @@ -100649,13 +101705,13 @@ "name": "rcrimeanalysis", "version": "0.5.0", "sha256": "0a7h3gblc69g1mkalb3yss9x609701zwd3hh4pr2v96fdmsxdpkc", - "depends": ["forecast", "ggmap", "htmltools", "igraph", "KernSmooth", "leaflet", "leafsync", "lubridate", "pals", "raster", "sp", "terra"] + "depends": ["KernSmooth", "forecast", "ggmap", "htmltools", "igraph", "leaflet", "leafsync", "lubridate", "pals", "raster", "sp", "terra"] }, "rcrossref": { "name": "rcrossref", "version": "1.2.0", "sha256": "0hqvhqmfmbhvxv555x3vjwz7rh4r2cw6wj8p3wq4hcf107r555c0", - "depends": ["crul", "dplyr", "DT", "jsonlite", "miniUI", "plyr", "R6", "shiny", "stringr", "tibble", "xml2"] + "depends": ["DT", "R6", "crul", "dplyr", "jsonlite", "miniUI", "plyr", "shiny", "stringr", "tibble", "xml2"] }, "rcssci": { "name": "rcssci", @@ -100701,8 +101757,8 @@ }, "rdataretriever": { "name": "rdataretriever", - "version": "3.1.0", - "sha256": "06jbsrrl4db4w1ksjy7p0ywqba1di3nf491zfpgni8bz3a90ia0w", + "version": "3.1.1", + "sha256": "0ill7bgah219zp33yr9crq4fvzkhjbqm3y5y70nx14zq2jn5v9dg", "depends": ["reticulate", "semver"] }, "rdbnomics": { @@ -100721,7 +101777,7 @@ "name": "rddapp", "version": "1.3.2", "sha256": "1bb76v35cpcvmjnkzficl1rvwkz37z0i56bq81m7nb87cb9p1hkv", - "depends": ["AER", "DT", "Formula", "lmtest", "plot3D", "R_utils", "sandwich", "shiny", "sp"] + "depends": ["AER", "DT", "Formula", "R_utils", "lmtest", "plot3D", "sandwich", "shiny", "sp"] }, "rddensity": { "name": "rddensity", @@ -100739,7 +101795,7 @@ "name": "rddtools", "version": "1.6.0", "sha256": "12lxdpazfhwn5kkzs91qhs0xcky30dj01yp0v5708ahr1ywqdxmd", - "depends": ["AER", "Formula", "ggplot2", "KernSmooth", "lmtest", "locpol", "np", "rdd", "rdrobust", "rmarkdown", "sandwich"] + "depends": ["AER", "Formula", "KernSmooth", "ggplot2", "lmtest", "locpol", "np", "rdd", "rdrobust", "rmarkdown", "sandwich"] }, "rde": { "name": "rde", @@ -100761,21 +101817,21 @@ }, "rdflib": { "name": "rdflib", - "version": "0.2.8", - "sha256": "0massic915hyw2752jkaa3rx9nf2v7a87gp3c5qpyn4fnqjai4dn", + "version": "0.2.9", + "sha256": "0cfkbqr4m9dqbiqnr01wkxl6qd09384aq5x0d8vycylmngvmh4ay", "depends": ["dplyr", "readr", "redland", "stringi", "tidyr"] }, "rdfp": { "name": "rdfp", "version": "0.1.4", "sha256": "1490227hhfjjscfmd8p897v1ijs61pk5sc0a2vr9yjnfmsnxpqrl", - "depends": ["curl", "data_table", "dplyr", "httr", "lubridate", "plyr", "purrr", "readr", "XML", "xml2"] + "depends": ["XML", "curl", "data_table", "dplyr", "httr", "lubridate", "plyr", "purrr", "readr", "xml2"] }, "rdhs": { "name": "rdhs", "version": "0.8.1", "sha256": "0i25lbfbi3ikipk7k53bi1b57v2348ab08sh7rh2pqdlxpfkp7b7", - "depends": ["brio", "cli", "digest", "foreign", "getPass", "haven", "httr", "iotools", "jsonlite", "magrittr", "qdapRegex", "R6", "rappdirs", "rlang", "sf", "storr", "xml2"] + "depends": ["R6", "brio", "cli", "digest", "foreign", "getPass", "haven", "httr", "iotools", "jsonlite", "magrittr", "qdapRegex", "rappdirs", "rlang", "sf", "storr", "xml2"] }, "rdi": { "name": "rdi", @@ -100823,7 +101879,7 @@ "name": "rdomains", "version": "0.2.1", "sha256": "1gpgryfdv4dhv98nfnr15lqq9ndwi8q17rwm5z7j2klgi5d644ld", - "depends": ["aws_alexa", "curl", "devtools", "glmnet", "httr", "jsonlite", "Matrix", "R_utils", "urltools", "virustotal", "XML", "xml2"] + "depends": ["Matrix", "R_utils", "XML", "aws_alexa", "curl", "devtools", "glmnet", "httr", "jsonlite", "urltools", "virustotal", "xml2"] }, "rdoxygen": { "name": "rdoxygen", @@ -100841,13 +101897,13 @@ "name": "rdracor", "version": "1.0.3", "sha256": "014xa4n6av0g3ffplna8z25b00176war3h2pv20wclx9lq8wz9hs", - "depends": ["data_table", "httr", "igraph", "jsonlite", "purrr", "Rdpack", "stringr", "tibble", "tidyr", "xml2"] + "depends": ["Rdpack", "data_table", "httr", "igraph", "jsonlite", "purrr", "stringr", "tibble", "tidyr", "xml2"] }, "rdrobust": { "name": "rdrobust", "version": "2.2", "sha256": "1p9k8gd39090r5ml1sk30k3hvfns2v6laysbaswsn9i2ka70zj42", - "depends": ["ggplot2", "MASS"] + "depends": ["MASS", "ggplot2"] }, "rdryad": { "name": "rdryad", @@ -100859,7 +101915,7 @@ "name": "rdtLite", "version": "1.4", "sha256": "0m2fxwz0h4rriw62g2hp20iw6ddbq5l8n80z9xgxk49n6pfm1ywj", - "depends": ["curl", "digest", "gtools", "jsonlite", "knitr", "provViz", "rlang", "rmarkdown", "sessioninfo", "stringi", "XML"] + "depends": ["XML", "curl", "digest", "gtools", "jsonlite", "knitr", "provViz", "rlang", "rmarkdown", "sessioninfo", "stringi"] }, "rdwd": { "name": "rdwd", @@ -100883,7 +101939,7 @@ "name": "reReg", "version": "1.4.6", "sha256": "1p1rbj88bc5qz909w2q6mnzkscz2djdm8w3lcfj1pzka6699jz8z", - "depends": ["BB", "dfoptim", "directlabels", "ggplot2", "MASS", "nleqslv", "optimx", "Rcpp", "RcppArmadillo", "reda", "rootSolve", "scam", "SQUAREM", "survival"] + "depends": ["BB", "MASS", "Rcpp", "RcppArmadillo", "SQUAREM", "dfoptim", "directlabels", "ggplot2", "nleqslv", "optimx", "reda", "rootSolve", "scam", "survival"] }, "react": { "name": "react", @@ -100899,8 +101955,8 @@ }, "reactR": { "name": "reactR", - "version": "0.5.0", - "sha256": "14pi2wc25qa9q0hp8jby07798l53phyj1zifj46fg2pjq8vkz7p7", + "version": "0.6.0", + "sha256": "0mi9zfy50njvykmp4rfgpvsmf7q8l92n2196jw9sc06q7ybjn92v", "depends": ["htmltools"] }, "reactable": { @@ -100927,12 +101983,6 @@ "sha256": "1njihrnq1x162nc2wk16kj1l0vpvk8xcdgjvj36arw4z8nv8wpah", "depends": ["jsonlite"] }, - "read_dbc": { - "name": "read.dbc", - "version": "1.0.7", - "sha256": "1virjl00x1yzby6wvxjdf1kqbjgm2kkdv53b72c0jq4nrfrl55nw", - "depends": ["foreign"] - }, "read_gb": { "name": "read.gb", "version": "2.2", @@ -100979,13 +102029,13 @@ "name": "readMzXmlData", "version": "2.8.3", "sha256": "1mh6rgy8s0rkvycv99p3zgw831pgzi5cacsj4awb7h4dl11sf8sf", - "depends": ["base64enc", "digest", "XML"] + "depends": ["XML", "base64enc", "digest"] }, "readNSx": { "name": "readNSx", "version": "0.0.4", "sha256": "1mllas238wvmpc094vw242h2gv9qgdyfml9k618ijp1s0mabnwcc", - "depends": ["cpp11", "data_table", "fastmap", "hdf5r", "jsonlite", "R6"] + "depends": ["R6", "cpp11", "data_table", "fastmap", "hdf5r", "jsonlite"] }, "readODS": { "name": "readODS", @@ -101029,6 +102079,12 @@ "sha256": "1sq2spjgdc9rq8cr5i9qjmqd4vcf7cknpx5dndwjdqrv112y8bk9", "depends": ["crayon", "haven", "jsonlite", "readr", "readxl"] }, + "readme2vignette": { + "name": "readme2vignette", + "version": "0.1.0", + "sha256": "1nrcmi5g0fa2jnmaw7kc9zir4nvn64imwz8b2jmhcg7k0nxakybv", + "depends": ["desc", "fs", "glue", "knitr", "pkgbuild", "remotes", "rmarkdown", "usethis", "whisker"] + }, "readmet": { "name": "readmet", "version": "1.7.1", @@ -101045,7 +102101,7 @@ "name": "readmoRe", "version": "0.2-12", "sha256": "18zxhnh8nzh3l5j94mrqf9l94bxvc82nzhl8sx5k9h08gj4f1zfw", - "depends": ["plyr", "R_utils", "readxl", "xml2"] + "depends": ["R_utils", "plyr", "readxl", "xml2"] }, "readobj": { "name": "readobj", @@ -101057,12 +102113,12 @@ "name": "readr", "version": "2.1.5", "sha256": "02p1jjal73j39r49ba4jlvbx8bdqmm96nsdp47igyv54w1gmm9hg", - "depends": ["cli", "clipr", "cpp11", "crayon", "hms", "lifecycle", "R6", "rlang", "tibble", "tzdb", "vroom"] + "depends": ["R6", "cli", "clipr", "cpp11", "crayon", "hms", "lifecycle", "rlang", "tibble", "tzdb", "vroom"] }, "readrba": { "name": "readrba", - "version": "0.1.8", - "sha256": "0hvz8zss5gh7r2w9ar3qh66k7vgbdikz942fp8pbzag8khah5rza", + "version": "0.1.10", + "sha256": "16g1zwib8f4vm4jb8lc9w2rfvszajfrs978gbgdgqz0raw7h4grf", "depends": ["dplyr", "httr", "lubridate", "purrr", "readxl", "rlang", "rvest", "stringr", "tidyr", "xml2"] }, "readroper": { @@ -101111,7 +102167,7 @@ "name": "readwritesqlite", "version": "0.2.0", "sha256": "1p80ghra71j83xrrsqrpqkdaylp4sl1daw1paxw9jpajw679n986", - "depends": ["chk", "crayon", "DBI", "glue", "hms", "lifecycle", "rlang", "RSQLite", "sf", "tibble"] + "depends": ["DBI", "RSQLite", "chk", "crayon", "glue", "hms", "lifecycle", "rlang", "sf", "tibble"] }, "readxl": { "name": "readxl", @@ -101123,19 +102179,19 @@ "name": "readxlsb", "version": "0.1.61", "sha256": "1l7lklfk6ifjq6v4m0ha5k1fxak62zac2yn698r03x41k29382f7", - "depends": ["cellranger", "Rcpp", "xml2"] + "depends": ["Rcpp", "cellranger", "xml2"] }, "ready4": { "name": "ready4", - "version": "0.1.9", - "sha256": "0y7mjsah7a1f8jzz9mf3f9dvqnv30qdn2m4hccw0hyqvwcr1a4pf", - "depends": ["dataverse", "dplyr", "gh", "kableExtra", "lifecycle", "magrittr", "piggyback", "purrr", "rlang", "rvest", "stringi", "stringr", "tibble", "tidyRSS", "tidyselect"] + "version": "0.1.14", + "sha256": "09kf290dq1qdafyx8f12sasf10chiqrh8d1wa1apfkrr01n4b45j", + "depends": ["curl", "dataverse", "dplyr", "gh", "kableExtra", "lifecycle", "magrittr", "piggyback", "purrr", "rlang", "rvest", "stringi", "stringr", "tibble", "tidyRSS", "tidyselect"] }, "realTimeloads": { "name": "realTimeloads", "version": "1.0.0", "sha256": "0ragbi8sczhs8hsbgxl4gmb8lwbmhnxiz88almpml2slsmx7nrrq", - "depends": ["data_table", "imputeTS", "mice", "signal", "TideHarmonics"] + "depends": ["TideHarmonics", "data_table", "imputeTS", "mice", "signal"] }, "realtest": { "name": "realtest", @@ -101153,7 +102209,7 @@ "name": "rearrr", "version": "0.3.4", "sha256": "1inx1gikiqxaf6a8g10b02l1qs2y0zxs2yrxn6dyx9n6xlra3rnr", - "depends": ["checkmate", "dplyr", "lifecycle", "plyr", "purrr", "R6", "rlang", "tibble"] + "depends": ["R6", "checkmate", "dplyr", "lifecycle", "plyr", "purrr", "rlang", "tibble"] }, "reasonabletools": { "name": "reasonabletools", @@ -101175,8 +102231,8 @@ }, "rebmix": { "name": "rebmix", - "version": "2.15.0", - "sha256": "1ikpfsdjwlck9nmx781k0783r94f3ngxixrv1q3w9r7rgk769mx4", + "version": "2.16.0", + "sha256": "12scbgbjyfpskv1lly34r0iwci13pad4g7lgiz7wsph0gynmai13", "depends": [] }, "rebus": { @@ -101211,9 +102267,9 @@ }, "recalibratiNN": { "name": "recalibratiNN", - "version": "0.2.0", - "sha256": "10baqzbwggry9lwydr6vbsx5mx2jpbggm7dxamz9887min8n2lfa", - "depends": ["dplyr", "ggplot2", "glue", "Hmisc", "magrittr", "purrr", "RANN", "Rdpack", "tibble", "tidyr"] + "version": "0.3.0", + "sha256": "1xa70a8w9fi3yq6x1f5jch0ids5zkxq1ij5y5hd124q53bp0q90l", + "depends": ["Hmisc", "RANN", "Rdpack", "dplyr", "ggplot2", "glue", "magrittr", "purrr", "tibble", "tidyr"] }, "recapr": { "name": "recapr", @@ -101231,31 +102287,31 @@ "name": "recexcavAAR", "version": "0.3.0", "sha256": "0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20", - "depends": ["kriging", "Rcpp"] + "depends": ["Rcpp", "kriging"] }, "rechaRge": { "name": "rechaRge", "version": "1.0.0", "sha256": "05in0rv36g282f79b0f3crn1y7azfvw7863n8c583jgvhmvndqsn", - "depends": ["airGR", "data_table", "doFuture", "foreach", "future", "hydrostats", "lubridate", "ncdf4", "plyr", "progressr", "R_utils", "raster", "sp", "zoo"] + "depends": ["R_utils", "airGR", "data_table", "doFuture", "foreach", "future", "hydrostats", "lubridate", "ncdf4", "plyr", "progressr", "raster", "sp", "zoo"] }, "rechonest": { "name": "rechonest", "version": "1.2", "sha256": "0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2", - "depends": ["httr", "jsonlite", "RCurl"] + "depends": ["RCurl", "httr", "jsonlite"] }, "recipes": { "name": "recipes", - "version": "1.0.10", - "sha256": "1m4v9j7by0w5avqljmwck1jsgjgwc8rsby0affa5zii3xkvvvifg", - "depends": ["cli", "clock", "dplyr", "ellipsis", "generics", "glue", "gower", "hardhat", "ipred", "lifecycle", "lubridate", "magrittr", "Matrix", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "timeDate", "vctrs", "withr"] + "version": "1.1.0", + "sha256": "0v9063w4ahdc0xnwry3knykl4k2656df6jxv5f0p40k8piv8ip65", + "depends": ["Matrix", "cli", "clock", "dplyr", "generics", "glue", "gower", "hardhat", "ipred", "lifecycle", "lubridate", "magrittr", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "timeDate", "vctrs", "withr"] }, "reclin2": { "name": "reclin2", "version": "0.5.0", "sha256": "08jf6r74fmsj2bvhz76vf74hphg8543x4wj1dnbsj44xjzh6abi4", - "depends": ["data_table", "lpSolve", "Rcpp", "stringdist"] + "depends": ["Rcpp", "data_table", "lpSolve", "stringdist"] }, "recluster": { "name": "recluster", @@ -101279,7 +102335,7 @@ "name": "recodeflow", "version": "0.1.0", "sha256": "0qi5y1rbdw6dcvkl8gw9fh7rcb0f6ckig8464sgxslgf7cdk2gcz", - "depends": ["dplyr", "haven", "magrittr", "sjlabelled", "stringr", "tidyr", "XML"] + "depends": ["XML", "dplyr", "haven", "magrittr", "sjlabelled", "stringr", "tidyr"] }, "recogito": { "name": "recogito", @@ -101303,13 +102359,13 @@ "name": "recometrics", "version": "0.1.6-3", "sha256": "1i7842k6qw9zbcslfwgdfd7358jh63aybi4mifq6knc8qm577nqk", - "depends": ["float", "Matrix", "MatrixExtra", "Rcpp", "RhpcBLASctl"] + "depends": ["Matrix", "MatrixExtra", "Rcpp", "RhpcBLASctl", "float"] }, "recommenderlab": { "name": "recommenderlab", "version": "1.0.6", "sha256": "1dxpdgmv3hfwix1w8lzc0ijcd8myslsqnznr5pbwsrh7wypwqk1h", - "depends": ["arules", "irlba", "Matrix", "matrixStats", "proxy", "recosystem", "registry"] + "depends": ["Matrix", "arules", "irlba", "matrixStats", "proxy", "recosystem", "registry"] }, "recommenderlabBX": { "name": "recommenderlabBX", @@ -101333,7 +102389,7 @@ "name": "reconstructr", "version": "2.0.4", "sha256": "05nvp19fkmyr2sc7k5qjz2521f8nrzxvjdbnqa148qs0mac84b16", - "depends": ["openssl", "Rcpp"] + "depends": ["Rcpp", "openssl"] }, "recorder": { "name": "recorder", @@ -101345,7 +102401,7 @@ "name": "recosystem", "version": "0.5.1", "sha256": "01d8r1pwvd606cbs9bq2rq3ahq7jnfgak9p58ch4fs4ki5nxf1sj", - "depends": ["float", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "float"] }, "recurrentpseudo": { "name": "recurrentpseudo", @@ -101355,8 +102411,8 @@ }, "recurse": { "name": "recurse", - "version": "1.3.0", - "sha256": "05x2qcabxw0xgirvb39si1j8szrz328fx1f3v8yvdysmfa3bg408", + "version": "1.4.0", + "sha256": "1rv2pa8ghmxdl3s2s16m1xci6v9kjpilyfsmzacmnfgx734c4ihf", "depends": ["Rcpp"] }, "red": { @@ -101369,12 +102425,12 @@ "name": "reda", "version": "0.5.4", "sha256": "1lrfbcvxgbbpi7l3vls3rdj8y3w30gg5f1fjcfscmykvp0i01j3d", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "splines2"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "splines2"] }, "redbookperu": { "name": "redbookperu", - "version": "0.0.2", - "sha256": "0pf6ihk5k4milzz9j2y5wsxj7ishadlx1zvffhkw600c3i7ssi5b", + "version": "0.0.3", + "sha256": "1v90xrvwcfbkgqm6yq0dhsp9i9wfgwv3ijyja70v3bqa46klvq91", "depends": [] }, "redcapAPI": { @@ -101399,13 +102455,19 @@ "name": "redist", "version": "4.2.0", "sha256": "1ibwldd24zj2fhpn18q4381mp82p7wbv61xmqm2lzybil92y800w", - "depends": ["cli", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "patchwork", "Rcpp", "RcppArmadillo", "RcppThread", "redistmetrics", "rlang", "servr", "sf", "stringr", "sys", "tidyselect", "vctrs"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "cli", "doParallel", "doRNG", "dplyr", "foreach", "ggplot2", "patchwork", "redistmetrics", "rlang", "servr", "sf", "stringr", "sys", "tidyselect", "vctrs"] }, "redistmetrics": { "name": "redistmetrics", "version": "1.0.7", "sha256": "0r9fa0p65bpklgcb5nbbsm2s3vhrcbbp4glciglmw185vfjqg7s2", - "depends": ["cli", "doParallel", "dplyr", "foreach", "geos", "magrittr", "Rcpp", "RcppArmadillo", "RcppThread", "rlang", "sf", "vctrs", "wk"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "cli", "doParallel", "dplyr", "foreach", "geos", "magrittr", "rlang", "sf", "vctrs", "wk"] + }, + "redistverse": { + "name": "redistverse", + "version": "0.1.0", + "sha256": "08154l54afih3828xc7zdacj0n3wnahwdq1hjjk3gdyfzl8ad0qy", + "depends": ["PL94171", "alarmdata", "birdie", "censable", "cli", "easycensus", "geomander", "ggredist", "redist", "redistmetrics", "sf", "tinytiger"] }, "redland": { "name": "redland", @@ -101435,7 +102497,7 @@ "name": "ref.ICAR", "version": "2.0.1", "sha256": "1mix12qxap6rqs6dg4nlbm9vlkzxgr1ivkjjkzap3k0km0agldx9", - "depends": ["classInt", "coda", "dplyr", "ggplot2", "gtools", "MCMCglmm", "mvtnorm", "pracma", "Rdpack", "sf", "sp", "spdep"] + "depends": ["MCMCglmm", "Rdpack", "classInt", "coda", "dplyr", "ggplot2", "gtools", "mvtnorm", "pracma", "sf", "sp", "spdep"] }, "refdb": { "name": "refdb", @@ -101453,7 +102515,7 @@ "name": "referenceIntervals", "version": "1.3.1", "sha256": "1vgiy0ds982y9mjnpigzhmckxwj010ymfip2x2gfsqrc320gl2hq", - "depends": ["boot", "extremevalues", "MASS", "outliers"] + "depends": ["MASS", "boot", "extremevalues", "outliers"] }, "refineR": { "name": "refineR", @@ -101471,7 +102533,7 @@ "name": "refitME", "version": "1.2.2", "sha256": "125hxp24vlwg3g0v1rlhi3zbvnnzyj95a6d9f52f98hf6bp05yhb", - "depends": ["caret", "dplyr", "expm", "MASS", "mgcv", "mvtnorm", "sandwich", "scales", "SemiPar", "VGAM", "VGAMdata"] + "depends": ["MASS", "SemiPar", "VGAM", "VGAMdata", "caret", "dplyr", "expm", "mgcv", "mvtnorm", "sandwich", "scales"] }, "reflectR": { "name": "reflectR", @@ -101495,7 +102557,7 @@ "name": "refreg", "version": "0.1.1", "sha256": "0dqlqh3ndpqjab2cz3aikb9srhmyj3j133lwcnajgycwr5334mri", - "depends": ["doParallel", "foreach", "ggplot2", "gridExtra", "KernSmooth", "ks", "matrixcalc", "mbend", "mgcv", "misc3d", "pracma", "RColorBrewer", "rgl", "sp", "stringr"] + "depends": ["KernSmooth", "RColorBrewer", "doParallel", "foreach", "ggplot2", "gridExtra", "ks", "matrixcalc", "mbend", "mgcv", "misc3d", "pracma", "rgl", "sp", "stringr"] }, "refreshr": { "name": "refreshr", @@ -101505,8 +102567,8 @@ }, "refseqR": { "name": "refseqR", - "version": "1.0.2", - "sha256": "076ai3jgpll30fx7hnvy5b11n7v4c9vgsnkw98pfddi7p5xxiw2f", + "version": "1.1.4", + "sha256": "09zh4fq232arcykaflgjy2bmjikfqhrqbwfy6pdhj48ixwxbwdbf", "depends": ["Biostrings", "IRanges", "rentrez", "tibble"] }, "refset": { @@ -101523,15 +102585,15 @@ }, "refugees": { "name": "refugees", - "version": "2023.6.0", - "sha256": "1sy93zg4vjv02ga96vzhdjvgnwmv3gmd3m7w2fplah7d49i3z85v", + "version": "2023.12.0", + "sha256": "11isc2q3y3syi1hkvxg8rgism9qynskxypsivcvjdpdhw4sfh263", "depends": ["tibble"] }, "refund": { "name": "refund", "version": "0.1-35", "sha256": "0hdm8ycgxzmmpgp885w49fxzvn6j5078x42gf7hh1ms7w0k4k72g", - "depends": ["boot", "fda", "gamm4", "ggplot2", "grpreg", "lattice", "lme4", "magic", "MASS", "Matrix", "mgcv", "nlme", "pbs", "RLRsim"] + "depends": ["MASS", "Matrix", "RLRsim", "boot", "fda", "gamm4", "ggplot2", "grpreg", "lattice", "lme4", "magic", "mgcv", "nlme", "pbs"] }, "refund_shiny": { "name": "refund.shiny", @@ -101549,19 +102611,19 @@ "name": "regRSM", "version": "0.5", "sha256": "0nbp3yjk9r7qvwm7wla39155rmqnvpdb720iq3b0hcy1bbsxbk9s", - "depends": ["doParallel", "foreach", "Rmpi"] + "depends": ["Rmpi", "doParallel", "foreach"] }, "regclass": { "name": "regclass", "version": "1.6", "sha256": "0m974k3yhf0dgv5f1qjs8c53mam0cll3cjn35ywfrmlfla0wlhf5", - "depends": ["bestglm", "leaps", "randomForest", "rpart", "rpart_plot", "VGAM"] + "depends": ["VGAM", "bestglm", "leaps", "randomForest", "rpart", "rpart_plot"] }, "regda": { "name": "regda", "version": "1.0", "sha256": "0zdipzkf8yil1cf142g66cls9d2yabzag9k4nm9nab0nyfidkdcw", - "depends": ["doParallel", "foreach", "Rfast", "Rfast2"] + "depends": ["Rfast", "Rfast2", "doParallel", "foreach"] }, "regexPipes": { "name": "regexPipes", @@ -101579,7 +102641,7 @@ "name": "reghelper", "version": "1.1.2", "sha256": "1vd8kd719kyjp65zym6zx3vax1q2kbhpl6la71d5aa59s54ylri3", - "depends": ["ggplot2", "lme4", "MASS", "nlme", "rlang"] + "depends": ["MASS", "ggplot2", "lme4", "nlme", "rlang"] }, "regional": { "name": "regional", @@ -101603,7 +102665,7 @@ "name": "registr", "version": "2.1.0", "sha256": "033kvhcx27g0vw85gi8xb035wijqb6xsg8jjskqpp4l1gw3a1v1c", - "depends": ["dplyr", "gamm4", "lme4", "magrittr", "MASS", "Matrix", "mgcv", "pbs", "purrr", "Rcpp", "RcppArmadillo", "tidyr"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "dplyr", "gamm4", "lme4", "magrittr", "mgcv", "pbs", "purrr", "tidyr"] }, "registry": { "name": "registry", @@ -101615,31 +102677,31 @@ "name": "reglogit", "version": "1.2-7", "sha256": "0mknx71h24kbh4agarkhrfp2wz1kjvd34kv0c6qy0f1jwvr3kzr6", - "depends": ["boot", "Matrix", "mvtnorm"] + "depends": ["Matrix", "boot", "mvtnorm"] }, "regmed": { "name": "regmed", "version": "2.1.0", "sha256": "1m74865y2pahk50a149nv8aqkiilg23hbyijwmdcpqgi94ys40h3", - "depends": ["glasso", "gtools", "igraph", "knitr", "lavaan", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glasso", "gtools", "igraph", "knitr", "lavaan"] }, "regmedint": { "name": "regmedint", "version": "1.0.1", "sha256": "1f8p19a1m6qyypjfv8yr1gcqx6djjjkly3xxkp5fy5pldm7ik2sk", - "depends": ["assertthat", "Deriv", "MASS", "Matrix", "sandwich", "survival"] + "depends": ["Deriv", "MASS", "Matrix", "assertthat", "sandwich", "survival"] }, "regmhmm": { "name": "regmhmm", "version": "1.0.0", "sha256": "19w4r94n67wab3jswh0pdyj7237aijfxhz18s6cr9h4m9bldkvji", - "depends": ["glmnet", "glmnetUtils", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "glmnet", "glmnetUtils"] }, "regnet": { "name": "regnet", "version": "1.0.1", "sha256": "13d2awfq68im3zqab0pqg8mdi7ns7bam3ln94ysl8k86qi19i6ax", - "depends": ["glmnet", "igraph", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet", "igraph"] }, "rego": { "name": "rego", @@ -101657,7 +102719,7 @@ "name": "regport", "version": "0.3.0", "sha256": "0mbx1ja1mbhd0z7jcxjrs6b8ldp87ym21fyqigx3w295kh9zm0xx", - "depends": ["broom_helpers", "data_table", "dplyr", "forestploter", "glue", "parameters", "R6", "rlang", "survival"] + "depends": ["R6", "broom_helpers", "data_table", "dplyr", "forestploter", "glue", "parameters", "rlang", "survival"] }, "regr_easy": { "name": "regr.easy", @@ -101679,27 +102741,27 @@ }, "regressinator": { "name": "regressinator", - "version": "0.1.3", - "sha256": "103f940cy4xy0zs2j1jsx1kwwa5vy5j7975zl5qxaj1fn3a3jqcq", - "depends": ["broom", "cli", "dplyr", "ggplot2", "insight", "nullabor", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] + "version": "0.2.0", + "sha256": "1wl8xsy0q1g9rv203yl9jkqxi2cwfb80zax43vs6zr1ibyb3vf2d", + "depends": ["DHARMa", "broom", "cli", "dplyr", "ggplot2", "insight", "nullabor", "purrr", "rlang", "tibble", "tidyr", "tidyselect"] }, "regressoR": { "name": "regressoR", "version": "3.0.2", "sha256": "0c7kxhkcy02vlb0fabf70bzkrk6l7rsvj7ppx3nxhjrhfp7p8j2m", - "depends": ["dplyr", "DT", "echarts4r", "glmnet", "golem", "htmltools", "loadeR", "pls", "rlang", "rpart_plot", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "traineR"] + "depends": ["DT", "dplyr", "echarts4r", "glmnet", "golem", "htmltools", "loadeR", "pls", "rlang", "rpart_plot", "shiny", "shinyAce", "shinycustomloader", "shinydashboard", "shinydashboardPlus", "shinyjs", "traineR"] }, "regrrr": { "name": "regrrr", "version": "0.1.3", "sha256": "1ih27mgqfzjlas97rvj18s8j3p0bpwb03vr71yrq776vzv1v6fcs", - "depends": ["dplyr", "ggplot2", "lspline", "magrittr", "MuMIn", "purrr", "robustbase", "scales", "stringr", "tidyr", "usdm"] + "depends": ["MuMIn", "dplyr", "ggplot2", "lspline", "magrittr", "purrr", "robustbase", "scales", "stringr", "tidyr", "usdm"] }, "regsem": { "name": "regsem", "version": "1.9.5", "sha256": "0lvsy7byrhiizyhwnwr22v8g36735nb0liyzl1nzk0py9rjbv4kk", - "depends": ["lavaan", "Rcpp", "RcppArmadillo", "Rsolnp"] + "depends": ["Rcpp", "RcppArmadillo", "Rsolnp", "lavaan"] }, "regspec": { "name": "regspec", @@ -101717,13 +102779,13 @@ "name": "regtomean", "version": "1.1", "sha256": "0xw0pany9cwfxdn26ckk6fdjnqx1916288mhphsnvwns3383nq4k", - "depends": ["effsize", "formattable", "mefa", "plotrix", "plyr", "sjlabelled", "sjmisc", "sjPlot"] + "depends": ["effsize", "formattable", "mefa", "plotrix", "plyr", "sjPlot", "sjlabelled", "sjmisc"] }, "regtools": { "name": "regtools", "version": "1.7.0", "sha256": "00g50dcfy93rgy9a2l24rsjgwk1575gxhpg9dy5r9928nwwd6lx9", - "depends": ["car", "data_table", "FNN", "glmnet", "gtools", "MASS", "mvtnorm", "polyreg", "R_utils", "rje", "sandwich", "text2vec"] + "depends": ["FNN", "MASS", "R_utils", "car", "data_table", "glmnet", "gtools", "mvtnorm", "polyreg", "rje", "sandwich", "text2vec"] }, "rehh": { "name": "rehh", @@ -101765,13 +102827,13 @@ "name": "relSim", "version": "1.0.0", "sha256": "1f2dz25hkh2ak7cypn3zj9rabj3z7d59q4yhrrq4f6mzdki80d15", - "depends": ["multicool", "Rcpp", "rvest", "stringr", "xml2", "xtable"] + "depends": ["Rcpp", "multicool", "rvest", "stringr", "xml2", "xtable"] }, "relaimpo": { "name": "relaimpo", "version": "2.2-7", "sha256": "1430p6kxh582k0saagns6mxz7qp6myf6n66hp1p02isl61w3w6sa", - "depends": ["boot", "corpcor", "MASS", "mitools", "survey"] + "depends": ["MASS", "boot", "corpcor", "mitools", "survey"] }, "relatable": { "name": "relatable", @@ -101831,7 +102893,7 @@ "name": "relliptical", "version": "1.3.0", "sha256": "1d978ig1k6drb4imz04j28l1xbb04vl8l5iirhmlm096i7bn3psx", - "depends": ["FuzzyNumbers_Ext_2", "matrixcalc", "Rcpp", "RcppArmadillo", "Rdpack", "Ryacas0"] + "depends": ["FuzzyNumbers_Ext_2", "Rcpp", "RcppArmadillo", "Rdpack", "Ryacas0", "matrixcalc"] }, "relsurv": { "name": "relsurv", @@ -101843,19 +102905,19 @@ "name": "rem", "version": "1.3.1", "sha256": "1q4p26irhhl1lvc0ydv9wmng1y635zm16szpl7gwq1kyn2p90rai", - "depends": ["doParallel", "foreach", "Rcpp"] + "depends": ["Rcpp", "doParallel", "foreach"] }, "rema": { "name": "rema", "version": "0.0.1", "sha256": "15b68pynac9ff9bina0mf94absvfsn21xcdmvd4lbl97pxwj83ph", - "depends": ["progress", "Rcpp", "Rdpack"] + "depends": ["Rcpp", "Rdpack", "progress"] }, "remaCor": { "name": "remaCor", "version": "0.0.18", "sha256": "0c8n2zj84m2z0vznx81qrspnyyj38imb73di4l2k0brr8jxgzr2p", - "depends": ["EnvStats", "ggplot2", "mvtnorm", "Rcpp", "RcppArmadillo", "Rdpack", "reshape2"] + "depends": ["EnvStats", "Rcpp", "RcppArmadillo", "Rdpack", "ggplot2", "mvtnorm", "reshape2"] }, "remap": { "name": "remap", @@ -101885,7 +102947,7 @@ "name": "remify", "version": "3.2.6", "sha256": "062bgggz4bkzm3ijpghsrlf9q813zmzisxdwgzlizpqhzppwvzig", - "depends": ["igraph", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "igraph"] }, "remindR": { "name": "remindR", @@ -101897,7 +102959,7 @@ "name": "remiod", "version": "1.0.2", "sha256": "1darwljspxm6mkkp0d7xx375kvhlfwpzxc93yr2mb0mwi2877yi9", - "depends": ["coda", "data_table", "doFuture", "foreach", "future", "ggplot2", "JointAI", "mathjaxr", "Matrix", "mcmcse", "ordinal", "progressr", "rjags", "survival"] + "depends": ["JointAI", "Matrix", "coda", "data_table", "doFuture", "foreach", "future", "ggplot2", "mathjaxr", "mcmcse", "ordinal", "progressr", "rjags", "survival"] }, "remmy": { "name": "remmy", @@ -101909,13 +102971,13 @@ "name": "remote", "version": "1.2.1", "sha256": "1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w", - "depends": ["gridExtra", "latticeExtra", "mapdata", "raster", "Rcpp", "scales"] + "depends": ["Rcpp", "gridExtra", "latticeExtra", "mapdata", "raster", "scales"] }, "remotePARTS": { "name": "remotePARTS", "version": "1.0.4", "sha256": "0rhbvqiixzzwkyicd1w75xvbchhillsdwllgrglsbn04b4hzqa73", - "depends": ["CompQuadForm", "doParallel", "foreach", "geosphere", "iterators", "Rcpp", "RcppEigen"] + "depends": ["CompQuadForm", "Rcpp", "RcppEigen", "doParallel", "foreach", "geosphere", "iterators"] }, "remotes": { "name": "remotes", @@ -101925,8 +102987,8 @@ }, "rempsyc": { "name": "rempsyc", - "version": "0.1.7", - "sha256": "1s4iv2ssz12pppjc9glhnryfkqnafid3fz9gmvhs9k5jk3cnq4pa", + "version": "0.1.8", + "sha256": "0y5b0cv6zpdg51jlxkhnyvpk55v4pd188y87q2rx1zkj82v6cdlh", "depends": ["dplyr", "rlang"] }, "remss": { @@ -101945,7 +103007,7 @@ "name": "remstimate", "version": "2.3.11", "sha256": "0sa1fxpy9cpfxkm9pkb7kq6qbkv9bvq900j2182yrsx4g02sxa41", - "depends": ["mvnfast", "Rcpp", "RcppArmadillo", "remify", "remstats", "trust"] + "depends": ["Rcpp", "RcppArmadillo", "mvnfast", "remify", "remstats", "trust"] }, "renpow": { "name": "renpow", @@ -101957,7 +103019,7 @@ "name": "rentrez", "version": "1.2.3", "sha256": "0x1g2f6hvkqqlb39z8m5qxhcvsizddic5i7rpqw0wy77xfbna9gv", - "depends": ["httr", "jsonlite", "XML"] + "depends": ["XML", "httr", "jsonlite"] }, "renv": { "name": "renv", @@ -101981,7 +103043,7 @@ "name": "repana", "version": "2.2.0", "sha256": "1iyxyq8fl7cbbw374xc32fsrxsl40306anvyia6fwjr5j5dy7v5g", - "depends": ["config", "DBI", "digest", "dplyr", "lubridate", "magrittr", "openxlsx", "pool", "processx", "readr", "rmarkdown", "rstudioapi", "yaml"] + "depends": ["DBI", "config", "digest", "dplyr", "lubridate", "magrittr", "openxlsx", "pool", "processx", "readr", "rmarkdown", "rstudioapi", "yaml"] }, "repeated": { "name": "repeated", @@ -102017,7 +103079,7 @@ "name": "replicateBE", "version": "1.1.3", "sha256": "079fkrp9jhp3qr5a1wvz66ldqxbj2pqarmxq5f1adqnyym2aw684", - "depends": ["lmerTest", "nlme", "pbkrtest", "PowerTOST", "readxl"] + "depends": ["PowerTOST", "lmerTest", "nlme", "pbkrtest", "readxl"] }, "replicatedpp2w": { "name": "replicatedpp2w", @@ -102029,7 +103091,7 @@ "name": "repmis", "version": "0.5", "sha256": "0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5", - "depends": ["data_table", "digest", "httr", "plyr", "R_cache"] + "depends": ["R_cache", "data_table", "digest", "httr", "plyr"] }, "repmod": { "name": "repmod", @@ -102057,8 +103119,8 @@ }, "report": { "name": "report", - "version": "0.5.8", - "sha256": "0frqqijhr98nqpy157capkx6h93z2jaxsl8r0vl9vk3k2g120wq1", + "version": "0.5.9", + "sha256": "075x4kzqjwrfqp2130ahcvj70vip9k000pg6z48y75ry58y80iyx", "depends": ["bayestestR", "datawizard", "effectsize", "insight", "parameters", "performance"] }, "reportROC": { @@ -102077,7 +103139,7 @@ "name": "reportRmd", "version": "0.1.0", "sha256": "0z0k6g0dxxni78x9z6h29ybgdj38cyb8ywn1b1lbjqb1nkjc9phs", - "depends": ["aod", "cmprsk", "cowplot", "geepack", "ggplot2", "ggpubr", "gridExtra", "kableExtra", "knitr", "lifecycle", "MASS", "pander", "plyr", "rlang", "rstatix", "scales", "survival"] + "depends": ["MASS", "aod", "cmprsk", "cowplot", "geepack", "ggplot2", "ggpubr", "gridExtra", "kableExtra", "knitr", "lifecycle", "pander", "plyr", "rlang", "rstatix", "scales", "survival"] }, "reporter": { "name": "reporter", @@ -102119,7 +103181,7 @@ "name": "representr", "version": "0.1.5", "sha256": "0w84kh9nsa8861yfhj13f29wcdfs1mrhjr6jyvxk55f34vj7fhf1", - "depends": ["doParallel", "dplyr", "foreach", "Rcpp"] + "depends": ["Rcpp", "doParallel", "dplyr", "foreach"] }, "represtools": { "name": "represtools", @@ -102129,15 +103191,15 @@ }, "reprex": { "name": "reprex", - "version": "2.1.0", - "sha256": "0ld90pkw2r7z115xdnyqk4p39vnxrc8jnn57sl4bkpg5frczw38a", + "version": "2.1.1", + "sha256": "174705043b90phm6aj5yb199pn1clipsnqgvhskhxybypj63cq68", "depends": ["callr", "cli", "clipr", "fs", "glue", "knitr", "lifecycle", "rlang", "rmarkdown", "rstudioapi", "withr"] }, "reproducer": { "name": "reproducer", "version": "0.5.3", "sha256": "0nm8x1bwigbvkz7bbr313fmxb9ypk6dw2yl9g1cppdws2c6rq1mr", - "depends": ["dplyr", "GetoptLong", "ggplot2", "gridExtra", "httr", "jsonlite", "lme4", "MASS", "metafor", "nortest", "openxlsx", "readr", "reshape", "stringr", "tibble", "tidyr", "xtable"] + "depends": ["GetoptLong", "MASS", "dplyr", "ggplot2", "gridExtra", "httr", "jsonlite", "lme4", "metafor", "nortest", "openxlsx", "readr", "reshape", "stringr", "tibble", "tidyr", "xtable"] }, "reproducible": { "name": "reproducible", @@ -102149,7 +103211,7 @@ "name": "reproj", "version": "0.7.0", "sha256": "1r2m8j75hmy61h7ld0ra1kpigr1ax6zap8kjxkgjkxcdlqznbbxj", - "depends": ["crsmeta", "PROJ", "proj4"] + "depends": ["PROJ", "crsmeta", "proj4"] }, "repsd": { "name": "repsd", @@ -102167,13 +103229,13 @@ "name": "reqres", "version": "0.2.5", "sha256": "1j8gxacbfnaqvrhjqy851yb8shc73issv08yca6mbnx6aq34wcrd", - "depends": ["assertthat", "brotli", "jsonlite", "R6", "stringi", "urltools", "webutils", "xml2"] + "depends": ["R6", "assertthat", "brotli", "jsonlite", "stringi", "urltools", "webutils", "xml2"] }, "request": { "name": "request", "version": "0.1.0", "sha256": "1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh", - "depends": ["curl", "httr", "jsonlite", "lazyeval", "magrittr", "R6", "whisker"] + "depends": ["R6", "curl", "httr", "jsonlite", "lazyeval", "magrittr", "whisker"] }, "requiRements": { "name": "requiRements", @@ -102201,8 +103263,8 @@ }, "rerddapXtracto": { "name": "rerddapXtracto", - "version": "1.2.0", - "sha256": "0vd2zm3zmcssfr5p392kqmp70dwa7dxsmgp5pwm9cg0hs66i975m", + "version": "1.2.1", + "sha256": "0bamid5820zxbr4byqbzvflvgcbagd8lyyr72hbnfns9ficnj7xc", "depends": ["abind", "dplyr", "ggplot2", "httr", "maps", "ncdf4", "parsedate", "plotdap", "readr", "rerddap", "sf", "sp"] }, "resample": { @@ -102233,7 +103295,7 @@ "name": "resemble", "version": "2.2.3", "sha256": "1m27y1wmig4d7gxmli1n8mbqid9sh6vij0aj7vi1wk4vnwxgnq6w", - "depends": ["data_table", "foreach", "iterators", "lifecycle", "magrittr", "mathjaxr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "foreach", "iterators", "lifecycle", "magrittr", "mathjaxr"] }, "reservoir": { "name": "reservoir", @@ -102249,9 +103311,9 @@ }, "reservr": { "name": "reservr", - "version": "0.0.2", - "sha256": "0w6bax0ycmix46mm5jmr49vl7l3rnvwg4vv6xq78hdczspdbc0g7", - "depends": ["assertthat", "BH", "generics", "glue", "keras", "matrixStats", "nloptr", "numDeriv", "purrr", "R6", "Rcpp", "RcppArmadillo", "RcppParallel", "rlang"] + "version": "0.0.3", + "sha256": "1p0jxjv5kc6ggxynvxs3ikrrkdn5nv68h0sk2bvnvdariqhn0cny", + "depends": ["BH", "R6", "Rcpp", "RcppArmadillo", "RcppParallel", "assertthat", "generics", "glue", "keras3", "matrixStats", "nloptr", "numDeriv", "purrr", "rlang"] }, "resevol": { "name": "resevol", @@ -102269,12 +103331,12 @@ "name": "reshape2", "version": "1.4.4", "sha256": "1n0jrajpvc8hjkh9z4g8bwq63qy5vy5cgl2pzjardyih4ngcz3fq", - "depends": ["plyr", "Rcpp", "stringr"] + "depends": ["Rcpp", "plyr", "stringr"] }, "resilience": { "name": "resilience", - "version": "2023.1.1", - "sha256": "0pa0c5l3jm5szn7vffg030krn7f9lz9riqvjz9n7waiszfs0mzdr", + "version": "2024.1.1", + "sha256": "0rzjj6bsi9dwis0k3zl329njcb6khr4a037k7i8s20v28qvs760c", "depends": ["doParallel", "foreach", "nptest"] }, "reslife": { @@ -102287,19 +103349,19 @@ "name": "reslr", "version": "0.1.1", "sha256": "0hklhkr0fxrhhi6apskq498z1vv1w90zsfvvc344rmj9qid2lj2a", - "depends": ["data_table", "dplyr", "fastDummies", "fields", "geosphere", "ggplot2", "magrittr", "ncdf4", "plyr", "posterior", "purrr", "R2jags", "stringr", "tidybayes", "tidyr"] + "depends": ["R2jags", "data_table", "dplyr", "fastDummies", "fields", "geosphere", "ggplot2", "magrittr", "ncdf4", "plyr", "posterior", "purrr", "stringr", "tidybayes", "tidyr"] }, "resmush": { "name": "resmush", - "version": "0.1.1", - "sha256": "1qmgkxnbdlb544vyzwcsinpdafgq07bligx05pilcz73kic4bwla", + "version": "0.2.0", + "sha256": "0d4mldxxgfypfm9p2b38iqr55j31vcyim018m7csqxplmvxrs45b", "depends": ["cli", "curl", "httr2"] }, "resourcer": { "name": "resourcer", "version": "1.4.0", "sha256": "0rffkz2ybvr58jpa3kfiw4s3rk0cmrm9r5ca2abbzlcny7kxb7v5", - "depends": ["httr", "R6"] + "depends": ["R6", "httr"] }, "respR": { "name": "respR", @@ -102309,8 +103371,8 @@ }, "respirometry": { "name": "respirometry", - "version": "1.5.0", - "sha256": "17sfg3c1y7yhyyvq7krii2vazyvnqf1l0ifcdqsr477wwlnwyynr", + "version": "2.0.0", + "sha256": "0z8600bwh8c7kg69qf4nab26sqbxs73h24dfwk2fiispxvs1c83k", "depends": ["birk", "dplyr", "lubridate", "marelac", "measurements", "minpack_lm", "plyr", "rlang", "seacarb", "segmented"] }, "responsePatterns": { @@ -102327,9 +103389,9 @@ }, "restatis": { "name": "restatis", - "version": "0.1.0", - "sha256": "0y36qdnadmcdmwik2iyjh8h47jchrbwpal8djy29hx7q1140ra2r", - "depends": ["askpass", "httr2", "memoise", "readr", "tibble", "vctrs"] + "version": "0.2.0", + "sha256": "0n55gn2srd6m4a62bv6c6dcnfxy4lb4zhk7i2ggg8vz9xhxxwhnd", + "depends": ["askpass", "httr2", "memoise", "purrr", "readr", "tibble", "vctrs"] }, "restaurant": { "name": "restaurant", @@ -102341,13 +103403,13 @@ "name": "restez", "version": "2.1.4", "sha256": "1jzffv1lsxwa2dvkqx48ldwffghkg91vz99d9l3kjdxmg9gb8y9k", - "depends": ["ape", "assertthat", "cli", "crayon", "curl", "DBI", "duckdb", "fs", "rentrez", "stringi"] + "depends": ["DBI", "ape", "assertthat", "cli", "crayon", "curl", "duckdb", "fs", "rentrez", "stringi"] }, "restfulr": { "name": "restfulr", "version": "0.0.15", "sha256": "14p6h0gjknqy5z2fprxw7waf4p0cd2qmp18s7qig4ylqn8gqzzs0", - "depends": ["RCurl", "rjson", "S4Vectors", "XML", "yaml"] + "depends": ["RCurl", "S4Vectors", "XML", "rjson", "yaml"] }, "restimizeapi": { "name": "restimizeapi", @@ -102363,9 +103425,9 @@ }, "restriktor": { "name": "restriktor", - "version": "0.5-60", - "sha256": "0ksb1jqrkvqjhxcfx4wc6f27p097228h5ck3682409lmj3amp11r", - "depends": ["boot", "ggplot2", "glue", "ic_infer", "lavaan", "MASS", "mvtnorm", "norm", "pbapply", "quadprog", "tmvtnorm"] + "version": "0.5-80", + "sha256": "1dpkwwkww19pr57rqx77g8q1b0chflyihgb4nsdkaizgc5mh5r04", + "depends": ["MASS", "boot", "ggplot2", "glue", "gridExtra", "ic_infer", "lavaan", "mvtnorm", "norm", "pbapply", "quadprog", "scales", "tmvtnorm"] }, "result": { "name": "result", @@ -102373,6 +103435,12 @@ "sha256": "031vviwvn85k7hl04c4hqxycj8mnr2j00gi2jqpwdxrxjaaf1dzb", "depends": [] }, + "resultant": { + "name": "resultant", + "version": "1.0.0", + "sha256": "0d9mql0cn48mx3id6gfi3lqgbn1vbx0dpp3lvfcd7x3n3j9wdw1x", + "depends": ["BH", "Rcpp", "RcppCGAL", "gmp", "qspray"] + }, "resumer": { "name": "resumer", "version": "0.0.5", @@ -102383,7 +103451,7 @@ "name": "retel", "version": "0.1.0", "sha256": "1rajv6y3zsk7hd9wr7szxi685rh377hhvj69rvg77fn0pk56g40b", - "depends": ["checkmate", "Matrix", "matrixcalc", "nloptr"] + "depends": ["Matrix", "checkmate", "matrixcalc", "nloptr"] }, "rethinker": { "name": "rethinker", @@ -102393,15 +103461,15 @@ }, "rethnicity": { "name": "rethnicity", - "version": "0.2.4", - "sha256": "1h8d9q06dc98l55lqmjxf69ngvdj6r9fcck1bdvk0rin40q07zfk", - "depends": ["cli", "Rcpp", "RcppEigen", "RcppThread"] + "version": "0.2.5", + "sha256": "0v2v2vajidw9nv1c9drglyyy4smxz740zx3kvl77pn9djf2im85v", + "depends": ["Rcpp", "RcppEigen", "RcppThread", "cli"] }, "reticulate": { "name": "reticulate", - "version": "1.37.0", - "sha256": "0zn7rjdfrjhbghngaiir3safidbwqk3hpw6ik227gbhmm3zlk1l9", - "depends": ["here", "jsonlite", "Matrix", "png", "rappdirs", "Rcpp", "RcppTOML", "rlang", "withr"] + "version": "1.38.0", + "sha256": "13favs31kzzff7ii0fxsdwvwb3iijasn2mg57ghcv8si4cz32byb", + "depends": ["Matrix", "Rcpp", "RcppTOML", "here", "jsonlite", "png", "rappdirs", "rlang", "withr"] }, "retriever": { "name": "retriever", @@ -102437,7 +103505,7 @@ "name": "reutils", "version": "0.2.3", "sha256": "09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7", - "depends": ["assertthat", "jsonlite", "RCurl", "tibble", "XML"] + "depends": ["RCurl", "XML", "assertthat", "jsonlite", "tibble"] }, "reval": { "name": "reval", @@ -102447,15 +103515,15 @@ }, "revdbayes": { "name": "revdbayes", - "version": "1.5.3", - "sha256": "1pcz09zbgpivzykag087b0f2fz82m48idasddn85yh8wpv6ijsah", - "depends": ["bayesplot", "exdex", "Rcpp", "RcppArmadillo", "rust"] + "version": "1.5.5", + "sha256": "1s8hnc2izd2117njidgw4jj5qpwgn28nmghg69i0dhbw6vb5mhk0", + "depends": ["Rcpp", "RcppArmadillo", "bayesplot", "exdex", "rust"] }, "revealedPrefs": { "name": "revealedPrefs", "version": "0.4.1", "sha256": "1m8y1mj39bnf9q0n9mi0ashvb79lksx5dfkxb04qj2h5kkyxg49g", - "depends": ["pso", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "pso"] }, "revealjs": { "name": "revealjs", @@ -102485,7 +103553,7 @@ "name": "revert", "version": "0.0.1", "sha256": "1x3ykqlyhy9z1rizp4y1p90mkl2wv56k87z2qcz69dznys34z5xy", - "depends": ["Biostrings", "BSgenome", "BSgenome_Hsapiens_UCSC_hg38", "GenomicRanges", "IRanges", "Rsamtools"] + "depends": ["BSgenome", "BSgenome_Hsapiens_UCSC_hg38", "Biostrings", "GenomicRanges", "IRanges", "Rsamtools"] }, "revgeo": { "name": "revgeo", @@ -102501,15 +103569,15 @@ }, "revss": { "name": "revss", - "version": "1.0.6", - "sha256": "0c7yh3fyzhb5fxdmdwc04n26alca3l8g34fca20af9sn93s3bvih", + "version": "2.0.0", + "sha256": "1m3bkgvbq7x8s89a26a6kah3f141rig306jwvcb3h35f7kp72cpg", "depends": [] }, "revtools": { "name": "revtools", "version": "0.4.1", "sha256": "0nms7rwpdzf3xq2incraxppha4c830gcygpbnhwjs92c836hh2f0", - "depends": ["ade4", "modeltools", "ngram", "plotly", "shiny", "shinydashboard", "slam", "SnowballC", "stringdist", "tm", "topicmodels", "viridisLite"] + "depends": ["SnowballC", "ade4", "modeltools", "ngram", "plotly", "shiny", "shinydashboard", "slam", "stringdist", "tm", "topicmodels", "viridisLite"] }, "revulyticsR": { "name": "revulyticsR", @@ -102521,7 +103589,7 @@ "name": "rewie", "version": "0.1.0", "sha256": "1ysrpd2cqmz27sjj3dh0wpg86685d708kjwiqybwjlw9ap55jb06", - "depends": ["lme4", "MASS", "plm", "rockchalk"] + "depends": ["MASS", "lme4", "plm", "rockchalk"] }, "rex": { "name": "rex", @@ -102561,8 +103629,8 @@ }, "rfacebookstat": { "name": "rfacebookstat", - "version": "2.10.0", - "sha256": "179wwpyzhli8h1skn7y3jjms3rigfrgxsv9v0n0npwr1g0r5sv8r", + "version": "2.11.0", + "sha256": "1xlj65pg87hhpc9cg9cz8xzg8f0dx4qcg76bvgpvdsd55pn8qilf", "depends": ["dplyr", "httr", "jsonlite", "pbapply", "purrr", "stringr", "tidyr", "tidyselect"] }, "rfacts": { @@ -102587,7 +103655,7 @@ "name": "rfigshare", "version": "0.3.8", "sha256": "10shwl1y9220m7ld5w9fjsjzy5yg8myrz9cz97ps9z2bw7bvka5j", - "depends": ["ggplot2", "httpuv", "httr", "RJSONIO", "XML", "yaml"] + "depends": ["RJSONIO", "XML", "ggplot2", "httpuv", "httr", "yaml"] }, "rfinterval": { "name": "rfinterval", @@ -102599,7 +103667,7 @@ "name": "rfishbase", "version": "4.1.2", "sha256": "1v0dzgzxl1p6ay60z0dfmi499hzywi5k4vdrf5ag4q6zvrk0vp8w", - "depends": ["contentid", "DBI", "dbplyr", "dplyr", "duckdb", "fs", "glue", "jsonlite", "magrittr", "memoise", "progress", "purrr", "readr", "rlang", "rstudioapi", "stringr", "tibble"] + "depends": ["DBI", "contentid", "dbplyr", "dplyr", "duckdb", "fs", "glue", "jsonlite", "magrittr", "memoise", "progress", "purrr", "readr", "rlang", "rstudioapi", "stringr", "tibble"] }, "rfishdraw": { "name": "rfishdraw", @@ -102629,7 +103697,7 @@ "name": "rflexscan", "version": "1.1.0", "sha256": "0jlswyfdmi4c8jd2m56inid08injjjmmjy3m3hmqspm6arv9flq1", - "depends": ["igraph", "Rcpp", "sf"] + "depends": ["Rcpp", "igraph", "sf"] }, "rflsgen": { "name": "rflsgen", @@ -102641,7 +103709,7 @@ "name": "rfm", "version": "0.3.0", "sha256": "0n0sbf9c3p0df0vdymyp6pbfvyf0nh90fxjxwkdg3l5hm8m26hkp", - "depends": ["dplyr", "ggplot2", "magrittr", "RColorBrewer", "rlang", "scales", "treemapify", "xplorerr"] + "depends": ["RColorBrewer", "dplyr", "ggplot2", "magrittr", "rlang", "scales", "treemapify", "xplorerr"] }, "rfoaas": { "name": "rfoaas", @@ -102689,19 +103757,19 @@ "name": "rgbif", "version": "3.8.0", "sha256": "1s1cdls4sv2ncxp8c9a2rah9yw95rlvfskzcg2bx74a282bd0p4b", - "depends": ["crul", "data_table", "ggplot2", "jsonlite", "lazyeval", "magrittr", "oai", "R6", "tibble", "whisker", "wk", "xml2"] + "depends": ["R6", "crul", "data_table", "ggplot2", "jsonlite", "lazyeval", "magrittr", "oai", "tibble", "whisker", "wk", "xml2"] }, "rgdax": { "name": "rgdax", "version": "1.2.1", "sha256": "01hpyyhb6jcw9w0q9h4ghgh4cbba27mfl9zdv4vv4ppakvl80czl", - "depends": ["digest", "httr", "jsonlite", "plyr", "RCurl"] + "depends": ["RCurl", "digest", "httr", "jsonlite", "plyr"] }, "rgee": { "name": "rgee", "version": "1.1.7", "sha256": "1v6xczz7n3gby7ckh323yr5jqvzsvpjy1qszqh9hk7a56m3y31mh", - "depends": ["cli", "crayon", "jsonlite", "leafem", "leaflet", "magrittr", "processx", "R6", "reticulate", "rstudioapi"] + "depends": ["R6", "cli", "crayon", "jsonlite", "leafem", "leaflet", "magrittr", "processx", "reticulate", "rstudioapi"] }, "rgeedim": { "name": "rgeedim", @@ -102737,13 +103805,13 @@ "name": "rgeoda", "version": "0.0.10-4", "sha256": "18rcrlah1iaqvf90cymh71c8wpgy3yxlwlq84waxilpccwhd68x0", - "depends": ["BH", "digest", "Rcpp", "sf"] + "depends": ["BH", "Rcpp", "digest", "sf"] }, "rgeomstats": { "name": "rgeomstats", "version": "0.0.1", "sha256": "1fy5fvkifv80sf3x0d2y3vyv7adn0h57q1hvip1phcvxg8p5prff", - "depends": ["cli", "purrr", "R6", "Rdpack", "reticulate", "rlang"] + "depends": ["R6", "Rdpack", "cli", "purrr", "reticulate", "rlang"] }, "rgeopat2": { "name": "rgeopat2", @@ -102753,21 +103821,21 @@ }, "rgexf": { "name": "rgexf", - "version": "0.16.2", - "sha256": "00c2zka1n3k7p1l0mlchr063s6x58p9r3fb64d4wgl4rvsq55q3f", - "depends": ["igraph", "servr", "XML"] + "version": "0.16.3", + "sha256": "1c1rqgr7qsj61gp2frm197k396xfdspvmmwr56izwb09225cbp6d", + "depends": ["XML", "igraph", "servr"] }, "rgho": { "name": "rgho", "version": "3.0.2", "sha256": "1j46pkb8n2hn1isz5xgfagwn77cxs48wv3rs4qqvq2nq1r5bpa4x", - "depends": ["curl", "dplyr", "httr", "lifecycle", "magrittr", "ODataQuery", "rlang", "tibble", "tidyr"] + "depends": ["ODataQuery", "curl", "dplyr", "httr", "lifecycle", "magrittr", "rlang", "tibble", "tidyr"] }, "rgl": { "name": "rgl", "version": "1.3.1", "sha256": "0jbda1b4lrkcpdld369687pm7isy69l5sx1wg2yrpvvzvmcppslz", - "depends": ["base64enc", "htmltools", "htmlwidgets", "jsonlite", "knitr", "magrittr", "mime", "R6"] + "depends": ["R6", "base64enc", "htmltools", "htmlwidgets", "jsonlite", "knitr", "magrittr", "mime"] }, "rgl_cry": { "name": "rgl.cry", @@ -102779,13 +103847,13 @@ "name": "rgl2gltf", "version": "1.0.3", "sha256": "0krn4dp8xf6z5363agz42v4dwhhxdrxpqzhmf9yd8xl2l3yj6pfp", - "depends": ["base64enc", "jsonlite", "R6", "rgl"] + "depends": ["R6", "base64enc", "jsonlite", "rgl"] }, "rglobi": { "name": "rglobi", "version": "0.3.4", "sha256": "14jwl1cl20q7sgsiidd2sd2p2vjjfvqam0bijg9j8328g27cbi63", - "depends": ["curl", "RCurl", "readr"] + "depends": ["RCurl", "curl", "readr"] }, "rglplus": { "name": "rglplus", @@ -102797,13 +103865,13 @@ "name": "rgm", "version": "1.0.4", "sha256": "0d6149mg0mvnp64dnn3nh9bxqcal324pjipnbqsmfslhk8sw8bwb", - "depends": ["BDgraph", "ggplot2", "huge", "MASS", "pROC", "Rcpp", "reshape2", "truncnorm"] + "depends": ["BDgraph", "MASS", "Rcpp", "ggplot2", "huge", "pROC", "reshape2", "truncnorm"] }, "rgnoisefilt": { "name": "rgnoisefilt", "version": "1.1.2", "sha256": "0rdjbxws1bimpnwfv46yycafvwjc2lcqgdf993f5mm2sg2fxv2da", - "depends": ["arules", "class", "e1071", "entropy", "FNN", "gbm", "ggplot2", "infotheo", "kknn", "modelr", "nnet", "randomForest", "rpart"] + "depends": ["FNN", "arules", "class", "e1071", "entropy", "gbm", "ggplot2", "infotheo", "kknn", "modelr", "nnet", "randomForest", "rpart"] }, "rgnparser": { "name": "rgnparser", @@ -102821,13 +103889,13 @@ "name": "rgoogleclassroom", "version": "0.9.1", "sha256": "0s4s5ipvnbwrf76ihzcjqkf3l1j008gn0ncl2a4znp9ka432gk49", - "depends": ["assertthat", "attempt", "curl", "dplyr", "httr", "jsonlite", "knitr", "lubridate", "magrittr", "openssl", "ottrpal", "purrr", "R6", "stringr"] + "depends": ["R6", "assertthat", "attempt", "curl", "dplyr", "httr", "jsonlite", "knitr", "lubridate", "magrittr", "openssl", "ottrpal", "purrr", "stringr"] }, "rgoogleslides": { "name": "rgoogleslides", "version": "0.3.2", "sha256": "0h9gws1vcf0zdd21d8b65c2yz9kxppp3218h5lhd5iz879ajwa2i", - "depends": ["assertthat", "httr", "jsonlite", "R6"] + "depends": ["R6", "assertthat", "httr", "jsonlite"] }, "rgplates": { "name": "rgplates", @@ -102843,8 +103911,8 @@ }, "rgrass": { "name": "rgrass", - "version": "0.4-2", - "sha256": "0b95b52yrpagjcfi8wxsg8cf5zfhrdlxzvppnb73815cj39wdfns", + "version": "0.4-3", + "sha256": "1zn549yas4j8m9qn3c0zsa0qfbc221v7q612rhb5rg45jw2bfy19", "depends": ["xml2"] }, "rgsp": { @@ -102897,8 +103965,8 @@ }, "rhino": { "name": "rhino", - "version": "1.8.0", - "sha256": "1vsf5bvbqdrvsd21z1ps1hxxmpkf39x2xk5wk45695pg9zq8dy19", + "version": "1.9.0", + "sha256": "0s7l23zmdskidqhc49j77qxi1nj321q5rgdayq91fdg1vcchrwvp", "depends": ["box", "box_linters", "cli", "config", "fs", "glue", "lintr", "logger", "purrr", "renv", "rstudioapi", "sass", "shiny", "styler", "testthat", "withr", "yaml"] }, "rhmc": { @@ -102941,7 +104009,7 @@ "name": "rhub", "version": "2.0.0", "sha256": "05q1jv7c2l09ssb72d17hhcisvzqmcd3d1njc1j6w8lhvc5kqs47", - "depends": ["callr", "cli", "curl", "desc", "gert", "gitcreds", "glue", "jsonlite", "pkgbuild", "processx", "R6", "rappdirs", "rematch", "rprojroot", "whoami"] + "depends": ["R6", "callr", "cli", "curl", "desc", "gert", "gitcreds", "glue", "jsonlite", "pkgbuild", "processx", "rappdirs", "rematch", "rprojroot", "whoami"] }, "rhymer": { "name": "rhymer", @@ -102965,7 +104033,7 @@ "name": "riAFTBART", "version": "0.3.3", "sha256": "0wcnw955zqmr7qqwwb3d37km6nkhwvhvaissv97fxkq9rwyz67ky", - "depends": ["BART", "cowplot", "dbarts", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "MCMCpack", "msm", "nnet", "randomForest", "RRF", "stringr", "survival", "tidyr", "twang"] + "depends": ["BART", "MCMCpack", "RRF", "cowplot", "dbarts", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "msm", "nnet", "randomForest", "stringr", "survival", "tidyr", "twang"] }, "rib": { "name": "rib", @@ -103007,7 +104075,7 @@ "name": "rid", "version": "0.0.1", "sha256": "1m213jxqhb95q7cj9nl1wj8ikzmpx3sn9xn9q1p7vhczp58yb578", - "depends": ["CircularSilhouette", "pracma", "purrr", "Rcpp", "RcppEigen"] + "depends": ["CircularSilhouette", "Rcpp", "RcppEigen", "pracma", "purrr"] }, "ridge": { "name": "ridge", @@ -103019,7 +104087,7 @@ "name": "ridgetorus", "version": "1.0.2", "sha256": "04wabvf7agyk8djfqn41zcsj33940vx32zzf6811h4n5bs14kp65", - "depends": ["circular", "Rcpp", "RcppArmadillo", "rootSolve", "sdetorus", "sphunif"] + "depends": ["Rcpp", "RcppArmadillo", "circular", "rootSolve", "sdetorus", "sphunif"] }, "ridgregextra": { "name": "ridgregextra", @@ -103041,8 +104109,8 @@ }, "riem": { "name": "riem", - "version": "0.3.1", - "sha256": "04j9g0g3wgwm0qikad35vi0jb55n7bna12gq5jgy1kkc26l1srgw", + "version": "0.3.2", + "sha256": "0cvgddp7k7905k7cfz12cz48iv8ygli2n2nk1jyaxjxqvghv5zql", "depends": ["cli", "httr2", "jsonlite", "lubridate", "magrittr", "purrr", "rlang", "tibble"] }, "rifle": { @@ -103055,7 +104123,7 @@ "name": "rifreg", "version": "0.1.0", "sha256": "053hlvx3yibiadzwjsv55qvysc0bkznzqk61rjwb23lyxvjbb3rq", - "depends": ["Formula", "ggplot2", "Hmisc", "pbapply", "sandwich"] + "depends": ["Formula", "Hmisc", "ggplot2", "pbapply", "sandwich"] }, "rigr": { "name": "rigr", @@ -103073,13 +104141,13 @@ "name": "rim", "version": "0.6.4", "sha256": "0i4xb56kj4w9hd5i4g42y1ml6yy3p94lsmfm5mlkwixg8f25hhwj", - "depends": ["GlobalOptions", "knitr", "R6", "Rcpp"] + "depends": ["GlobalOptions", "R6", "Rcpp", "knitr"] }, "rimu": { "name": "rimu", "version": "0.6", "sha256": "0233dxj6z87piz88v15yg7gby0vm44mqhf76944lr8z17w2rrf8m", - "depends": ["ggplot2", "UpSetR"] + "depends": ["UpSetR", "ggplot2"] }, "rinat": { "name": "rinat", @@ -103125,9 +104193,9 @@ }, "rio": { "name": "rio", - "version": "1.1.1", - "sha256": "0llvdd4vdxpvjvbya3b6kh04h0k48ijy4dkjl77ynvhlh9wyzw9y", - "depends": ["curl", "data_table", "foreign", "haven", "lifecycle", "R_utils", "readr", "readxl", "tibble", "writexl"] + "version": "1.2.1", + "sha256": "0iqfgic57qzbgqqxgfrccxwi05zknlgr5v929qqmb4mxx3569fmw", + "depends": ["R_utils", "curl", "data_table", "foreign", "haven", "lifecycle", "readr", "readxl", "tibble", "writexl"] }, "rioja": { "name": "rioja", @@ -103143,8 +104211,8 @@ }, "ripc": { "name": "ripc", - "version": "0.3.0", - "sha256": "1a89qg6q6ysvaggf50qdrpcfcjk6zrv133g93p9pq35d2ldava55", + "version": "0.3.1", + "sha256": "0pb19jx682xabfymyc97hnw4w5im285gkjmsa6pa5y5gd4gc8ikb", "depends": ["countrycode", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "purrr", "readr", "rlang", "sf", "stringr", "tidyr"] }, "ripserr": { @@ -103169,25 +104237,25 @@ "name": "riskCommunicator", "version": "1.0.1", "sha256": "07rfqaf5dpj0wgbz65kdxzl762w8k5a2fsfmg1g895y2i5npq6mz", - "depends": ["boot", "dplyr", "ggplot2", "ggpubr", "magrittr", "MASS", "purrr", "rlang", "tidyr", "tidyselect"] + "depends": ["MASS", "boot", "dplyr", "ggplot2", "ggpubr", "magrittr", "purrr", "rlang", "tidyr", "tidyselect"] }, "riskParityPortfolio": { "name": "riskParityPortfolio", "version": "0.2.2", "sha256": "1n2z1vhslrip209j79wm03wmwqdcnbm939sir2wfs5h2cfv126xk", - "depends": ["alabama", "Matrix", "nloptr", "quadprog", "Rcpp", "RcppEigen"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "alabama", "nloptr", "quadprog"] }, "riskPredictClustData": { "name": "riskPredictClustData", "version": "0.2.6", "sha256": "0mvy9299pg374gvvqs9lmj2j0f3bzyy279kjpz7jq35hkgz5wif3", - "depends": ["gee", "Hmisc", "MASS", "mvtnorm"] + "depends": ["Hmisc", "MASS", "gee", "mvtnorm"] }, "riskRegression": { "name": "riskRegression", "version": "2023.12.21", "sha256": "07cvj86v2k1i34yrsqcgl2wqxlbbmslbbilvcnvkwfsk9l6ajk5c", - "depends": ["cmprsk", "data_table", "doParallel", "foreach", "ggplot2", "lattice", "lava", "mets", "mvtnorm", "plotrix", "prodlim", "Publish", "ranger", "Rcpp", "RcppArmadillo", "rms", "survival", "timereg"] + "depends": ["Publish", "Rcpp", "RcppArmadillo", "cmprsk", "data_table", "doParallel", "foreach", "ggplot2", "lattice", "lava", "mets", "mvtnorm", "plotrix", "prodlim", "ranger", "rms", "survival", "timereg"] }, "riskSimul": { "name": "riskSimul", @@ -103205,7 +104273,7 @@ "name": "riskmetric", "version": "0.2.4", "sha256": "00zc0jnnkx8z4mgr4h7w1xh8id4bai5l8jvh10xhylsvc1gy4ysg", - "depends": ["backports", "BiocManager", "covr", "cranlogs", "curl", "devtools", "httr", "memoise", "pillar", "pkgload", "tibble", "urltools", "vctrs", "xml2"] + "depends": ["BiocManager", "backports", "covr", "cranlogs", "curl", "devtools", "httr", "memoise", "pillar", "pkgload", "tibble", "urltools", "vctrs", "xml2"] }, "risks": { "name": "risks", @@ -103247,7 +104315,7 @@ "name": "riverconn", "version": "0.3.31", "sha256": "094w6mkndpvwldmlak2z1dm7n093n3s81mnz4x9dac6mrdl63s19", - "depends": ["dodgr", "doParallel", "dplyr", "foreach", "igraph", "magrittr", "reshape2", "rlang", "tidyr", "tidyselect"] + "depends": ["doParallel", "dodgr", "dplyr", "foreach", "igraph", "magrittr", "reshape2", "rlang", "tidyr", "tidyselect"] }, "riverdist": { "name": "riverdist", @@ -103265,7 +104333,7 @@ "name": "rivnet", "version": "0.4.2", "sha256": "1mzhxf3xirblbrz13w29970ja9ldhsfjk2pszj86z39dyby17dj0", - "depends": ["curl", "elevatr", "fields", "OCNet", "raster", "Rcpp", "sf", "spam", "terra", "traudem"] + "depends": ["OCNet", "Rcpp", "curl", "elevatr", "fields", "raster", "sf", "spam", "terra", "traudem"] }, "rivr": { "name": "rivr", @@ -103289,19 +104357,19 @@ "name": "rjdmarkdown", "version": "0.2.2", "sha256": "1g1r11zi8agifndlnayrh1vbz570s2x535kn89yz1llrk378v9c5", - "depends": ["kableExtra", "knitr", "magrittr", "RJDemetra"] + "depends": ["RJDemetra", "kableExtra", "knitr", "magrittr"] }, "rjdqa": { "name": "rjdqa", "version": "0.1.5", "sha256": "0m3r5ficsj1hlp72imb1v2fbl2kvh9gni2rkff66wag805v0sjxp", - "depends": ["ggdemetra", "plotrix", "RJDemetra"] + "depends": ["RJDemetra", "ggdemetra", "plotrix"] }, "rjdworkspace": { "name": "rjdworkspace", "version": "1.1.7", "sha256": "19knl5qynwa3f2f77fkxv0fg13hqcdrkh5rwrpzd3gv71iifzc8r", - "depends": ["rJava", "RJDemetra", "XML"] + "depends": ["RJDemetra", "XML", "rJava"] }, "rje": { "name": "rje", @@ -103329,9 +104397,9 @@ }, "rjsoncons": { "name": "rjsoncons", - "version": "1.3.0", - "sha256": "09dxvw64kri4dx5hn399r0w50zvi13sk9fzyijy45a7m5366wq0w", - "depends": ["cli", "cpp11"] + "version": "1.3.1", + "sha256": "1icp56jimfsjjniq1sg45g89xfq56x8728dkp0c2pv7snjpxjcjl", + "depends": ["cli", "cpp11", "tibble"] }, "rjstat": { "name": "rjstat", @@ -103355,7 +104423,13 @@ "name": "rkafkajars", "version": "1.2", "sha256": "1z1rn02ymzaq3v3pz206wlm78y591xa9780fwf77i4vfq2k9pxrz", - "depends": ["rJava", "RUnit"] + "depends": ["RUnit", "rJava"] + }, + "rkriging": { + "name": "rkriging", + "version": "1.0.1", + "sha256": "05hi1b2qlsc93iq4rhczrimc9pqnfmssmxmsa0fcgqwvpn0l934q", + "depends": ["BH", "Rcpp", "RcppEigen", "nloptr"] }, "rkt": { "name": "rkt", @@ -103383,15 +104457,15 @@ }, "rlas": { "name": "rlas", - "version": "1.7.0", - "sha256": "0abbzh17cyiamgdln55b23nsywr3p60bk7n3wv70asg945pqnxhi", - "depends": ["BH", "data_table", "Rcpp"] + "version": "1.8.0", + "sha256": "0fqlg2hqyxvv7lfrqy8qjf1vbxwf5irsw70h7qqw1n5wrv7h6yfw", + "depends": ["Rcpp", "data_table"] }, "rlc": { "name": "rlc", "version": "0.5.0", "sha256": "1n13hlspsb118md6nh1w09gww4b58kxqf3lcp8g3zv14hr2dgwkr", - "depends": ["hwriter", "jrc", "jsonlite", "plyr", "R6", "stringr"] + "depends": ["R6", "hwriter", "jrc", "jsonlite", "plyr", "stringr"] }, "rlcv": { "name": "rlcv", @@ -103433,7 +104507,7 @@ "name": "rlfsm", "version": "1.1.2", "sha256": "0qlyz4v1966x73hx3lwv1kgk18304xfp9qm66cb9a6g8bk54xp8z", - "depends": ["doParallel", "foreach", "ggplot2", "plyr", "Rcpp", "Rdpack", "reshape2", "stabledist"] + "depends": ["Rcpp", "Rdpack", "doParallel", "foreach", "ggplot2", "plyr", "reshape2", "stabledist"] }, "rlibkriging": { "name": "rlibkriging", @@ -103445,7 +104519,7 @@ "name": "rliger", "version": "2.0.1", "sha256": "1903jylhv6pb87p4zywx8b5aqvf3c96lpx479r1c58lbc0i3f5p1", - "depends": ["circlize", "cli", "ComplexHeatmap", "cowplot", "dplyr", "ggplot2", "hdf5r", "leidenAlg", "lifecycle", "magrittr", "Matrix", "RANN", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "rlang", "Rtsne", "S4Vectors", "scales", "uwot", "viridis"] + "depends": ["ComplexHeatmap", "Matrix", "RANN", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "Rtsne", "S4Vectors", "circlize", "cli", "cowplot", "dplyr", "ggplot2", "hdf5r", "leidenAlg", "lifecycle", "magrittr", "rlang", "scales", "uwot", "viridis"] }, "rlinkedinads": { "name": "rlinkedinads", @@ -103457,12 +104531,12 @@ "name": "rlist", "version": "0.4.6.2", "sha256": "15q99rhbbjq8zd976yjmfnny45dd5fg2p2dv1sljg2kwi66nbppb", - "depends": ["data_table", "jsonlite", "XML", "yaml"] + "depends": ["XML", "data_table", "jsonlite", "yaml"] }, "rlistings": { "name": "rlistings", - "version": "0.2.8", - "sha256": "1x0i2gis01ik9r0fy2znzlg0chgcjablk74xncsj7cgpgvdzfwmi", + "version": "0.2.9", + "sha256": "09rgmjh88lp27bfw7rm0xbfw4f1m73hmjcz7f33lvvkbrydc4h91", "depends": ["checkmate", "formatters", "tibble"] }, "rllama": { @@ -103481,7 +104555,7 @@ "name": "rlme", "version": "0.5", "sha256": "0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif", - "depends": ["magic", "MASS", "mgcv", "nlme", "quantreg", "Rcpp", "robustbase", "stringr"] + "depends": ["MASS", "Rcpp", "magic", "mgcv", "nlme", "quantreg", "robustbase", "stringr"] }, "rlog": { "name": "rlog", @@ -103493,13 +104567,13 @@ "name": "rly", "version": "1.7.4", "sha256": "044rpc1gs1jhm2hlmdmwinf24qvh2d0d6kg55zicmwdcdf8gnn8z", - "depends": ["futile_logger", "R6"] + "depends": ["R6", "futile_logger"] }, "rmBayes": { "name": "rmBayes", "version": "0.1.16", "sha256": "1a32xghqphnyx8w8dy6970f5d30m5ghjgwxa5g7qbzw3fc0b7ic3", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools"] }, "rma_exact": { "name": "rma.exact", @@ -103507,6 +104581,12 @@ "sha256": "1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx", "depends": ["abind", "metafor"] }, + "rmacrostrat": { + "name": "rmacrostrat", + "version": "0.0.1", + "sha256": "1db884smxz6vymvm7ihm63gvwiv8hpragk0cmjzpfw6qrl76sn40", + "depends": ["curl", "geojsonsf", "httr", "jsonlite", "sf"] + }, "rmake": { "name": "rmake", "version": "1.1.0", @@ -103517,13 +104597,13 @@ "name": "rmapshaper", "version": "0.5.0", "sha256": "01c1sd02ws3k2dmlj964c4j5jg93x192s3brhmaw4pi4qfjzc21x", - "depends": ["geojsonsf", "jsonify", "readr", "sf", "sp", "V8"] + "depends": ["V8", "geojsonsf", "jsonify", "readr", "sf", "sp"] }, "rmapzen": { "name": "rmapzen", "version": "0.5.1", "sha256": "17nphlsck1fjkhfjbwdxzyxxn23z626wy49gpkf2jvan4lg7bb84", - "depends": ["assertthat", "digest", "dplyr", "geojsonio", "httr", "ISOcodes", "jsonlite", "purrr", "sf", "tibble", "tidyr"] + "depends": ["ISOcodes", "assertthat", "digest", "dplyr", "geojsonio", "httr", "jsonlite", "purrr", "sf", "tibble", "tidyr"] }, "rmarchingcubes": { "name": "rmarchingcubes", @@ -103539,8 +104619,8 @@ }, "rmarkdown": { "name": "rmarkdown", - "version": "2.27", - "sha256": "17rba2k1n945i56am345v9zfgdwm4rjmhcwdm7z8g1agmczcpsb1", + "version": "2.28", + "sha256": "11d0fpzcwgi84dfbvjpg33gn155g3m2pa1jsih1h6hidm41sa0m1", "depends": ["bslib", "evaluate", "fontawesome", "htmltools", "jquerylib", "jsonlite", "knitr", "tinytex", "xfun", "yaml"] }, "rmass2": { @@ -103559,25 +104639,25 @@ "name": "rmcfs", "version": "1.3.5", "sha256": "0rbq2b9fw1x44v7ifxp8qgp4yciinw2sw9mqp4ms5jsxznpi2pi6", - "depends": ["data_table", "dplyr", "ggplot2", "gridExtra", "igraph", "reshape2", "rJava", "stringi", "yaml"] + "depends": ["data_table", "dplyr", "ggplot2", "gridExtra", "igraph", "rJava", "reshape2", "stringi", "yaml"] }, "rmcorr": { "name": "rmcorr", - "version": "0.6.0", - "sha256": "0p3vqhqyh4lrnlj05bdqxza2dl08nmfadsl0dg67vbr3rjzfh62k", - "depends": ["psych", "RColorBrewer"] + "version": "0.7.0", + "sha256": "03i460ccajvy2swb86mcygs2wxjiyw0k9vx6vc4gqvh0l772ciha", + "depends": ["RColorBrewer", "psych"] }, "rmdHelpers": { "name": "rmdHelpers", - "version": "1.2", - "sha256": "1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r", + "version": "1.3.1", + "sha256": "0bmdq6s8ywakz3gxskm6ph2gc80yzrjnzns4q09n05hy6l034058", "depends": ["dplyr", "knitr"] }, "rmda": { "name": "rmda", "version": "1.6", "sha256": "1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc", - "depends": ["caret", "MASS", "pander", "reshape"] + "depends": ["MASS", "caret", "pander", "reshape"] }, "rmdfiltr": { "name": "rmdfiltr", @@ -103637,13 +104717,13 @@ "name": "rmfanova", "version": "0.1.0", "sha256": "1wm849b2s1s691ln9vycww0ai5002y7y92a2vkrg7g50rgqg21qa", - "depends": ["doParallel", "foreach", "MASS", "refund"] + "depends": ["MASS", "doParallel", "foreach", "refund"] }, "rmgarch": { "name": "rmgarch", "version": "1.3-9", "sha256": "0sg10j4jp74s65lzs2da2qqdcwgkf71rss9p7f1b14n2yz7xdf1v", - "depends": ["Bessel", "corpcor", "ff", "MASS", "Matrix", "pcaPP", "Rcpp", "RcppArmadillo", "Rsolnp", "rugarch", "shape", "spd", "xts", "zoo"] + "depends": ["Bessel", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rsolnp", "corpcor", "ff", "pcaPP", "rugarch", "shape", "spd", "xts", "zoo"] }, "rmi": { "name": "rmi", @@ -103655,13 +104735,13 @@ "name": "rminer", "version": "1.4.6", "sha256": "1xydc43is756cy4vsm4k4micj88hhqgyrhb8cmvgv1y8zfrzg2qz", - "depends": ["adabag", "Cubist", "e1071", "glmnet", "kernlab", "kknn", "lattice", "MASS", "mda", "nnet", "party", "plotrix", "pls", "randomForest", "rpart", "xgboost"] + "depends": ["Cubist", "MASS", "adabag", "e1071", "glmnet", "kernlab", "kknn", "lattice", "mda", "nnet", "party", "plotrix", "pls", "randomForest", "rpart", "xgboost"] }, "rminizinc": { "name": "rminizinc", "version": "0.0.8", "sha256": "0yyg8ikdlksxlsc8ms4gb8dvpdjk26np6cpm5a7rjp748x8is6qx", - "depends": ["checkmate", "R6", "Rcpp", "rjson", "rlang", "rlist"] + "depends": ["R6", "Rcpp", "checkmate", "rjson", "rlang", "rlist"] }, "rminqa": { "name": "rminqa", @@ -103691,19 +104771,19 @@ "name": "rmpw", "version": "0.0.5", "sha256": "150wvnzhwvi8vv76glrbqns1r09cx42fxjrpfvvkdjd5vsbhmibv", - "depends": ["gtools", "MASS"] + "depends": ["MASS", "gtools"] }, "rms": { "name": "rms", "version": "6.8-1", "sha256": "0sjr4lwvh05ji8s6jk2f4imnyzsaw8f1iqds8b1661s395bm8f4x", - "depends": ["cluster", "colorspace", "digest", "ggplot2", "Hmisc", "htmlTable", "htmltools", "knitr", "MASS", "multcomp", "nlme", "polspline", "quantreg", "rpart", "SparseM", "survival"] + "depends": ["Hmisc", "MASS", "SparseM", "cluster", "colorspace", "digest", "ggplot2", "htmlTable", "htmltools", "knitr", "multcomp", "nlme", "polspline", "quantreg", "rpart", "survival"] }, "rmsb": { "name": "rmsb", - "version": "1.1-0", - "sha256": "1pwx9y1jppy7fvm7wr5gnxmjrcfzc1x9n5p2ybc5xisz1ymb2fdn", - "depends": ["BH", "cluster", "digest", "ggplot2", "Hmisc", "knitr", "loo", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "rms", "rstan", "StanHeaders", "survival"] + "version": "1.1-1", + "sha256": "1f33wv5bjqp59r4sdz8c3ckxhv4xz3clnsswpqxx6zagm7v572vp", + "depends": ["BH", "Hmisc", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cluster", "digest", "ggplot2", "knitr", "loo", "rms", "rstan", "survival"] }, "rmsfact": { "name": "rmsfact", @@ -103715,7 +104795,13 @@ "name": "rmsfuns", "version": "1.0.0.1", "sha256": "18bpj7xh3kc7pl6ivi3cripam26bsaf9r9099cjf22qndvy18hb6", - "depends": ["dplyr", "magrittr", "PerformanceAnalytics", "purrr", "readr", "tbl2xts", "xts", "zoo"] + "depends": ["PerformanceAnalytics", "dplyr", "magrittr", "purrr", "readr", "tbl2xts", "xts", "zoo"] + }, + "rmstBayespara": { + "name": "rmstBayespara", + "version": "0.1.0", + "sha256": "0qggmlf6li4sibb0lzzymm80242qnbivpiwd5yh35mcrwy820qsq", + "depends": ["brms", "crayon", "loo", "rstan", "zipfR"] }, "rmstcompsens": { "name": "rmstcompsens", @@ -103757,7 +104843,13 @@ "name": "rmzqc", "version": "0.5.4", "sha256": "18nyw4amg8l8hby3fpfbafz730g0bsk4xp31fgfhlv2qzcbm07aw", - "depends": ["jsonlite", "jsonvalidate", "knitr", "ontologyIndex", "R6", "R6P", "rmarkdown", "testthat"] + "depends": ["R6", "R6P", "jsonlite", "jsonvalidate", "knitr", "ontologyIndex", "rmarkdown", "testthat"] + }, + "rnaCrosslinkOO": { + "name": "rnaCrosslinkOO", + "version": "0.1.4", + "sha256": "06vv10hnq48mjp3kyjvzabjdgksa8xfjsh05nnbdrxm3c3ylv7id", + "depends": ["ClassDiscovery", "GenomicRanges", "IRanges", "MASS", "R4RNA", "RColorBrewer", "RRNA", "S4Vectors", "TopDom", "doParallel", "foreach", "ggplot2", "ggrepel", "heatmap3", "igraph", "mixtools", "patchwork", "reshape2", "seqinr", "tidyverse"] }, "rnames": { "name": "rnames", @@ -103793,7 +104885,7 @@ "name": "rncl", "version": "0.8.7", "sha256": "0flrqz7pansy11ds23qv06bcmh6vxqljq0517v6292ibbx7nx1qx", - "depends": ["progress", "Rcpp"] + "depends": ["Rcpp", "progress"] }, "rneos": { "name": "rneos", @@ -103829,7 +104921,7 @@ "name": "rnmamod", "version": "0.4.0", "sha256": "0gwx4mwrirricbfwlsfq9ckbn34w8dwy3d0c532s50vcwpd3dm1g", - "depends": ["cluster", "dendextend", "fdrtool", "gemtc", "ggfittext", "ggplot2", "ggpubr", "ggrepel", "heatmaply", "igraph", "knitr", "MASS", "mcmcplots", "R2jags", "reshape2", "scales", "stringr", "writexl"] + "depends": ["MASS", "R2jags", "cluster", "dendextend", "fdrtool", "gemtc", "ggfittext", "ggplot2", "ggpubr", "ggrepel", "heatmaply", "igraph", "knitr", "mcmcplots", "reshape2", "scales", "stringr", "writexl"] }, "rnn": { "name": "rnn", @@ -103841,13 +104933,13 @@ "name": "rnndescent", "version": "0.1.6", "sha256": "1qgmy4sqs14zbv1mm6cany6xxk0hsaaiblsd4am85qj8gbjflm3f", - "depends": ["BH", "dqrng", "Matrix", "Rcpp", "sitmo"] + "depends": ["BH", "Matrix", "Rcpp", "dqrng", "sitmo"] }, "rnpn": { "name": "rnpn", "version": "1.2.8.0", "sha256": "1svamnpfs76551cil1grch4nr6716j2qncdq7nqzp3ni5ia8522w", - "depends": ["curl", "data_table", "httr", "jsonlite", "magrittr", "plyr", "raster", "sp", "tibble", "XML"] + "depends": ["XML", "curl", "data_table", "httr", "jsonlite", "magrittr", "plyr", "raster", "sp", "tibble"] }, "rnr": { "name": "rnr", @@ -103857,8 +104949,8 @@ }, "rnrfa": { "name": "rnrfa", - "version": "2.1.0.5", - "sha256": "1fqfcj4z05p6lxc9708pbal7fkwhdqrm4c2cx2jb76s09rc840ci", + "version": "2.1.0.6", + "sha256": "0j3cl8sg2srqp2j3aaymq6m9yf7xr21np53ckjxa9dyv4kw11371", "depends": ["curl", "ggmap", "ggplot2", "httr", "jsonlite", "lubridate", "sf", "tibble", "zoo"] }, "roadoi": { @@ -103869,8 +104961,8 @@ }, "roads": { "name": "roads", - "version": "1.1.1", - "sha256": "0n0azkvpgiw0d649y7608izy9vp96vfbj27nr3vl6pi481w7ajcz", + "version": "1.2.0", + "sha256": "1hpa74mqihf90nv2q1bcmkc2xq0ay5i2jl4vq484nxgaicms69ws", "depends": ["data_table", "dplyr", "igraph", "rlang", "sf", "terra", "tidyselect", "units"] }, "roahd": { @@ -103883,19 +104975,19 @@ "name": "robCompositions", "version": "2.4.1", "sha256": "1kln6b95hjx3cyr9957ga7a5p6lnafn49q3pnb7vlvcw3p0zyhrf", - "depends": ["cluster", "cvTools", "data_table", "dplyr", "e1071", "fda", "fpc", "GGally", "ggfortify", "ggplot2", "kernlab", "magrittr", "MASS", "mclust", "pls", "Rcpp", "RcppEigen", "reshape2", "robustbase", "robustHD", "rrcov", "tidyr", "VIM", "zCompositions"] + "depends": ["GGally", "MASS", "Rcpp", "RcppEigen", "VIM", "cluster", "cvTools", "data_table", "dplyr", "e1071", "fda", "fpc", "ggfortify", "ggplot2", "kernlab", "magrittr", "mclust", "pls", "reshape2", "robustHD", "robustbase", "rrcov", "tidyr", "zCompositions"] }, "robStepSplitReg": { "name": "robStepSplitReg", "version": "1.1.0", "sha256": "04azi5pk8jpq5lcssbax8jyf1lb0g8grmxpj56kaifzp764y66wn", - "depends": ["cellWise", "glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "cellWise", "glmnet"] }, "robber": { "name": "robber", "version": "0.2.4", "sha256": "0db1cnf8f3f1i0mnp58cjq46cr0x6ffx6yzqnsdg6v7mwppdranb", - "depends": ["blockmodels", "ggplot2", "GREMLINS", "igraph", "magrittr", "pammtools", "partitions", "purrr"] + "depends": ["GREMLINS", "blockmodels", "ggplot2", "igraph", "magrittr", "pammtools", "partitions", "purrr"] }, "robcor": { "name": "robcor", @@ -103907,25 +104999,25 @@ "name": "roben", "version": "0.1.1", "sha256": "0ak3l17wmw2z0rgaymqczv40z8kqaflzzjj0fbdfcnskdik2ynfq", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] }, "robfilter": { "name": "robfilter", - "version": "4.1.4", - "sha256": "10wrfd2ii99vscnajjrd48msn4ka75pn7h9yhgclilc9l9r0q1wn", - "depends": ["lattice", "MASS", "robustbase"] + "version": "4.1.5", + "sha256": "18yqrwl60srr6r3hg6qcv8li91qz83xksvs383zs5bxa5y400azj", + "depends": ["MASS", "lattice", "robustbase"] }, "robflreg": { "name": "robflreg", "version": "1.2", "sha256": "1zhc2m8j4yzd5z54jx2lqks1bvvf4w0w3i7hr4hd46k8i3iy2cj2", - "depends": ["expm", "fda", "fda_usc", "fields", "goffda", "MASS", "mvtnorm", "pcaPP", "robustbase"] + "depends": ["MASS", "expm", "fda", "fda_usc", "fields", "goffda", "mvtnorm", "pcaPP", "robustbase"] }, "robin": { "name": "robin", - "version": "1.1.2", - "sha256": "1xzcq81a08mpj7nx11z8vq0g1w8jq2257glvm5jgzz9z4spcc0xz", - "depends": ["DescTools", "fdatest", "ggplot2", "gridExtra", "igraph", "Matrix", "networkD3", "qpdf", "spam"] + "version": "1.2.0", + "sha256": "0d61gibxs2cx6k8l4j0g8vcrprpa4m4242r9qcq5p3slr4hwrk2q", + "depends": ["BiocParallel", "DescTools", "Matrix", "fdatest", "ggplot2", "gridExtra", "igraph", "networkD3", "perturbR", "qpdf", "spam"] }, "robis": { "name": "robis", @@ -103949,13 +105041,13 @@ "name": "robmixglm", "version": "1.2-3", "sha256": "18xcbxj3jl9w5i74vy5i2ha7zsln4sgh8anv9n7haa7zilflvrx3", - "depends": ["actuar", "bbmle", "boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "MASS", "numDeriv", "Rcpp", "VGAM"] + "depends": ["MASS", "Rcpp", "VGAM", "actuar", "bbmle", "boot", "doParallel", "doRNG", "fastGHQuad", "foreach", "numDeriv"] }, "robnptests": { "name": "robnptests", "version": "1.1.0", "sha256": "0pc6g2apdcdrhpja6g922z03q92lcdydq9x85ii1slqpvla493k3", - "depends": ["checkmate", "gtools", "Rdpack", "robustbase", "statmod"] + "depends": ["Rdpack", "checkmate", "gtools", "robustbase", "statmod"] }, "roboBayes": { "name": "roboBayes", @@ -103973,7 +105065,7 @@ "name": "robotoolbox", "version": "1.3.2", "sha256": "0aj7819za3abw40rflvpwndf8i8gpmqmzb691km7shy9xq4sq48s", - "depends": ["cli", "crul", "data_table", "dm", "dplyr", "glue", "labelled", "purrr", "RcppSimdJson", "readr", "rlang", "stringi", "tibble", "tidyr", "tidyselect"] + "depends": ["RcppSimdJson", "cli", "crul", "data_table", "dm", "dplyr", "glue", "labelled", "purrr", "readr", "rlang", "stringi", "tibble", "tidyr", "tidyselect"] }, "robotstxt": { "name": "robotstxt", @@ -103991,13 +105083,13 @@ "name": "robregcc", "version": "1.1", "sha256": "06fapmc3jfrfdqvz02jr12dk1d5iw6s3mcb13jz1nm2bybw6r04a", - "depends": ["magrittr", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "magrittr"] }, "robsel": { "name": "robsel", "version": "0.1.0", "sha256": "0vf9hry11hf6bi4pz18c6gh9janx0v6shm2m14kckscvh80z3k5b", - "depends": ["glasso", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "glasso"] }, "robservable": { "name": "robservable", @@ -104023,29 +105115,35 @@ "sha256": "1lybq36p1n1z9p0iqiyzwmv5f07q1wlkqfgrnx9kjf6pwlp9mkyk", "depends": [] }, + "robusTest": { + "name": "robusTest", + "version": "1.1.0", + "sha256": "0iwjplmry7s5834gg1wrqcqpad93krrglh6m5dayv8s22mk83wsc", + "depends": ["Rcpp"] + }, "robust": { "name": "robust", - "version": "0.7-4", - "sha256": "0qh816ha18v0n021cccjan1kplmyj0xyb7jmkmrnb6gxf8kma3b3", - "depends": ["fit_models", "lattice", "MASS", "robustbase", "rrcov"] + "version": "0.7-5", + "sha256": "1k0s5i9r0lyz3qsw76dd514qclggqj9k2axmgj86df81j6f2mh53", + "depends": ["MASS", "fit_models", "lattice", "robustbase", "rrcov"] }, "robust2sls": { "name": "robust2sls", "version": "0.2.2", "sha256": "1q12lvb5kifcn6qjaw1zpzq8p59lw92x79jfj9ffgy3sswhznpq4", - "depends": ["exactci", "foreach", "ivreg", "MASS", "mathjaxr", "pracma"] + "depends": ["MASS", "exactci", "foreach", "ivreg", "mathjaxr", "pracma"] }, "robustBLME": { "name": "robustBLME", "version": "0.1.3", "sha256": "18wx116l1riy4wn4083kxl637mkyyi9wbwnmvhkgqw3vb36s4vxd", - "depends": ["doParallel", "foreach", "iterators", "lme4", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "iterators", "lme4", "mvtnorm", "numDeriv"] }, "robustDA": { "name": "robustDA", "version": "1.2", "sha256": "0kxdqvv17dgnlqp0hkazwfqsg3h4g9gw1w57blwpay67xp4d1jyx", - "depends": ["MASS", "mclust", "Rsolnp"] + "depends": ["MASS", "Rsolnp", "mclust"] }, "robustETM": { "name": "robustETM", @@ -104055,9 +105153,9 @@ }, "robustHD": { "name": "robustHD", - "version": "0.8.0", - "sha256": "16ihvb2v4i3ld3hx4vjkqc4fs07hnp8zi35pijcayxpp09bfk6s3", - "depends": ["ggplot2", "MASS", "perry", "Rcpp", "RcppArmadillo", "robustbase"] + "version": "0.8.1", + "sha256": "0f42x3r8g9nppfdd9vfqhq1ccj4sv8q1g7mdwlkmcyak3fajswcv", + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ggplot2", "perry", "robustbase"] }, "robustX": { "name": "robustX", @@ -104067,21 +105165,21 @@ }, "robustbase": { "name": "robustbase", - "version": "0.99-2", - "sha256": "0i6dzri3bfkpmp7h0h5nyzigs9rjzdd3c4ilapmvadmfywl9d9mn", + "version": "0.99-3", + "sha256": "11h0v9q44i8gl55q40aszmzn7214pljpzncgcws9pvgbypf17g31", "depends": ["DEoptimR"] }, "robustbetareg": { "name": "robustbetareg", "version": "0.3.0", "sha256": "09f4binbi5gcf80fhpxzrmpm2k2xf6f7rcw9g2xzmni8b4cs2l6p", - "depends": ["BBmisc", "betareg", "crayon", "Formula", "MASS", "Matrix", "miscTools", "numDeriv", "pracma", "Rmpfr", "robustbase", "rstudioapi", "zoo"] + "depends": ["BBmisc", "Formula", "MASS", "Matrix", "Rmpfr", "betareg", "crayon", "miscTools", "numDeriv", "pracma", "robustbase", "rstudioapi", "zoo"] }, "robustcov": { "name": "robustcov", "version": "0.1", "sha256": "1bgvf9h727aqfb11q976y2ybp3mpghkyd29waypyfp95csp3cf26", - "depends": ["caret", "glasso", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "caret", "glasso"] }, "robustfa": { "name": "robustfa", @@ -104099,7 +105197,7 @@ "name": "robustlmm", "version": "3.3-1", "sha256": "1rv08rxv0s2013hq196p4rnh3hh5gvcv8jw14sbh9lm1hzkj67rg", - "depends": ["fastGHQuad", "lattice", "lme4", "Matrix", "nlme", "Rcpp", "rlang", "robustbase", "xtable"] + "depends": ["Matrix", "Rcpp", "fastGHQuad", "lattice", "lme4", "nlme", "rlang", "robustbase", "xtable"] }, "robustmatrix": { "name": "robustmatrix", @@ -104135,7 +105233,7 @@ "name": "robustsae", "version": "0.1.0", "sha256": "0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl", - "depends": ["coda", "lattice", "MCMCpack", "mvtnorm", "pscl"] + "depends": ["MCMCpack", "coda", "lattice", "mvtnorm", "pscl"] }, "robustsur": { "name": "robustsur", @@ -104165,13 +105263,13 @@ "name": "rocTree", "version": "1.1.1", "sha256": "1hd5v47gymffg5829swpd38xscm4vq75d46fibwkrr7jp9iy37ra", - "depends": ["data_tree", "DiagrammeR", "flexsurv", "ggplot2", "MASS", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["DiagrammeR", "MASS", "Rcpp", "RcppArmadillo", "data_tree", "flexsurv", "ggplot2", "survival"] }, "rocbc": { "name": "rocbc", "version": "3.1.0", "sha256": "1c2lbh3zmgzi87irbrxx8bdvvnz9ck24839nci00ylh8dvwq8893", - "depends": ["clinfun", "formattable", "MRMCaov", "mvtnorm", "pracma", "pROC", "splancs"] + "depends": ["MRMCaov", "clinfun", "formattable", "mvtnorm", "pROC", "pracma", "splancs"] }, "rocc": { "name": "rocc", @@ -104189,13 +105287,13 @@ "name": "rock", "version": "0.8.1", "sha256": "04byjz2k1wnjxbj22b307ghdrp7zz2ik5cxkxa0v980isfq5dv9i", - "depends": ["data_tree", "DiagrammeR", "DiagrammeRsvg", "dplyr", "ggplot2", "glue", "htmltools", "markdown", "purrr", "yaml", "yum"] + "depends": ["DiagrammeR", "DiagrammeRsvg", "data_tree", "dplyr", "ggplot2", "glue", "htmltools", "markdown", "purrr", "yaml", "yum"] }, "rockchalk": { "name": "rockchalk", "version": "1.8.157", "sha256": "13g2rdnxazqfgy653d7vj6w79b2vgnd7bbz0sqn9k4qiig59jh41", - "depends": ["carData", "kutils", "lme4", "MASS"] + "depends": ["MASS", "carData", "kutils", "lme4"] }, "rocker": { "name": "rocker", @@ -104241,15 +105339,15 @@ }, "rodeo": { "name": "rodeo", - "version": "0.7.8", - "sha256": "0sqds225bvnw1z6a36f14fck0jnaa0ilz2n8ylkw6j5f7dx1yf0n", - "depends": ["deSolve", "R6"] + "version": "0.8.2", + "sha256": "14bs944nn7avb06j7xb24qphr09n2i011skfdgqgybm9q5dxawpk", + "depends": ["R6", "deSolve", "readODS", "readxl"] }, "rofanova": { "name": "rofanova", "version": "1.0.0", "sha256": "0w8c5c5q0s2qv1b4nxgf8y1z3g0l9c6jr6i0280b5mp9in9wn8a6", - "depends": ["abind", "fda_usc", "Rcpp", "RcppArmadillo", "robustbase"] + "depends": ["Rcpp", "RcppArmadillo", "abind", "fda_usc", "robustbase"] }, "roger": { "name": "roger", @@ -104313,8 +105411,8 @@ }, "rolog": { "name": "rolog", - "version": "0.9.17", - "sha256": "1h69xgj1gx8w8vrkrnwpcs1cakz08k8c9fzdh62bxbk512y7p5za", + "version": "0.9.18", + "sha256": "0wdz2mnmih0hxrylqnrqrzgpwji3gi7mxzk9h60idfpwdhgc1krq", "depends": ["Rcpp", "rswipl"] }, "rolr": { @@ -104351,7 +105449,7 @@ "name": "ropenblas", "version": "0.3.0", "sha256": "161k0mjsbwyr4670cab546lxx9car9spc9qsjqcz8q9lj42rfyvn", - "depends": ["cli", "fs", "getPass", "git2r", "glue", "magrittr", "pingr", "RCurl", "rlang", "rstudioapi", "rvest", "stringr", "withr", "XML"] + "depends": ["RCurl", "XML", "cli", "fs", "getPass", "git2r", "glue", "magrittr", "pingr", "rlang", "rstudioapi", "rvest", "stringr", "withr"] }, "ropendata": { "name": "ropendata", @@ -104375,7 +105473,7 @@ "name": "ropercenter", "version": "0.3.2", "sha256": "13h1bd54xasryixnkv59zb0lfyya0bl4i83544a5nws6zzy7dsyz", - "depends": ["dplyr", "foreign", "haven", "magrittr", "netstat", "purrr", "readr", "rio", "RSelenium", "stringr", "tibble", "tidyr"] + "depends": ["RSelenium", "dplyr", "foreign", "haven", "magrittr", "netstat", "purrr", "readr", "rio", "stringr", "tibble", "tidyr"] }, "roptim": { "name": "roptim", @@ -104435,7 +105533,7 @@ "name": "rosv", "version": "0.5.1", "sha256": "1xgmn2n9iryijp36a7vzyaylc21wmfv2gjqn0qwa57hwy30f1wbw", - "depends": ["digest", "furrr", "httr2", "jsonlite", "memoise", "purrr", "R6"] + "depends": ["R6", "digest", "furrr", "httr2", "jsonlite", "memoise", "purrr"] }, "rotasym": { "name": "rotasym", @@ -104453,7 +105551,7 @@ "name": "rotations", "version": "1.6.5", "sha256": "1gcwz9aq99w54pq03i164kqa0dnf68rkd3ch3l7m97ndf32lawwk", - "depends": ["ggplot2", "gridExtra", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra"] }, "rotatogram": { "name": "rotatogram", @@ -104471,7 +105569,7 @@ "name": "rotor", "version": "0.3.7", "sha256": "02mzcwd94hykysz3cv0q3dlhbbd4k3rm1di7dcw6m4masgzy05zb", - "depends": ["dint", "R6"] + "depends": ["R6", "dint"] }, "roughnet": { "name": "roughnet", @@ -104507,7 +105605,7 @@ "name": "routr", "version": "0.4.1", "sha256": "0sqllafwxqlkf8bl5nc3fpf17aqg5nbimrmc8l3z95y3gwhnqhkb", - "depends": ["assertthat", "digest", "R6", "reqres", "stringi", "uuid"] + "depends": ["R6", "assertthat", "digest", "reqres", "stringi", "uuid"] }, "roxut": { "name": "roxut", @@ -104517,9 +105615,9 @@ }, "roxygen2": { "name": "roxygen2", - "version": "7.3.1", - "sha256": "1j72arkadw93f4wrzxhryn3666jwnablr1bhk0zv6g77q2lrypi1", - "depends": ["brew", "cli", "commonmark", "cpp11", "desc", "knitr", "pkgload", "purrr", "R6", "rlang", "stringi", "stringr", "withr", "xml2"] + "version": "7.3.2", + "sha256": "0701v8dglv0mdsjs1mijpylpciiijb2schplavkf5drjj6gqg25p", + "depends": ["R6", "brew", "cli", "commonmark", "cpp11", "desc", "knitr", "pkgload", "purrr", "rlang", "stringi", "stringr", "withr", "xml2"] }, "roxygen2md": { "name": "roxygen2md", @@ -104555,7 +105653,7 @@ "name": "rpact", "version": "4.0.0", "sha256": "1mwsy5y917sihyq3i001hzz98zx5zvm8042inv072vxik2pybngc", - "depends": ["knitr", "R6", "Rcpp", "rlang"] + "depends": ["R6", "Rcpp", "knitr", "rlang"] }, "rpaleoclim": { "name": "rpaleoclim", @@ -104599,17 +105697,11 @@ "sha256": "135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z", "depends": [] }, - "rpdo": { - "name": "rpdo", - "version": "0.3.2", - "sha256": "0sh52y7hmnm9qhyp0m6vp3c23wzz3ds8j577z105s6f3pdf398l0", - "depends": ["chk", "lifecycle"] - }, "rpf": { "name": "rpf", "version": "1.0.14", "sha256": "15pp6fdqxngsmcibxfzv72g25q3ww3hrazsl4c5fgi0fh450kfz4", - "depends": ["lifecycle", "mvtnorm", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "lifecycle", "mvtnorm"] }, "rphylopic": { "name": "rphylopic", @@ -104629,6 +105721,12 @@ "sha256": "0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5", "depends": ["htmlwidgets"] }, + "rplanes": { + "name": "rplanes", + "version": "0.1.0", + "sha256": "1pv45g55rgsgjljqlz8sb3q4iimn1921ibihmlf32myilnavs87b", + "depends": ["dplyr", "dtw", "ecp", "lubridate", "magrittr", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr"] + }, "rplotengine": { "name": "rplotengine", "version": "1.0-9", @@ -104651,12 +105749,12 @@ "name": "rpm", "version": "0.7-3", "sha256": "1bzlvyrjib7wgv57didcqmlvzv4skp587jmn7vpfwpqb4lkp7ia1", - "depends": ["abind", "coda", "doFuture", "doRNG", "dplyr", "foreach", "future", "ggplot2", "MASS", "matrixStats", "nloptr", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "abind", "coda", "doFuture", "doRNG", "dplyr", "foreach", "future", "ggplot2", "matrixStats", "nloptr"] }, "rpmodel": { "name": "rpmodel", - "version": "1.2.0", - "sha256": "131kzag51r1fpa63xzj77b9hh4b1723lc424ch8dhbrcdrnjh730", + "version": "1.2.3", + "sha256": "1vpgc38waijd670pydankq0vqz53zi3jxj8621xxg3wiwga91sl3", "depends": [] }, "rpms": { @@ -104681,19 +105779,19 @@ "name": "rpostgis", "version": "1.5.1", "sha256": "1fnizm0xb7div6mrg3s9a4mv8dbm6lrq9azjxi786261jmv3dbvg", - "depends": ["DBI", "purrr", "raster", "RPostgreSQL", "sf", "sp", "terra"] + "depends": ["DBI", "RPostgreSQL", "purrr", "raster", "sf", "sp", "terra"] }, "rpql": { "name": "rpql", "version": "0.8.1", "sha256": "065mkdfrhs7jmkwyvkydic04snih1wb18xshddll1r5kam4ixvn2", - "depends": ["gamlss_dist", "lme4", "MASS", "Matrix", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "gamlss_dist", "lme4", "mvtnorm"] }, "rpredictit": { "name": "rpredictit", "version": "0.1.0", "sha256": "0azq75fhjadchc4pxgs4pccpvskc508zhggxxb7ab012nysap027", - "depends": ["dplyr", "DT", "dygraphs", "httr", "jsonlite", "magrittr", "quantmod", "shiny", "xts"] + "depends": ["DT", "dplyr", "dygraphs", "httr", "jsonlite", "magrittr", "quantmod", "shiny", "xts"] }, "rprev": { "name": "rprev", @@ -104747,19 +105845,25 @@ "name": "rpyANTs", "version": "0.0.3", "sha256": "1dmlpwx9x1gh2x0a4krp0v5a4km7pp65zalvbibb6r69iqmqr858", - "depends": ["reticulate", "RNifti", "rpymat"] + "depends": ["RNifti", "reticulate", "rpymat"] }, "rpymat": { "name": "rpymat", "version": "0.1.7", "sha256": "0zrq4j0xw4blv9bsdrnkf0wb61bsm1lrlh92a2qw8p3daa48833q", - "depends": ["fastmap", "glue", "IRkernel", "jsonlite", "rappdirs", "reticulate", "rstudioapi"] + "depends": ["IRkernel", "fastmap", "glue", "jsonlite", "rappdirs", "reticulate", "rstudioapi"] }, "rqPen": { "name": "rqPen", "version": "4.1.1", "sha256": "112x6y6ykmd1isw19xdpzn8alf5llz6jp7l5pfi6vp22w27z852w", - "depends": ["data_table", "hqreg", "hrqglas", "lifecycle", "Matrix", "plyr", "quantreg", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "Rdpack", "data_table", "hqreg", "hrqglas", "lifecycle", "plyr", "quantreg"] + }, + "rqcanon": { + "name": "rqcanon", + "version": "0.1.0", + "sha256": "17h5bsi2iqhfjm4mdi65ni2qi8n8dm4g5wgmgg50g1kv07n18l9s", + "depends": ["quantreg"] }, "rqdatatable": { "name": "rqdatatable", @@ -104775,8 +105879,8 @@ }, "rqti": { "name": "rqti", - "version": "0.2.1", - "sha256": "0waayqsqwydd3mv5zplbivqspxnkdznq47mj8v5yyzf28042aax7", + "version": "0.3.0", + "sha256": "12jx51cvc7d9plmvjsrnkcgaadhn8hdxc5l3fqm592wd6sfw3l6x", "depends": ["curl", "digest", "fs", "getPass", "htmltools", "httr2", "kableExtra", "keyring", "knitr", "lubridate", "magrittr", "rmarkdown", "rstudioapi", "servr", "stringr", "textutils", "xml2", "yaml", "zip"] }, "rquery": { @@ -104789,13 +105893,13 @@ "name": "rr", "version": "1.4.2", "sha256": "1xzyys6hjh01iy66a63sxda502pr4jr79pz0kcml9vgaqwf16bdp", - "depends": ["arm", "coda", "magic", "MASS"] + "depends": ["MASS", "arm", "coda", "magic"] }, "rr2": { "name": "rr2", "version": "1.1.1", "sha256": "0c80zl8qyfd4fdvxp381vixfr8q2dxzn2j7siqawf0dbbvxpdr73", - "depends": ["ape", "lme4", "Matrix", "nlme", "phylolm", "phyr"] + "depends": ["Matrix", "ape", "lme4", "nlme", "phylolm", "phyr"] }, "rrBLUP": { "name": "rrBLUP", @@ -104807,18 +105911,18 @@ "name": "rrMixture", "version": "0.1-2", "sha256": "0bh63v9zis8w3ylvbc99iy2hx0wn6302d49bhcw3wr7wmbzvdi8s", - "depends": ["gtools", "MASS", "Matrix", "matrixcalc", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "gtools", "matrixcalc"] }, "rrandvec": { "name": "rrandvec", "version": "1.0.0", "sha256": "0n92wm95xjng2j93a055mliph2cmialmcpm9b45jf75zqdhzizp5", - "depends": ["checkmate", "Rcpp"] + "depends": ["Rcpp", "checkmate"] }, "rrapply": { "name": "rrapply", - "version": "1.2.6", - "sha256": "05shia32hs6y739dfk35y671c8nrifhb415mn3sdg4v065j2k1jc", + "version": "1.2.7", + "sha256": "04qzfkf011fvvc3ll8qcn300d63z2p2p7qri24ylrsyl5g0v1w9i", "depends": [] }, "rrat": { @@ -104837,25 +105941,25 @@ "name": "rrcov3way", "version": "0.5-0", "sha256": "1n4wjxb5irgsm9yfhg5aav161ca2s1cgzhggxgf8xxyy1yw3xnk0", - "depends": ["nnls", "pracma", "robustbase", "rrcov", "ThreeWay"] + "depends": ["ThreeWay", "nnls", "pracma", "robustbase", "rrcov"] }, "rrcovHD": { "name": "rrcovHD", - "version": "0.3-0", - "sha256": "13g2akydz05933jv9fgc8jpqi8lcm506pcrdpjs88yapb4p5ar4j", - "depends": ["pcaPP", "pls", "Rcpp", "robustbase", "robustHD", "rrcov", "spls"] + "version": "0.3-1", + "sha256": "0ybj4lqfn27a1f0k434my6plk8zh6xmfgfmyavpl01pb16f7c30m", + "depends": ["Rcpp", "pcaPP", "pls", "robustHD", "robustbase", "rrcov", "spls"] }, "rrcovNA": { "name": "rrcovNA", - "version": "0.5-1", - "sha256": "0bf3r5j37pfv84fmmgsaq4ddrq7f290w8673fapqrirci7dnawxc", + "version": "0.5-2", + "sha256": "1hp6cji9w38qq00bb0jyx0s2lh74960qciwhbc1vdiv5dfg38qmx", "depends": ["cluster", "lattice", "norm", "robustbase", "rrcov"] }, "rrecsys": { "name": "rrecsys", "version": "0.9.7.3.1", "sha256": "1qnjriv1xq4gjjhzz8jxrbk88mw5xddl2l2i4bmfhnxhi51d2rk3", - "depends": ["ggplot2", "knitr", "MASS", "Rcpp", "registry"] + "depends": ["MASS", "Rcpp", "ggplot2", "knitr", "registry"] }, "rredlist": { "name": "rredlist", @@ -104885,7 +105989,7 @@ "name": "rres", "version": "1.1", "sha256": "138m26ya119805b1akwski0hf1ypiqsqjlkrm9p0l2x22zrv1n60", - "depends": ["kernlab", "Rcpp"] + "depends": ["Rcpp", "kernlab"] }, "rriskDistributions": { "name": "rriskDistributions", @@ -104909,19 +106013,19 @@ "name": "rrpack", "version": "0.1-13", "sha256": "0h9m2gsi16zxdhff02fxa6r4kw32m7vs3y6ikwpczhlnxd0d0qjy", - "depends": ["ggplot2", "glmnet", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "ggplot2", "glmnet"] }, "rrr": { "name": "rrr", "version": "1.0.0", "sha256": "0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz", - "depends": ["dplyr", "GGally", "ggplot2", "magrittr", "MASS", "plotly", "Rcpp"] + "depends": ["GGally", "MASS", "Rcpp", "dplyr", "ggplot2", "magrittr", "plotly"] }, "rrscale": { "name": "rrscale", "version": "1.0", "sha256": "1s8ziwh95410i9p176xbsk9k6ccyihi2mqa5gaigcqrkb3dzyy08", - "depends": ["abind", "DEoptim", "nloptr"] + "depends": ["DEoptim", "abind", "nloptr"] }, "rrtable": { "name": "rrtable", @@ -104951,12 +106055,12 @@ "name": "rsat", "version": "0.1.21", "sha256": "1fi2xy9q49w77b0xgqqny8y5v53jxybdpysv0mw4nlfq0q8glvgx", - "depends": ["calendR", "curl", "fields", "httr", "leafem", "leaflet", "raster", "Rdpack", "rjson", "rvest", "sf", "sp", "stars", "terra", "tmap", "XML", "xml2", "zip"] + "depends": ["Rdpack", "XML", "calendR", "curl", "fields", "httr", "leafem", "leaflet", "raster", "rjson", "rvest", "sf", "sp", "stars", "terra", "tmap", "xml2", "zip"] }, "rsatscan": { "name": "rsatscan", - "version": "1.0.7", - "sha256": "14q568xyigjsq8g98y393ln7m45bnrf3sy201mi7432wzxjl6ia8", + "version": "1.0.8", + "sha256": "018958mln4gfqk9xmiqma2gp5drysf9z17ilraf4wlaxi7dm7qf6", "depends": ["foreign"] }, "rscc": { @@ -104969,7 +106073,7 @@ "name": "rsconnect", "version": "1.3.1", "sha256": "0msmrdw7933xics464asyy9v2gm5b4jb8gr4nfhy54x45n1qmpj7", - "depends": ["cli", "curl", "digest", "jsonlite", "lifecycle", "openssl", "packrat", "PKI", "renv", "rlang", "rstudioapi", "yaml"] + "depends": ["PKI", "cli", "curl", "digest", "jsonlite", "lifecycle", "openssl", "packrat", "renv", "rlang", "rstudioapi", "yaml"] }, "rscontract": { "name": "rscontract", @@ -105005,7 +106109,7 @@ "name": "rsdmx", "version": "0.6-3", "sha256": "0axy02p6kh67sc1nqp67sa1i2n3r24j1cdd3lczxzfkxms0qznc7", - "depends": ["httr", "plyr", "R6", "XML"] + "depends": ["R6", "XML", "httr", "plyr"] }, "rseedcalc": { "name": "rseedcalc", @@ -105017,13 +106121,13 @@ "name": "rsem", "version": "0.5.1", "sha256": "1rzfshfmhicpm45xmmsbns1qkb9p7m5mj0nwcnl7arlmlik4jn4p", - "depends": ["lavaan", "MASS"] + "depends": ["MASS", "lavaan"] }, "rsetse": { "name": "rsetse", "version": "0.5.0", "sha256": "095f37a48l9dhz5s3zri6y1kv74x150wrrxinrh177mi3m63shgr", - "depends": ["dplyr", "igraph", "magrittr", "Matrix", "minpack_lm", "purrr", "rlang", "tibble"] + "depends": ["Matrix", "dplyr", "igraph", "magrittr", "minpack_lm", "purrr", "rlang", "tibble"] }, "rsf": { "name": "rsf", @@ -105031,12 +106135,6 @@ "sha256": "0vlnmqj6if2d8m4frdyarc985s73zapsj74rjv1nv074z422l2ci", "depends": ["bookdown", "gert", "here", "knitr", "magrittr", "renv", "rlang", "usethis", "yaml", "ymlthis"] }, - "rsgeo": { - "name": "rsgeo", - "version": "0.1.6", - "sha256": "04mv8ifl1k2vqacglw0j41j96l9ls8khiligjhk499c5zg4aadip", - "depends": ["rlang", "vctrs"] - }, "rshift": { "name": "rshift", "version": "3.0.0", @@ -105045,15 +106143,15 @@ }, "rsi": { "name": "rsi", - "version": "0.2.0", - "sha256": "1r6igxar0mbnqscnrp7mq98isi40njiwf8377rk2qpyq69108v7h", + "version": "0.2.1", + "sha256": "03vipq6ykq5px705r1ixaj02770rh6wpmk0zjw73zr04dzrg878n", "depends": ["future_apply", "glue", "httr", "jsonlite", "lifecycle", "proceduralnames", "rlang", "rstac", "sf", "terra", "tibble"] }, "rsides": { "name": "rsides", "version": "0.1", "sha256": "08vwk7d7p6m38gmnbmx50kb44jhxdxvq6pbm6ym66ifhlxmbigr1", - "depends": ["BH", "doParallel", "doRNG", "flextable", "foreach", "officer", "Rcpp", "RcppEigen", "survival", "xml2"] + "depends": ["BH", "Rcpp", "RcppEigen", "doParallel", "doRNG", "flextable", "foreach", "officer", "survival", "xml2"] }, "rsimsum": { "name": "rsimsum", @@ -105063,8 +106161,8 @@ }, "rsinaica": { "name": "rsinaica", - "version": "1.0.0", - "sha256": "0ndskcgzd38mblk3xfazszhh3f5fjlmz6rmc297nka2c8rw56lz2", + "version": "1.1.0", + "sha256": "00fnz0afa635zbkphc92wbwzarxa5dnvxy2g4gry43zykq1m3wgd", "depends": ["dplyr", "httr", "jsonlite", "lubridate", "stringr"] }, "rskey": { @@ -105095,7 +106193,7 @@ "name": "rsmatch", "version": "0.2.1", "sha256": "0fncr8gakhldnvlzyv2sb2cqz3ninnwa353l8vvxvy122lnjlwbz", - "depends": ["dplyr", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "dplyr"] }, "rsmatrix": { "name": "rsmatrix", @@ -105125,7 +106223,7 @@ "name": "rsolr", "version": "0.0.13", "sha256": "1pky70f4w44xaz57ricq40c950l443q693h0wfvk684wcvgnga0s", - "depends": ["BiocGenerics", "graph", "RCurl", "restfulr", "rjson", "S4Vectors", "XML"] + "depends": ["BiocGenerics", "RCurl", "S4Vectors", "XML", "graph", "restfulr", "rjson"] }, "rspa": { "name": "rspa", @@ -105141,20 +106239,20 @@ }, "rsparse": { "name": "rsparse", - "version": "0.5.1", - "sha256": "15kdllm2lh6xdlv4j0ljyj5pczhx26s9d8cac7953zbb0sd45chz", - "depends": ["data_table", "float", "lgr", "Matrix", "MatrixExtra", "Rcpp", "RcppArmadillo", "RhpcBLASctl"] + "version": "0.5.2", + "sha256": "0a40mhbzlakjsf6wj00p8pqr6slhn7gxsgq2rycp3yg478ajwqyp", + "depends": ["Matrix", "MatrixExtra", "Rcpp", "RcppArmadillo", "RhpcBLASctl", "data_table", "float", "lgr"] }, "rspiro": { "name": "rspiro", - "version": "0.4", - "sha256": "1k91zdph8inkdyafz73lacbgq8x7rp55407rkpnr7nf0sbshxrr2", + "version": "0.5", + "sha256": "0vwbgrgdgvj52y290rh70c1hwfi1sa915qpss400r5405j8sgvkw", "depends": [] }, "rspm": { "name": "rspm", - "version": "0.5.3", - "sha256": "0zl3mpr1k40jfhx45xhjvwr4p7qpyxnaphrc5mbjypflaxcns4ym", + "version": "0.6.0", + "sha256": "0jr4zqz0jw8i5zvp8sf5irsz08sbcs8d8jdvqlda9ajv42qmqhna", "depends": [] }, "rsppfp": { @@ -105167,18 +106265,18 @@ "name": "rsprite2", "version": "0.2.1", "sha256": "1j1v9d5h2p9574zsl8gi4lkmq1yblklmpd40fd19bw1p67fqhpm0", - "depends": ["checkmate", "Rdpack"] + "depends": ["Rdpack", "checkmate"] }, "rsq": { "name": "rsq", "version": "2.6", "sha256": "01b9rl2ng1sq0ibpfsf50agkwh01pfpw354vvgdjd0lzh9dxmsgp", - "depends": ["deming", "Deriv", "lme4", "MASS", "Matrix", "nlme"] + "depends": ["Deriv", "MASS", "Matrix", "deming", "lme4", "nlme"] }, "rstac": { "name": "rstac", - "version": "1.0.0", - "sha256": "0ivd7ahaynfwz5w1cr2qvz2bhjx710pgj533gi8l9akln59fqzzf", + "version": "1.0.1", + "sha256": "024av3pl9xgd45fr7lxd2y09nbgkjs0rp0rl91lgsvzvgr5qc8q6", "depends": ["crayon", "httr", "jpeg", "jsonlite", "magrittr", "png", "sf"] }, "rstack": { @@ -105197,31 +106295,31 @@ "name": "rstan", "version": "2.32.6", "sha256": "0w0si8sd26c4nivqh85y0imil14sp4vy97yikmrv1lxvj40x141k", - "depends": ["BH", "ggplot2", "gridExtra", "inline", "loo", "pkgbuild", "QuickJSR", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders"] + "depends": ["BH", "QuickJSR", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "gridExtra", "inline", "loo", "pkgbuild"] }, "rstanarm": { "name": "rstanarm", "version": "2.32.1", "sha256": "1pj3s8yy8dwxfnxsd5rzd1hc7997bh5mg66zs83ljpbl0xi6qvaw", - "depends": ["bayesplot", "BH", "ggplot2", "lme4", "loo", "Matrix", "nlme", "posterior", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "shinystan", "StanHeaders", "survival"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "ggplot2", "lme4", "loo", "nlme", "posterior", "rstan", "rstantools", "shinystan", "survival"] }, "rstanbdp": { "name": "rstanbdp", - "version": "0.0.2", - "sha256": "0244gbi449nd5q80i1y0k56114c6x9a8k83hvbbc5ny10lmn980j", - "depends": ["bayestestR", "BH", "KernSmooth", "mixtools", "Rcpp", "RcppEigen", "RcppParallel", "rrcov", "rstan", "rstantools", "StanHeaders"] + "version": "0.0.3", + "sha256": "1cd411qjw3qc9klihxya75r948ii3i2gpy0yjab6b2ci19fwcy6a", + "depends": ["BH", "KernSmooth", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "bayestestR", "mixtools", "rrcov", "rstan", "rstantools"] }, "rstanemax": { "name": "rstanemax", "version": "0.1.5", "sha256": "0n15dw6bz7g5j5dng32zna1r4p4ywkmspc82q1b3lcg3zbjmda3f", - "depends": ["BH", "dplyr", "ggplot2", "magrittr", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "ggplot2", "magrittr", "purrr", "rstan", "rstantools", "tidyr"] }, "rstantools": { "name": "rstantools", "version": "2.4.0", "sha256": "1ajg7g425cmw9h9a8225szmacwyvdwl3x0k851fnqb1my2i2rxxz", - "depends": ["desc", "Rcpp", "RcppParallel"] + "depends": ["Rcpp", "RcppParallel", "desc"] }, "rstatix": { "name": "rstatix", @@ -105245,7 +106343,7 @@ "name": "rstpm2", "version": "1.6.3", "sha256": "07q3n9hv8azwiipggyb6ykhvb8qy10s4nkp5irv76d54fsl7jq2y", - "depends": ["bbmle", "BH", "deSolve", "fastGHQuad", "mgcv", "mvtnorm", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "bbmle", "deSolve", "fastGHQuad", "mgcv", "mvtnorm", "survival"] }, "rstream": { "name": "rstream", @@ -105281,13 +106379,13 @@ "name": "rsurv", "version": "0.0.1", "sha256": "1xin45sc6zlap0w2ydq0ji4w3kz4ksvhark7vgim6vb1d1zv3py0", - "depends": ["dplyr", "Rdpack", "stabledist"] + "depends": ["Rdpack", "dplyr", "stabledist"] }, "rsurveycto": { "name": "rsurveycto", - "version": "0.1.6", - "sha256": "1w9xg2qcgqachc8y24vqxgw701si5g9qb5ps68lrn4w33hbywzjl", - "depends": ["checkmate", "cli", "curl", "data_table", "glue", "httr", "jsonlite", "rlang", "withr"] + "version": "0.2.0", + "sha256": "10ahwi1xiy2gw3abj6scrp1qdlqg3js4h9q2z6d7a5vwaxpz95hh", + "depends": ["checkmate", "cli", "curl", "data_table", "glue", "httr", "jsonlite", "lifecycle", "readxl", "rlang", "vctrs", "withr"] }, "rsvd": { "name": "rsvd", @@ -105299,7 +106397,7 @@ "name": "rsvddpd", "version": "1.0.0", "sha256": "0p2cpv3ipkvl27zhncpcyxp6lqw54ncdnxyk659qc24l0fqbw7dc", - "depends": ["MASS", "matrixStats", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "matrixStats"] }, "rsvg": { "name": "rsvg", @@ -105309,15 +106407,15 @@ }, "rswipl": { "name": "rswipl", - "version": "9.3.5.1", - "sha256": "07l9vrjn4cfzz517sqn9q7aj4026b2bqbqm15agr2211z3ppjfmz", + "version": "9.3.7.2", + "sha256": "1wyyvv8nrgfk811vbsixyiyhz0yq65bls420d5fl9rrcwzdv3rkj", "depends": ["Rcpp"] }, "rsyncrosim": { "name": "rsyncrosim", "version": "1.5.0", "sha256": "0pg7i40m8qjcfwamb9prhkzyf4571jgnamqibxzd35n6vm6s9npy", - "depends": ["DBI", "gtools", "lifecycle", "RSQLite", "terra"] + "depends": ["DBI", "RSQLite", "gtools", "lifecycle", "terra"] }, "rsyntax": { "name": "rsyntax", @@ -105351,9 +106449,9 @@ }, "rtables": { "name": "rtables", - "version": "0.6.7", - "sha256": "0x0wnv3zscbb4csgg656518krc88pqss7pd40n61q474mf6jj5s7", - "depends": ["checkmate", "formatters", "htmltools", "magrittr", "stringi"] + "version": "0.6.9", + "sha256": "137c8ks15v1w19a3g7pvnwabzpj1vj277r46npr6ymr90ddb5ha7", + "depends": ["checkmate", "formatters", "htmltools", "lifecycle", "magrittr", "stringi"] }, "rtape": { "name": "rtape", @@ -105365,19 +106463,19 @@ "name": "rtdists", "version": "0.11-5", "sha256": "1v8yhyvliw3dm3ciwxxaa9spfw05wp334l7gmvgv20mab2kjxkwp", - "depends": ["evd", "gsl", "msm", "Rcpp"] + "depends": ["Rcpp", "evd", "gsl", "msm"] }, "rtematres": { "name": "rtematres", "version": "0.2", "sha256": "1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2", - "depends": ["gdata", "plyr", "RCurl", "XML"] + "depends": ["RCurl", "XML", "gdata", "plyr"] }, "rtemps": { "name": "rtemps", "version": "0.8.0", "sha256": "1x64j13g1lv0s7yy1b4453l7xnscgf079hkgkp8dv9c38g0mfx98", - "depends": ["bookdown", "DT", "ggplot2", "knitr", "rmarkdown", "xfun"] + "depends": ["DT", "bookdown", "ggplot2", "knitr", "rmarkdown", "xfun"] }, "rtern": { "name": "rtern", @@ -105425,7 +106523,7 @@ "name": "rties", "version": "5.0.0", "sha256": "1mxgzrlf41hhawab2664az151fmmhm8ivnnimmzm538yliilc0b7", - "depends": ["DataCombine", "DescTools", "deSolve", "dplyr", "ggplot2", "gridExtra", "interactions", "lattice", "lme4", "MASS", "mclust", "nlme", "nnet", "plyr", "zoo"] + "depends": ["DataCombine", "DescTools", "MASS", "deSolve", "dplyr", "ggplot2", "gridExtra", "interactions", "lattice", "lme4", "mclust", "nlme", "nnet", "plyr", "zoo"] }, "rtika": { "name": "rtika", @@ -105455,7 +106553,7 @@ "name": "rtkore", "version": "1.6.12", "sha256": "10mwa5m6papd6a3vx7zb36fy93wjkhzyxgcvi3i88lslh5hsccnm", - "depends": ["inline", "Rcpp"] + "depends": ["Rcpp", "inline"] }, "rtlr": { "name": "rtlr", @@ -105467,7 +106565,7 @@ "name": "rtmpt", "version": "2.0-1", "sha256": "0isd7vwr1qbyzym0awmgb38fiix8v8r46ckl0d24q0hqls3aydz5", - "depends": ["coda", "data_table", "loo", "Ryacas", "stringr", "truncnorm"] + "depends": ["Ryacas", "coda", "data_table", "loo", "stringr", "truncnorm"] }, "rtms": { "name": "rtms", @@ -105495,21 +106593,21 @@ }, "rtpcr": { "name": "rtpcr", - "version": "1.0.9", - "sha256": "0pwwkcgzhmhdc5fic8h623w1qggmaa3cb1li6vprsxi4k5diq44c", + "version": "2.0.0", + "sha256": "17jbwyi19h5x9sbn14rgpbp2c23qi4w3jxdsvscrbhfrmckwfj90", "depends": ["dplyr", "emmeans", "ggplot2", "lmerTest", "multcomp", "multcompView", "purrr", "reshape2", "tidyr"] }, "rtrek": { "name": "rtrek", - "version": "0.4.0", - "sha256": "0w5726mjy8yf9h1kk3snqc4rqbg6b55ybvkbk5xqnp5iarnsd7v4", - "depends": ["downloader", "dplyr", "ggplot2", "jpeg", "jsonlite", "memoise", "purrr", "rvest", "tibble", "tidyr", "xml2"] + "version": "0.5.0", + "sha256": "0sra9v02vh6x8jydgibd2962f9nkzbdx02r4gn9b6qsirgsgn502", + "depends": ["downloader", "dplyr", "ggplot2", "jpeg", "jsonlite", "memoise", "png", "purrr", "rvest", "tibble", "tidyr", "xml2"] }, "rtrend": { "name": "rtrend", "version": "0.1.5", "sha256": "03spmnqbydwfv0nx0rmp6pj67y8vxaqwaj2c76jrrk5qmjvpjkc1", - "depends": ["boot", "fftwtools", "lubridate", "magrittr", "matrixStats", "plyr", "Rcpp", "RcppArmadillo", "terra"] + "depends": ["Rcpp", "RcppArmadillo", "boot", "fftwtools", "lubridate", "magrittr", "matrixStats", "plyr", "terra"] }, "rtrends": { "name": "rtrends", @@ -105517,6 +106615,12 @@ "sha256": "04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1", "depends": ["dplyr", "lubridate", "tidyr"] }, + "rtrim": { + "name": "rtrim", + "version": "2.3.0", + "sha256": "14i81rd4iyych1yrqf3y1b3nf5hrpfjfdb4xync2v4mqqrhx0cmx", + "depends": [] + }, "rtry": { "name": "rtry", "version": "1.1.0", @@ -105527,19 +106631,19 @@ "name": "rts", "version": "1.1-14", "sha256": "07rnpn8bz9r7p6xymzmbynrg2xq8wfpzh50j7i578v6rmyhm2fl8", - "depends": ["raster", "RCurl", "terra", "xts", "zoo"] + "depends": ["RCurl", "raster", "terra", "xts", "zoo"] }, "rts2": { "name": "rts2", - "version": "0.7.4", - "sha256": "13s1v4izqhq3w6ahna228wgs3n9zxqbmxzjjy69lmvrksfrkdy57", - "depends": ["BH", "glmmrBase", "lubridate", "R6", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sf", "SparseChol", "StanHeaders"] + "version": "0.7.5", + "sha256": "0qzdcwrs326vl5m82x06029a8y85k2ysxbwy1lzgdnhwqp127a42", + "depends": ["BH", "R6", "Rcpp", "RcppEigen", "RcppParallel", "SparseChol", "StanHeaders", "glmmrBase", "lubridate", "rstan", "rstantools", "sf"] }, "rtsdata": { "name": "rtsdata", "version": "0.1.4", "sha256": "0djw6qp6jdkz4r0j5dzjql2rhap4syl7psdglgd9razv5vzqmn6c", - "depends": ["anytime", "brotli", "curl", "data_table", "mongolite", "Quandl", "quantmod", "xts", "zoo"] + "depends": ["Quandl", "anytime", "brotli", "curl", "data_table", "mongolite", "quantmod", "xts", "zoo"] }, "rtson": { "name": "rtson", @@ -105551,7 +106655,7 @@ "name": "rtsplot", "version": "0.1.5", "sha256": "1vryh0s1mz9h9ksf5n27vvrdbsjk8yvizd31cnj4grz71v4c1dh1", - "depends": ["quantmod", "RColorBrewer", "xts", "zoo"] + "depends": ["RColorBrewer", "quantmod", "xts", "zoo"] }, "rtweet": { "name": "rtweet", @@ -105575,7 +106679,7 @@ "name": "rubias", "version": "0.3.4", "sha256": "1b36w3mqfazv62zb542b3c4h2xwjrjqx1azxhl0daw57x2lfh01b", - "depends": ["dplyr", "gtools", "magrittr", "Rcpp", "RcppParallel", "readr", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppParallel", "dplyr", "gtools", "magrittr", "readr", "rlang", "stringr", "tibble", "tidyr"] }, "rucm": { "name": "rucm", @@ -105593,7 +106697,7 @@ "name": "rugarch", "version": "1.5-1", "sha256": "07nyfwaqqlizg0cawgiv8wdj7qr36pgi0z1mk9lambzb0w453zlz", - "depends": ["chron", "ks", "nloptr", "numDeriv", "Rcpp", "RcppArmadillo", "Rsolnp", "SkewHyperbolic", "spd", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "Rsolnp", "SkewHyperbolic", "chron", "ks", "nloptr", "numDeriv", "spd", "xts", "zoo"] }, "ruijter": { "name": "ruijter", @@ -105629,13 +106733,13 @@ "name": "rumidas", "version": "0.1.2", "sha256": "1y2fahyffdmnybj3hi4826sc7m5q9vvrcbz4xvd9dmm1zpgjqajx", - "depends": ["lubridate", "maxLik", "Rdpack", "roll", "tseries", "xts", "zoo"] + "depends": ["Rdpack", "lubridate", "maxLik", "roll", "tseries", "xts", "zoo"] }, "ruminate": { "name": "ruminate", "version": "0.2.4", "sha256": "1i3b5mlg4kcd8hsphax75r046yq180jrbnyr7iylkyilf6dgqyyf", - "depends": ["digest", "dplyr", "DT", "flextable", "formods", "ggplot2", "onbrand", "PKNCA", "plotly", "rhandsontable", "rlang", "rxode2", "shiny", "shinyAce", "shinyWidgets", "stringr", "tidyr", "yaml"] + "depends": ["DT", "PKNCA", "digest", "dplyr", "flextable", "formods", "ggplot2", "onbrand", "plotly", "rhandsontable", "rlang", "rxode2", "shiny", "shinyAce", "shinyWidgets", "stringr", "tidyr", "yaml"] }, "runDRT": { "name": "runDRT", @@ -105695,7 +106799,13 @@ "name": "rusda", "version": "1.0.8", "sha256": "0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338", - "depends": ["foreach", "httr", "plyr", "RCurl", "stringr", "taxize", "testthat", "XML"] + "depends": ["RCurl", "XML", "foreach", "httr", "plyr", "stringr", "taxize", "testthat"] + }, + "rush": { + "name": "rush", + "version": "0.1.1", + "sha256": "1lq1yikhykxa70ypn7y2s3njj0b8vnazjd24766sq4bgmyp60fdj", + "depends": ["R6", "checkmate", "data_table", "jsonlite", "lgr", "mlr3misc", "processx", "redux", "uuid"] }, "rusk": { "name": "rusk", @@ -105703,16 +106813,10 @@ "sha256": "0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk", "depends": ["dplyr", "ggforce", "ggplot2", "reshape2", "shiny", "tidyr"] }, - "rusquant": { - "name": "rusquant", - "version": "1.1.1", - "sha256": "02saxymlmjmbzczhn2ihyn09106005wi39f2q9dyasrzi7n6v6pk", - "depends": ["base64enc", "data_table", "httr", "jose", "jsonlite", "quantmod", "rvest", "stringr", "XML", "xts"] - }, "rust": { "name": "rust", - "version": "1.4.2", - "sha256": "1pp37h27pyjzcwabazyfmlgrma6x0k8hbq3ksfvlgphsk9hac93z", + "version": "1.4.3", + "sha256": "069zybqgmf1mnhw9g6kr7ypm0r9ghlw9kndqigvwgzqwfmqj62c9", "depends": ["Rcpp", "RcppArmadillo"] }, "rutifier": { @@ -105785,7 +106889,7 @@ "name": "rvg", "version": "0.3.3", "sha256": "0m9xfii35rv5dkk1n675s2schnxy90344ccbk1998g1qw9x1bj0m", - "depends": ["gdtools", "officer", "Rcpp", "rlang", "xml2"] + "depends": ["Rcpp", "gdtools", "officer", "rlang", "xml2"] }, "rviewgraph": { "name": "rviewgraph", @@ -105803,7 +106907,7 @@ "name": "rvinecopulib", "version": "0.6.3.1.1", "sha256": "0cmzijh03mbl3b3x8gin3vzgc52yrxmai45dxw5a6zrfal3x15fz", - "depends": ["assertthat", "BH", "kde1d", "lattice", "Rcpp", "RcppEigen", "RcppThread", "wdm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppThread", "assertthat", "kde1d", "lattice", "wdm"] }, "rvisidata": { "name": "rvisidata", @@ -105839,7 +106943,7 @@ "name": "rwarrior", "version": "0.4.1", "sha256": "1s92qy57n92qwlf51hr6v5k2gip5f9jz9q4kpgb3vjql6nykrp4v", - "depends": ["checkmate", "cli", "dplyr", "glue", "R6", "stringr", "tibble"] + "depends": ["R6", "checkmate", "cli", "dplyr", "glue", "stringr", "tibble"] }, "rwavelet": { "name": "rwavelet", @@ -105887,7 +106991,7 @@ "name": "rworkflows", "version": "1.0.1", "sha256": "1ys66dcl5k61bkzvz8pxw08hr987jy3xpgm8akha5s4vp3jdkpqc", - "depends": ["badger", "BiocManager", "data_table", "desc", "here", "renv", "yaml"] + "depends": ["BiocManager", "badger", "data_table", "desc", "here", "renv", "yaml"] }, "rworldmap": { "name": "rworldmap", @@ -105911,7 +107015,7 @@ "name": "rwty", "version": "1.0.2", "sha256": "0p0bpq5dk8vjqx8ry364xhaq3rgxa49planapggicg7by2mhaacc", - "depends": ["ape", "coda", "GGally", "ggdendro", "ggplot2", "phangorn", "plyr", "reshape2", "viridis"] + "depends": ["GGally", "ape", "coda", "ggdendro", "ggplot2", "phangorn", "plyr", "reshape2", "viridis"] }, "rwunderground": { "name": "rwunderground", @@ -105923,37 +107027,37 @@ "name": "rxSeq", "version": "0.99.3", "sha256": "0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx", - "depends": ["MASS", "numDeriv", "VGAM"] + "depends": ["MASS", "VGAM", "numDeriv"] }, "rxode2": { "name": "rxode2", "version": "2.1.3", "sha256": "0r6j4wxkzxw4dabz2z1lssbw98mfk7sb64br01bmsqr1d19p5n1v", - "depends": ["backports", "BH", "checkmate", "cli", "data_table", "ggplot2", "inline", "lotri", "magrittr", "memoise", "PreciseSums", "qs", "Rcpp", "RcppArmadillo", "rex", "rxode2et", "rxode2ll", "rxode2parse", "rxode2random", "sys"] + "depends": ["BH", "PreciseSums", "Rcpp", "RcppArmadillo", "backports", "checkmate", "cli", "data_table", "ggplot2", "inline", "lotri", "magrittr", "memoise", "qs", "rex", "rxode2et", "rxode2ll", "rxode2parse", "rxode2random", "sys"] }, "rxode2et": { "name": "rxode2et", "version": "2.0.13", "sha256": "1pprky6j5vzijichr7kzfavc8ly3k272xnzvwix60v77z9zn5kyw", - "depends": ["checkmate", "cli", "crayon", "lotri", "magrittr", "Rcpp", "rxode2parse", "rxode2random"] + "depends": ["Rcpp", "checkmate", "cli", "crayon", "lotri", "magrittr", "rxode2parse", "rxode2random"] }, "rxode2ll": { "name": "rxode2ll", "version": "2.0.11", "sha256": "0fj5lbs67g1adjywfnav88rsj0sy3lwwf4gyimdh89rbm1glrrs3", - "depends": ["BH", "checkmate", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "checkmate"] }, "rxode2parse": { "name": "rxode2parse", "version": "2.0.19", "sha256": "01q3chhq7nl1jl50w623m1nik9jdrizpc4hi792ynsr27lsqlhcx", - "depends": ["BH", "checkmate", "crayon", "data_table", "digest", "dparser", "knitr", "qs", "Rcpp", "RcppEigen", "rex", "StanHeaders", "symengine"] + "depends": ["BH", "Rcpp", "RcppEigen", "StanHeaders", "checkmate", "crayon", "data_table", "digest", "dparser", "knitr", "qs", "rex", "symengine"] }, "rxode2random": { "name": "rxode2random", "version": "2.1.1", "sha256": "1zrddjq1i2wfx6ai4wwp1l0vnyk5i19dcr7f2q3f66jhlj9fqp27", - "depends": ["BH", "checkmate", "lotri", "Rcpp", "RcppArmadillo", "rxode2parse", "sitmo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "checkmate", "lotri", "rxode2parse", "sitmo"] }, "rxylib": { "name": "rxylib", @@ -105993,8 +107097,8 @@ }, "s2": { "name": "s2", - "version": "1.1.6", - "sha256": "0rm0jd5k5w725v1bnn6ix8vic40grdh61y6qdy8jy4lhg1mjx78x", + "version": "1.1.7", + "sha256": "0y38g1zy19m7xsipns3m6avmjb9vnyw683nmlgsf4wnxa1qjqxih", "depends": ["Rcpp", "wk"] }, "s20x": { @@ -106007,7 +107111,7 @@ "name": "s2dv", "version": "2.0.0", "sha256": "0lgkdb1gphqsggqnyrl1hlfx1x5zxbhb9msr6xyj4hhp03m16z9x", - "depends": ["abind", "bigmemory", "ClimProjDiags", "easyNCDF", "easyVerification", "mapproj", "maps", "multiApply", "NbClust", "ncdf4", "plyr", "SpecsVerification"] + "depends": ["ClimProjDiags", "NbClust", "SpecsVerification", "abind", "bigmemory", "easyNCDF", "easyVerification", "mapproj", "maps", "multiApply", "ncdf4", "plyr"] }, "s2net": { "name": "s2net", @@ -106025,13 +107129,13 @@ "name": "s3.resourcer", "version": "1.1.1", "sha256": "0njl93c1pxsg04fr74pnrpvx3z5m8nk2xv700l0jhbygshw8k5z2", - "depends": ["aws_s3", "httr", "R6", "resourcer", "sparklyr"] + "depends": ["R6", "aws_s3", "httr", "resourcer", "sparklyr"] }, "s3fs": { "name": "s3fs", - "version": "0.1.5", - "sha256": "08i8a1629b63b1ai3ngh59xwnh8vzmzpz1wvxhwylpk7igwwsbg0", - "depends": ["curl", "data_table", "fs", "future", "future_apply", "lgr", "paws_storage", "R6"] + "version": "0.1.6", + "sha256": "18v81w2b7xgq8x66x3z893bg456qq38v1f9n4xx12vhk45sh8y2h", + "depends": ["R6", "curl", "data_table", "fs", "future", "future_apply", "lgr", "paws_storage"] }, "s4vd": { "name": "s4vd", @@ -106049,7 +107153,7 @@ "name": "sBIC", "version": "0.2.0", "sha256": "1fx17c9w7v6wi02i293vjdahwxx4b5a118r655cl12gsd5qwqj11", - "depends": ["combinat", "flexmix", "hash", "igraph", "mclust", "poLCA", "R_methodsS3", "R_oo", "Rcpp"] + "depends": ["R_methodsS3", "R_oo", "Rcpp", "combinat", "flexmix", "hash", "igraph", "mclust", "poLCA"] }, "sClust": { "name": "sClust", @@ -106067,7 +107171,7 @@ "name": "sFFLHD", "version": "0.1.2", "sha256": "014gy3nj6gr740z4apw82jh4n7s57zmnr95bm3g9xxnwnb224npq", - "depends": ["conf_design", "DoE_base", "R6"] + "depends": ["DoE_base", "R6", "conf_design"] }, "sGBJ": { "name": "sGBJ", @@ -106091,25 +107195,25 @@ "name": "sMTL", "version": "0.1.0", "sha256": "03xq19vh4g3j3jbpad92m2rg933h9lcy4wrzkdi9y47v8h3fqyw1", - "depends": ["caret", "dplyr", "glmnet", "JuliaCall", "JuliaConnectoR"] + "depends": ["JuliaCall", "JuliaConnectoR", "caret", "dplyr", "glmnet"] }, "sNPLS": { "name": "sNPLS", "version": "1.0.27", "sha256": "0h05crdmwmzax4pwmyxb2z1dagyqb3kybpxc064y1kl8m84kcyvv", - "depends": ["clickR", "future", "future_apply", "ggplot2", "ggrepel", "ks", "MASS", "Matrix", "pbapply"] + "depends": ["MASS", "Matrix", "clickR", "future", "future_apply", "ggplot2", "ggrepel", "ks", "pbapply"] }, "sRDA": { "name": "sRDA", "version": "1.0.0", "sha256": "0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk", - "depends": ["doParallel", "elasticnet", "foreach", "Matrix", "mvtnorm"] + "depends": ["Matrix", "doParallel", "elasticnet", "foreach", "mvtnorm"] }, "sRNAGenetic": { "name": "sRNAGenetic", "version": "0.1.0", "sha256": "1cvk40rkbxvr8jhwfqkgdfy150mi56y976pjp2w34rnghry6ql8z", - "depends": ["DESeq2", "futile_logger", "ggplot2", "ggsci", "plyr", "VennDiagram"] + "depends": ["DESeq2", "VennDiagram", "futile_logger", "ggplot2", "ggsci", "plyr"] }, "sRdpData": { "name": "sRdpData", @@ -106151,13 +107255,13 @@ "name": "sacRebleu", "version": "0.1.3", "sha256": "0piapn7srrfc4qmwkpjrsfyhz253pl69ppm3y9flqlffki5b5zx1", - "depends": ["checkmate", "Rcpp", "tok"] + "depends": ["Rcpp", "checkmate", "tok"] }, "saccadr": { "name": "saccadr", "version": "0.1.3", "sha256": "0c51zbkh8b0xi0sshzq5agbijw6nprrb3r1k77wcfqsr2mazfwi5", - "depends": ["cluster", "dplyr", "magrittr", "Rcpp", "rlang", "signal", "tidyr"] + "depends": ["Rcpp", "cluster", "dplyr", "magrittr", "rlang", "signal", "tidyr"] }, "sad": { "name": "sad", @@ -106169,25 +107273,25 @@ "name": "sadists", "version": "0.2.5", "sha256": "0c7bmca6yyz5hca2ghr2zc6lmwi94cywz8gkpsakrnmk0f7680xi", - "depends": ["hypergeo", "orthopolynom", "PDQutils"] + "depends": ["PDQutils", "hypergeo", "orthopolynom"] }, "sads": { "name": "sads", "version": "0.6.3", "sha256": "196kzsq3afzj8j69417i6xmbbjgbm5qyinrw6s6drs07yhvnzp0f", - "depends": ["bbmle", "GUILDS", "MASS", "poilog", "poweRlaw", "VGAM"] + "depends": ["GUILDS", "MASS", "VGAM", "bbmle", "poilog", "poweRlaw"] }, "sae": { "name": "sae", "version": "1.3", "sha256": "1ncrlzgnga9pfa2j8x1y6axl2665rp08aff98zrim6gq6n6yap8z", - "depends": ["lme4", "MASS"] + "depends": ["MASS", "lme4"] }, "sae_prop": { "name": "sae.prop", "version": "0.1.2", "sha256": "19q86xjpvr3s3paspkzsr40zvff60mxxh57xpz0fnxldivynh6ia", - "depends": ["corpcor", "fpc", "magic", "MASS", "progress"] + "depends": ["MASS", "corpcor", "fpc", "magic", "progress"] }, "sae2": { "name": "sae2", @@ -106205,7 +107309,7 @@ "name": "saeHB", "version": "0.2.2", "sha256": "1wv9b656s93r9vnm6j0j10gd1q92vbawhy5ijjzvzsn9drzzwzsc", - "depends": ["CARBayesdata", "coda", "MASS", "nimble", "rjags", "stringr"] + "depends": ["CARBayesdata", "MASS", "coda", "nimble", "rjags", "stringr"] }, "saeHB_ME": { "name": "saeHB.ME", @@ -106265,19 +107369,19 @@ "name": "saeRobust", "version": "0.5.0", "sha256": "0rq4az5rzjljjswkdbcz7y5lyrnhyx9b20w81s4665iwrl3fcniw", - "depends": ["aoos", "assertthat", "ggplot2", "magrittr", "MASS", "Matrix", "memoise", "modules", "pbapply", "Rcpp", "RcppArmadillo", "spdep"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "aoos", "assertthat", "ggplot2", "magrittr", "memoise", "modules", "pbapply", "spdep"] }, "saeSim": { "name": "saeSim", "version": "0.11.0", "sha256": "0s0zcls4j3cx7wbvi0l3q4c3b0f9x9i2wcqnz4gzwyqik6pcfaic", - "depends": ["dplyr", "functional", "ggplot2", "MASS", "parallelMap", "spdep", "tibble"] + "depends": ["MASS", "dplyr", "functional", "ggplot2", "parallelMap", "spdep", "tibble"] }, "saeTrafo": { "name": "saeTrafo", "version": "1.0.4", "sha256": "1sqmymazs3g1xlqvphbwmpvl5yhkmbmpcyc1mxqdxaj3yap44qwr", - "depends": ["emdi", "ggplot2", "gridExtra", "HLMdiag", "moments", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "rlang", "sfsmisc", "stringr"] + "depends": ["HLMdiag", "emdi", "ggplot2", "gridExtra", "moments", "nlme", "openxlsx", "parallelMap", "readODS", "reshape2", "rlang", "sfsmisc", "stringr"] }, "saebnocov": { "name": "saebnocov", @@ -106289,7 +107393,7 @@ "name": "saeczi", "version": "0.2.0", "sha256": "02jsmmzaig5d8lr9avra3acy93klh7f88izxsf04gn0w855y37cv", - "depends": ["dplyr", "furrr", "future", "lme4", "progressr", "purrr", "Rcpp", "RcppEigen", "rlang"] + "depends": ["Rcpp", "RcppEigen", "dplyr", "furrr", "future", "lme4", "progressr", "purrr", "rlang"] }, "saeeb": { "name": "saeeb", @@ -106307,7 +107411,7 @@ "name": "saemix", "version": "3.3", "sha256": "1xx6254sj6lyarkkdkl3lajflyh8c2y8261bl9a19d1457l1h8wv", - "depends": ["ggplot2", "gridExtra", "MASS", "mclust", "npde", "rlang", "scales"] + "depends": ["MASS", "ggplot2", "gridExtra", "mclust", "npde", "rlang", "scales"] }, "saens": { "name": "saens", @@ -106337,13 +107441,13 @@ "name": "safetensors", "version": "0.1.2", "sha256": "0xvg5y2sd7gzcal0qqgxbx8vcvmy50jm0j2ajr8iw3wyy5qpyvkp", - "depends": ["cli", "jsonlite", "R6", "rlang"] + "depends": ["R6", "cli", "jsonlite", "rlang"] }, "safetyCharts": { "name": "safetyCharts", "version": "0.3.0", "sha256": "1riyd2rb799rr0j95s3wd45rwq8syfm0xllpihycpak0f56vg1s8", - "depends": ["dplyr", "DT", "forcats", "ggplot2", "htmlwidgets", "huxtable", "jsonlite", "pharmaRTF", "plotly", "purrr", "RColorBrewer", "rlang", "shiny", "stringr", "Tendril", "Tplyr"] + "depends": ["DT", "RColorBrewer", "Tendril", "Tplyr", "dplyr", "forcats", "ggplot2", "htmlwidgets", "huxtable", "jsonlite", "pharmaRTF", "plotly", "purrr", "rlang", "shiny", "stringr"] }, "safetyData": { "name": "safetyData", @@ -106355,7 +107459,7 @@ "name": "safetyGraphics", "version": "2.1.1", "sha256": "1bvmxhy2giprf4cy1xfc42rl8hcw0pi3691kzfgqhj65sawdjwfd", - "depends": ["datamods", "dplyr", "DT", "htmlwidgets", "jsonlite", "magrittr", "purrr", "rclipboard", "rlang", "safetyCharts", "safetyData", "shiny", "shinyjs", "sortable", "stringr", "tidyr", "yaml"] + "depends": ["DT", "datamods", "dplyr", "htmlwidgets", "jsonlite", "magrittr", "purrr", "rclipboard", "rlang", "safetyCharts", "safetyData", "shiny", "shinyjs", "sortable", "stringr", "tidyr", "yaml"] }, "sageR": { "name": "sageR", @@ -106369,11 +107473,17 @@ "sha256": "1grhfxpqx9dyvqd2v91im3jgki2k3abcaal2ix9pcdzz93fc9xlw", "depends": ["mvtnorm"] }, + "salad": { + "name": "salad", + "version": "1.0", + "sha256": "1fcs6g1ld514gkr5rxbawpxd81p9ywfxfhrh3jjwd3807gc9l2r4", + "depends": [] + }, "salesforcer": { "name": "salesforcer", "version": "1.0.1", "sha256": "19z4q5k0k1c1s2piqjg0z6nrwabap016nbx3jpf51lvmh5lp8ycf", - "depends": ["anytime", "base64enc", "curl", "data_table", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "mime", "purrr", "readr", "rlang", "rlist", "tibble", "vctrs", "XML", "xml2", "zip"] + "depends": ["XML", "anytime", "base64enc", "curl", "data_table", "dplyr", "httr", "jsonlite", "lifecycle", "lubridate", "mime", "purrr", "readr", "rlang", "rlist", "tibble", "vctrs", "xml2", "zip"] }, "salso": { "name": "salso", @@ -106391,19 +107501,19 @@ "name": "samadb", "version": "0.3.0", "sha256": "1qbjjnchx9h3wrhf23cpmwfaixdkm4jcpkgniz3h5ghrhqv32grr", - "depends": ["collapse", "data_table", "DBI", "RMySQL", "writexl"] + "depends": ["DBI", "RMySQL", "collapse", "data_table", "writexl"] }, "sambia": { "name": "sambia", "version": "0.1.0", "sha256": "15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln", - "depends": ["dplyr", "e1071", "FNN", "mvtnorm", "pROC", "ranger", "smotefamily"] + "depends": ["FNN", "dplyr", "e1071", "mvtnorm", "pROC", "ranger", "smotefamily"] }, "samc": { "name": "samc", - "version": "3.2.1", - "sha256": "0i5k27699p28xzfbdk41ni45l5lp1k2zla5mf15x3livmnn8c3d4", - "depends": ["circular", "Matrix", "raster", "Rcpp", "RcppEigen", "RcppThread", "terra"] + "version": "3.3.0", + "sha256": "0vr6f63phzki3wsq3c4db00wzzfbfnbym33skvxn41c3xggvl324", + "depends": ["Matrix", "Rcpp", "RcppEigen", "RcppThread", "circular", "raster", "terra"] }, "samon": { "name": "samon", @@ -106421,7 +107531,7 @@ "name": "sampleSelection", "version": "1.2-12", "sha256": "1am1w8c24f27gcdmrk3b4wp9j5awghnw9s9lphnkm10pl31881dy", - "depends": ["Formula", "maxLik", "miscTools", "mvtnorm", "systemfit", "VGAM"] + "depends": ["Formula", "VGAM", "maxLik", "miscTools", "mvtnorm", "systemfit"] }, "sampleVADIR": { "name": "sampleVADIR", @@ -106445,7 +107555,7 @@ "name": "samplesize4surveys", "version": "4.1.1", "sha256": "0v332xb4vkkjr3nwf3231aqgzsj7mqld9ffkla1nj52lxay2ji75", - "depends": ["dplyr", "magrittr", "TeachingSampling", "timeDate"] + "depends": ["TeachingSampling", "dplyr", "magrittr", "timeDate"] }, "samplesizeCMH": { "name": "samplesizeCMH", @@ -106469,7 +107579,7 @@ "name": "sampling", "version": "2.10", "sha256": "0x976wblv663aidqmcif1rjv72nbxf4nzms901lmryxbq1p9gv7x", - "depends": ["lpSolve", "MASS"] + "depends": ["MASS", "lpSolve"] }, "samplingDataCRT": { "name": "samplingDataCRT", @@ -106501,6 +107611,12 @@ "sha256": "0a7c078vz4p5x5r29xsvab630pq3p7fwsn31qdcjdcl7n4475rhr", "depends": ["data_table", "dplyr", "magrittr", "rlang", "sampling"] }, + "samplr": { + "name": "samplr", + "version": "1.0.0", + "sha256": "1zmh68518vz3nfjch524b9q5fi8wap54qziq6z5mz9ymaqrwayaa", + "depends": ["R6", "Rcpp", "RcppArmadillo", "RcppDist", "Rdpack", "ggplot2", "latex2exp", "lme4", "pracma", "testthat"] + }, "samplrData": { "name": "samplrData", "version": "1.0.0", @@ -106595,19 +107711,19 @@ "name": "sansa", "version": "0.0.1", "sha256": "1p5qv94f62dxzkbl1jn1fx3vksyhqqa3w2ipqwiflaxlk7q9k5pq", - "depends": ["data_table", "FNN", "ggplot2"] + "depends": ["FNN", "data_table", "ggplot2"] }, "santaR": { "name": "santaR", "version": "1.2.4", "sha256": "048zbx7fr71ibxzgsayzifzv8gka7dmdfsdyvmzssxvzyjcm4qwc", - "depends": ["bslib", "doParallel", "DT", "foreach", "ggplot2", "gridExtra", "iterators", "pcaMethods", "plyr", "reshape2", "shiny"] + "depends": ["DT", "bslib", "doParallel", "foreach", "ggplot2", "gridExtra", "iterators", "pcaMethods", "plyr", "reshape2", "shiny"] }, "santoku": { "name": "santoku", "version": "1.0.0", "sha256": "054bl8sgl0rcvymsqsg8br201snw6rlmac54mfb05a4hsd8y7vq4", - "depends": ["assertthat", "glue", "lifecycle", "Rcpp", "rlang", "vctrs"] + "depends": ["Rcpp", "assertthat", "glue", "lifecycle", "rlang", "vctrs"] }, "sanzo": { "name": "sanzo", @@ -106649,7 +107765,7 @@ "name": "sarima", "version": "0.9.3", "sha256": "0x6wndy7mdmnliabrbs9qbpm7ibf2h7s3m4d90pasna6hw11yg3d", - "depends": ["Formula", "lagged", "ltsa", "numDeriv", "PolynomF", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Formula", "PolynomF", "Rcpp", "RcppArmadillo", "Rdpack", "lagged", "ltsa", "numDeriv"] }, "saros": { "name": "saros", @@ -106683,9 +107799,9 @@ }, "sarsop": { "name": "sarsop", - "version": "0.6.14", - "sha256": "0y315gg3masbpvsf9zk0abj0mh0834h1yhmjg1fwwbqvygg64cjp", - "depends": ["BH", "digest", "Matrix", "processx", "xml2"] + "version": "0.6.15", + "sha256": "0793pvfldbxnqsm0gzpwr792xvvzcr35yj75s5wc4hbv2adv9mvn", + "depends": ["BH", "Matrix", "digest", "processx", "xml2"] }, "sas7bdat": { "name": "sas7bdat", @@ -106703,7 +107819,7 @@ "name": "sasfunclust", "version": "1.0.0", "sha256": "1ba7g3rxyq5h806na6bsdvh6mw6hydgcf3740qkfd4d5fx7m0mq4", - "depends": ["fda", "MASS", "Matrix", "matrixcalc", "mclust", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "fda", "matrixcalc", "mclust"] }, "sasr": { "name": "sasr", @@ -106715,7 +107831,7 @@ "name": "sass", "version": "0.4.9", "sha256": "1lnl2xssz33vg7p6a8ij55hg6j1p1d3y2mq22pvf0r3rmnd08cz1", - "depends": ["fs", "htmltools", "R6", "rappdirs", "rlang"] + "depends": ["R6", "fs", "htmltools", "rappdirs", "rlang"] }, "sassy": { "name": "sassy", @@ -106727,25 +107843,25 @@ "name": "satdad", "version": "1.1", "sha256": "1ig7z0z4filq57sk9rc38pnx79j1lxm1sacl9hbi407y0pqx01k7", - "depends": ["BH", "graphicalExtremes", "igraph", "maps", "partitions", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "graphicalExtremes", "igraph", "maps", "partitions"] }, "sate": { "name": "sate", "version": "2.1.0", "sha256": "19jd8z1343ajx27b14grjnvxxf38b008fzclv7rcpqqp717ajpnv", - "depends": ["ellipse", "MASS"] + "depends": ["MASS", "ellipse"] }, "satellite": { "name": "satellite", "version": "1.0.5", "sha256": "1bd1f8mimx53dcy3fnlhjk7yam08jvr3lhh39zcb5c2yj0pkhk1y", - "depends": ["plyr", "raster", "Rcpp", "terra"] + "depends": ["Rcpp", "plyr", "raster", "terra"] }, "satin": { "name": "satin", "version": "1.1.0", "sha256": "17knbgy89ljp607mkhs62fx9p6b40iqqzgpxr9karlf07l48c0ya", - "depends": ["geosphere", "maps", "ncdf4", "PBSmapping", "sp", "splancs"] + "depends": ["PBSmapping", "geosphere", "maps", "ncdf4", "sp", "splancs"] }, "satres": { "name": "satres", @@ -106769,7 +107885,7 @@ "name": "savvyr", "version": "0.1.1", "sha256": "08lrhb4nc0hcbqjdv1ar31l80gbfgxjivpc5k0farcldksybxjsg", - "depends": ["checkmate", "etm", "Rdpack"] + "depends": ["Rdpack", "checkmate", "etm"] }, "sawnuti": { "name": "sawnuti", @@ -106793,7 +107909,7 @@ "name": "sbd", "version": "0.1.0", "sha256": "0wf46p330l2lx6j9w4600q27n4jzhpzb2kw056654fz2ggd8x6kn", - "depends": ["bbmle", "dplyr", "MASS"] + "depends": ["MASS", "bbmle", "dplyr"] }, "sbde": { "name": "sbde", @@ -106805,7 +107921,7 @@ "name": "sbfc", "version": "1.0.3", "sha256": "0yfbxp3b9j2xjpd1xffkjl2bfxixc7hhzfiwicd9lyi5w2kfwavf", - "depends": ["DiagrammeR", "discretization", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["DiagrammeR", "Matrix", "Rcpp", "RcppArmadillo", "discretization"] }, "sbgcop": { "name": "sbgcop", @@ -106823,7 +107939,7 @@ "name": "sbm", "version": "0.4.6", "sha256": "1cnf4d5xrfsvsy56sh4nz83j82j8yp09hlnvddfgi15zf4md7glx", - "depends": ["alluvial", "blockmodels", "dplyr", "ggplot2", "GREMLINS", "igraph", "magrittr", "prodlim", "purrr", "R6", "Rcpp", "RcppArmadillo", "reshape2", "rlang", "stringr"] + "depends": ["GREMLINS", "R6", "Rcpp", "RcppArmadillo", "alluvial", "blockmodels", "dplyr", "ggplot2", "igraph", "magrittr", "prodlim", "purrr", "reshape2", "rlang", "stringr"] }, "sbmSDP": { "name": "sbmSDP", @@ -106835,19 +107951,19 @@ "name": "sbo", "version": "0.5.0", "sha256": "00pnvpcl6441gf8npf6b6cvzxh0kq4qbfxggjiqdny6lq2nl0d47", - "depends": ["dplyr", "Rcpp", "rlang", "testthat", "tidyr"] + "depends": ["Rcpp", "dplyr", "rlang", "testthat", "tidyr"] }, "sboost": { "name": "sboost", "version": "0.1.2", "sha256": "1vh3hk15chkyrkpnj4i40542bck9ny45g424bncxdxl9fgxc4nhk", - "depends": ["dplyr", "Rcpp", "rlang"] + "depends": ["Rcpp", "dplyr", "rlang"] }, "sbrl": { "name": "sbrl", "version": "1.4", "sha256": "0sr57zfd75ywgv4az0y7jiacalywf36z3gmsjdgmw0adzaxxdcsg", - "depends": ["arules", "Rcpp"] + "depends": ["Rcpp", "arules"] }, "sbtools": { "name": "sbtools", @@ -106857,9 +107973,9 @@ }, "sbw": { "name": "sbw", - "version": "1.1.5", - "sha256": "10ks912f4xiy0i484vf24w5zz9n7kxlcy77ikz95p8vr5zlqkvgc", - "depends": ["MASS", "Matrix", "quadprog", "slam", "spatstat_geom"] + "version": "1.1.9", + "sha256": "0815xxgzz0b79bv9g4cw144dl6y6f2yi2k2n2khfhpwd8ipgmsr7", + "depends": ["MASS", "Matrix", "quadprog", "slam", "spatstat_univar"] }, "sc2sc": { "name": "sc2sc", @@ -106871,19 +107987,19 @@ "name": "scAnnotate", "version": "0.3", "sha256": "02hrfs5ci2ii3hr4d4ks5bj80n5ajdnx71m6swmdciiy72sdm1lc", - "depends": ["glmnet", "harmony", "Seurat", "SeuratObject"] + "depends": ["Seurat", "SeuratObject", "glmnet", "harmony"] }, "scBSP": { "name": "scBSP", "version": "1.0.0", "sha256": "0cabj2hizmnadq5vijaip4d1wcsycwy5bdpgjwivzgqkhy9r5ss7", - "depends": ["fitdistrplus", "Matrix", "RANN", "spam", "sparseMatrixStats"] + "depends": ["Matrix", "RANN", "fitdistrplus", "spam", "sparseMatrixStats"] }, "scBio": { "name": "scBio", "version": "0.1.6", "sha256": "1bpizxm9fbxd4sfapi1ayfg5csacb4dvqbvappd79jkq4mrsk12q", - "depends": ["doSNOW", "fields", "foreach", "LiblineaR", "limma", "raster", "sp"] + "depends": ["LiblineaR", "doSNOW", "fields", "foreach", "limma", "raster", "sp"] }, "scCAN": { "name": "scCAN", @@ -106901,7 +108017,7 @@ "name": "scCustomize", "version": "2.1.2", "sha256": "150h8aj9qyg7v9yh5mhkr6nbf05ia91l5v9cqy58ipg6bwa9lmib", - "depends": ["circlize", "cli", "cowplot", "data_table", "dplyr", "forcats", "ggbeeswarm", "ggplot2", "ggprism", "ggrastr", "ggrepel", "glue", "janitor", "lifecycle", "magrittr", "Matrix", "paletteer", "patchwork", "pbapply", "purrr", "rlang", "scales", "scattermore", "Seurat", "SeuratObject", "stringi", "stringr", "tibble", "tidyr"] + "depends": ["Matrix", "Seurat", "SeuratObject", "circlize", "cli", "cowplot", "data_table", "dplyr", "forcats", "ggbeeswarm", "ggplot2", "ggprism", "ggrastr", "ggrepel", "glue", "janitor", "lifecycle", "magrittr", "paletteer", "patchwork", "pbapply", "purrr", "rlang", "scales", "scattermore", "stringi", "stringr", "tibble", "tidyr"] }, "scDECO": { "name": "scDECO", @@ -106913,7 +108029,7 @@ "name": "scDHA", "version": "1.2.2", "sha256": "1l9i5r7z4n387mrfmq43md2a0wrhvshrggb4nc3varjyq3drh3yd", - "depends": ["cluster", "coro", "doParallel", "foreach", "igraph", "Matrix", "matrixStats", "Rcpp", "RcppAnnoy", "RcppArmadillo", "RcppParallel", "RhpcBLASctl", "torch", "uwot"] + "depends": ["Matrix", "Rcpp", "RcppAnnoy", "RcppArmadillo", "RcppParallel", "RhpcBLASctl", "cluster", "coro", "doParallel", "foreach", "igraph", "matrixStats", "torch", "uwot"] }, "scDIFtest": { "name": "scDIFtest", @@ -106925,37 +108041,37 @@ "name": "scDiffCom", "version": "1.0.0", "sha256": "17scb8hhx2d67cbhzxd0l2hzy4sj22x5j9rvc71ba2d958wk4ysa", - "depends": ["data_table", "DelayedArray", "future", "future_apply", "magrittr", "Seurat"] + "depends": ["DelayedArray", "Seurat", "data_table", "future", "future_apply", "magrittr"] }, "scGOclust": { "name": "scGOclust", "version": "0.2.1", "sha256": "0jbmjrc5xmxvkc6q93blbryqvyxcy6ia6bmca03vq05l6isybal6", - "depends": ["biomaRt", "dplyr", "limma", "magrittr", "Matrix", "networkD3", "Seurat", "slanter", "tibble", "tidyr"] + "depends": ["Matrix", "Seurat", "biomaRt", "dplyr", "limma", "magrittr", "networkD3", "slanter", "tibble", "tidyr"] }, "scGate": { "name": "scGate", "version": "1.6.2", "sha256": "0zlbrvr6lxcihspfqgpvv5kyrzqqpy3451j0kpnqc0n93bbs4cqk", - "depends": ["BiocParallel", "dplyr", "ggplot2", "ggridges", "patchwork", "reshape2", "Seurat", "UCell"] + "depends": ["BiocParallel", "Seurat", "UCell", "dplyr", "ggplot2", "ggridges", "patchwork", "reshape2"] }, "scINSIGHT": { "name": "scINSIGHT", "version": "0.1.4", "sha256": "1zkm2n19px3yh3y2z1g5l84ym36ar31i96i54mm7wa0ki179swap", - "depends": ["igraph", "RANN", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["RANN", "Rcpp", "RcppArmadillo", "igraph", "stringr"] }, "scISR": { "name": "scISR", "version": "0.1.1", "sha256": "0m4sgbyc05qy1zklw45zj4w4wx0fhiwqr90fc3gpkqq7xkd7ihbw", - "depends": ["cluster", "entropy", "irlba", "markdown", "matrixStats", "PINSPlus"] + "depends": ["PINSPlus", "cluster", "entropy", "irlba", "markdown", "matrixStats"] }, "scITD": { "name": "scITD", "version": "1.0.4", "sha256": "0xcx8bvl2w2qa4c68w5hvfx9412qvscjvj8d6hp4q62z58xqy1f8", - "depends": ["circlize", "ComplexHeatmap", "dplyr", "edgeR", "fgsea", "ggplot2", "ggpubr", "ica", "Matrix", "mgcv", "msigdbr", "NMF", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "reshape2", "Rmisc", "rTensor", "sccore", "sva"] + "depends": ["ComplexHeatmap", "Matrix", "NMF", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppProgress", "Rmisc", "circlize", "dplyr", "edgeR", "fgsea", "ggplot2", "ggpubr", "ica", "mgcv", "msigdbr", "rTensor", "reshape2", "sccore", "sva"] }, "scLink": { "name": "scLink", @@ -106967,13 +108083,13 @@ "name": "scMappR", "version": "1.0.11", "sha256": "0a2jm2a10lawqrlcglaz31gx3kbvjz19f4ynhllkj0px61awxjah", - "depends": ["ADAPTS", "downloader", "ggplot2", "gProfileR", "gprofiler2", "GSVA", "limSolve", "pbapply", "pcaMethods", "pheatmap", "reshape", "Seurat"] + "depends": ["ADAPTS", "GSVA", "Seurat", "downloader", "gProfileR", "ggplot2", "gprofiler2", "limSolve", "pbapply", "pcaMethods", "pheatmap", "reshape"] }, "scModels": { "name": "scModels", "version": "1.0.4", "sha256": "01minq4b0pdjlh2r56lvr2ab6r7sp7l9sjz8a9hmx5xmizmygmvr", - "depends": ["gamlss_dist", "Rcpp"] + "depends": ["Rcpp", "gamlss_dist"] }, "scOntoMatch": { "name": "scOntoMatch", @@ -106985,25 +108101,25 @@ "name": "scPloidy", "version": "0.6.2", "sha256": "0p8rn2c58601yjkampgw360w6r8sbwg0rk007jnvkayfad5xhdvd", - "depends": ["dplyr", "GenomicRanges", "magrittr", "MASS", "matrixStats", "mixtools", "nimble", "rlang", "Rsamtools", "tibble", "tidyr"] + "depends": ["GenomicRanges", "MASS", "Rsamtools", "dplyr", "magrittr", "matrixStats", "mixtools", "nimble", "rlang", "tibble", "tidyr"] }, "scRNAstat": { "name": "scRNAstat", "version": "0.1.1", "sha256": "0yv5np7jafmygg77bwisrha5y2rdb1va906ngzs4zc8mvxr0dvlm", - "depends": ["clustree", "dplyr", "ggplot2", "magrittr", "Matrix", "patchwork", "Seurat", "stringr"] + "depends": ["Matrix", "Seurat", "clustree", "dplyr", "ggplot2", "magrittr", "patchwork", "stringr"] }, "scRNAtools": { "name": "scRNAtools", "version": "1.0", "sha256": "0x0lniqhq6q87y08kkkyvmk1g5b8i73hm3h86ba8rcv0v0n7ap9a", - "depends": ["ALL", "ConsensusClusterPlus", "corrplot", "edgeR", "foreach", "ggplot2", "ggthemes", "Hmisc", "igraph", "lattice", "limma", "PerformanceAnalytics", "plyr", "reshape2", "Rmisc", "Rtsne", "scatterplot3d", "survival", "TPEA"] + "depends": ["ALL", "ConsensusClusterPlus", "Hmisc", "PerformanceAnalytics", "Rmisc", "Rtsne", "TPEA", "corrplot", "edgeR", "foreach", "ggplot2", "ggthemes", "igraph", "lattice", "limma", "plyr", "reshape2", "scatterplot3d", "survival"] }, "scROSHI": { "name": "scROSHI", "version": "1.0.0.0", "sha256": "15mgbgb21wz1gnkw6mxkvckxj345cxi4w5hzwgxfqjvxq9wx6bik", - "depends": ["limma", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "uwot"] + "depends": ["S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "limma", "uwot"] }, "scSorter": { "name": "scSorter", @@ -107021,19 +108137,19 @@ "name": "scTenifoldKnk", "version": "1.0.1", "sha256": "0d6gcr0qrm7mc36n2lihl7bq9vj40dblqswznbwvxichv8kc5svz", - "depends": ["MASS", "Matrix", "pbapply", "RSpectra", "scTenifoldNet"] + "depends": ["MASS", "Matrix", "RSpectra", "pbapply", "scTenifoldNet"] }, "scTenifoldNet": { "name": "scTenifoldNet", "version": "1.3", "sha256": "02ijwi487pfwhgdmpals2snx5dvdnkbkyp9g1yldw12a9v8rz8q7", - "depends": ["MASS", "Matrix", "pbapply", "RhpcBLASctl", "RSpectra"] + "depends": ["MASS", "Matrix", "RSpectra", "RhpcBLASctl", "pbapply"] }, "scUtils": { "name": "scUtils", "version": "0.1.0", "sha256": "09c4vwrjj4r0nfcwb8q0a243m0v5wa3qisdlcy7ik58gyxp02zv8", - "depends": ["assertthat", "dplyr", "ggplot2", "Matrix", "scales", "viridis", "viridisLite"] + "depends": ["Matrix", "assertthat", "dplyr", "ggplot2", "scales", "viridis", "viridisLite"] }, "sca": { "name": "sca", @@ -107075,13 +108191,13 @@ "name": "scales", "version": "1.3.0", "sha256": "122qyd88qr8cc8h3k46xpygm00inqpm55zdy0b7535958imhygmk", - "depends": ["cli", "farver", "glue", "labeling", "lifecycle", "munsell", "R6", "RColorBrewer", "rlang", "viridisLite"] + "depends": ["R6", "RColorBrewer", "cli", "farver", "glue", "labeling", "lifecycle", "munsell", "rlang", "viridisLite"] }, "scalpel": { "name": "scalpel", "version": "1.0.3", "sha256": "0c8k99i5v2ki2bmcjjr6rfk7y1ds7jlykdwgn5x2zvzpdw7p4vlw", - "depends": ["gam", "igraph", "Matrix", "protoclust", "R_matlab"] + "depends": ["Matrix", "R_matlab", "gam", "igraph", "protoclust"] }, "scalreg": { "name": "scalreg", @@ -107091,21 +108207,21 @@ }, "scam": { "name": "scam", - "version": "1.2-16", - "sha256": "097gxx1lxsrjacj38ahxz3mkjy9621yw0v2fk59bm90403i6zjb7", + "version": "1.2-17", + "sha256": "00h5wcvh8wz2xqqh7j2qpdamhzdl3yawswyvwbp0r4ys30mfcgdk", "depends": ["Matrix", "mgcv"] }, "scan": { "name": "scan", - "version": "0.60.0", - "sha256": "0ncysjc28maq0ghpj8bpcppmdyllclsshwvd0hvwkc48xnji488q", - "depends": ["car", "kableExtra", "knitr", "magrittr", "mblm", "nlme", "readxl"] + "version": "0.61.0", + "sha256": "04a43vyz8brl4mzn2pzbhdap49zzb64rwb40lzc6150mqmb09bcs", + "depends": ["car", "gt", "kableExtra", "knitr", "magrittr", "mblm", "nlme", "readxl"] }, "scanstatistics": { "name": "scanstatistics", "version": "1.1.1", "sha256": "04pymq6bikmsjqlwszd9ihv85s5qg8ci5y4dr6jmi95dgdm988pj", - "depends": ["dplyr", "ismev", "magrittr", "plyr", "Rcpp", "RcppArmadillo", "sets", "tibble", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ismev", "magrittr", "plyr", "sets", "tibble", "tidyr"] }, "scapGNN": { "name": "scapGNN", @@ -107117,13 +108233,13 @@ "name": "scape", "version": "2.3.3", "sha256": "1jb5c335qsbrpsgngs8c1qlibyb7zvvx6mwydfhm1plx4pkcq0n1", - "depends": ["coda", "Hmisc", "lattice"] + "depends": ["Hmisc", "coda", "lattice"] }, "scaper": { "name": "scaper", "version": "0.1.0", "sha256": "0ygh5lhbpgxc0mbyvc2cv0m3g405aiappysb7msw7r7g2f4x0w6s", - "depends": ["dplyr", "magrittr", "Seurat", "SeuratObject", "stringr", "VAM", "xml2"] + "depends": ["Seurat", "SeuratObject", "VAM", "dplyr", "magrittr", "stringr", "xml2"] }, "scapesClassification": { "name": "scapesClassification", @@ -107141,7 +108257,7 @@ "name": "scatr", "version": "1.0.1", "sha256": "1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d", - "depends": ["cowplot", "ggplot2", "ggridges", "ggstance", "jmvcore", "R6"] + "depends": ["R6", "cowplot", "ggplot2", "ggridges", "ggstance", "jmvcore"] }, "scatterD3": { "name": "scatterD3", @@ -107151,8 +108267,8 @@ }, "scatterPlotMatrix": { "name": "scatterPlotMatrix", - "version": "0.2.0", - "sha256": "0jnahr5hxcbs742h4wr0r6yz8qgfli8xqmxwl29cbr32ipkwjmfg", + "version": "0.3.0", + "sha256": "1hg49n0qk3wlca4abfyzr5n10k2gcv4kq42fm7x9fhiw2mm1xiw9", "depends": ["htmlwidgets"] }, "scattermore": { @@ -107183,19 +108299,19 @@ "name": "sccca", "version": "0.1.1", "sha256": "193d6015zchnmky0kic0msdw040ykvw3isxpzw5ccmg9dqr7j1xp", - "depends": ["dplyr", "HGNChelper", "openxlsx", "plyr", "scales", "Seurat"] + "depends": ["HGNChelper", "Seurat", "dplyr", "openxlsx", "plyr", "scales"] }, "scclust": { "name": "scclust", - "version": "0.2.4", - "sha256": "0rhr5qnsc0ylgs4gmn3d3d4ah2ijnd24n029vik1f0n4ykszn3np", + "version": "0.2.5", + "sha256": "028ssw7k4sj4vzyylb5njfbjisir2vas0xzh63hmwkalncr2dcpv", "depends": ["distances"] }, "sccore": { "name": "sccore", "version": "1.0.5", "sha256": "12jljngm0v75zp0zka1zdrn6pvxvqy7qpakr7vzazvq1vvjd5qlg", - "depends": ["dplyr", "ggplot2", "ggrepel", "igraph", "irlba", "magrittr", "Matrix", "pbmcapply", "pROC", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "rlang", "scales", "tibble", "uwot", "withr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppProgress", "dplyr", "ggplot2", "ggrepel", "igraph", "irlba", "magrittr", "pROC", "pbmcapply", "rlang", "scales", "tibble", "uwot", "withr"] }, "sccr": { "name": "sccr", @@ -107219,13 +108335,13 @@ "name": "scdtb", "version": "0.1.0", "sha256": "0f79lrdrfn064gsgjpj9mr4sx2wyc5z2d6kkz42kb67rqpk23ibl", - "depends": ["broom_mixed", "DT", "ggplot2", "mmcards", "nlme", "shiny", "shinythemes"] + "depends": ["DT", "broom_mixed", "ggplot2", "mmcards", "nlme", "shiny", "shinythemes"] }, "scellpam": { "name": "scellpam", - "version": "1.4.5", - "sha256": "0sgwqpmjwnwvs8s3l4x264kndjsh3k7h5mpxyl0za9s4na3y6s9j", - "depends": ["cluster", "memuse", "Rcpp"] + "version": "1.4.6.2", + "sha256": "0hxbvgq6mq365q8hw91k0pm0ky9psivcd98bxafrgrncqc117cd1", + "depends": ["Rcpp", "cluster", "memuse"] }, "scenes": { "name": "scenes", @@ -107237,19 +108353,19 @@ "name": "scgwr", "version": "0.1.2-21", "sha256": "15pwasxkwirr2wwf8w02cy8zx0bqavzyfixjz3m37c1llrhddpka", - "depends": ["dplyr", "FNN", "optimParallel", "sp", "spData"] + "depends": ["FNN", "dplyr", "optimParallel", "sp", "spData"] }, "sched": { "name": "sched", "version": "1.0.1", "sha256": "0cbbchax694aqbi12hxnssmfk8x56k5wdzkshbzanwjn2ivvr1rb", - "depends": ["chk", "fscache", "lgr", "openssl", "R6", "RCurl"] + "depends": ["R6", "RCurl", "chk", "fscache", "lgr", "openssl"] }, "schemr": { "name": "schemr", - "version": "0.2.0", - "sha256": "192dk2b69wlwwkqrkk1n05q8hsn6djxhscjizj3amj4b701xw612", - "depends": ["apcluster", "dplyr", "magrittr", "OpenImageR", "purrr", "stringr"] + "version": "0.3.0", + "sha256": "0g27w49mg3sd2mc82cj18dafhg757nig1gax8aiqyraga55a4hb1", + "depends": ["OpenImageR", "apcluster", "dplyr", "magrittr", "purrr", "stringr"] }, "schoRsch": { "name": "schoRsch", @@ -107267,7 +108383,7 @@ "name": "scholar", "version": "0.2.4", "sha256": "12r4j1s71szh77nsnqzsi0q5cvkp0cyr2fxzcagk02f42bnp5aww", - "depends": ["dplyr", "ggplot2", "ggraph", "httr", "R_cache", "rlang", "rvest", "stringr", "tidygraph", "xml2"] + "depends": ["R_cache", "dplyr", "ggplot2", "ggraph", "httr", "rlang", "rvest", "stringr", "tidygraph", "xml2"] }, "schoolmath": { "name": "schoolmath", @@ -107309,7 +108425,7 @@ "name": "scicomptools", "version": "1.0.0", "sha256": "193byqr8sjb0hk1k4qj26pnqr5dgqfsxn47ckddgcvzk6ybd6cpl", - "depends": ["data_tree", "dplyr", "ggplot2", "ggwordcloud", "gitcreds", "googledrive", "magrittr", "purrr", "readxl", "SemNetCleaner", "stringr", "tibble", "tidyr", "tidytext", "tidyxl"] + "depends": ["SemNetCleaner", "data_tree", "dplyr", "ggplot2", "ggwordcloud", "gitcreds", "googledrive", "magrittr", "purrr", "readxl", "stringr", "tibble", "tidyr", "tidytext", "tidyxl"] }, "scidesignR": { "name": "scidesignR", @@ -107357,13 +108473,13 @@ "name": "scistreer", "version": "1.2.0", "sha256": "03nd4p7ik66v09yv18c0z1bvdnkr5m0axk78yapd2ri80ihmyi3c", - "depends": ["ape", "dplyr", "ggplot2", "ggtree", "igraph", "parallelDist", "patchwork", "phangorn", "Rcpp", "RcppArmadillo", "RcppParallel", "reshape2", "RhpcBLASctl", "stringr", "tidygraph"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "RhpcBLASctl", "ape", "dplyr", "ggplot2", "ggtree", "igraph", "parallelDist", "patchwork", "phangorn", "reshape2", "stringr", "tidygraph"] }, "scitb": { "name": "scitb", "version": "0.1.8", "sha256": "1dkp4ch2n3j09b49pp0wsnx7pd9c3007kjm4jm72mpk1z17w5c9f", - "depends": ["ggplot2", "MASS", "nortest", "reshape2", "stringi"] + "depends": ["MASS", "ggplot2", "nortest", "reshape2", "stringi"] }, "sclr": { "name": "sclr", @@ -107375,7 +108491,7 @@ "name": "scoper", "version": "1.3.0", "sha256": "0y0bqdxr4g929paddrgs8qqxzp0pwsc62kxl6lbzp4l2xmg3j2j2", - "depends": ["alakazam", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "Rcpp", "rlang", "scales", "shazam", "stringi", "tidyr"] + "depends": ["Rcpp", "alakazam", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "rlang", "scales", "shazam", "stringi", "tidyr"] }, "score": { "name": "score", @@ -107395,11 +108511,17 @@ "sha256": "09znaxrv14m58hsk5pac458xbpcsidc6ygcsw4q9j0p4yd80qbvl", "depends": ["car", "e1071", "gbm", "ggplot2", "partykit", "randomForest", "reshape2", "sqldf", "stringr"] }, + "scorematchingad": { + "name": "scorematchingad", + "version": "0.0.67", + "sha256": "1dfnnb5fd16i5m6mwxw60jq42cn8migpqmy0s2rbpd9jdg96lwpj", + "depends": ["FixedPoint", "MCMCpack", "R6", "Rcpp", "RcppEigen", "Rdpack", "optimx", "rlang"] + }, "scorepeak": { "name": "scorepeak", "version": "0.1.2", "sha256": "1g9n7kjqb9qk5b7hw8ysrc069w9dzc4z29ay6z1kbm0v4kkzp7bi", - "depends": ["checkmate", "Rcpp"] + "depends": ["Rcpp", "checkmate"] }, "scoring": { "name": "scoring", @@ -107411,7 +108533,7 @@ "name": "scoringRules", "version": "1.1.1", "sha256": "1qy521jhr5mj7999ncz27f3ggld2rqvgy3y3wznk23772xpgjgrr", - "depends": ["knitr", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "knitr"] }, "scoringfunctions": { "name": "scoringfunctions", @@ -107435,25 +108557,25 @@ "name": "scperturbR", "version": "0.1.0", "sha256": "0bddsfms1zaq8hfviw68n5n5mjiwg47hiyzbnnwbimxaamz4rkkb", - "depends": ["dplyr", "energy", "rdist", "Seurat"] + "depends": ["Seurat", "dplyr", "energy", "rdist"] }, "scpi": { "name": "scpi", "version": "2.2.5", "sha256": "12wr7kk57qv28kypk5czr0gv2xfib040m8k5047kdgd4fj3i6fhr", - "depends": ["abind", "CVXR", "doSNOW", "dplyr", "ECOSolveR", "fastDummies", "foreach", "ggplot2", "magrittr", "MASS", "Matrix", "purrr", "Qtools", "reshape2", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["CVXR", "ECOSolveR", "MASS", "Matrix", "Qtools", "abind", "doSNOW", "dplyr", "fastDummies", "foreach", "ggplot2", "magrittr", "purrr", "reshape2", "rlang", "stringr", "tibble", "tidyr"] }, "scplot": { "name": "scplot", - "version": "0.3.3", - "sha256": "09a7nj95jwmp99jcx6jb0pqgmb651xmf1zdmwi1qi62142lxqwvx", + "version": "0.4.0", + "sha256": "0ksk93i7vj616kbzs1i6wrngrzwqjb70imb1vmbk5r5lf9sningn", "depends": ["ggplot2", "mblm", "scan"] }, "scpoisson": { "name": "scpoisson", "version": "0.0.1", "sha256": "0v8is1y9mqbvcvhqay1a0ycbhfxwxqkxifmbxb0sjzxg02mla65x", - "depends": ["broom", "dplyr", "ggplot2", "glmpca", "magrittr", "Matrix", "matrixStats", "purrr", "Rdpack", "Seurat", "SeuratObject", "tidyr", "WGCNA"] + "depends": ["Matrix", "Rdpack", "Seurat", "SeuratObject", "WGCNA", "broom", "dplyr", "ggplot2", "glmpca", "magrittr", "matrixStats", "purrr", "tidyr"] }, "scqe": { "name": "scqe", @@ -107471,7 +108593,7 @@ "name": "scraEP", "version": "1.2", "sha256": "1qkfd4bp3sd3xrh9bdaqwmmvx7f9rvjcch6hi2p387ky04ywwqn4", - "depends": ["data_table", "rvest", "XML", "xml2"] + "depends": ["XML", "data_table", "rvest", "xml2"] }, "scrapeR": { "name": "scrapeR", @@ -107579,7 +108701,7 @@ "name": "sctransform", "version": "0.4.1", "sha256": "0wgimf7qqgnnmyspn2rpb4a8hl570fv0fwh0r0r4qgjlpvwffssz", - "depends": ["dplyr", "future", "future_apply", "ggplot2", "gridExtra", "magrittr", "MASS", "Matrix", "matrixStats", "Rcpp", "RcppArmadillo", "reshape2", "rlang"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "dplyr", "future", "future_apply", "ggplot2", "gridExtra", "magrittr", "matrixStats", "reshape2", "rlang"] }, "scuba": { "name": "scuba", @@ -107597,7 +108719,7 @@ "name": "sdPrior", "version": "1.0-0", "sha256": "0g4crlasnvxz752n3az5jc681jvvj2g87c3a8s2h1i2vh64p5h37", - "depends": ["doParallel", "GB2", "MASS", "mgcv", "mvtnorm", "pscl"] + "depends": ["GB2", "MASS", "doParallel", "mgcv", "mvtnorm", "pscl"] }, "sda": { "name": "sda", @@ -107609,7 +108731,7 @@ "name": "sdafilter", "version": "1.0.0", "sha256": "0y692j25pln46dp6xvaq17fkym0461yqfa6rv5avfw2b240k8jiq", - "depends": ["glasso", "glmnet", "huge", "POET"] + "depends": ["POET", "glasso", "glmnet", "huge"] }, "sdam": { "name": "sdam", @@ -107627,7 +108749,7 @@ "name": "sdcHierarchies", "version": "0.21.0", "sha256": "0ihfddjkqdmzpr62dackblwbjcvbkhzm4ap1xzbn4m8i3z1nlbi0", - "depends": ["cli", "data_table", "jsonlite", "Rcpp", "rlang", "shiny", "shinyjs", "shinythemes", "shinyTree"] + "depends": ["Rcpp", "cli", "data_table", "jsonlite", "rlang", "shiny", "shinyTree", "shinyjs", "shinythemes"] }, "sdcLog": { "name": "sdcLog", @@ -107639,7 +108761,7 @@ "name": "sdcMicro", "version": "5.7.8", "sha256": "18qd30rvhqxyh8sxmajc0cs4wys0wvpl7nqw0dhapjkgygwk5nrq", - "depends": ["car", "carData", "cluster", "data_table", "DT", "e1071", "ggplot2", "haven", "knitr", "MASS", "prettydoc", "Rcpp", "rhandsontable", "rmarkdown", "robustbase", "shiny", "shinyBS", "VIM", "xtable"] + "depends": ["DT", "MASS", "Rcpp", "VIM", "car", "carData", "cluster", "data_table", "e1071", "ggplot2", "haven", "knitr", "prettydoc", "rhandsontable", "rmarkdown", "robustbase", "shiny", "shinyBS", "xtable"] }, "sdcSpatial": { "name": "sdcSpatial", @@ -107651,31 +108773,31 @@ "name": "sdcTable", "version": "0.32.6", "sha256": "15jjc25zmxlhh6jvf1ml9q2ngf3blr6c1rarfsx993i4lbb6lg12", - "depends": ["data_table", "glpkAPI", "knitr", "Matrix", "progress", "Rcpp", "Rglpk", "rlang", "sdcHierarchies", "slam", "SSBtools", "stringr"] + "depends": ["Matrix", "Rcpp", "Rglpk", "SSBtools", "data_table", "glpkAPI", "knitr", "progress", "rlang", "sdcHierarchies", "slam", "stringr"] }, "sde": { "name": "sde", "version": "2.0.18", "sha256": "1rk9wqaam21fipsinag3ychfkl6p7fpgbamr0119v8gjgskajxl8", - "depends": ["fda", "MASS", "zoo"] + "depends": ["MASS", "fda", "zoo"] }, "sdetorus": { "name": "sdetorus", "version": "0.1.10", "sha256": "09y23s5pxrhfv2l4q08vi8rf1nwainyy7dm0aij10sfwr86k0brn", - "depends": ["mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "mvtnorm"] }, "sdm": { "name": "sdm", - "version": "1.2-40", - "sha256": "1mcalw96mpylgi9yalm0pxxcmv9724vaylgkanmx2cbnsjracq2z", + "version": "1.2-46", + "sha256": "035x08bml5d3yw5ikh8kicvlzd2hnv679cpfab3ssib96scd6662", "depends": ["raster", "sp", "terra"] }, "sdmTMB": { "name": "sdmTMB", "version": "0.6.0", "sha256": "0v2kmyppax5f1g1jji7l2m6v49kxj65r81giv84hnkwmcqdzsic8", - "depends": ["assertthat", "cli", "clisymbols", "fishMod", "fmesher", "generics", "lifecycle", "lme4", "Matrix", "mgcv", "mvtnorm", "nlme", "RcppEigen", "rlang", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "assertthat", "cli", "clisymbols", "fishMod", "fmesher", "generics", "lifecycle", "lme4", "mgcv", "mvtnorm", "nlme", "rlang"] }, "sdmpredictors": { "name": "sdmpredictors", @@ -107693,13 +108815,13 @@ "name": "sdpdth", "version": "0.2", "sha256": "1yn8fsjxpbagargf3mv0p23vsgnl64dxfkggrzvfp0ylxsx8nnvc", - "depends": ["Matrix", "matrixcalc", "rCMA", "Rcpp", "RcppArmadillo", "rJava"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "matrixcalc", "rCMA", "rJava"] }, "sdprisk": { "name": "sdprisk", "version": "1.1-6", "sha256": "061x78irryc5phd8bv9cs2mfgiajgwmr85ryp1r47anadydb2haa", - "depends": ["numDeriv", "PolynomF", "rootSolve"] + "depends": ["PolynomF", "numDeriv", "rootSolve"] }, "sdpt3r": { "name": "sdpt3r", @@ -107713,6 +108835,12 @@ "sha256": "1kiq73m1wzqa8d0542nhm2bh7rc0bib0jnrwccawjyxmhm4jix73", "depends": ["pracma", "psych", "tseries"] }, + "sdtmchecks": { + "name": "sdtmchecks", + "version": "1.0.0", + "sha256": "0dpnvyfgvaqj3n4ci7hjqb1mvj3f5hsab4h02vz5q2brx7fq4ll0", + "depends": ["dplyr", "openxlsx", "tidyselect"] + }, "sdtmval": { "name": "sdtmval", "version": "0.4.1", @@ -107729,7 +108857,7 @@ "name": "seacarb", "version": "3.3.3", "sha256": "1xrwvkal60dkj4i6h27dskbliizkz6q476s06627asjacy8vdls3", - "depends": ["gsw", "oce", "SolveSAPHE"] + "depends": ["SolveSAPHE", "gsw", "oce"] }, "sealasso": { "name": "sealasso", @@ -107753,7 +108881,7 @@ "name": "season", "version": "0.3.15", "sha256": "0f63ichlnj49g0ni9560avr4415iyj5061pixkjmqj83y7bbsz22", - "depends": ["ggplot2", "MASS", "survival"] + "depends": ["MASS", "ggplot2", "survival"] }, "seasonal": { "name": "seasonal", @@ -107765,7 +108893,7 @@ "name": "seasonalityPlot", "version": "1.2.1", "sha256": "03gfbpzy97kjw1mxm9xqh384ilyap2nqn4j5ir22rdyg60rfj2mp", - "depends": ["assertthat", "crypto2", "dygraphs", "htmltools", "lubridate", "magrittr", "plotrix", "quantmod", "TTR", "zoo"] + "depends": ["TTR", "assertthat", "crypto2", "dygraphs", "htmltools", "lubridate", "magrittr", "plotrix", "quantmod", "zoo"] }, "seasonalview": { "name": "seasonalview", @@ -107787,15 +108915,15 @@ }, "secr": { "name": "secr", - "version": "4.6.7", - "sha256": "1zr2yp51dx5f8ggvwd9bspa3j08yjh6bpph7mpxqky7cn2clbf9b", - "depends": ["abind", "BH", "MASS", "mgcv", "nlme", "raster", "Rcpp", "RcppEigen", "RcppNumerical", "RcppParallel", "sf", "stringr", "terra"] + "version": "4.6.9", + "sha256": "1rm7hlfwz8wf4551dw79figmx6n968dlyrq1n2agdv5wdv97gjdg", + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppNumerical", "RcppParallel", "abind", "mgcv", "nlme", "raster", "sf", "stringr", "terra"] }, "secrdesign": { "name": "secrdesign", "version": "2.9.1", "sha256": "03aibck9r4rs9cc9rywm8rs9s9swp7wil1xgfgy6fxpxypapqfvx", - "depends": ["abind", "BH", "kofnGA", "Rcpp", "RcppArmadillo", "secr", "sf"] + "depends": ["BH", "Rcpp", "RcppArmadillo", "abind", "kofnGA", "secr", "sf"] }, "secret": { "name": "secret", @@ -107805,8 +108933,8 @@ }, "secretbase": { "name": "secretbase", - "version": "1.0.0", - "sha256": "1lnmkppw6scgdd3qd45jfvnrxx5bsa4b37z212aq6ss7xxjlv8wh", + "version": "1.0.1", + "sha256": "013f9lvsgfr5way2clkrwb1r2s9kvq2d3al68yjmf1lfpdmc1fdb", "depends": [] }, "secrettext": { @@ -107819,19 +108947,19 @@ "name": "secrlinear", "version": "1.2.2", "sha256": "1ivhl5imc7ic72h4v5276d2n02s39j78lcdr0rcx3dqycf3yyqag", - "depends": ["igraph", "MASS", "secr", "sf", "sp"] + "depends": ["MASS", "igraph", "secr", "sf", "sp"] }, "secsse": { "name": "secsse", "version": "3.1.0", "sha256": "0v4qjsjmc7shqx8cy92c99fh6bfy2zdkwi2as05r2h4c2vk3p73z", - "depends": ["ape", "BH", "DDD", "geiger", "ggplot2", "Rcpp", "RcppParallel", "rlang", "tibble", "treestats"] + "depends": ["BH", "DDD", "Rcpp", "RcppParallel", "ape", "geiger", "ggplot2", "rlang", "tibble", "treestats"] }, "sectorgap": { "name": "sectorgap", "version": "0.1.0", "sha256": "0nn9cpy7svil2y9snvk5zznnlqd825gb4kxp31kzwcvwf5frx8q2", - "depends": ["dplyr", "ggplot2", "KFAS", "MCMCpack", "tempdisagg", "tidyr", "zoo"] + "depends": ["KFAS", "MCMCpack", "dplyr", "ggplot2", "tempdisagg", "tidyr", "zoo"] }, "secuTrialR": { "name": "secuTrialR", @@ -107853,15 +108981,15 @@ }, "see": { "name": "see", - "version": "0.8.4", - "sha256": "0xz1n8n232jhp8r8w5isp1nzxscj0fqfm3hxgq6725hm14sl9wqj", + "version": "0.8.5", + "sha256": "1c0pgl9k0m2zdwcz4sf158wpg1gkza1hqcry6hjqql7rg2dga7f8", "depends": ["bayestestR", "correlation", "datawizard", "effectsize", "ggplot2", "insight", "modelbased", "parameters", "performance"] }, "seeclickfixr": { "name": "seeclickfixr", "version": "1.1.0", "sha256": "1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n", - "depends": ["jsonlite", "RCurl"] + "depends": ["RCurl", "jsonlite"] }, "seecolor": { "name": "seecolor", @@ -107877,9 +109005,9 @@ }, "seededlda": { "name": "seededlda", - "version": "1.2.1", - "sha256": "1nvlmfx1ib9ffgippnlgiy7srnc4gasqailvsc0xfyxn70hsz9pb", - "depends": ["Matrix", "proxyC", "quanteda", "Rcpp", "RcppArmadillo", "testthat"] + "version": "1.3.2", + "sha256": "0333b74aiam8k8rgqbbaqqlnh1mbqlyz0lxbpbqpvd2sb50ic3fx", + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "proxyC", "quanteda", "testthat"] }, "seedr": { "name": "seedr", @@ -107897,19 +109025,19 @@ "name": "seeds", "version": "0.9.1", "sha256": "0adk7y5ripg78bwkdgnlfwq9w9h6mlpdrikgbnn5z8az2qahc0in", - "depends": ["callr", "coda", "Deriv", "deSolve", "dplyr", "ggplot2", "Hmisc", "MASS", "matrixStats", "mvtnorm", "pracma", "R_utils", "Ryacas", "statmod", "tidyr"] + "depends": ["Deriv", "Hmisc", "MASS", "R_utils", "Ryacas", "callr", "coda", "deSolve", "dplyr", "ggplot2", "matrixStats", "mvtnorm", "pracma", "statmod", "tidyr"] }, "seeker": { "name": "seeker", "version": "1.1.5", "sha256": "14gxxa7d929ynlrsxz24nprfy1q2x51lh2zxg8wpi3yswphkvd6b", - "depends": ["affy", "AnnotationDbi", "BiocManager", "biomaRt", "checkmate", "curl", "data_table", "foreach", "GEOquery", "glue", "jsonlite", "qs", "R_utils", "RCurl", "readr", "sessioninfo", "tximport", "withr", "yaml"] + "depends": ["AnnotationDbi", "BiocManager", "GEOquery", "RCurl", "R_utils", "affy", "biomaRt", "checkmate", "curl", "data_table", "foreach", "glue", "jsonlite", "qs", "readr", "sessioninfo", "tximport", "withr", "yaml"] }, "seer": { "name": "seer", "version": "1.1.8", "sha256": "13r26iyciq9wbzn4r3447s4j4m6k5sdymp704i6hkf0fphv4340c", - "depends": ["dplyr", "forecast", "forecTheta", "furrr", "future", "magrittr", "purrr", "randomForest", "stringr", "tibble", "tsfeatures", "urca"] + "depends": ["dplyr", "forecTheta", "forecast", "furrr", "future", "magrittr", "purrr", "randomForest", "stringr", "tibble", "tsfeatures", "urca"] }, "seewave": { "name": "seewave", @@ -107921,7 +109049,7 @@ "name": "segMGarch", "version": "1.2", "sha256": "0chw41h25jka9wa3rf3d8dq2ym47379jflv33q6qxaak8xy1kmd9", - "depends": ["corpcor", "doParallel", "fGarch", "foreach", "iterators", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "corpcor", "doParallel", "fGarch", "foreach", "iterators", "mvtnorm"] }, "segRDA": { "name": "segRDA", @@ -107933,19 +109061,19 @@ "name": "segclust2d", "version": "0.3.3", "sha256": "0vsdmlpf9nd8lbv8iwvywrzajbpc76ifvx2fx7mlai1pskgyqfwm", - "depends": ["cli", "dplyr", "ggplot2", "magrittr", "plyr", "RColorBrewer", "Rcpp", "RcppArmadillo", "reshape2", "rlang", "scales", "zoo"] + "depends": ["RColorBrewer", "Rcpp", "RcppArmadillo", "cli", "dplyr", "ggplot2", "magrittr", "plyr", "reshape2", "rlang", "scales", "zoo"] }, "segen": { "name": "segen", "version": "1.1.0", "sha256": "1l60rb1w0rfp1rv5favi4yxzyqs1nb1881mcz66xv789r3awhp11", - "depends": ["entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "Rfast", "scales", "tictoc"] + "depends": ["Rfast", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "scales", "tictoc"] }, "segmag": { "name": "segmag", "version": "1.2.4", "sha256": "1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm", - "depends": ["plyr", "Rcpp"] + "depends": ["Rcpp", "plyr"] }, "segmenTier": { "name": "segmenTier", @@ -107955,15 +109083,15 @@ }, "segmented": { "name": "segmented", - "version": "2.1-0", - "sha256": "1whcch1lw9y5fgy205377hr69xdjmav57z63vzgj7ammihja0yvd", + "version": "2.1-1", + "sha256": "1p83g6qj8y4xblggm12bhr9zpsqbrrc7lbbigxcafhhi9c8v08v7", "depends": ["MASS", "nlme"] }, "segmentr": { "name": "segmentr", "version": "0.2.0", "sha256": "0q5kxxiw0akpk7w2a2l9zp7v4pvqblzdvrld5fjyl5f6h8hsb40z", - "depends": ["foreach", "glue", "Rcpp"] + "depends": ["Rcpp", "foreach", "glue"] }, "segmetric": { "name": "segmetric", @@ -107975,12 +109103,12 @@ "name": "segregation", "version": "1.1.0", "sha256": "1l2dlqva58l9glpsn1bflbggk0645zhsr3a1n1ydikp7q54wf72m", - "depends": ["checkmate", "data_table", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "checkmate", "data_table"] }, "segregatr": { "name": "segregatr", - "version": "0.3.0", - "sha256": "1n6fdq16lymfk49z75y2d9s8n9l0v8i0987cfnxigqz8h5jyzm6x", + "version": "0.4.0", + "sha256": "12par5appi94jliz8lghrhj3q6ws99hw49r2mcgs8g5c0mzgmp4x", "depends": ["pedprobr", "pedtools"] }, "seguid": { @@ -107993,7 +109121,7 @@ "name": "sehrnett", "version": "0.1.0", "sha256": "0nsgaf79cs2fnjb42vzlmbi92290vrlp5bpgg6mnik3yh5fq2ndr", - "depends": ["DBI", "dplyr", "magrittr", "purrr", "RSQLite", "tibble"] + "depends": ["DBI", "RSQLite", "dplyr", "magrittr", "purrr", "tibble"] }, "seismic": { "name": "seismic", @@ -108011,7 +109139,7 @@ "name": "sejmRP", "version": "1.3.4", "sha256": "1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0", - "depends": ["cluster", "DBI", "dplyr", "factoextra", "RPostgreSQL", "rvest", "stringi", "tidyr", "XML", "xml2"] + "depends": ["DBI", "RPostgreSQL", "XML", "cluster", "dplyr", "factoextra", "rvest", "stringi", "tidyr", "xml2"] }, "selcorr": { "name": "selcorr", @@ -108047,7 +109175,7 @@ "name": "selectiveInference", "version": "1.2.5", "sha256": "07kzpvdmflca1sriqfzn20f84fx2b9kwwiqm91lqjpx854bsx5kh", - "depends": ["adaptMCMC", "glmnet", "intervals", "MASS", "Rcpp", "survival"] + "depends": ["MASS", "Rcpp", "adaptMCMC", "glmnet", "intervals", "survival"] }, "selectr": { "name": "selectr", @@ -108071,7 +109199,7 @@ "name": "selenium", "version": "0.1.3", "sha256": "1v1bh9a1ybzwyzfsy7q82cjjaz2011zi9i80y275ayjwdsw1rfyf", - "depends": ["httr2", "jsonlite", "lifecycle", "processx", "R6", "rappdirs", "rlang"] + "depends": ["R6", "httr2", "jsonlite", "lifecycle", "processx", "rappdirs", "rlang"] }, "seleniumPipes": { "name": "seleniumPipes", @@ -108089,7 +109217,7 @@ "name": "sem", "version": "3.1-15", "sha256": "05hk72zxvyv6kkjhk5y6qw253c64108az7030z8j1sz8wq03n0md", - "depends": ["boot", "MASS", "mi"] + "depends": ["MASS", "boot", "mi"] }, "semEff": { "name": "semEff", @@ -108101,7 +109229,7 @@ "name": "semPlot", "version": "1.1.6", "sha256": "0s9bp4pfsllg1k4x8a36yw82fw432dyz0xvmvi8dw9l12q3jkx8i", - "depends": ["colorspace", "corpcor", "igraph", "lavaan", "lisrelToR", "OpenMx", "plyr", "qgraph", "rockchalk", "sem", "XML"] + "depends": ["OpenMx", "XML", "colorspace", "corpcor", "igraph", "lavaan", "lisrelToR", "plyr", "qgraph", "rockchalk", "sem"] }, "semPower": { "name": "semPower", @@ -108149,7 +109277,7 @@ "name": "semfindr", "version": "0.1.8", "sha256": "02p2l5xsy53v6485as8azqamqy6cnjfmxb9zav1wnhm9p7d1f9ss", - "depends": ["ggplot2", "ggrepel", "lavaan", "Matrix", "rlang"] + "depends": ["Matrix", "ggplot2", "ggrepel", "lavaan", "rlang"] }, "semgram": { "name": "semgram", @@ -108167,13 +109295,13 @@ "name": "semiArtificial", "version": "2.4.1", "sha256": "0zsn3r5n7n3dsa02i194lr6ail7mizq9xp8x3kc5k17z4ckcfysd", - "depends": ["cluster", "CORElearn", "flexclust", "fpc", "ks", "logspline", "MASS", "mcclust", "nnet", "robustbase", "RSNNS", "StatMatch", "timeDate"] + "depends": ["CORElearn", "MASS", "RSNNS", "StatMatch", "cluster", "flexclust", "fpc", "ks", "logspline", "mcclust", "nnet", "robustbase", "timeDate"] }, "semicmprskcoxmsm": { "name": "semicmprskcoxmsm", "version": "0.2.0", "sha256": "00nxmyp4g1pxzqrw3zd5il92vinzpy12wnjnpm33nbh4wx2i5356", - "depends": ["fastGHQuad", "ggplot2", "Rcpp", "survival", "twang"] + "depends": ["Rcpp", "fastGHQuad", "ggplot2", "survival", "twang"] }, "semicontMANOVA": { "name": "semicontMANOVA", @@ -108185,7 +109313,7 @@ "name": "semidist", "version": "0.1.0", "sha256": "0bgl7z78psd2b3v4c4fzhq0r8w0zfn408ji21cw1x7h87dg70qr2", - "depends": ["energy", "FNN", "furrr", "purrr", "Rcpp", "RcppArmadillo"] + "depends": ["FNN", "Rcpp", "RcppArmadillo", "energy", "furrr", "purrr"] }, "seminr": { "name": "seminr", @@ -108197,7 +109325,13 @@ "name": "semlbci", "version": "0.11.2", "sha256": "131nbwq8g0l2imbjv61l83c5avhwqndhdgwkaf0hj0h6a0qwvhqa", - "depends": ["callr", "ggplot2", "ggrepel", "lavaan", "MASS", "nloptr", "pbapply", "rlang"] + "depends": ["MASS", "callr", "ggplot2", "ggrepel", "lavaan", "nloptr", "pbapply", "rlang"] + }, + "semlrtp": { + "name": "semlrtp", + "version": "0.1.1", + "sha256": "089hw80rwi4rxlz1b04jyylc7rnqpv6b1nl89w6pzdkk0dv98h4g", + "depends": ["lavaan", "pbapply"] }, "semmcci": { "name": "semmcci", @@ -108221,7 +109355,7 @@ "name": "semnova", "version": "0.1-6", "sha256": "1vghf8gy0vahwn3nq752wm0rbj33jdy69yqjzin94sk8xa42d0wi", - "depends": ["lavaan", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "lavaan"] }, "semptools": { "name": "semptools", @@ -108239,19 +109373,19 @@ "name": "semtree", "version": "0.9.20", "sha256": "1dcxnlnl5j9dha5bdmj4rn117cbssdzp1gwdnch2pc0234ziq4ys", - "depends": ["clisymbols", "cluster", "crayon", "data_table", "expm", "future_apply", "ggplot2", "gridBase", "lavaan", "OpenMx", "rpart", "rpart_plot", "sandwich", "strucchange", "tidyr", "zoo"] + "depends": ["OpenMx", "clisymbols", "cluster", "crayon", "data_table", "expm", "future_apply", "ggplot2", "gridBase", "lavaan", "rpart", "rpart_plot", "sandwich", "strucchange", "tidyr", "zoo"] }, "semver": { "name": "semver", "version": "0.2.0", "sha256": "10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy", - "depends": ["assertthat", "Rcpp"] + "depends": ["Rcpp", "assertthat"] }, "semverutils": { "name": "semverutils", "version": "0.1.0", "sha256": "0y3zh8n8bgs3ag8yy9cnp0i0xrn0iqflcbrya70glyb40148w9sw", - "depends": ["foreach", "R6"] + "depends": ["R6", "foreach"] }, "sendgridr": { "name": "sendgridr", @@ -108263,7 +109397,7 @@ "name": "sendigR", "version": "1.0.0", "sha256": "0zc9hbxfvgb9dgmyqj5dsm2pcfykx6sk3wjcbxmpk7shyb34b6yl", - "depends": ["cicerone", "data_table", "DescTools", "dplyr", "DT", "ggplot2", "haven", "Hmisc", "htmltools", "magrittr", "parsedate", "plotly", "readxl", "reticulate", "RSQLite", "shiny", "shinydashboard", "sjlabelled", "stringr", "xfun"] + "depends": ["DT", "DescTools", "Hmisc", "RSQLite", "cicerone", "data_table", "dplyr", "ggplot2", "haven", "htmltools", "magrittr", "parsedate", "plotly", "readxl", "reticulate", "shiny", "shinydashboard", "sjlabelled", "stringr", "xfun"] }, "sendmailR": { "name": "sendmailR", @@ -108279,14 +109413,14 @@ }, "sense": { "name": "sense", - "version": "1.0.0", - "sha256": "09idl88n6jlgbn5apgk0vr1bwmqi624ikv1qfx7hvyi79ixg49f4", - "depends": ["bbotk", "data_table", "forcats", "lubridate", "Metrics", "mlr3", "mlr3filters", "mlr3learners", "mlr3pipelines", "mlr3tuning", "mlr3viz", "paradox", "purrr", "readr", "tictoc", "visNetwork"] + "version": "1.1.0", + "sha256": "10cvjhvzfz1y8372wryxxzi0p6xlcchgdhs8idjgk3isvjbps953", + "depends": ["Metrics", "bbotk", "data_table", "forcats", "lubridate", "mlr3", "mlr3filters", "mlr3learners", "mlr3pipelines", "mlr3tuning", "mlr3viz", "paradox", "purrr", "readr", "tictoc", "visNetwork"] }, "sensemakr": { "name": "sensemakr", - "version": "0.1.4", - "sha256": "1bwc4m9fz250iyq5rl63ncgnb5f9490aas8gp51r7yljagq584va", + "version": "0.1.6", + "sha256": "1r4vmprwq91bda9klmw6aaqg1fklqs9da094ggf6qx7lh4kvj9xz", "depends": [] }, "sensiPhy": { @@ -108305,7 +109439,7 @@ "name": "sensitivity", "version": "1.30.0", "sha256": "1larcjjl3yy8rk448m0k77h9bc1mfsm7n8wxf6i2ig2fbyh1rlkl", - "depends": ["boot", "dtwclust", "foreach", "ggplot2", "numbers", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "boot", "dtwclust", "foreach", "ggplot2", "numbers"] }, "sensitivity2x2xk": { "name": "sensitivity2x2xk", @@ -108353,13 +109487,13 @@ "name": "sensobol", "version": "1.1.5", "sha256": "0vw53aqlgdqncy8cpwlc959bavrsfqam7yq99ic6ij8kxqf4h9xl", - "depends": ["boot", "data_table", "deSolve", "ggplot2", "lhs", "magrittr", "matrixStats", "randtoolbox", "Rcpp", "RcppArmadillo", "Rdpack", "Rfast", "rlang", "scales", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "Rfast", "boot", "data_table", "deSolve", "ggplot2", "lhs", "magrittr", "matrixStats", "randtoolbox", "rlang", "scales", "stringr"] }, "sensory": { "name": "sensory", "version": "1.1", "sha256": "1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7", - "depends": ["gtools", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "gtools"] }, "senstrat": { "name": "senstrat", @@ -108389,13 +109523,13 @@ "name": "sentometrics", "version": "1.0.0", "sha256": "06qvwfgshr70n1qgf2zqjvycwwrak8d5hfyn3v5k2qzkfaxkihmm", - "depends": ["caret", "data_table", "foreach", "ggplot2", "glmnet", "ISOweek", "quanteda", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppRoll", "stringi"] + "depends": ["ISOweek", "Rcpp", "RcppArmadillo", "RcppParallel", "RcppRoll", "caret", "data_table", "foreach", "ggplot2", "glmnet", "quanteda", "stringi"] }, "sentopics": { "name": "sentopics", "version": "0.7.3", "sha256": "1n9z2k4nwzd7j2nliar4v1as1vixx6cbmcysf4phjmh7qfay8bqk", - "depends": ["data_table", "generics", "quanteda", "Rcpp", "RcppArmadillo", "RcppHungarian", "RcppProgress"] + "depends": ["Rcpp", "RcppArmadillo", "RcppHungarian", "RcppProgress", "data_table", "generics", "quanteda"] }, "sentryR": { "name": "sentryR", @@ -108407,13 +109541,13 @@ "name": "separationplot", "version": "1.4", "sha256": "1dvm073mckn6mkyf6fvclc8glsr8d3p2413x5i91w00hphm2lg8z", - "depends": ["foreign", "Hmisc", "MASS", "RColorBrewer"] + "depends": ["Hmisc", "MASS", "RColorBrewer", "foreign"] }, "sephora": { "name": "sephora", "version": "0.1.31", "sha256": "1axh5qd8mp55d45k34935sm0wc6ib4b309a92d1vaxz3hzgvbygi", - "depends": ["doParallel", "dplyr", "dtwclust", "eBsc", "foreach", "geoTS", "ggnewscale", "ggplot2", "MASS", "nlme", "rootSolve", "spiralize"] + "depends": ["MASS", "doParallel", "dplyr", "dtwclust", "eBsc", "foreach", "geoTS", "ggnewscale", "ggplot2", "nlme", "rootSolve", "spiralize"] }, "sepkoski": { "name": "sepkoski", @@ -108431,7 +109565,7 @@ "name": "seqHMM", "version": "1.2.6", "sha256": "17rphq6n2pzgxma0v27vaixi4a343gzc6sk15czfd96kfz7m0gad", - "depends": ["gridBase", "igraph", "Matrix", "nloptr", "numDeriv", "Rcpp", "RcppArmadillo", "TraMineR"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "TraMineR", "gridBase", "igraph", "nloptr", "numDeriv"] }, "seqICP": { "name": "seqICP", @@ -108445,12 +109579,6 @@ "sha256": "1p1flpw055jb135jpqlgdyyn19p6hwiqj9kx085irlyczi5kiimi", "depends": ["dplyr", "haven"] }, - "seqest": { - "name": "seqest", - "version": "1.0.1", - "sha256": "06zk87n26305m0hy6lg7v3bpxmsqvinwkvw3dvmzkqp5jdkhwikb", - "depends": ["foreach", "geepack", "MASS", "mvtnorm", "nnet", "Rcpp", "RcppArmadillo", "VGAM"] - }, "seqgendiff": { "name": "seqgendiff", "version": "1.2.4", @@ -108467,7 +109595,7 @@ "name": "seqimpute", "version": "2.0.0", "sha256": "1g60drnx12j6wzkisxlmhidvqzzgsrmmmmp8dljq94bb5iv8xjmz", - "depends": ["Amelia", "cluster", "dfidx", "doRNG", "doSNOW", "dplyr", "foreach", "mice", "mlr", "nnet", "plyr", "ranger", "rms", "stringr", "TraMineR", "TraMineRextras"] + "depends": ["Amelia", "TraMineR", "TraMineRextras", "cluster", "dfidx", "doRNG", "doSNOW", "dplyr", "foreach", "mice", "mlr", "nnet", "plyr", "ranger", "rms", "stringr"] }, "seqinr": { "name": "seqinr", @@ -108503,7 +109631,7 @@ "name": "seqtrie", "version": "0.2.8", "sha256": "12pkcb5ylqlr7ljzrwna6fjqvnikgvsr7k664bw6xkbx1g370s2a", - "depends": ["BH", "dplyr", "R6", "Rcpp", "RcppParallel", "rlang", "stringi"] + "depends": ["BH", "R6", "Rcpp", "RcppParallel", "dplyr", "rlang", "stringi"] }, "sequoia": { "name": "sequoia", @@ -108515,7 +109643,7 @@ "name": "sergeant", "version": "0.9.1", "sha256": "0mgrrlny1qfddznyc34awh8vkbjnyskbyqrxszdhsm2c5wgp2nwh", - "depends": ["bit64", "DBI", "dbplyr", "dplyr", "htmltools", "httr", "jsonlite", "magrittr", "purrr", "readr", "scales", "stringi", "tibble"] + "depends": ["DBI", "bit64", "dbplyr", "dplyr", "htmltools", "httr", "jsonlite", "magrittr", "purrr", "readr", "scales", "stringi", "tibble"] }, "serial": { "name": "serial", @@ -108527,7 +109655,7 @@ "name": "seriation", "version": "1.5.5", "sha256": "0v84pic838rpbcmrz8ip466aagz57vmzlgfk0vkhlcv8zn34r0zp", - "depends": ["ca", "cluster", "colorspace", "foreach", "gclus", "MASS", "qap", "registry", "TSP", "vegan"] + "depends": ["MASS", "TSP", "ca", "cluster", "colorspace", "foreach", "gclus", "qap", "registry", "vegan"] }, "serieslcb": { "name": "serieslcb", @@ -108535,6 +109663,12 @@ "sha256": "1ip4k2xzg06hwsni62ai1whs1zzhwlf94507inpfpqz3jmmafrhq", "depends": ["gplots", "shiny"] }, + "serocalculator": { + "name": "serocalculator", + "version": "1.0.3", + "sha256": "1cxwii35gp9dybjp2989wbmsrv9f3s1qxrrsl4s57lj3q1by2kpk", + "depends": ["Rcpp", "cli", "doParallel", "dplyr", "foreach", "ggplot2", "ggpubr", "lifecycle", "magrittr", "mixtools", "rlang", "rngtools", "scales", "tibble", "tidyr"] + }, "serp": { "name": "serp", "version": "0.2.4", @@ -108543,8 +109677,8 @@ }, "serpstatr": { "name": "serpstatr", - "version": "0.2.1", - "sha256": "09yzxkwgargd42f0bngv6jzhd8arzbvwj2js7lb9yf7vhjq1xv5f", + "version": "0.3.0", + "sha256": "087rlfqdx74rx9fil4lgchl0v8mzs3ld46ji89nx885913wfhjf2", "depends": ["httr"] }, "serrsBayes": { @@ -108615,9 +109749,9 @@ }, "sevenbridges2": { "name": "sevenbridges2", - "version": "0.1.0", - "sha256": "1z3sp85jvqzzf6szi2bz69wyp44spvc0r2gm81shak2fk5z8460f", - "depends": ["checkmate", "cli", "curl", "data_table", "DescTools", "glue", "httr", "jsonlite", "purrr", "R6", "readr", "rlang", "stringr", "yaml"] + "version": "0.2.0", + "sha256": "065r7qggr3hb4jzwbw5sfkimyvaqr9pgyqa5k7aagmy5xdsgzczp", + "depends": ["DescTools", "R6", "checkmate", "cli", "curl", "data_table", "glue", "httr", "jsonlite", "purrr", "readr", "rlang", "stringr", "yaml"] }, "sever": { "name": "sever", @@ -108629,19 +109763,19 @@ "name": "sewage", "version": "0.2.5", "sha256": "171rd59w90q29a9ywdx5225gw6m57bz9rcj25ql38jk62xdmrx69", - "depends": ["cli", "DiagrammeR", "glue"] + "depends": ["DiagrammeR", "cli", "glue"] }, "sf": { "name": "sf", "version": "1.0-16", "sha256": "11wrbaj5s0dqbnh1mfm03l7xi9flzx8grgbkqxrs1wnd2481jvp9", - "depends": ["classInt", "DBI", "magrittr", "Rcpp", "s2", "units"] + "depends": ["DBI", "Rcpp", "classInt", "magrittr", "s2", "units"] }, "sfaR": { "name": "sfaR", "version": "1.0.0", "sha256": "1c7rnnsmdlhby765avb8134f7424qf0b8gdl5q6vz3ialalfg49d", - "depends": ["cubature", "fastGHQuad", "Formula", "marqLevAlg", "maxLik", "mnorm", "nleqslv", "plm", "qrng", "randtoolbox", "sandwich", "texreg", "trustOptim", "ucminf"] + "depends": ["Formula", "cubature", "fastGHQuad", "marqLevAlg", "maxLik", "mnorm", "nleqslv", "plm", "qrng", "randtoolbox", "sandwich", "texreg", "trustOptim", "ucminf"] }, "sfadv": { "name": "sfadv", @@ -108665,13 +109799,13 @@ "name": "sfcentral", "version": "0.1.0", "sha256": "1jvdyalrvk7kzrkwm19fhqrqy1ji6jmz1jp5xdq36myamkj790lg", - "depends": ["geodist", "Hmisc", "lwgeom", "scales", "sf"] + "depends": ["Hmisc", "geodist", "lwgeom", "scales", "sf"] }, "sfcr": { "name": "sfcr", "version": "0.2.1", "sha256": "05ip1z6rh0k7az0y7nwp9c6rv1s53i0i698yfhx46lfnhzz87anf", - "depends": ["dplyr", "expm", "forcats", "igraph", "kableExtra", "magrittr", "purrr", "Rcpp", "RcppArmadillo", "Rdpack", "rlang", "rootSolve", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "dplyr", "expm", "forcats", "igraph", "kableExtra", "magrittr", "purrr", "rlang", "rootSolve", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "sfd": { "name": "sfd", @@ -108683,7 +109817,7 @@ "name": "sfdct", "version": "0.3.0", "sha256": "1v86s8nb021swfq53jmj3vjcyjkzm8aqjlw55xjjxsk29rmq4694", - "depends": ["dplyr", "RTriangle", "sf", "sp", "tibble"] + "depends": ["RTriangle", "dplyr", "sf", "sp", "tibble"] }, "sfdep": { "name": "sfdep", @@ -108695,13 +109829,13 @@ "name": "sfheaders", "version": "0.4.4", "sha256": "01xxp7lpf333djs0lifnnhk5akv8prk0r5mq0ilynyyhn5kzwpzn", - "depends": ["geometries", "Rcpp"] + "depends": ["Rcpp", "geometries"] }, "sfhotspot": { "name": "sfhotspot", "version": "0.8.0", "sha256": "17vlayqqhv59p9mhrxzxs5r6gfqd6wyyi1k6p05n2sd9c06jzadb", - "depends": ["ggplot2", "rlang", "sf", "SpatialKDE", "spdep", "tibble"] + "depends": ["SpatialKDE", "ggplot2", "rlang", "sf", "spdep", "tibble"] }, "sfinx": { "name": "sfinx", @@ -108737,7 +109871,7 @@ "name": "sft", "version": "2.2-1", "sha256": "0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33", - "depends": ["fda", "SuppDists"] + "depends": ["SuppDists", "fda"] }, "sftime": { "name": "sftime", @@ -108767,7 +109901,7 @@ "name": "sgat", "version": "0.9", "sha256": "14sniq5yfh7xmbnd8d0ighw97352qjgfdg587a6hxafisx9is61p", - "depends": ["data_table", "dplyr", "plyr", "qdapRegex", "RCurl", "RSelenium", "stringr"] + "depends": ["RCurl", "RSelenium", "data_table", "dplyr", "plyr", "qdapRegex", "stringr"] }, "sgboost": { "name": "sgboost", @@ -108779,7 +109913,7 @@ "name": "sgd", "version": "1.1.2", "sha256": "0spcv9dysl2vlgrpjxicai9nkg7hylf2wci45pjpl8jph6yj8c70", - "depends": ["BH", "bigmemory", "ggplot2", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "MASS", "Rcpp", "RcppArmadillo", "bigmemory", "ggplot2"] }, "sgee": { "name": "sgee", @@ -108797,13 +109931,13 @@ "name": "sglasso", "version": "1.2.6", "sha256": "01162sh2cndqhcyswk7qprsychxik1yvkk7lr7d5vf25sq85h1k1", - "depends": ["igraph", "Matrix"] + "depends": ["Matrix", "igraph"] }, "sglg": { "name": "sglg", "version": "0.2.2", "sha256": "0h1f31ksygg4cpsnqi87lknxyv39mygjj7sirwgxdha6wmzhl1dc", - "depends": ["AdequacyModel", "Formula", "ggplot2", "gridExtra", "magrittr", "moments", "plot3D", "plotly", "pracma", "progress", "Rcpp", "survival", "TeachingSampling"] + "depends": ["AdequacyModel", "Formula", "Rcpp", "TeachingSampling", "ggplot2", "gridExtra", "magrittr", "moments", "plot3D", "plotly", "pracma", "progress", "survival"] }, "sglr": { "name": "sglr", @@ -108815,7 +109949,7 @@ "name": "sgmodel", "version": "0.1.2", "sha256": "1aq2klppwv1hn1nmicfxmb3vnkfw5jnmaa8gxxz4gnkk59k5rxpr", - "depends": ["ggplot2", "ramify", "Rtauchen"] + "depends": ["Rtauchen", "ggplot2", "ramify"] }, "sgo": { "name": "sgo", @@ -108825,8 +109959,8 @@ }, "sgof": { "name": "sgof", - "version": "2.3.4", - "sha256": "11y3c77yvq3xl3l596zgc1da4jdicyrrxn751dxh5ha21y98w31m", + "version": "2.3.5", + "sha256": "028gas18jrfg6ww5r0p32am7x0rjk0a9bcb84pdg9k091dz4b120", "depends": ["poibin"] }, "sgolay": { @@ -108851,19 +109985,19 @@ "name": "sgraph", "version": "1.0.0", "sha256": "07kqgzdfhkmannx5kpnmm2hrw74ywpnbi9964628lk82pi9g8la9", - "depends": ["cowplot", "ggplot2", "htmlwidgets", "igraph", "jsonlite", "magrittr", "RColorBrewer", "stringi"] + "depends": ["RColorBrewer", "cowplot", "ggplot2", "htmlwidgets", "igraph", "jsonlite", "magrittr", "stringi"] }, "sgs": { "name": "sgs", - "version": "0.1.1", - "sha256": "0glyxlimh97qyhjsqkal05ncjmr6wqa00y9fa4j9ilkqyq6nn0jq", - "depends": ["caret", "faux", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rlab", "SLOPE"] + "version": "0.2.0", + "sha256": "1vkg7pw83hf12j8sjxpc9n6c6cpc7w2llry263lcw7a6293j69vr", + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "Rlab", "SLOPE", "caret", "faux"] }, "sgsR": { "name": "sgsR", "version": "1.4.5", "sha256": "1ircbwlc6ysv8v8vxn5snjqx47qhi5rdqyd3vvf3cx54jndsnvah", - "depends": ["BalancedSampling", "clhs", "dplyr", "ggplot2", "SamplingBigData", "sf", "spatstat_geom", "terra", "tidyr"] + "depends": ["BalancedSampling", "SamplingBigData", "clhs", "dplyr", "ggplot2", "sf", "spatstat_geom", "terra", "tidyr"] }, "sgstar": { "name": "sgstar", @@ -108891,8 +110025,8 @@ }, "shadowtext": { "name": "shadowtext", - "version": "0.1.3", - "sha256": "109bq4d3j7vw6rcj9cjby955bdzgghkxwvwrb974xqq16kzzc6l6", + "version": "0.1.4", + "sha256": "1s3fsh6cmblyhlqrswialc9437as306ki36dyx0dv4001slvxl47", "depends": ["ggplot2", "scales"] }, "shape": { @@ -108911,7 +110045,7 @@ "name": "shapeR", "version": "1.0-1", "sha256": "02al1g9ycfb63mcx4s16abniggl825ihjanx6silbpv6dn6g1ms8", - "depends": ["jpeg", "MASS", "pixmap", "plotrix", "vegan", "wavethresh"] + "depends": ["MASS", "jpeg", "pixmap", "plotrix", "vegan", "wavethresh"] }, "shapefiles": { "name": "shapefiles", @@ -108941,7 +110075,7 @@ "name": "shapr", "version": "0.2.2", "sha256": "0c8vivr1ia7x4jvdsffv06nl2yahxx38r5xbws5cdkalhbhlwv4h", - "depends": ["condMVNorm", "data_table", "Matrix", "mvnfast", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "condMVNorm", "data_table", "mvnfast"] }, "shapviz": { "name": "shapviz", @@ -108959,7 +110093,7 @@ "name": "sharp", "version": "1.4.6", "sha256": "0sa0l5bnglmbm4ykmna1z1b1janggpah8g29505n4pfabw0r4lpl", - "depends": ["abind", "beepr", "fake", "future", "future_apply", "glassoFast", "glmnet", "igraph", "mclust", "nloptr", "plotrix", "Rdpack", "withr"] + "depends": ["Rdpack", "abind", "beepr", "fake", "future", "future_apply", "glassoFast", "glmnet", "igraph", "mclust", "nloptr", "plotrix", "withr"] }, "sharpData": { "name": "sharpData", @@ -108971,13 +110105,13 @@ "name": "sharpPen", "version": "1.9", "sha256": "0ra1iq6bfiy87arj7nb4s4adiji3pcp7vrjhsfbm2agfw05k4zj4", - "depends": ["glmnet", "KernSmooth", "locpol", "Matrix", "np"] + "depends": ["KernSmooth", "Matrix", "glmnet", "locpol", "np"] }, "sharpeRratio": { "name": "sharpeRratio", "version": "1.4.3", "sha256": "0ndqckz7pi099yynzfwzcbz9jcz93bb9jcd2a4px2sjbagfmx7ag", - "depends": ["ghyp", "Rcpp"] + "depends": ["Rcpp", "ghyp"] }, "sharpr2": { "name": "sharpr2", @@ -108989,25 +110123,25 @@ "name": "sharpshootR", "version": "2.3.1", "sha256": "1cvq2wh05dkaijkmwm20bs7xcmcv0xwv1gcf535xnd9gkzpy8xdr", - "depends": ["ape", "aqp", "circular", "cluster", "curl", "digest", "e1071", "lattice", "plyr", "RColorBrewer", "reshape2", "scales", "soilDB", "stringi"] + "depends": ["RColorBrewer", "ape", "aqp", "circular", "cluster", "curl", "digest", "e1071", "lattice", "plyr", "reshape2", "scales", "soilDB", "stringi"] }, "sharx": { "name": "sharx", "version": "1.0-6", "sha256": "0fyz7m8zx2i4r1kj5svzmn6l43f7zg2sj4c3ynyjwa1lzi5wf75v", - "depends": ["dclone", "dcmle", "Formula"] + "depends": ["Formula", "dclone", "dcmle"] }, "shattering": { "name": "shattering", "version": "1.0.7", "sha256": "0dmb57pdgzwm001gfm1zm8ba7x71bp2vjk4ml0cy4r05hpdswfh3", - "depends": ["e1071", "FNN", "NMF", "pdist", "pracma", "rmarkdown", "Ryacas", "slam"] + "depends": ["FNN", "NMF", "Ryacas", "e1071", "pdist", "pracma", "rmarkdown", "slam"] }, "shazam": { "name": "shazam", "version": "1.2.0", "sha256": "16bkwm903v4hv6ng6ncfzax2s5x8qfa4ldlwzclry7iggniq7dzh", - "depends": ["alakazam", "ape", "diptest", "doParallel", "dplyr", "foreach", "ggplot2", "igraph", "iterators", "KernSmooth", "lazyeval", "MASS", "progress", "rlang", "scales", "seqinr", "stringi", "tidyr", "tidyselect"] + "depends": ["KernSmooth", "MASS", "alakazam", "ape", "diptest", "doParallel", "dplyr", "foreach", "ggplot2", "igraph", "iterators", "lazyeval", "progress", "rlang", "scales", "seqinr", "stringi", "tidyr", "tidyselect"] }, "shelltrace": { "name": "shelltrace", @@ -109029,9 +110163,9 @@ }, "shide": { "name": "shide", - "version": "0.2.0", - "sha256": "1czdl0i93plqc1d2cf874603s4fiym96kv4d23vr1kvy2kx1jnh9", - "depends": ["cpp11", "rlang", "tzdb", "vctrs"] + "version": "0.2.1", + "sha256": "0wf84npx431c9hb09yxgbi0w1apzrfh7qisamlybvq3mhs8aaqdr", + "depends": ["cli", "cpp11", "rlang", "tzdb", "vctrs"] }, "shiftR": { "name": "shiftR", @@ -109043,13 +110177,13 @@ "name": "shinipsum", "version": "0.1.1", "sha256": "1l6skq9y5417x174l7svbvvlh10vv5kdnp2s4q7g76l62y710ks4", - "depends": ["attempt", "DT", "dygraphs", "ggplot2", "magrittr", "plotly"] + "depends": ["DT", "attempt", "dygraphs", "ggplot2", "magrittr", "plotly"] }, "shiny": { "name": "shiny", - "version": "1.8.1.1", - "sha256": "0lv7wfbmv72ilckm46dvkc0cg6qzih9iy4793h4w5qjhsysmz3d3", - "depends": ["bslib", "cachem", "commonmark", "crayon", "fastmap", "fontawesome", "glue", "htmltools", "httpuv", "jsonlite", "later", "lifecycle", "mime", "promises", "R6", "rlang", "sourcetools", "withr", "xtable"] + "version": "1.9.1", + "sha256": "1qsllqmkhhcddzsi26f1b2q0jcnmbxkjvq70w8nnaz8j9whnljw5", + "depends": ["R6", "bslib", "cachem", "commonmark", "crayon", "fastmap", "fontawesome", "glue", "htmltools", "httpuv", "jsonlite", "later", "lifecycle", "mime", "promises", "rlang", "sourcetools", "withr", "xtable"] }, "shiny_benchmark": { "name": "shiny.benchmark", @@ -109067,7 +110201,7 @@ "name": "shiny.emptystate", "version": "0.1.0", "sha256": "07vw8dw6yv3gqp400h2b1x2nv2v3hzgfgmhb8fxxdicbx08vxv47", - "depends": ["fontawesome", "htmltools", "R6", "shiny"] + "depends": ["R6", "fontawesome", "htmltools", "shiny"] }, "shiny_exe": { "name": "shiny.exe", @@ -109085,7 +110219,7 @@ "name": "shiny.i18n", "version": "0.3.0", "sha256": "0kcdvan8ds1kdqdxk6yvqpxlxv6xj4nxr8mp1qns3fzklyf4n4gy", - "depends": ["glue", "jsonlite", "R6", "rstudioapi", "shiny", "stringr", "yaml"] + "depends": ["R6", "glue", "jsonlite", "rstudioapi", "shiny", "stringr", "yaml"] }, "shiny_info": { "name": "shiny.info", @@ -109109,7 +110243,7 @@ "name": "shiny.reglog", "version": "0.5.2", "sha256": "018dnnisidmn799api7kgwknvm3ka2sk1vvq2wcx65acqc450i18", - "depends": ["dplyr", "lifecycle", "lubridate", "R6", "scrypt", "shiny", "shinyjs", "stringi", "uuid"] + "depends": ["R6", "dplyr", "lifecycle", "lubridate", "scrypt", "shiny", "shinyjs", "stringi", "uuid"] }, "shiny_router": { "name": "shiny.router", @@ -109121,7 +110255,7 @@ "name": "shiny.semantic", "version": "0.5.1", "sha256": "1gfkwgij365j0i9wz7dqdadpa9mdarn8n70cygm46fcak7lp08h8", - "depends": ["glue", "htmltools", "htmlwidgets", "jsonlite", "magrittr", "purrr", "R6", "semantic_assets", "shiny"] + "depends": ["R6", "glue", "htmltools", "htmlwidgets", "jsonlite", "magrittr", "purrr", "semantic_assets", "shiny"] }, "shiny_tailwind": { "name": "shiny.tailwind", @@ -109131,15 +110265,15 @@ }, "shiny_telemetry": { "name": "shiny.telemetry", - "version": "0.2.0", - "sha256": "0kp0wb3rh501bg7y8r90bwy1bbz5skmlvfjsqxj3nc1gpanndbjs", - "depends": ["checkmate", "digest", "dplyr", "glue", "httr2", "jsonlite", "logger", "lubridate", "odbc", "purrr", "R6", "rlang", "RSQLite", "shiny", "tidyr"] + "version": "0.3.0", + "sha256": "190cpxx9ddapixv8ci6xkabmyb0i8qb1kak49c286p43psm6dy66", + "depends": ["R6", "RSQLite", "checkmate", "digest", "dplyr", "glue", "htmltools", "httr2", "jsonlite", "lifecycle", "logger", "lubridate", "odbc", "purrr", "rlang", "shiny", "stringr", "tidyr"] }, "shiny_worker": { "name": "shiny.worker", "version": "0.0.1", "sha256": "1l30dx46s3q1x9nd42r6dracd3lqkjk80r9jyjqy8lmdsq48300i", - "depends": ["future", "R6", "shiny"] + "depends": ["R6", "future", "shiny"] }, "shinyAce": { "name": "shinyAce", @@ -109169,7 +110303,7 @@ "name": "shinyChatR", "version": "1.2.0", "sha256": "174jm8a52h7lr4bvl88ajllhknzczq8lwvbrldh07hiphbid071d", - "depends": ["data_table", "DBI", "purrr", "R6", "shiny"] + "depends": ["DBI", "R6", "data_table", "purrr", "shiny"] }, "shinyCohortBuilder": { "name": "shinyCohortBuilder", @@ -109209,9 +110343,9 @@ }, "shinyExprPortal": { "name": "shinyExprPortal", - "version": "1.1.0", - "sha256": "0740qzwz2wcl5avby2x50kjg51la6nfzz92lfk2ysnfvq58ph6aa", - "depends": ["bslib", "cli", "config", "data_table", "dplyr", "DT", "htmltools", "iheatmapr", "markdown", "qvalue", "Rfast", "rlang", "shiny", "shinyhelper", "tidyr", "vegawidget", "yaml"] + "version": "1.2.1", + "sha256": "1cldz5m7w3db3izgqcpichpixfixhdy7rz4iksnsdywih0kdhqwc", + "depends": ["DT", "Rfast", "bslib", "cli", "config", "data_table", "dplyr", "htmltools", "iheatmapr", "markdown", "qvalue", "rlang", "shiny", "shinyhelper", "tidyr", "vegawidget", "yaml"] }, "shinyFeedback": { "name": "shinyFeedback", @@ -109247,7 +110381,7 @@ "name": "shinyHugePlot", "version": "0.2.6", "sha256": "1sf26jz2jbyrs11a1gricnb3iq4106cpf10kbhqx0hy12q47lk1y", - "depends": ["assertthat", "bit64", "data_table", "dplyr", "htmltools", "jsonlite", "lazyeval", "nanotime", "plotly", "purrr", "R6", "rlang", "shiny", "shinyjs", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["R6", "assertthat", "bit64", "data_table", "dplyr", "htmltools", "jsonlite", "lazyeval", "nanotime", "plotly", "purrr", "rlang", "shiny", "shinyjs", "stringr", "tibble", "tidyr", "tidyselect"] }, "shinyIRT": { "name": "shinyIRT", @@ -109265,7 +110399,7 @@ "name": "shinyKGode", "version": "1.0.5", "sha256": "004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1", - "depends": ["ggplot2", "gridExtra", "KGode", "mvtnorm", "pracma", "pspline", "reshape2", "shiny", "shinyjs", "XML"] + "depends": ["KGode", "XML", "ggplot2", "gridExtra", "mvtnorm", "pracma", "pspline", "reshape2", "shiny", "shinyjs"] }, "shinyKnobs": { "name": "shinyKnobs", @@ -109279,11 +110413,17 @@ "sha256": "1cdi9dbaz1q71c0wb5a910xz3rspqgqxdk14ibhh06lb0hs9n4nc", "depends": ["shiny"] }, + "shinyLottie": { + "name": "shinyLottie", + "version": "1.0.0", + "sha256": "1fs1cpi7qab8zqb4jn3lw4bpan3434m6jdy6zj7vbzfibdj0y2wf", + "depends": ["glue", "htmltools", "jsonlite", "shiny"] + }, "shinyML": { "name": "shinyML", "version": "1.0.1", "sha256": "086iavycv1gd6scfsixf7cmw0s5a4dc6x5cylfasxrzgiixd76c9", - "depends": ["argonDash", "argonR", "data_table", "dplyr", "DT", "dygraphs", "ggplot2", "h2o", "lubridate", "plotly", "shiny", "shinycssloaders", "shinyjs", "shinyWidgets", "sparklyr", "tidyr"] + "depends": ["DT", "argonDash", "argonR", "data_table", "dplyr", "dygraphs", "ggplot2", "h2o", "lubridate", "plotly", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs", "sparklyr", "tidyr"] }, "shinyMatrix": { "name": "shinyMatrix", @@ -109307,7 +110447,7 @@ "name": "shinyMolBio", "version": "0.2", "sha256": "09lq5pvis450il1agcq5n9cilnq84rfv08w2dz1d0bbq1qgrgnvg", - "depends": ["checkmate", "dplyr", "plotly", "purrr", "RColorBrewer", "RDML", "shiny", "stringr", "whisker"] + "depends": ["RColorBrewer", "RDML", "checkmate", "dplyr", "plotly", "purrr", "shiny", "stringr", "whisker"] }, "shinyMonacoEditor": { "name": "shinyMonacoEditor", @@ -109319,13 +110459,13 @@ "name": "shinyNORRRM", "version": "0.8.6", "sha256": "1cb6n3bwqfygqc0p25z62nmrrns6hm2by4chi45sl898is5hkhdn", - "depends": ["pracma", "shiny", "shinythemes", "shinyWidgets", "Ternary"] + "depends": ["Ternary", "pracma", "shiny", "shinyWidgets", "shinythemes"] }, "shinyNotes": { "name": "shinyNotes", "version": "0.0.2", "sha256": "19k4n3ikffxs24c66i9wi7ldw50wjs0gym73n9clnq3hh6l2fzz8", - "depends": ["DBI", "dbplyr", "dplyr", "magrittr", "markdown", "rlang", "RSQLite", "shiny", "shinyjs", "shinyWidgets", "stringr"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "magrittr", "markdown", "rlang", "shiny", "shinyWidgets", "shinyjs", "stringr"] }, "shinyPredict": { "name": "shinyPredict", @@ -109361,7 +110501,7 @@ "name": "shinySbm", "version": "0.1.5", "sha256": "0r6zq235krg4rikpypwp9a2hwblgygl7mmc1phxrpxr8xppgq2da", - "depends": ["colourpicker", "config", "data_table", "dplyr", "DT", "flextable", "fresh", "ggplot2", "golem", "magrittr", "patchwork", "purrr", "rmarkdown", "sbm", "shiny", "shinyalert", "shinydashboard", "stringr", "visNetwork"] + "depends": ["DT", "colourpicker", "config", "data_table", "dplyr", "flextable", "fresh", "ggplot2", "golem", "magrittr", "patchwork", "purrr", "rmarkdown", "sbm", "shiny", "shinyalert", "shinydashboard", "stringr", "visNetwork"] }, "shinySearchbar": { "name": "shinySearchbar", @@ -109383,15 +110523,15 @@ }, "shinyStorePlus": { "name": "shinyStorePlus", - "version": "1.1", - "sha256": "1y4yqladglkyz3br7g0prd9dniqd0pdj775dic0nlgg27gdl8ca8", + "version": "1.2", + "sha256": "08xyd26wcfv629a4791s20f690faf472rn33qhnlsjbddnmla62z", "depends": ["htmltools", "jsonlite", "shiny", "shinyWidgets"] }, "shinyTempSignal": { "name": "shinyTempSignal", "version": "0.0.8", "sha256": "1ww164zqqc9rh158wfi6c4jcp4pn61mz56zbhh2fkmyc2mcv6xbb", - "depends": ["ape", "forecast", "ggplot2", "ggpmisc", "ggprism", "ggtree", "golem", "nlme", "shiny", "shinydashboard", "shinyjs", "shinyWidgets", "treeio", "yulab_utils"] + "depends": ["ape", "forecast", "ggplot2", "ggpmisc", "ggprism", "ggtree", "golem", "nlme", "shiny", "shinyWidgets", "shinydashboard", "shinyjs", "treeio", "yulab_utils"] }, "shinyTime": { "name": "shinyTime", @@ -109467,9 +110607,9 @@ }, "shinycssloaders": { "name": "shinycssloaders", - "version": "1.0.0", - "sha256": "0r3xm273lhdhzbs2mkgw1m2kwb7z1dh1pzya8yxy5vacda1l2ikl", - "depends": ["digest", "glue", "shiny"] + "version": "1.1.0", + "sha256": "0w7gw81j5d2dvjdk49dd222bqd40ll3sl8mykg68vcz64ihdg2h3", + "depends": ["digest", "glue", "htmltools", "shiny"] }, "shinycustomloader": { "name": "shinycustomloader", @@ -109485,15 +110625,15 @@ }, "shinydashboardPlus": { "name": "shinydashboardPlus", - "version": "2.0.4", - "sha256": "11ckx8il1v4jk26ss0bylk73xb5bh3xd2d5421i5s8wlxlwd0z5q", + "version": "2.0.5", + "sha256": "1k53ycfdv5r58rwqsk7mkrrlz72wikhrhzlfrg3dkwbdbzblrhqb", "depends": ["fresh", "htmltools", "lifecycle", "shiny", "shinydashboard", "waiter"] }, "shinydbauth": { "name": "shinydbauth", "version": "1.0.0.1", "sha256": "04f8cq5vismbl05cvkd4kh5h1bzank5fhsgfmxdqwpy3jp68a1kf", - "depends": ["billboarder", "DT", "glue", "htmltools", "openssl", "R_utils", "R6", "scrypt", "shiny", "yaml"] + "depends": ["DT", "R6", "R_utils", "billboarder", "glue", "htmltools", "openssl", "scrypt", "shiny", "yaml"] }, "shinydisconnect": { "name": "shinydisconnect", @@ -109511,7 +110651,7 @@ "name": "shinydrive", "version": "0.1.3", "sha256": "16yfc9grmjzkpl6xzqn5rpkqd2qnlj4qdgia8img794l6j0y8dgp", - "depends": ["DT", "htmltools", "knitr", "R_utils", "shiny", "yaml"] + "depends": ["DT", "R_utils", "htmltools", "knitr", "shiny", "yaml"] }, "shinyfilter": { "name": "shinyfilter", @@ -109563,15 +110703,15 @@ }, "shinylive": { "name": "shinylive", - "version": "0.1.1", - "sha256": "1hsvcsbzrzv0gb99mfc02sd77mlwcxjqzzr5v2jfr5ajq33q3ffb", - "depends": ["archive", "brio", "fs", "httr2", "jsonlite", "progress", "rappdirs", "rlang"] + "version": "0.2.0", + "sha256": "16r3fbzgv9qjdr08cdazddjxanliymi2mhlx56p0bdrn10miiyp9", + "depends": ["archive", "brio", "cli", "fs", "gh", "glue", "httr2", "jsonlite", "pkgdepends", "progress", "rappdirs", "renv", "rlang", "whisker", "withr"] }, "shinyloadtest": { "name": "shinyloadtest", - "version": "1.1.0", - "sha256": "0684p9anbc3qdn4rqkxp33nm0d04zb264b3blwa23pa5akis2klq", - "depends": ["curl", "dplyr", "ggplot2", "httpuv", "jsonlite", "magrittr", "R6", "rlang", "scales", "stringr", "svglite", "vroom", "websocket", "xml2"] + "version": "1.2.0", + "sha256": "01y75imwjbg1wdw7xx50a48py23ya0hgl4jm24lgfl60llm2lfrz", + "depends": ["R6", "cli", "curl", "dplyr", "ggplot2", "httpuv", "jsonlite", "magrittr", "rlang", "scales", "stringr", "svglite", "vroom", "websocket", "xml2"] }, "shinylogs": { "name": "shinylogs", @@ -109583,7 +110723,7 @@ "name": "shinymanager", "version": "1.0.410", "sha256": "0nl672dgwj34wm4i3pxk28lv6qw9xsgg3hm0h78q3zdgk8a33kdn", - "depends": ["billboarder", "DBI", "DT", "htmltools", "openssl", "R_utils", "R6", "RSQLite", "scrypt", "shiny"] + "depends": ["DBI", "DT", "R6", "RSQLite", "R_utils", "billboarder", "htmltools", "openssl", "scrypt", "shiny"] }, "shinymaterial": { "name": "shinymaterial", @@ -109601,13 +110741,13 @@ "name": "shinymgr", "version": "1.1.0", "sha256": "000r7vh8myc10jxna5h65kjx1sqw45aqjj24brls5vnvz5rg4i3w", - "depends": ["DBI", "reactable", "renv", "RSQLite", "shiny", "shinydashboard", "shinyjs"] + "depends": ["DBI", "RSQLite", "reactable", "renv", "shiny", "shinydashboard", "shinyjs"] }, "shinymodels": { "name": "shinymodels", "version": "0.1.1", "sha256": "1ydj4ny94y77akbsq0asaz29s3hnkb237icbxsnrh18z2wnyhhll", - "depends": ["dplyr", "DT", "generics", "ggplot2", "glue", "htmltools", "magrittr", "parsnip", "plotly", "purrr", "rlang", "scales", "shiny", "shinydashboard", "tidyr", "tidyselect", "tune", "yardstick"] + "depends": ["DT", "dplyr", "generics", "ggplot2", "glue", "htmltools", "magrittr", "parsnip", "plotly", "purrr", "rlang", "scales", "shiny", "shinydashboard", "tidyr", "tidyselect", "tune", "yardstick"] }, "shinyobjects": { "name": "shinyobjects", @@ -109643,13 +110783,13 @@ "name": "shinyrecipes", "version": "0.1.0", "sha256": "1b4l27qsl1lpssh3jv1pqmw2mq8hanfj0m269yp5618nd5nxd2ck", - "depends": ["dplyr", "DT", "esquisse", "miniUI", "purrr", "recipes", "rstudioapi", "shiny", "shinyglide", "shinyWidgets", "sortable", "stringr", "tidyr"] + "depends": ["DT", "dplyr", "esquisse", "miniUI", "purrr", "recipes", "rstudioapi", "shiny", "shinyWidgets", "shinyglide", "sortable", "stringr", "tidyr"] }, "shinyreforms": { "name": "shinyreforms", "version": "0.0.1", "sha256": "1g1blc57c6zkca0m52bqkw8jwgpplabns07x1cwkk46dmv6sgqci", - "depends": ["htmltools", "R6", "shiny"] + "depends": ["R6", "htmltools", "shiny"] }, "shinyscreenshot": { "name": "shinyscreenshot", @@ -109667,7 +110807,7 @@ "name": "shinystan", "version": "2.6.0", "sha256": "0afm703zriyqprz1zvypir80lq2ylfff3qvj5i7p9n365mm8b150", - "depends": ["bayesplot", "colourpicker", "DT", "dygraphs", "ggplot2", "gridExtra", "gtools", "markdown", "reshape2", "rstan", "shiny", "shinyjs", "shinythemes", "threejs", "xtable", "xts"] + "depends": ["DT", "bayesplot", "colourpicker", "dygraphs", "ggplot2", "gridExtra", "gtools", "markdown", "reshape2", "rstan", "shiny", "shinyjs", "shinythemes", "threejs", "xtable", "xts"] }, "shinysurveys": { "name": "shinysurveys", @@ -109679,13 +110819,13 @@ "name": "shinytest", "version": "1.6.1", "sha256": "0h9ciivic0fg7w5yq9cycdj1fh4zhdg4fz1gkn2fdx87c0d5j7a4", - "depends": ["assertthat", "callr", "crayon", "debugme", "digest", "htmlwidgets", "httpuv", "httr", "jsonlite", "parsedate", "pingr", "R6", "rematch", "rlang", "rstudioapi", "shiny", "testthat", "webdriver", "withr"] + "depends": ["R6", "assertthat", "callr", "crayon", "debugme", "digest", "htmlwidgets", "httpuv", "httr", "jsonlite", "parsedate", "pingr", "rematch", "rlang", "rstudioapi", "shiny", "testthat", "webdriver", "withr"] }, "shinytest2": { "name": "shinytest2", "version": "0.3.2", "sha256": "1qrnh9cfgi67szv1yiaqkv10vf1r70i9l88h6dssgiv1q2fw8yx1", - "depends": ["callr", "checkmate", "chromote", "cpp11", "crayon", "fs", "globals", "httr", "jsonlite", "pingr", "R6", "rlang", "rmarkdown", "shiny", "testthat", "withr"] + "depends": ["R6", "callr", "checkmate", "chromote", "cpp11", "crayon", "fs", "globals", "httr", "jsonlite", "pingr", "rlang", "rmarkdown", "shiny", "testthat", "withr"] }, "shinythemes": { "name": "shinythemes", @@ -109721,7 +110861,7 @@ "name": "shock", "version": "1.0", "sha256": "11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp", - "depends": ["capushe", "GGMselect", "glasso", "igraph", "mvtnorm"] + "depends": ["GGMselect", "capushe", "glasso", "igraph", "mvtnorm"] }, "shopifyadsR": { "name": "shopifyadsR", @@ -109733,7 +110873,7 @@ "name": "shopifyr", "version": "1.0.0", "sha256": "05hih1v5vvr7vmwarizsdx8517g74s96fdsz3klcz3g12idx1nqn", - "depends": ["curl", "jsonlite", "R6"] + "depends": ["R6", "curl", "jsonlite"] }, "shoredate": { "name": "shoredate", @@ -109745,7 +110885,7 @@ "name": "shortIRT", "version": "0.1.3", "sha256": "1z2db31r332dayaprdjrm9r3yihj7jnpk7j106m74q5ckwsaw859", - "depends": ["dplyr", "ggplot2", "TAM"] + "depends": ["TAM", "dplyr", "ggplot2"] }, "shortcuts": { "name": "shortcuts", @@ -109757,13 +110897,13 @@ "name": "shorts", "version": "3.2.0", "sha256": "1ajqvm6y5djdjh5prci31hyv1ilycn1vf5gniq92gxqhzab7bnxc", - "depends": ["ggplot2", "LambertW", "minpack_lm", "purrr", "tidyr"] + "depends": ["LambertW", "ggplot2", "minpack_lm", "purrr", "tidyr"] }, "shotGroups": { "name": "shotGroups", "version": "0.8.2", "sha256": "0m3n3ja6ny45rdd13s9f7nm1ml3p3y7nisbhfg0fj369wym95r1p", - "depends": ["boot", "coin", "CompQuadForm", "KernSmooth", "robustbase"] + "depends": ["CompQuadForm", "KernSmooth", "boot", "coin", "robustbase"] }, "showimage": { "name": "showimage", @@ -109799,13 +110939,13 @@ "name": "shrinkDSM", "version": "0.2.0", "sha256": "0vl3cl9njl0irz9hsli7xkf49jawkywww91j5gxlmz5vdrxnwz9c", - "depends": ["coda", "Rcpp", "RcppArmadillo", "RcppProgress", "shrinkTVP", "stochvol"] + "depends": ["Rcpp", "RcppArmadillo", "RcppProgress", "coda", "shrinkTVP", "stochvol"] }, "shrinkTVP": { "name": "shrinkTVP", "version": "3.0.1", "sha256": "0fcvx7pz4mn89g9g8x32wgqil9xyh29vjxx8hlvv5385ig2wd4lw", - "depends": ["coda", "GIGrvg", "Rcpp", "RcppArmadillo", "RcppGSL", "RcppProgress", "stochvol", "zoo"] + "depends": ["GIGrvg", "Rcpp", "RcppArmadillo", "RcppGSL", "RcppProgress", "coda", "stochvol", "zoo"] }, "shroomDK": { "name": "shroomDK", @@ -109865,7 +111005,7 @@ "name": "sievePH", "version": "1.1", "sha256": "0bzf7k3qk8ih9qvkr196wcy8b6wq5q6x6cn311z312713n9jly10", - "depends": ["ggplot2", "ggpubr", "np", "plyr", "Rcpp", "RcppArmadillo", "scales", "survival"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "ggpubr", "np", "plyr", "scales", "survival"] }, "sievetest": { "name": "sievetest", @@ -109893,9 +111033,9 @@ }, "sigQC": { "name": "sigQC", - "version": "0.1.23", - "sha256": "0fpci6l0h6047qq7igwmm38rma768l706xfmfdfn1qqgkm5sv0x8", - "depends": ["biclust", "circlize", "class", "cluster", "ComplexHeatmap", "fmsb", "gplots", "gridGraphics", "GSVA", "KernSmooth", "lattice", "MASS", "mclust", "moments", "nnet"] + "version": "0.1.24", + "sha256": "0z728hsicnx6j95y9q4gs9drv568bjqxckvgp08g3ahk5iymcym2", + "depends": ["ComplexHeatmap", "GSVA", "KernSmooth", "MASS", "biclust", "circlize", "class", "cluster", "fmsb", "gplots", "gridGraphics", "lattice", "mclust", "moments", "nnet"] }, "sigclust": { "name": "sigclust", @@ -109913,7 +111053,7 @@ "name": "sigminer", "version": "2.3.1", "sha256": "0fwmq6p6qyz5pq1vhh26ddrivcqaqnfv1bsnhzfplz1glmv6r0xj", - "depends": ["cli", "cowplot", "data_table", "dplyr", "furrr", "future", "ggplot2", "ggpubr", "maftools", "magrittr", "NMF", "purrr", "Rcpp", "rlang", "tidyr"] + "depends": ["NMF", "Rcpp", "cli", "cowplot", "data_table", "dplyr", "furrr", "future", "ggplot2", "ggpubr", "maftools", "magrittr", "purrr", "rlang", "tidyr"] }, "sigmoid": { "name": "sigmoid", @@ -109923,8 +111063,8 @@ }, "signal": { "name": "signal", - "version": "1.8-0", - "sha256": "1126p631zm0wc4h9ghqai5yb9vklpz676fygb0d0aavs2raaijw9", + "version": "1.8-1", + "sha256": "1c7fw5akdm8f44zgdafsgz2fpn6kfwifaw29yakl7zykq89vq8m3", "depends": ["MASS"] }, "signalHsmm": { @@ -109955,7 +111095,7 @@ "name": "signnet", "version": "1.0.4", "sha256": "04w8wik8q15hi7yc9rp30bc31pvw15bkrvr3lnif46zrrhsq6cv8", - "depends": ["igraph", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "igraph"] }, "signs": { "name": "signs", @@ -110003,13 +111143,13 @@ "name": "sim1000G", "version": "1.40", "sha256": "1avq6xfc34izavvp9vb5ccc2b9nc4m7cwr06ygnsmpgwi5nswbb8", - "depends": ["hapsim", "MASS", "readr", "stringr"] + "depends": ["MASS", "hapsim", "readr", "stringr"] }, "sim2Dpredictr": { "name": "sim2Dpredictr", "version": "0.1.1", "sha256": "14v35ngwj27j2r4mszwjz1dnk4iydakk5qf4z0swwi931q1jiphc", - "depends": ["dplyr", "MASS", "matrixcalc", "Rdpack", "spam", "tibble"] + "depends": ["MASS", "Rdpack", "dplyr", "matrixcalc", "spam", "tibble"] }, "simCAT": { "name": "simCAT", @@ -110021,7 +111161,7 @@ "name": "simDAG", "version": "0.1.2", "sha256": "18zbqpvndblrqmdz7hsbc0kf1w8v6a75z4x9yr95f3saazirrj6p", - "depends": ["data_table", "igraph", "Rfast", "rlang"] + "depends": ["Rfast", "data_table", "igraph", "rlang"] }, "simDNAmixtures": { "name": "simDNAmixtures", @@ -110051,7 +111191,7 @@ "name": "simFrame", "version": "0.5.4", "sha256": "1a2p4hx80rrrzs4gjscdsy1jbzpahkw0h2nlna4q8p75blgnzwpn", - "depends": ["lattice", "Rcpp"] + "depends": ["Rcpp", "lattice"] }, "simIDM": { "name": "simIDM", @@ -110063,7 +111203,7 @@ "name": "simIReff", "version": "1.0", "sha256": "0yi43splda8chnh4bq5x6chbrl5c0y9sv1k2m31763da0czayall", - "depends": ["bde", "extraDistr", "ks", "MASS", "np", "rvinecopulib", "truncnorm"] + "depends": ["MASS", "bde", "extraDistr", "ks", "np", "rvinecopulib", "truncnorm"] }, "simITS": { "name": "simITS", @@ -110075,7 +111215,7 @@ "name": "simMP", "version": "0.17.3", "sha256": "1pzg79dd08ds3pfzxnk9h95gaibicv00mnm0jb4i8v5is4gzrdhr", - "depends": ["Biostrings", "BSgenome", "doParallel", "foreach", "GenomeInfoDb", "GenomicRanges", "IRanges", "XVector"] + "depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "XVector", "doParallel", "foreach"] }, "simMSM": { "name": "simMSM", @@ -110093,13 +111233,13 @@ "name": "simPH", "version": "1.3.13", "sha256": "086060f78f1dmpa6cyhx160blchckplw04gs6997f1hwzswci2l2", - "depends": ["data_table", "dplyr", "ggplot2", "gridExtra", "lazyeval", "MASS", "mgcv", "quadprog", "stringr", "survival"] + "depends": ["MASS", "data_table", "dplyr", "ggplot2", "gridExtra", "lazyeval", "mgcv", "quadprog", "stringr", "survival"] }, "simPop": { "name": "simPop", "version": "2.1.3", "sha256": "0rgaalkaxxh92yryzd39qnpahzi7d2bqnnsgx4i5rai2vrj1hqfi", - "depends": ["colorspace", "data_table", "doParallel", "e1071", "EnvStats", "fitdistrplus", "foreach", "lattice", "MASS", "matrixStats", "nnet", "partykit", "ranger", "Rcpp", "RcppArmadillo", "vcd", "VIM", "wrswoR", "xgboost"] + "depends": ["EnvStats", "MASS", "Rcpp", "RcppArmadillo", "VIM", "colorspace", "data_table", "doParallel", "e1071", "fitdistrplus", "foreach", "lattice", "matrixStats", "nnet", "partykit", "ranger", "vcd", "wrswoR", "xgboost"] }, "simRestore": { "name": "simRestore", @@ -110109,8 +111249,8 @@ }, "simStateSpace": { "name": "simStateSpace", - "version": "1.2.1", - "sha256": "1151r60vrb3b9crjb77a4aba6mzv13wq5awd0hrh8684h6pz9f76", + "version": "1.2.2", + "sha256": "072dyrzxpmp6i565162bpriviy47d59f3ssvkhpdpvs1d0g11j2a", "depends": ["Rcpp", "RcppArmadillo"] }, "simTargetCov": { @@ -110129,7 +111269,7 @@ "name": "simaerep", "version": "0.5.0", "sha256": "1r0hgf8i7grpiww42l28az4pr81s998ghyrmbrva8ap27vj3r269", - "depends": ["cowplot", "dplyr", "forcats", "furrr", "ggplot2", "knitr", "magrittr", "progressr", "purrr", "RColorBrewer", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["RColorBrewer", "cowplot", "dplyr", "forcats", "furrr", "ggplot2", "knitr", "magrittr", "progressr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "simboot": { "name": "simboot", @@ -110141,7 +111281,7 @@ "name": "simcausal", "version": "0.5.6", "sha256": "0r87i5m8sd9bf8ddlkgq9dl0pglhxl9pj5b0vx79va9r5wb55vgk", - "depends": ["assertthat", "data_table", "igraph", "Matrix", "R6", "stringr"] + "depends": ["Matrix", "R6", "assertthat", "data_table", "igraph", "stringr"] }, "simcdm": { "name": "simcdm", @@ -110161,6 +111301,12 @@ "sha256": "0igwn82zfx6ajv42gpyx6969aldygldkpdc9ik6601511sscvf2a", "depends": [] }, + "simdata": { + "name": "simdata", + "version": "0.4.0", + "sha256": "1yzxa2xfjclhwbzvzdivgd99h8n9cvb16ws074r5gw2xvd0ilf3m", + "depends": ["Matrix", "igraph", "mvtnorm"] + }, "simdd": { "name": "simdd", "version": "1.1-2", @@ -110183,7 +111329,7 @@ "name": "simer", "version": "0.9.0.4", "sha256": "1mgkmfv1mm4paxvzq43rdxjxf13csxizl8v1gc47y7h21hq2f5sx", - "depends": ["BH", "bigmemory", "igraph", "jsonlite", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress"] + "depends": ["BH", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "bigmemory", "igraph", "jsonlite"] }, "simest": { "name": "simest", @@ -110213,7 +111359,7 @@ "name": "simfinapi", "version": "1.0.0", "sha256": "1i9zf17nn9xbyccmr8blrlybqakrlzrxxm961bgrsb2pzawn6f6j", - "depends": ["checkmate", "data_table", "httr2", "lifecycle", "memoise", "RcppSimdJson"] + "depends": ["RcppSimdJson", "checkmate", "data_table", "httr2", "lifecycle", "memoise"] }, "simfit": { "name": "simfit", @@ -110237,7 +111383,7 @@ "name": "simhelpers", "version": "0.2.1", "sha256": "0awj430nmwgh2v19zy9sfkq06kjnbr7hp9mrnz4ziwlzm7bzv9wk", - "depends": ["furrr", "Rdpack", "rstudioapi", "tibble", "tidyr"] + "depends": ["Rdpack", "furrr", "rstudioapi", "tibble", "tidyr"] }, "simitation": { "name": "simitation", @@ -110249,13 +111395,13 @@ "name": "simlandr", "version": "0.3.1", "sha256": "1bgpka5z23763d8vlxz1pymgypqj0wyab3kcf6rkhliliksqqqp0", - "depends": ["bigmemory", "digest", "dplyr", "forcats", "gganimate", "ggplot2", "htmlwidgets", "ks", "lifecycle", "magrittr", "MASS", "plotly", "progress", "purrr", "rlang", "tibble"] + "depends": ["MASS", "bigmemory", "digest", "dplyr", "forcats", "gganimate", "ggplot2", "htmlwidgets", "ks", "lifecycle", "magrittr", "plotly", "progress", "purrr", "rlang", "tibble"] }, "simmer": { "name": "simmer", - "version": "4.4.6.3", - "sha256": "03fns5z7qvmx42cj5q9k5mc3klbb3wi23qzwym6rjcik6zrlyasx", - "depends": ["codetools", "magrittr", "Rcpp"] + "version": "4.4.6.4", + "sha256": "110wjmhr4645nrrjx4vk8inpz543qkrz8zg4avv4i05zrad2393x", + "depends": ["Rcpp", "codetools", "magrittr"] }, "simmer_bricks": { "name": "simmer.bricks", @@ -110279,7 +111425,7 @@ "name": "simmr", "version": "0.5.1.216", "sha256": "0rvf6b0x6iivgp1czj98972p8gr1g96sc3g55p30gnw08b48i1x5", - "depends": ["bayesplot", "boot", "checkmate", "compositions", "GGally", "ggplot2", "R2jags", "Rcpp", "RcppArmadillo", "RcppDist", "reshape2", "viridis"] + "depends": ["GGally", "R2jags", "Rcpp", "RcppArmadillo", "RcppDist", "bayesplot", "boot", "checkmate", "compositions", "ggplot2", "reshape2", "viridis"] }, "simode": { "name": "simode", @@ -110289,8 +111435,8 @@ }, "simodels": { "name": "simodels", - "version": "0.0.5", - "sha256": "149490vgw0549x5zym28kyxgyjhjl2wx7rcak9gabkznwjjrhqk5", + "version": "0.1.0", + "sha256": "0fhrlmyh0hnv518131wabadidim5k6f2gjsq5k4jc9zwmm5qbgfz", "depends": ["dplyr", "geodist", "od", "rlang", "sf"] }, "simphony": { @@ -110345,7 +111491,7 @@ "name": "simplePHENOTYPES", "version": "1.3.0", "sha256": "0f5mzlx6vcvq6cvyz4v9yr1k2acgnxizg8clsxdm6hpi4maizrpk", - "depends": ["data_table", "gdsfmt", "mvtnorm", "SNPRelate"] + "depends": ["SNPRelate", "data_table", "gdsfmt", "mvtnorm"] }, "simpleRCache": { "name": "simpleRCache", @@ -110361,8 +111507,8 @@ }, "simpleboot": { "name": "simpleboot", - "version": "1.1-7", - "sha256": "0769dmrk8rw5v9598p7xlpawybwsdxnrqkxhavqpzy1vwg885575", + "version": "1.1-8", + "sha256": "18pqsjkpl7szwfinc842q6s6vjlsr0gkkqr1l6174ibryqvlf2fx", "depends": ["boot"] }, "simplecolors": { @@ -110381,7 +111527,7 @@ "name": "simplegraphdb", "version": "2021.03.10", "sha256": "0573hrv23nimmf3d8dgdynii79h84a3mfr4xxk3cggxhsxpfmb2i", - "depends": ["DBI", "rjson", "RSQLite"] + "depends": ["DBI", "RSQLite", "rjson"] }, "simplermarkdown": { "name": "simplermarkdown", @@ -110389,6 +111535,12 @@ "sha256": "0lffwsrhsdqcqhklh24v0y0x6w4vq9jch93m330kfdv2amab1l06", "depends": ["rjson"] }, + "simpletex": { + "name": "simpletex", + "version": "1.0.4", + "sha256": "13hcb3k5car0q5yqb9wqccdzgrqxvjbbzn8c9rcrx23wgwpr226l", + "depends": ["digest", "glue", "httr", "jsonlite"] + }, "simplexreg": { "name": "simplexreg", "version": "1.3", @@ -110399,13 +111551,13 @@ "name": "simplextree", "version": "1.0.1", "sha256": "18jvzcz4fdsi17j7qdqpjvx6zygvlcvpziikb8qxskaib5180l08", - "depends": ["magrittr", "Rcpp"] + "depends": ["Rcpp", "magrittr"] }, "simplifyNet": { "name": "simplifyNet", "version": "0.0.1", "sha256": "04iv1alkd85lwwyf8k6iwsj9fbxl6smsjm2b34z91za70n0rsw5q", - "depends": ["dplyr", "igraph", "Matrix", "sanic"] + "depends": ["Matrix", "dplyr", "igraph", "sanic"] }, "simpr": { "name": "simpr", @@ -110417,13 +111569,13 @@ "name": "simputation", "version": "0.2.8", "sha256": "02l7j2s74mjd4vgly4nnf2w7as9m3m6qifa292r29iaw12l0zj81", - "depends": ["glmnet", "gower", "MASS", "missForest", "norm", "randomForest", "rpart", "VIM"] + "depends": ["MASS", "VIM", "glmnet", "gower", "missForest", "norm", "randomForest", "rpart"] }, "simr": { "name": "simr", "version": "1.0.7", "sha256": "1rfnhyqvdazvar7r1ml71lskh1hdk3yfzv5jlcz18wzffscgkgmb", - "depends": ["binom", "car", "iterators", "lme4", "lmerTest", "pbkrtest", "plotrix", "plyr", "RLRsim", "stringr"] + "depends": ["RLRsim", "binom", "car", "iterators", "lme4", "lmerTest", "pbkrtest", "plotrix", "plyr", "stringr"] }, "simrec": { "name": "simrec", @@ -110469,9 +111621,9 @@ }, "simstudy": { "name": "simstudy", - "version": "0.8.0", - "sha256": "1xdqk5jikhvxxd78frfj3s3m7aigkhkavzryifhzv47l22rmpkcb", - "depends": ["backports", "data_table", "fastglm", "glue", "mvnfast", "pbv", "Rcpp"] + "version": "0.8.1", + "sha256": "1qj0f5c40z1dhxm6wfrl83nd4h1s90qy7aa1ka3ziz8bpkpxkcnw", + "depends": ["Rcpp", "backports", "data_table", "fastglm", "glue", "mvnfast", "pbv"] }, "simsurv": { "name": "simsurv", @@ -110495,13 +111647,13 @@ "name": "simtrial", "version": "0.4.1", "sha256": "1gsd7ykqws7y5ggblbjjrg3yid9fj7samrnbk7fb4dnknvv8lgls", - "depends": ["data_table", "doFuture", "foreach", "future", "mvtnorm", "Rcpp", "rlang", "survival"] + "depends": ["Rcpp", "data_table", "doFuture", "foreach", "future", "mvtnorm", "rlang", "survival"] }, "simts": { "name": "simts", "version": "0.2.2", "sha256": "12v6djqij8w0vy25pndri4kng7zq7bncvbg9h28vg1m8sk3nlfc4", - "depends": ["broom", "dplyr", "magrittr", "purrr", "Rcpp", "RcppArmadillo", "robcor", "scales", "tidyr"] + "depends": ["Rcpp", "RcppArmadillo", "broom", "dplyr", "magrittr", "purrr", "robcor", "scales", "tidyr"] }, "simuclustfactor": { "name": "simuclustfactor", @@ -110513,7 +111665,7 @@ "name": "simukde", "version": "1.3.0", "sha256": "0mpj8pfrlagc97v53idsiypjcpbaj07y6klanph5lkiwzsgbz8sv", - "depends": ["ks", "MASS", "mvtnorm"] + "depends": ["MASS", "ks", "mvtnorm"] }, "simulMGF": { "name": "simulMGF", @@ -110567,7 +111719,7 @@ "name": "singR", "version": "0.1.2", "sha256": "1xfmgavcm63imc5a57vk9x3yvdsf2y9599ipmimivdi6q0cxv7bc", - "depends": ["clue", "gam", "ICtest", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["ICtest", "MASS", "Rcpp", "RcppArmadillo", "clue", "gam"] }, "singcar": { "name": "singcar", @@ -110579,12 +111731,12 @@ "name": "singleCellHaystack", "version": "1.0.2", "sha256": "1kfkbfabv9j87rsy3nb3dmk6ckncvimrwax1p74vnszbz91a1zg7", - "depends": ["ggplot2", "Matrix", "reshape2"] + "depends": ["Matrix", "ggplot2", "reshape2"] }, "singleRcapture": { "name": "singleRcapture", - "version": "0.2.1.1", - "sha256": "184kvkjjhm3ak58yg0sdzkjnw0jzsm22pxlx3nq5a4jv6ckaxrix", + "version": "0.2.1.2", + "sha256": "18h10ms9xh97c4s9sa33bcvv341img73b9vh4ppgyk1lpissa1mb", "depends": ["doParallel", "foreach", "lamW", "mathjaxr", "sandwich"] }, "sinib": { @@ -110621,13 +111773,13 @@ "name": "sirt", "version": "4.1-15", "sha256": "0rihmkpnd6hdvb2qga387nw9hxz5ydhjbh9lgaf58nza7fwgqby1", - "depends": ["CDM", "pbapply", "pbv", "Rcpp", "RcppArmadillo", "TAM"] + "depends": ["CDM", "Rcpp", "RcppArmadillo", "TAM", "pbapply", "pbv"] }, "sirus": { "name": "sirus", "version": "0.3.3", "sha256": "0whjshqwy3dhim22rj358811s3h872d861j93zlhh32ivvwj2434", - "depends": ["ggplot2", "glmnet", "Matrix", "Rcpp", "RcppEigen", "ROCR"] + "depends": ["Matrix", "ROCR", "Rcpp", "RcppEigen", "ggplot2", "glmnet"] }, "sisVIVE": { "name": "sisVIVE", @@ -110639,7 +111791,7 @@ "name": "sisal", "version": "0.48", "sha256": "1fh35ndra58dryw222ng7ys3gx1izyk5789k30lyd4n8wqy6sjjd", - "depends": ["boot", "digest", "lattice", "mgcv", "R_matlab", "R_methodsS3"] + "depends": ["R_matlab", "R_methodsS3", "boot", "digest", "lattice", "mgcv"] }, "sisireg": { "name": "sisireg", @@ -110675,7 +111827,7 @@ "name": "sitepickR", "version": "0.0.1", "sha256": "1cqvf4d2jpav53v7h7vzknm8cbr5kqk1djqkhmjrwv2zjnx3fg97", - "depends": ["data_table", "dplyr", "ggplot2", "magrittr", "MatchIt", "reshape2", "sampling", "scales", "stringr", "tidyr", "tidyselect"] + "depends": ["MatchIt", "data_table", "dplyr", "ggplot2", "magrittr", "reshape2", "sampling", "scales", "stringr", "tidyr", "tidyselect"] }, "siteymlgen": { "name": "siteymlgen", @@ -110711,7 +111863,7 @@ "name": "sits", "version": "1.5.0", "sha256": "0ym6dkw1nvijvhyskiwp9m4pys9gmsxqhjwmqs6n670mxfnqibss", - "depends": ["dplyr", "gdalUtilities", "lubridate", "purrr", "Rcpp", "RcppArmadillo", "rstac", "sf", "showtext", "slider", "sysfonts", "terra", "tibble", "tidyr", "torch", "yaml"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "gdalUtilities", "lubridate", "purrr", "rstac", "sf", "showtext", "slider", "sysfonts", "terra", "tibble", "tidyr", "torch", "yaml"] }, "sivs": { "name": "sivs", @@ -110723,19 +111875,19 @@ "name": "sizeMat", "version": "1.1.2", "sha256": "1vbndadsn80ddrg471vp1qxf0gan38w6dkjk1p2npvfb47wdjj2h", - "depends": ["MASS", "matrixStats", "MCMCpack"] + "depends": ["MASS", "MCMCpack", "matrixStats"] }, "sjPlot": { "name": "sjPlot", "version": "2.8.16", "sha256": "093nmn1gq8i4kr5nhwby883rxpdiyb959shqvfnvplwcnnv762ji", - "depends": ["bayestestR", "datawizard", "dplyr", "ggeffects", "ggplot2", "insight", "knitr", "MASS", "parameters", "performance", "purrr", "rlang", "scales", "sjlabelled", "sjmisc", "sjstats", "tidyr"] + "depends": ["MASS", "bayestestR", "datawizard", "dplyr", "ggeffects", "ggplot2", "insight", "knitr", "parameters", "performance", "purrr", "rlang", "scales", "sjlabelled", "sjmisc", "sjstats", "tidyr"] }, "sjSDM": { "name": "sjSDM", "version": "1.0.5", "sha256": "1qrslxrminbzvqkcngx875kkbaj9f2wd8svdwsd0706v5w72pisg", - "depends": ["abind", "checkmate", "cli", "crayon", "ggplot2", "ggtern", "mathjaxr", "Metrics", "mgcv", "mvtnorm", "reticulate", "rstudioapi"] + "depends": ["Metrics", "abind", "checkmate", "cli", "crayon", "ggplot2", "ggtern", "mathjaxr", "mgcv", "mvtnorm", "reticulate", "rstudioapi"] }, "sjdbc": { "name": "sjdbc", @@ -110777,7 +111929,7 @@ "name": "skedastic", "version": "2.0.2", "sha256": "1ln0scwgvpif610jgwdl0rzlx41i8w2ri1vaq0kl11vg69xp5105", - "depends": ["bazar", "broom", "caret", "CompQuadForm", "inflection", "MASS", "Matrix", "mgcv", "osqp", "pracma", "quadprog", "quadprogXT", "Rdpack", "Rfast", "ROI", "ROI_plugin_qpoases", "slam"] + "depends": ["CompQuadForm", "MASS", "Matrix", "ROI", "ROI_plugin_qpoases", "Rdpack", "Rfast", "bazar", "broom", "caret", "inflection", "mgcv", "osqp", "pracma", "quadprog", "quadprogXT", "slam"] }, "skeletor": { "name": "skeletor", @@ -110795,7 +111947,7 @@ "name": "sketch", "version": "1.1.20.3", "sha256": "03ssz4vwrcfcqs5lvnrkm7yqc8ir62kz3zp8aycgl88rw5qm9003", - "depends": ["base64enc", "glue", "htmltools", "jsonlite", "magrittr", "purrr", "rlang", "rstudioapi", "shiny", "V8"] + "depends": ["V8", "base64enc", "glue", "htmltools", "jsonlite", "magrittr", "purrr", "rlang", "rstudioapi", "shiny"] }, "sketcher": { "name": "sketcher", @@ -110807,7 +111959,7 @@ "name": "sketching", "version": "0.1.2", "sha256": "0k2rdiawj84zhfik3qzqqzabm9sdjwnr008p0fhaaqpifbr0q5xj", - "depends": ["MASS", "phangorn", "Rcpp"] + "depends": ["MASS", "Rcpp", "phangorn"] }, "sketchy": { "name": "sketchy", @@ -110819,13 +111971,13 @@ "name": "skewMLRM", "version": "1.6", "sha256": "16gr0haag0pqw7k7nvfqlc6s5i92lkpd0ghkgvlwgql8jzw7zmlk", - "depends": ["clusterGeneration", "doParallel", "foreach", "MASS", "matrixcalc", "moments", "mvtnorm"] + "depends": ["MASS", "clusterGeneration", "doParallel", "foreach", "matrixcalc", "moments", "mvtnorm"] }, "skewlmm": { "name": "skewlmm", "version": "1.1.0", "sha256": "04jxf7bwh71r33s1s2xhiy0ipfaqz97ya86rr4m0f5kxnb942ggv", - "depends": ["dplyr", "furrr", "future", "ggplot2", "ggrepel", "haven", "matrixcalc", "moments", "MomTrunc", "mvtnorm", "nlme", "numDeriv", "optimParallel", "purrr", "relliptical", "TruncatedNormal"] + "depends": ["MomTrunc", "TruncatedNormal", "dplyr", "furrr", "future", "ggplot2", "ggrepel", "haven", "matrixcalc", "moments", "mvtnorm", "nlme", "numDeriv", "optimParallel", "purrr", "relliptical"] }, "skewsamp": { "name": "skewsamp", @@ -110855,19 +112007,19 @@ "name": "skipTrack", "version": "0.1.0", "sha256": "0s5w2jixm52pbpi2cmgf9s1d6prs49dz4kcrr135d0nbdx34ma2w", - "depends": ["doParallel", "foreach", "genMCMCDiag", "ggplot2", "ggtext", "glmnet", "gridExtra", "LaplacesDemon", "lifecycle", "mvtnorm", "optimg"] + "depends": ["LaplacesDemon", "doParallel", "foreach", "genMCMCDiag", "ggplot2", "ggtext", "glmnet", "gridExtra", "lifecycle", "mvtnorm", "optimg"] }, "sklarsomega": { "name": "sklarsomega", "version": "3.0-2", "sha256": "027rx1x5hsn0qx7s6s2sqf13p49jbhi6g7w0fzfqf619p3fzkghg", - "depends": ["dfoptim", "extraDistr", "hash", "LaplacesDemon", "Matrix", "mcmcse", "numDeriv", "spam"] + "depends": ["LaplacesDemon", "Matrix", "dfoptim", "extraDistr", "hash", "mcmcse", "numDeriv", "spam"] }, "skm": { "name": "skm", "version": "0.1.5.4", "sha256": "06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v", - "depends": ["data_table", "magrittr", "plyr", "Rcpp", "RcppArmadillo", "RcppParallel"] + "depends": ["Rcpp", "RcppArmadillo", "RcppParallel", "data_table", "magrittr", "plyr"] }, "skmeans": { "name": "skmeans", @@ -110879,7 +112031,7 @@ "name": "skpr", "version": "1.7.1", "sha256": "1g19pq73map54sypkarvyw191zgf4cbmr1hskr8amg75wvw8mg11", - "depends": ["car", "doFuture", "doParallel", "doRNG", "foreach", "future", "iterators", "lme4", "lmerTest", "magrittr", "progress", "progressr", "Rcpp", "RcppEigen", "scales", "survival", "viridis"] + "depends": ["Rcpp", "RcppEigen", "car", "doFuture", "doParallel", "doRNG", "foreach", "future", "iterators", "lme4", "lmerTest", "magrittr", "progress", "progressr", "scales", "survival", "viridis"] }, "skylight": { "name": "skylight", @@ -110891,13 +112043,13 @@ "name": "skynet", "version": "1.4.3", "sha256": "08a5p3rk0qhsxawdxj5sfw07rdk56x6viy37w1b0hxqaxxxv239i", - "depends": ["data_table", "dplyr", "geosphere", "ggplot2", "ggrepel", "httr", "igraph", "leaflet", "maps", "RCurl", "stringr"] + "depends": ["RCurl", "data_table", "dplyr", "geosphere", "ggplot2", "ggrepel", "httr", "igraph", "leaflet", "maps", "stringr"] }, "skyscapeR": { "name": "skyscapeR", "version": "1.0.0", "sha256": "1x3s003wdmnf0h1k3gl6cvd35g516y7v2yzahr3wxk2np832kjli", - "depends": ["doParallel", "foreach", "httr", "MESS", "numDeriv", "oce", "plotrix", "png", "RColorBrewer", "rootSolve", "swephR", "zoo"] + "depends": ["MESS", "RColorBrewer", "doParallel", "foreach", "httr", "numDeriv", "oce", "plotrix", "png", "rootSolve", "swephR", "zoo"] }, "slackr": { "name": "slackr", @@ -110907,8 +112059,8 @@ }, "slam": { "name": "slam", - "version": "0.1-50", - "sha256": "1ggqcf8l1z2hpi7qy4mg0d2ps48bjjb8z1y1xz6fq162cqrbz6bq", + "version": "0.1-52", + "sha256": "09j1k63nw1m1vgblnla6s52v2337ixs958jmlzkjjz1xb01yd0y3", "depends": [] }, "slanter": { @@ -110927,13 +112079,13 @@ "name": "slasso", "version": "1.0.0", "sha256": "0k83szk6jzvn5353p9ia2ipmjyl65ivx95rj62rq8dyjfrdyzs0d", - "depends": ["cxxfunplus", "fda", "fda_usc", "inline", "MASS", "matrixcalc", "matrixStats", "plot3D", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "cxxfunplus", "fda", "fda_usc", "inline", "matrixStats", "matrixcalc", "plot3D"] }, "slca": { "name": "slca", "version": "1.0.0", "sha256": "0wllwz9cn9wvxwb4gd4g3blwhaplmfdxx06jki41ii64sq9cxbyq", - "depends": ["DiagrammeR", "magrittr", "MASS", "Rcpp"] + "depends": ["DiagrammeR", "MASS", "Rcpp", "magrittr"] }, "slcm": { "name": "slcm", @@ -110957,7 +112109,7 @@ "name": "sleeperapi", "version": "1.1.1", "sha256": "1lmpcpd407bz7fwb20c8m5vaxq7l7sgna7jmh6mjy579az0fzllj", - "depends": ["dplyr", "DT", "htmltools", "htmlwidgets", "httr", "jsonlite", "plotly", "purrr", "RColorBrewer", "rlang", "scales", "shiny", "shinycssloaders", "shinyWidgets", "stringr", "tidyr"] + "depends": ["DT", "RColorBrewer", "dplyr", "htmltools", "htmlwidgets", "httr", "jsonlite", "plotly", "purrr", "rlang", "scales", "shiny", "shinyWidgets", "shinycssloaders", "stringr", "tidyr"] }, "sleepr": { "name": "sleepr", @@ -110987,13 +112139,13 @@ "name": "slfm", "version": "1.0.2", "sha256": "1xrla1c91x636vi55ajhaiz10293bppxylpm2jqrmfgs9gh2rbrn", - "depends": ["coda", "lattice", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "lattice"] }, "slgf": { "name": "slgf", "version": "2.0.0", "sha256": "07gkl35hq3w42kw103gn9f15s0z4n49nq39ip1nzm3s6d1ad6in6", - "depends": ["numDeriv", "Rdpack"] + "depends": ["Rdpack", "numDeriv"] }, "slickR": { "name": "slickR", @@ -111017,13 +112169,13 @@ "name": "slim", "version": "0.1.1", "sha256": "0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1", - "depends": ["data_table", "MASS"] + "depends": ["MASS", "data_table"] }, "slimrec": { "name": "slimrec", "version": "0.1.0", "sha256": "1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377", - "depends": ["assertthat", "bigmemory", "glmnet", "Matrix", "pbapply"] + "depends": ["Matrix", "assertthat", "bigmemory", "glmnet", "pbapply"] }, "slippymath": { "name": "slippymath", @@ -111043,12 +112195,6 @@ "sha256": "00fk5fr5zsk2qxc1kfhmshhjxgnamm3401089sx8m2l529zd6r8j", "depends": ["codetools", "crayon", "purrr", "rlang", "tibble"] }, - "slopeOP": { - "name": "slopeOP", - "version": "1.0.1", - "sha256": "0rcxa2wdj57aj7n17sxv05dvwchhfsnhssmc372xjfgi72gdnv58", - "depends": ["Rcpp"] - }, "slouch": { "name": "slouch", "version": "2.1.5", @@ -111059,7 +112205,7 @@ "name": "slowraker", "version": "0.1.1", "sha256": "0glc3ldvbqkvzfvhs4s5mzx1kfz05px4k7rx5jfp9dm9d0gfpvsx", - "depends": ["NLP", "openNLP", "SnowballC"] + "depends": ["NLP", "SnowballC", "openNLP"] }, "slp": { "name": "slp", @@ -111071,7 +112217,7 @@ "name": "slr", "version": "1.3.0", "sha256": "1pj23nxp5c12z37fssqc5vyyig9qsa7q4ziyygmj1gm7di313hdc", - "depends": ["gmp", "ibd", "MASS"] + "depends": ["MASS", "gmp", "ibd"] }, "slurmR": { "name": "slurmR", @@ -111095,13 +112241,13 @@ "name": "smacof", "version": "2.1-6", "sha256": "06mdvkbc9q8b5sbqnx4c5mq06jkqspvc4bb7zn15byz8ybv5h7aa", - "depends": ["candisc", "colorspace", "doParallel", "e1071", "ellipse", "foreach", "Hmisc", "MASS", "nnls", "plotrix", "polynom", "weights", "wordcloud"] + "depends": ["Hmisc", "MASS", "candisc", "colorspace", "doParallel", "e1071", "ellipse", "foreach", "nnls", "plotrix", "polynom", "weights", "wordcloud"] }, "smacofx": { "name": "smacofx", - "version": "0.6-6", - "sha256": "0i4v3qbizqniaf92nv2q2860k454hwnhqb789p0nkkcyh9wgyrc9", - "depends": ["MASS", "minqa", "plotrix", "ProjectionBasedClustering", "smacof", "vegan", "weights"] + "version": "1.5-3", + "sha256": "19pb825b7fx6ah0njap03yg763swhbfw79vhk25d37yvcidj7nm3", + "depends": ["MASS", "ProjectionBasedClustering", "minqa", "plotrix", "smacof", "vegan", "weights"] }, "smacpod": { "name": "smacpod", @@ -111125,13 +112271,13 @@ "name": "smallstuff", "version": "1.0.3", "sha256": "17x73fcrvnw71bn52mg6lgpm9is99djy5avpnyqsffhqa8x6mzsv", - "depends": ["class", "data_table", "igraph", "matlib", "Matrix", "pryr", "ROCR"] + "depends": ["Matrix", "ROCR", "class", "data_table", "igraph", "matlib", "pryr"] }, "smam": { "name": "smam", "version": "0.7.2", "sha256": "0p7k4x27rbfmibifq9hn161v57zvlgw088inq2gnmm95sh6kqh1v", - "depends": ["doParallel", "doSNOW", "EnvStats", "foreach", "Matrix", "nloptr", "numDeriv", "Rcpp", "RcppGSL", "RcppParallel"] + "depends": ["EnvStats", "Matrix", "Rcpp", "RcppGSL", "RcppParallel", "doParallel", "doSNOW", "foreach", "nloptr", "numDeriv"] }, "smartDesign": { "name": "smartDesign", @@ -111161,7 +112307,7 @@ "name": "smartsnp", "version": "1.1.0", "sha256": "1gzzhys6bja55iclkji254kri6r3iamiw7bv881mp615wi9r3hx2", - "depends": ["bootSVD", "data_table", "foreach", "Rcpp", "RcppArmadillo", "Rfast", "RSpectra", "vegan", "vroom"] + "depends": ["RSpectra", "Rcpp", "RcppArmadillo", "Rfast", "bootSVD", "data_table", "foreach", "vegan", "vroom"] }, "smatr": { "name": "smatr", @@ -111179,7 +112325,7 @@ "name": "smcfcs", "version": "1.8.0", "sha256": "0l658ynkf3lb1nckfrgysj19m6735fi2k48r7l5qaf6jq7f3l3bh", - "depends": ["abind", "brglm2", "checkmate", "MASS", "rlang", "survival", "VGAM"] + "depends": ["MASS", "VGAM", "abind", "brglm2", "checkmate", "rlang", "survival"] }, "smcryptoR": { "name": "smcryptoR", @@ -111207,9 +112353,9 @@ }, "smdi": { "name": "smdi", - "version": "0.2.2", - "sha256": "0bjwh9qbcr8221k43gayridqrsr3sf7mwgvlwy76k9dmjr0bid63", - "depends": ["broom", "dplyr", "fastDummies", "forcats", "ggplot2", "glue", "gt", "Hotelling", "lifecycle", "magrittr", "mice", "naniar", "pROC", "randomForest", "stringr", "survival", "tableone", "tibble", "tidyr", "tidyselect"] + "version": "0.3.0", + "sha256": "0grgj1wf2pdcz1wangnsni5x6idqz19plr7jghq6p0a7w9b89d6q", + "depends": ["Hotelling", "broom", "caret", "dplyr", "fastDummies", "forcats", "ggplot2", "glue", "gt", "lifecycle", "magrittr", "mice", "naniar", "pROC", "randomForest", "stringr", "survival", "tableone", "tibble", "tidyr"] }, "smdocker": { "name": "smdocker", @@ -111221,7 +112367,7 @@ "name": "smerc", "version": "1.8.3", "sha256": "181av1l1r327iszxrihilvfiqbc4m4496g94i5r9vhhamvgk8cwm", - "depends": ["pbapply", "Rcpp", "RcppProgress"] + "depends": ["Rcpp", "RcppProgress", "pbapply"] }, "smetlite": { "name": "smetlite", @@ -111233,7 +112379,7 @@ "name": "smfishHmrf", "version": "0.1", "sha256": "1k6mpyp11zv5rc3k98baymr903p2pf424nf9xng20q1li8s8y2ab", - "depends": ["fs", "pracma", "Rdpack"] + "depends": ["Rdpack", "fs", "pracma"] }, "smfsb": { "name": "smfsb", @@ -111245,7 +112391,7 @@ "name": "smicd", "version": "1.1.5", "sha256": "0lcdclp2bxs5g47a49xhwqgsl15czg2pym0d6z287wj4ccpxihxh", - "depends": ["formula_tools", "Hmisc", "ineq", "laeken", "lme4", "mvtnorm", "truncnorm", "weights"] + "depends": ["Hmisc", "formula_tools", "ineq", "laeken", "lme4", "mvtnorm", "truncnorm", "weights"] }, "smidm": { "name": "smidm", @@ -111257,7 +112403,7 @@ "name": "smile", "version": "1.0.5", "sha256": "1474jfk6vqcx3jv0mlf45l93bnn3f2qgm2j03rbjid4skg811618", - "depends": ["Matrix", "mvtnorm", "numDeriv", "Rcpp", "RcppArmadillo", "sf"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "mvtnorm", "numDeriv", "sf"] }, "smirnov": { "name": "smirnov", @@ -111299,19 +112445,19 @@ "name": "smoof", "version": "1.6.0.3", "sha256": "1cazhnd0m5jjzixaqgqh2h3rsa2sw3k8slj5cmgm8v47aaqn91mg", - "depends": ["BBmisc", "checkmate", "ggplot2", "ParamHelpers", "Rcpp", "RcppArmadillo"] + "depends": ["BBmisc", "ParamHelpers", "Rcpp", "RcppArmadillo", "checkmate", "ggplot2"] }, "smooth": { "name": "smooth", - "version": "4.0.1", - "sha256": "0z9iacmrvlrz6rk1dmih6qqfgmav14aar2nkmk7f1gr5f285r56d", - "depends": ["generics", "greybox", "MASS", "nloptr", "pracma", "Rcpp", "RcppArmadillo", "statmod", "xtable", "zoo"] + "version": "4.0.2", + "sha256": "1q0sgn30hsak9nyy30nbslh39byhqygypi1kp6gp99qfdrgxflva", + "depends": ["MASS", "Rcpp", "RcppArmadillo", "generics", "greybox", "nloptr", "pracma", "statmod", "xtable", "zoo"] }, "smoothAPC": { "name": "smoothAPC", "version": "0.3", "sha256": "11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r", - "depends": ["colorspace", "lmtest", "quantreg", "rgl", "SparseM"] + "depends": ["SparseM", "colorspace", "lmtest", "quantreg", "rgl"] }, "smoothHR": { "name": "smoothHR", @@ -111347,7 +112493,7 @@ "name": "smoothic", "version": "1.2.0", "sha256": "11id442cgnk6a0nd0c20rz5ccxlq3hhpsmvmlvg93jf4v6c2046z", - "depends": ["data_table", "dplyr", "ggplot2", "MASS", "numDeriv", "purrr", "rlang", "stringr", "tibble", "tidyr", "toOrdinal"] + "depends": ["MASS", "data_table", "dplyr", "ggplot2", "numDeriv", "purrr", "rlang", "stringr", "tibble", "tidyr", "toOrdinal"] }, "smoothie": { "name": "smoothie", @@ -111383,19 +112529,19 @@ "name": "smoots", "version": "1.1.4", "sha256": "1drlnh22gn6fdziplnja5w7gc5lyvpjq54aqqmwfh6h78ivcg0vs", - "depends": ["future", "future_apply", "progress", "progressr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "future", "future_apply", "progress", "progressr"] }, "smosr": { "name": "smosr", "version": "1.0.1", "sha256": "1arj4skjqnwfk4yr26iwp1j9pjp75xk18hap0ff1wqpxmvajlmgj", - "depends": ["fields", "lubridate", "ncdf4", "RCurl", "terra", "tidyr"] + "depends": ["RCurl", "fields", "lubridate", "ncdf4", "terra", "tidyr"] }, "smotefamily": { "name": "smotefamily", "version": "1.4.0", "sha256": "05ck6c4pldqqspb7abjh8vabc3g0fp6ivfbd9y2q2rm031mil4p2", - "depends": ["dbscan", "FNN", "igraph"] + "depends": ["FNN", "dbscan", "igraph"] }, "smovie": { "name": "smovie", @@ -111411,9 +112557,9 @@ }, "smplot2": { "name": "smplot2", - "version": "0.2.3", - "sha256": "1cn4sv7a7gra2b7xwkwjglaygrrcd9b6mdh00dgq3mpf0b8rllvg", - "depends": ["cowplot", "dplyr", "ggplot2", "ggpubr", "Hmisc", "patchwork", "pwr", "rlang", "tibble", "zoo"] + "version": "0.2.4", + "sha256": "1aigy0md8xgv9yfr0391wpc9a36566m5avm71g48688hg26djrh7", + "depends": ["Hmisc", "cowplot", "dplyr", "ggplot2", "ggpubr", "patchwork", "pwr", "rlang", "tibble", "zoo"] }, "sms": { "name": "sms", @@ -111431,13 +112577,13 @@ "name": "smurf", "version": "1.1.5", "sha256": "1gpzzj67x0i70vw1x4rv56mhk2b74ynvdsy93rzmdk6b2h3dvv46", - "depends": ["catdata", "glmnet", "MASS", "Matrix", "mgcv", "RColorBrewer", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Matrix", "RColorBrewer", "Rcpp", "RcppArmadillo", "catdata", "glmnet", "mgcv"] }, "smvgraph": { "name": "smvgraph", "version": "0.1.2", "sha256": "06pvnrhd3q913nxhk1icj11xkd1is3qi31b0kv6zbc0qkixn1ym7", - "depends": ["DescTools", "fmsb", "MASS", "shiny", "shinydashboard", "sortable"] + "depends": ["DescTools", "MASS", "fmsb", "shiny", "shinydashboard", "sortable"] }, "sn": { "name": "sn", @@ -111449,7 +112595,7 @@ "name": "snSMART", "version": "0.2.3", "sha256": "0d05wn2w9x7gapaz94zpf251rh2mld8agsir3hqbzjyil14xrpv6", - "depends": ["bayestestR", "condMVNorm", "cubature", "EnvStats", "geepack", "HDInterval", "pracma", "rjags", "tidyr", "truncdist"] + "depends": ["EnvStats", "HDInterval", "bayestestR", "condMVNorm", "cubature", "geepack", "pracma", "rjags", "tidyr", "truncdist"] }, "sna": { "name": "sna", @@ -111461,7 +112607,7 @@ "name": "snahelper", "version": "1.4.2", "sha256": "04l6ad4rj45kr7p98nbpsqbqppv2bgp71n6zph0aqm6b13hp0jyy", - "depends": ["colourpicker", "DT", "formatR", "ggplot2", "ggraph", "graphlayouts", "igraph", "miniUI", "rstudioapi", "shiny"] + "depends": ["DT", "colourpicker", "formatR", "ggplot2", "ggraph", "graphlayouts", "igraph", "miniUI", "rstudioapi", "shiny"] }, "snakecase": { "name": "snakecase", @@ -111503,7 +112649,7 @@ "name": "snfa", "version": "0.0.1", "sha256": "01k2nw8b8mwsd07jijfqk3rj88l9m36c5jai7qma56fjxx23s3wb", - "depends": ["abind", "ggplot2", "prodlim", "quadprog", "Rdpack", "rootSolve"] + "depends": ["Rdpack", "abind", "ggplot2", "prodlim", "quadprog", "rootSolve"] }, "snha": { "name": "snha", @@ -111539,7 +112685,7 @@ "name": "snowboot", "version": "1.0.2", "sha256": "0jj3p0g4rwml8vmlwj10rfisxfjlipcrpvq5z134z4j35jp6ggv3", - "depends": ["igraph", "Rcpp", "Rdpack"] + "depends": ["Rcpp", "Rdpack", "igraph"] }, "snowfall": { "name": "snowfall", @@ -111557,7 +112703,7 @@ "name": "snowquery", "version": "1.2.0", "sha256": "1q9qbz35pid2y010gs69yqb4x2cq56xkgxk1grl8hhvp4fb1iszg", - "depends": ["DBI", "reticulate", "RPostgres", "RSQLite", "yaml"] + "depends": ["DBI", "RPostgres", "RSQLite", "reticulate", "yaml"] }, "snpAIMeR": { "name": "snpAIMeR", @@ -111569,25 +112715,25 @@ "name": "snpReady", "version": "0.9.6", "sha256": "1r96j8zh84dn7qh3zgl0p0v3a80hx2wd3c4jgjlr43hzl7yglpqr", - "depends": ["impute", "Matrix", "matrixcalc", "rgl", "stringr"] + "depends": ["Matrix", "impute", "matrixcalc", "rgl", "stringr"] }, "snplinkage": { "name": "snplinkage", "version": "1.0.0", "sha256": "112wg2gnr4ikj916nb71sm39g41ls05d4j56hhml9hfnkiv76x5p", - "depends": ["gdsfmt", "ggplot2", "gtable", "GWASTools", "magrittr"] + "depends": ["GWASTools", "gdsfmt", "ggplot2", "gtable", "magrittr"] }, "snplist": { "name": "snplist", "version": "0.18.2", "sha256": "1sa2s3br4agx920jpr250iih61p99v500nh0c1w99w0846g9908c", - "depends": ["biomaRt", "DBI", "R_utils", "Rcpp", "RSQLite"] + "depends": ["DBI", "RSQLite", "R_utils", "Rcpp", "biomaRt"] }, "snpsettest": { "name": "snpsettest", "version": "0.1.2", "sha256": "0djz39b59x3kd5albdwjsgvln1qbm9xfbbglbym87xc3924sbwqj", - "depends": ["data_table", "gaston", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "gaston"] }, "sns": { "name": "sns", @@ -111611,7 +112757,7 @@ "name": "soc.ca", "version": "0.8.0", "sha256": "16l0synym91b7djgzdcz43dnvw44fkyxky9gm37ixbxzq1czdp9w", - "depends": ["dplyr", "ellipse", "FactoMineR", "flextable", "forcats", "ggplot2", "ggrepel", "gridExtra", "htmlTable", "magrittr", "Matrix", "purrr", "RColorBrewer", "reshape2", "rlang", "shiny", "stringr", "tibble", "tidyr"] + "depends": ["FactoMineR", "Matrix", "RColorBrewer", "dplyr", "ellipse", "flextable", "forcats", "ggplot2", "ggrepel", "gridExtra", "htmlTable", "magrittr", "purrr", "reshape2", "rlang", "shiny", "stringr", "tibble", "tidyr"] }, "socceR": { "name": "socceR", @@ -111677,7 +112823,7 @@ "name": "sofa", "version": "0.4.0", "sha256": "1w78f8pnx4vh6znpwwcy9k4j795zji4bv88mi6ihdv09ar7if7yv", - "depends": ["crul", "jsonlite", "mime", "R6"] + "depends": ["R6", "crul", "jsonlite", "mime"] }, "softImpute": { "name": "softImpute", @@ -111699,15 +112845,15 @@ }, "soilDB": { "name": "soilDB", - "version": "2.8.3", - "sha256": "1b85j3fpcvzm05pyv6zmd7j8af1nvkrbpsiz5cxzcx1l8kg1fmy4", - "depends": ["aqp", "curl", "data_table", "DBI"] + "version": "2.8.4", + "sha256": "122vwi9149xd8cadm4lrbq1fdxvdxzh3vs23zdvcbsm4dmzqhr6k", + "depends": ["DBI", "aqp", "curl", "data_table"] }, "soilassessment": { "name": "soilassessment", "version": "0.2.6", "sha256": "0cgyji88q3r6b57q32nk8xgxb4q29678h8zgh9ywxhr3mr40i0qv", - "depends": ["caret", "deSolve", "e1071", "FuzzyAHP", "googledrive", "Hmisc", "nnet", "png", "randomForest", "raster", "sf", "soiltexture", "sp", "terra"] + "depends": ["FuzzyAHP", "Hmisc", "caret", "deSolve", "e1071", "googledrive", "nnet", "png", "randomForest", "raster", "sf", "soiltexture", "sp", "terra"] }, "soilchemistry": { "name": "soilchemistry", @@ -111725,18 +112871,18 @@ "name": "soilhypfit", "version": "0.1-7", "sha256": "1ssz9w9ibw8mban0fq50j4lgr8vmkrsn8v9cpkg0wl28z1hqbhz3", - "depends": ["mgcv", "nloptr", "quadprog", "Rmpfr", "snowfall", "SoilHyP"] + "depends": ["Rmpfr", "SoilHyP", "mgcv", "nloptr", "quadprog", "snowfall"] }, "soilphysics": { "name": "soilphysics", "version": "5.0", "sha256": "1ijnqlb52c3vm6ydiginp0f82vkip0kbsvbd9yac3scrc5g1b5z3", - "depends": ["boot", "fields", "MASS", "rhandsontable", "shiny", "shinydashboard"] + "depends": ["MASS", "boot", "fields", "rhandsontable", "shiny", "shinydashboard"] }, "soiltestcorr": { "name": "soiltestcorr", - "version": "2.2.0", - "sha256": "1c5w3w4nrxdy2cdch048kmb35jqm8rws0am31vgn263y1045shwd", + "version": "2.2.1", + "sha256": "1p1nimd7d0m2qb2rdj0pfrcw95rrch2vqkwhqbwsn2bxbgn942yj", "depends": ["AICcmodavg", "data_table", "dplyr", "ggplot2", "ggpp", "minpack_lm", "modelr", "nlraa", "nlstools", "purrr", "rlang", "smatr", "tidyr"] }, "soiltexture": { @@ -111761,7 +112907,7 @@ "name": "solaR", "version": "0.46", "sha256": "1hv9rj8kvqh5i77s6cls7hknz43scdsi5zjh04mjg0gynb265f4p", - "depends": ["lattice", "latticeExtra", "RColorBrewer", "zoo"] + "depends": ["RColorBrewer", "lattice", "latticeExtra", "zoo"] }, "solarPos": { "name": "solarPos", @@ -111779,7 +112925,7 @@ "name": "solitude", "version": "1.1.3", "sha256": "1cqbcm72fq13lp0lazfngdylcasck1ffrj16ggxlryzps1181rhy", - "depends": ["data_table", "future_apply", "igraph", "lgr", "R6", "ranger"] + "depends": ["R6", "data_table", "future_apply", "igraph", "lgr", "ranger"] }, "solrad": { "name": "solrad", @@ -111791,12 +112937,12 @@ "name": "solrium", "version": "1.2.0", "sha256": "16x4gjk0x6m9yjq9sk3kwbw8qm7w16vmbnfy5xa9zikw96cl3iky", - "depends": ["crul", "dplyr", "jsonlite", "plyr", "R6", "tibble", "xml2"] + "depends": ["R6", "crul", "dplyr", "jsonlite", "plyr", "tibble", "xml2"] }, "solvebio": { "name": "solvebio", - "version": "2.14.0", - "sha256": "182ybiia1qc25fnc9wrzrfzvgd4m340nrrn7llx0pbc1iq1q7as2", + "version": "2.15.0", + "sha256": "0risi2s3m73hn7ip3x6gva6cr8dw9vmk237jncx9hcq07n5wr630", "depends": ["httr", "jsonlite", "mime"] }, "som": { @@ -111817,6 +112963,12 @@ "sha256": "05hm6yqh1d10kbgvy5j0cj2lvcnib4p9lmjcl32zxy1hazpagplq", "depends": ["reportr"] }, + "somaticflags": { + "name": "somaticflags", + "version": "0.1.0", + "sha256": "0b7g1i8qgrks6prdcmhdqpq9ivrlk47j8najq0baz02drrrf3fhm", + "depends": [] + }, "someMTP": { "name": "someMTP", "version": "1.4.1.1", @@ -111825,9 +112977,9 @@ }, "sommer": { "name": "sommer", - "version": "4.3.4", - "sha256": "0c6g0ldla3ix40aw0h7mylz3xlvdnvrlz288hjkq86r8g9i5mq2b", - "depends": ["crayon", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress"] + "version": "4.3.5", + "sha256": "0lhbrv4m44zgd178xpm5h0qdn54ldfjz7c96mmhm41pz0zn97h5h", + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "crayon"] }, "somspace": { "name": "somspace", @@ -111851,7 +113003,7 @@ "name": "sonicscrewdriver", "version": "0.0.7", "sha256": "0z18hyicbh6naxq5hz5bzx61x7kr1j5jsk98j71m8dalch2wysbm", - "depends": ["ggplot2", "hms", "jsonlite", "mime", "Rdpack", "seewave", "stringi", "suncalc", "tuneR"] + "depends": ["Rdpack", "ggplot2", "hms", "jsonlite", "mime", "seewave", "stringi", "suncalc", "tuneR"] }, "sonify": { "name": "sonify", @@ -111863,7 +113015,7 @@ "name": "soptdmaeA", "version": "1.0.0", "sha256": "03n1y82myq0rz14awjnx9nx1dz3dxqq58m13cw7a7ncap7fmw9r5", - "depends": ["igraph", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "igraph"] }, "soql": { "name": "soql", @@ -111875,7 +113027,7 @@ "name": "sorcering", "version": "1.0.1", "sha256": "195m83n57fsxg3w59y8q33b4hl9ng752lxdnvmvfb1m7iy1yaj49", - "depends": ["mathjaxr", "Rcpp", "RcppArmadillo", "Rdpack"] + "depends": ["Rcpp", "RcppArmadillo", "Rdpack", "mathjaxr"] }, "sorocs": { "name": "sorocs", @@ -111897,15 +113049,15 @@ }, "sos": { "name": "sos", - "version": "2.1-7", - "sha256": "11q698wr3xnzr0nmzb9frifrizfl27f1ymdi6mrvyzw0y9cv3sq6", + "version": "2.1-8", + "sha256": "02wvdskc6fpb9yp83703xh332g69dhmvcfdjr47fcbfrzmvw1r0q", "depends": ["brew"] }, "sotkanet": { "name": "sotkanet", - "version": "0.9.79", - "sha256": "1d6g09rf7irk3d8hkm6ahp8zl6lj24jnipwvzr0njx2sqi3fwd4f", - "depends": ["curl", "httr", "jsonlite"] + "version": "0.10.1", + "sha256": "1384rsvhz39i8s8wvgik3jgv1h9yrdy7qmxpvmdqay6wjimmjz09", + "depends": ["RefManageR", "curl", "digest", "frictionless", "httr2", "lubridate", "magrittr"] }, "sotu": { "name": "sotu", @@ -111923,7 +113075,7 @@ "name": "soundClass", "version": "0.0.9.2", "sha256": "0z697asv2kzs93b45ndbkxfdzq3fmi1f6aprvpxps4x354gg2pi6", - "depends": ["DBI", "dbplyr", "dplyr", "generics", "htmltools", "keras", "magrittr", "RSQLite", "seewave", "shiny", "shinyBS", "shinyFiles", "shinyjs", "signal", "tuneR", "zoo"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "generics", "htmltools", "keras", "magrittr", "seewave", "shiny", "shinyBS", "shinyFiles", "shinyjs", "signal", "tuneR", "zoo"] }, "soundecology": { "name": "soundecology", @@ -111951,9 +113103,9 @@ }, "sox": { "name": "sox", - "version": "1.1", - "sha256": "03lnl431k0fr19akhdwzci2dgmcclkqqj30984wp05ldn87drcyy", - "depends": ["glmnet", "Rcpp", "survival"] + "version": "1.2", + "sha256": "1phrs0mxycimzf7zz0g7bzkdkzf0fvqa86jwqnvmfyjjzqplpf2p", + "depends": ["Rcpp", "glmnet", "survival"] }, "sp": { "name": "sp", @@ -111971,13 +113123,13 @@ "name": "spANOVA", "version": "0.99.4", "sha256": "0y1kqqfrl9rrskyvmzdjw9zyjgyqmz8b3cfgbba49n41wx2aiw79", - "depends": ["ape", "car", "DT", "geoR", "gtools", "knitr", "MASS", "Matrix", "multcomp", "multcompView", "mvtnorm", "rmarkdown", "ScottKnott", "shiny", "shinyBS", "shinycssloaders", "shinythemes", "spatialreg", "spdep", "xtable"] + "depends": ["DT", "MASS", "Matrix", "ScottKnott", "ape", "car", "geoR", "gtools", "knitr", "multcomp", "multcompView", "mvtnorm", "rmarkdown", "shiny", "shinyBS", "shinycssloaders", "shinythemes", "spatialreg", "spdep", "xtable"] }, "spAbundance": { "name": "spAbundance", "version": "0.1.3", "sha256": "02qvgyiyrwaz2jgfp746fyr1bwd8m4lwjijaml9ychq4rdmrfjli", - "depends": ["abind", "coda", "doParallel", "foreach", "lme4", "RANN"] + "depends": ["RANN", "abind", "coda", "doParallel", "foreach", "lme4"] }, "spAddins": { "name": "spAddins", @@ -111989,25 +113141,25 @@ "name": "spBFA", "version": "1.3", "sha256": "1bi3lhbx37zlj2x0nql51x5422zxc1gcbn8vqjf81badwf80fwsp", - "depends": ["msm", "mvtnorm", "pgdraw", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "msm", "mvtnorm", "pgdraw"] }, "spBayes": { "name": "spBayes", "version": "0.4-7", "sha256": "18rb4k7yfnz07ilrgdipbl30a78zzl3yaikd999l482v1a95hibr", - "depends": ["coda", "Formula", "magic", "Matrix", "sp"] + "depends": ["Formula", "Matrix", "coda", "magic", "sp"] }, "spBayesSurv": { "name": "spBayesSurv", "version": "1.1.8", "sha256": "0z91k88m5bh8ipicb43kknxshjr6dwr6whfkm28j49xwjrm4ydsy", - "depends": ["coda", "fields", "MASS", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "coda", "fields", "survival"] }, "spCP": { "name": "spCP", "version": "1.3", "sha256": "0rphd8zawr2r14dzwv77plk5xw020pkc26ir72qiqc1acin42xd1", - "depends": ["msm", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "msm", "mvtnorm"] }, "spData": { "name": "spData", @@ -112037,7 +113189,7 @@ "name": "spGARCH", "version": "0.2.2", "sha256": "1wrmk2ybgysvibfy8vvp7pyqda5apqp0jxjfp3hlb416fza52966", - "depends": ["Matrix", "nleqslv", "Rcpp", "RcppEigen", "Rsolnp", "spdep", "truncnorm"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rsolnp", "nleqslv", "spdep", "truncnorm"] }, "spINAR": { "name": "spINAR", @@ -112061,13 +113213,19 @@ "name": "spNNGP", "version": "1.0.0", "sha256": "0z09hxmm2pbxsbm3zqk839z2gb3g2n2hqkahcbvcgywrqn3v8cal", - "depends": ["coda", "Formula", "RANN"] + "depends": ["Formula", "RANN", "coda"] + }, + "spNetwork": { + "name": "spNetwork", + "version": "0.4.4.3", + "sha256": "18g885w54d5hx9pwbqwz28gs723h9wpnfhr4a0yl37j5i3rasccx", + "depends": ["BH", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "abind", "cubature", "data_table", "dbscan", "future_apply", "ggplot2", "igraph", "progressr", "sf", "sfheaders", "spdep"] }, "spOccupancy": { "name": "spOccupancy", "version": "0.7.6", "sha256": "0gl6z2dch254nmyd19w7z3jmivadzvv27ymsbn1rk08qm19bf69g", - "depends": ["abind", "coda", "doParallel", "foreach", "lme4", "RANN", "spAbundance"] + "depends": ["RANN", "abind", "coda", "doParallel", "foreach", "lme4", "spAbundance"] }, "spRingsteen": { "name": "spRingsteen", @@ -112079,7 +113237,7 @@ "name": "spTDyn", "version": "2.0.2", "sha256": "010x3rjncasly1scngwyiys7asmk4ay51bzhk0zfjazwfkmqd12r", - "depends": ["coda", "sp", "spacetime", "spTimer"] + "depends": ["coda", "sp", "spTimer", "spacetime"] }, "spThin": { "name": "spThin", @@ -112097,7 +113255,7 @@ "name": "spaMM", "version": "4.5.0", "sha256": "1nr44jg73gnbc3q1ip7zmzl1n5bggbcgjrdlh6fg81zp41ba3ydv", - "depends": ["backports", "boot", "crayon", "geometry", "gmp", "MASS", "Matrix", "minqa", "nlme", "nloptr", "numDeriv", "pbapply", "proxy", "Rcpp", "RcppEigen", "ROI"] + "depends": ["MASS", "Matrix", "ROI", "Rcpp", "RcppEigen", "backports", "boot", "crayon", "geometry", "gmp", "minqa", "nlme", "nloptr", "numDeriv", "pbapply", "proxy"] }, "spaa": { "name": "spaa", @@ -112109,7 +113267,7 @@ "name": "spaceNet", "version": "1.2", "sha256": "1s2672icxs0qvdhl52xhllgvh1i9mjfrn5j3icyw6h61ljbnhy11", - "depends": ["MASS", "mclust", "permute", "RcppTN", "Rfast", "sna", "vegan"] + "depends": ["MASS", "RcppTN", "Rfast", "mclust", "permute", "sna", "vegan"] }, "spacefillr": { "name": "spacefillr", @@ -112155,15 +113313,15 @@ }, "spagmix": { "name": "spagmix", - "version": "0.4-1", - "sha256": "1vy951y7c1dabykqiij56qa56hc2lqahrav80698hpjbmxcr3w5f", + "version": "0.4-2", + "sha256": "0s3y0xapqn67hjl42g9w6jkcip5x5fbv8fyq2angkvqahps1nrg4", "depends": ["abind", "mvtnorm", "sparr", "spatstat", "spatstat_geom", "spatstat_random"] }, "spam": { "name": "spam", "version": "2.10-0", "sha256": "0ydc513jg7phzdqg8jp7210ayrrmxq91jafqzx8z1v0172i8d73i", - "depends": ["dotCall64", "Rcpp"] + "depends": ["Rcpp", "dotCall64"] }, "spam64": { "name": "spam64", @@ -112179,9 +113337,9 @@ }, "spant": { "name": "spant", - "version": "2.21.0", - "sha256": "0qaspbgphlicaak1c2n7bip60dv5wib1nxhv4x8za33s1v45h549", - "depends": ["abind", "expm", "fields", "irlba", "jsonlite", "minpack_lm", "mmand", "nloptr", "numDeriv", "plyr", "pracma", "ptw", "RNifti", "RNiftyReg", "signal", "stringr"] + "version": "2.22.0", + "sha256": "01snrzvyxc48dy2md3iac0c858i016wykmyhnk3p7gjh7bmh12s5", + "depends": ["RNifti", "RNiftyReg", "abind", "expm", "fields", "irlba", "jsonlite", "minpack_lm", "mmand", "nloptr", "numDeriv", "plyr", "pracma", "ptw", "signal", "stringr"] }, "sparcl": { "name": "sparcl", @@ -112223,7 +113381,7 @@ "name": "sparklyr", "version": "1.8.6", "sha256": "1yp3hwi1rhxx8sdhibcnjxsz1sd5jhfxn6cy9bphkwadrd19pn63", - "depends": ["config", "DBI", "dbplyr", "dplyr", "generics", "globals", "glue", "httr", "jsonlite", "openssl", "purrr", "rlang", "rstudioapi", "tidyr", "tidyselect", "uuid", "vctrs", "withr", "xml2"] + "depends": ["DBI", "config", "dbplyr", "dplyr", "generics", "globals", "glue", "httr", "jsonlite", "openssl", "purrr", "rlang", "rstudioapi", "tidyr", "tidyselect", "uuid", "vctrs", "withr", "xml2"] }, "sparklyr_flint": { "name": "sparklyr.flint", @@ -112263,9 +113421,9 @@ }, "sparr": { "name": "sparr", - "version": "2.3-10", - "sha256": "03dp6gvkpw8vjsf0p4igr2q4lgahn24j5f94h43jdrm4ppz860zh", - "depends": ["doParallel", "foreach", "misc3d", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_utils"] + "version": "2.3-15", + "sha256": "140gdk12dsl39k13g77iaqh0kzdi19ys3l00008fqn807mhcn2hz", + "depends": ["doParallel", "foreach", "misc3d", "spatstat", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_univar", "spatstat_utils"] }, "sparrpowR": { "name": "sparrpowR", @@ -112283,13 +113441,13 @@ "name": "sparseCov", "version": "0.0.1", "sha256": "1zgqfjahlbbwimxcn7l0jn316xd2a65s8gy4pck0aksyfqh56kb1", - "depends": ["Matrix", "mvnfast", "Rfast", "sparseMVN"] + "depends": ["Matrix", "Rfast", "mvnfast", "sparseMVN"] }, "sparseDFM": { "name": "sparseDFM", "version": "1.0", "sha256": "0w4xn0hyk3l94b9nplbhlbzkjkh2fx4cyqyjjn5x6dpkf1wj9aaz", - "depends": ["ggplot2", "Matrix", "Rcpp", "RcppArmadillo"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "ggplot2"] }, "sparseEigen": { "name": "sparseEigen", @@ -112301,13 +113459,13 @@ "name": "sparseFLMM", "version": "0.4.1", "sha256": "174lnhqig7m6fjfsj114ld059z9mjih3jzm5cq8iscxnhr9m11lr", - "depends": ["data_table", "MASS", "Matrix", "mgcv", "refund"] + "depends": ["MASS", "Matrix", "data_table", "mgcv", "refund"] }, "sparseGAM": { "name": "sparseGAM", "version": "1.0", "sha256": "0qqfsgrp0ll11mws0s54g5nsqxwn2j5kbs60q2zrviv6n8bs8xf0", - "depends": ["grpreg", "MASS", "pracma"] + "depends": ["MASS", "grpreg", "pracma"] }, "sparseHessianFD": { "name": "sparseHessianFD", @@ -112325,7 +113483,7 @@ "name": "sparseLDA", "version": "0.1-9", "sha256": "1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb", - "depends": ["elasticnet", "MASS", "mda"] + "depends": ["MASS", "elasticnet", "mda"] }, "sparseLRMatrix": { "name": "sparseLRMatrix", @@ -112353,8 +113511,8 @@ }, "sparseR": { "name": "sparseR", - "version": "0.2.3", - "sha256": "1q77n45kl1hqx5a6cr4hschj8zv0ymw8v7yvm748sdplan2dj417", + "version": "0.3.1", + "sha256": "166140mb4d63z59whg8c8478n5zx8jlmw7m4ji77ma9wws4pr6ww", "depends": ["dplyr", "magrittr", "ncvreg", "recipes", "rlang"] }, "sparseSEM": { @@ -112377,9 +113535,9 @@ }, "sparsegl": { "name": "sparsegl", - "version": "1.0.2", - "sha256": "0c5iqhq3rn5wsy8a5lj37b4spqhy46d7d5k5q3kn034amml4cyfb", - "depends": ["cli", "dotCall64", "ggplot2", "magrittr", "Matrix", "rlang", "RSpectra", "tidyr"] + "version": "1.1.0", + "sha256": "0931wsd905bhrqkwjdv6m3vg7wpzdqyvzkkqp5pcwilvrswh0kdb", + "depends": ["Matrix", "RSpectra", "cli", "dotCall64", "ggplot2", "magrittr", "rlang", "tidyr"] }, "sparseinv": { "name": "sparseinv", @@ -112409,7 +113567,7 @@ "name": "sparsereg", "version": "1.2", "sha256": "1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3", - "depends": ["coda", "ggplot2", "GIGrvg", "glmnet", "gridExtra", "MASS", "MCMCpack", "msm", "Rcpp", "RcppArmadillo", "VGAM"] + "depends": ["GIGrvg", "MASS", "MCMCpack", "Rcpp", "RcppArmadillo", "VGAM", "coda", "ggplot2", "glmnet", "gridExtra", "msm"] }, "sparsestep": { "name": "sparsestep", @@ -112427,13 +113585,13 @@ "name": "sparsevar", "version": "0.1.0", "sha256": "1kcy6bm04mccky529nryy5l001bv71hx304ysiabl4myakw0rwy7", - "depends": ["corpcor", "doParallel", "ggplot2", "glmnet", "Matrix", "mvtnorm", "ncvreg", "picasso", "reshape2"] + "depends": ["Matrix", "corpcor", "doParallel", "ggplot2", "glmnet", "mvtnorm", "ncvreg", "picasso", "reshape2"] }, "sparsevb": { "name": "sparsevb", "version": "0.1.0", "sha256": "1cigq8hwymrrkiy3iyrxsjjbj228ahrd7mq9lqar4jlb925jzqx4", - "depends": ["glmnet", "Rcpp", "RcppArmadillo", "RcppEnsmallen", "selectiveInference"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEnsmallen", "glmnet", "selectiveInference"] }, "sparsevctrs": { "name": "sparsevctrs", @@ -112463,7 +113621,7 @@ "name": "spass", "version": "1.3", "sha256": "1c148z0i3d185hnf54xmgppjrblv3b2s3sm0lmj78gvav04mj5s4", - "depends": ["geepack", "MASS", "multcomp", "mvtnorm", "Rcpp"] + "depends": ["MASS", "Rcpp", "geepack", "multcomp", "mvtnorm"] }, "spatPomp": { "name": "spatPomp", @@ -112493,13 +113651,13 @@ "name": "spathial", "version": "0.1.2", "sha256": "1vwzcwpmx8kwv821vjf940qd5am3k0shf1s14jva71mgxs70ddmb", - "depends": ["class", "igraph", "irlba", "knitr", "MASS", "matrixStats", "pracma", "rmarkdown", "Rtsne"] + "depends": ["MASS", "Rtsne", "class", "igraph", "irlba", "knitr", "matrixStats", "pracma", "rmarkdown"] }, "spaths": { "name": "spaths", - "version": "1.1.2", - "sha256": "08gzw4lbk288230309g1craf4jm5xv4kqxcbpy649g1cdzqq4lf1", - "depends": ["data_table", "Rcpp"] + "version": "1.1.3", + "sha256": "1637y3ws9ivjkc5k4r3cwza485ynyjya1wgk866g0h6v7rpfx7xq", + "depends": ["Rcpp", "data_table"] }, "spatial": { "name": "spatial", @@ -112529,13 +113687,13 @@ "name": "spatialTIME", "version": "1.3.4-5", "sha256": "0i5fcy2q53612kq1qjg2sp10lwsiva6nay0v2jl2mw28zx6p22s9", - "depends": ["crayon", "dixon", "dplyr", "furrr", "future", "ggplot2", "magrittr", "pbmcapply", "purrr", "RColorBrewer", "scales", "spatstat_explore", "spatstat_geom", "spatstat_univar", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["RColorBrewer", "crayon", "dixon", "dplyr", "furrr", "future", "ggplot2", "magrittr", "pbmcapply", "purrr", "scales", "spatstat_explore", "spatstat_geom", "spatstat_univar", "stringr", "tibble", "tidyr", "tidyselect"] }, "spatialising": { "name": "spatialising", "version": "0.6.0", "sha256": "0q2gj16crhr1s92pazj6zbhr03xjp0pqwdc64qanpxmv4sbm65wq", - "depends": ["comat", "Rcpp", "terra"] + "depends": ["Rcpp", "comat", "terra"] }, "spatialprobit": { "name": "spatialprobit", @@ -112547,13 +113705,13 @@ "name": "spatialreg", "version": "1.3-4", "sha256": "0sgvcqswfpa9aq1x2ir1d5vg52gny1r1l15g66nk0113vvbrz982", - "depends": ["boot", "coda", "LearnBayes", "MASS", "Matrix", "multcomp", "nlme", "sf", "spData", "spdep"] + "depends": ["LearnBayes", "MASS", "Matrix", "boot", "coda", "multcomp", "nlme", "sf", "spData", "spdep"] }, "spatialrisk": { "name": "spatialrisk", "version": "0.7.1", "sha256": "1r6dr4n3d0x1yb4vcbfq0aqdqmy0h4n73snl86wrk86agvi5rmwp", - "depends": ["classInt", "colourvalues", "data_table", "dplyr", "fs", "GenSA", "geohashTools", "ggplot2", "leafem", "leafgl", "leaflet", "Rcpp", "RcppProgress", "sf", "tmap", "units", "viridis"] + "depends": ["GenSA", "Rcpp", "RcppProgress", "classInt", "colourvalues", "data_table", "dplyr", "fs", "geohashTools", "ggplot2", "leafem", "leafgl", "leaflet", "sf", "tmap", "units", "viridis"] }, "spatialsample": { "name": "spatialsample", @@ -112565,13 +113723,13 @@ "name": "spatialwarnings", "version": "3.0.3", "sha256": "03a0gb8v6028v6q5w3iap8fn9nkb2rpnabqgzmr2dyxnpfgr9dn3", - "depends": ["future", "future_apply", "ggplot2", "gsl", "plyr", "Rcpp", "RcppArmadillo", "segmented"] + "depends": ["Rcpp", "RcppArmadillo", "future", "future_apply", "ggplot2", "gsl", "plyr", "segmented"] }, "spatialwidget": { "name": "spatialwidget", "version": "0.2.5", "sha256": "01w0iwwjfbb8cxfs3l1vxlay8x6694d7c7ksrfrdd003h7dxwksj", - "depends": ["BH", "colourvalues", "geojsonsf", "geometries", "interleave", "jsonify", "rapidjsonr", "Rcpp", "sfheaders"] + "depends": ["BH", "Rcpp", "colourvalues", "geojsonsf", "geometries", "interleave", "jsonify", "rapidjsonr", "sfheaders"] }, "spatsoc": { "name": "spatsoc", @@ -112581,87 +113739,87 @@ }, "spatstat": { "name": "spatstat", - "version": "3.0-8", - "sha256": "0ghhj161n7bxd6hpk3hz6lq2gv8bwx5clrdp729lfyi9d1xjw162", - "depends": ["spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_utils"] + "version": "3.1-1", + "sha256": "04jmyngwzdb1v5yzcmnsj26kaaxxvhjnmdp7is5nrry632c30jan", + "depends": ["spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_univar", "spatstat_utils"] }, "spatstat_Knet": { "name": "spatstat.Knet", - "version": "3.0-2", - "sha256": "1yvdasrxmsa2m9016kclb33kv5893fsz5rcr416yhpf6jixdsfh8", - "depends": ["Matrix", "spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_utils"] + "version": "3.1-0", + "sha256": "1n9hqq0pamk4bm9jbl1plpsa6ynab7kll6j3dhcvpmyai462wcxa", + "depends": ["Matrix", "spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_univar", "spatstat_utils"] }, "spatstat_data": { "name": "spatstat.data", - "version": "3.0-4", - "sha256": "1s0ns5nhgigfn3d9rdy3f4ymnwj1w71v26iphkhwxddm9qzk80yi", + "version": "3.1-2", + "sha256": "0xqb94xm095qwxkhfrjqv7qwyxfs9i2xrwq06ir0y15q0dil36wv", "depends": ["Matrix", "spatstat_utils"] }, "spatstat_explore": { "name": "spatstat.explore", - "version": "3.2-7", - "sha256": "08740yclqv86mnds0a8xhn6r2qdqhw4qgkbrb2cl93crqwcdkr2f", - "depends": ["abind", "goftest", "Matrix", "nlme", "spatstat_data", "spatstat_geom", "spatstat_random", "spatstat_sparse", "spatstat_utils"] + "version": "3.3-1", + "sha256": "09if9x87g1zgcpqrg4ad4j6l0nd2yalpbbd3syxdvs4m671y7gyc", + "depends": ["Matrix", "abind", "goftest", "nlme", "spatstat_data", "spatstat_geom", "spatstat_random", "spatstat_sparse", "spatstat_univar", "spatstat_utils"] }, "spatstat_geom": { "name": "spatstat.geom", - "version": "3.2-9", - "sha256": "05ymr4h6g5kp6kinm8qi6mcwi51d2rp671cm3hqgyrhk91k72cx7", - "depends": ["deldir", "polyclip", "spatstat_data", "spatstat_utils"] + "version": "3.3-2", + "sha256": "03spxazgjspmsialvjy2sv5yxjh049dns4q4l4g0zgzd4ilqmh6b", + "depends": ["deldir", "polyclip", "spatstat_data", "spatstat_univar", "spatstat_utils"] }, "spatstat_gui": { "name": "spatstat.gui", - "version": "3.0-1", - "sha256": "1y6z3gdad0nhqg494b5pjq4h0mr3mcrhnnc0chy56lf8chb6p5jb", - "depends": ["rpanel", "spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_utils"] + "version": "3.1-0", + "sha256": "108ls75y8zhcygfra9zbd2c0gfpf6n0kl2d6jlixa712l3m6lx8l", + "depends": ["rpanel", "spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_univar", "spatstat_utils"] }, "spatstat_linnet": { "name": "spatstat.linnet", - "version": "3.1-5", - "sha256": "18zp6dsddc9js4ck6iqh5li4hw5qbyvh16vsa9vqk4ccgc1krl57", - "depends": ["Matrix", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_utils"] + "version": "3.2-1", + "sha256": "1gqivj8lsqn67068ygjqjjbnl2wywq3zp6mpqqbhyrbj7h3diw0s", + "depends": ["Matrix", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_univar", "spatstat_utils"] }, "spatstat_local": { "name": "spatstat.local", - "version": "5.0-1", - "sha256": "02ip6d2mr07n3lv4i5xdmb1j55syk5hwjwr7j81ibxkp3gj8gm61", - "depends": ["spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_utils", "tensor"] + "version": "5.1-0", + "sha256": "1brbk98hibsb7nh71xb3nhxsj8bb6lzclg746xd62cn9y72dl0v0", + "depends": ["spatstat", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_model", "spatstat_random", "spatstat_sparse", "spatstat_univar", "spatstat_utils", "tensor"] }, "spatstat_model": { "name": "spatstat.model", - "version": "3.2-11", - "sha256": "0hvnqig6cdrp8hk2fkcajag3hrqsamfr6h66wn4cs30iblic23bh", - "depends": ["abind", "goftest", "Matrix", "mgcv", "nlme", "rpart", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_sparse", "spatstat_utils", "tensor"] + "version": "3.3-1", + "sha256": "19xgc4hmcyhxdk4cw7k5qyffr48vyc9dj76k3blxzgrbbydrc72w", + "depends": ["Matrix", "abind", "goftest", "mgcv", "nlme", "rpart", "spatstat_data", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_sparse", "spatstat_univar", "spatstat_utils", "tensor"] }, "spatstat_random": { "name": "spatstat.random", - "version": "3.2-3", - "sha256": "19rl757lccr169fj00zmhb1a20bxw4kljzb81hbbr5xhj0za6lp0", - "depends": ["spatstat_data", "spatstat_geom", "spatstat_utils"] + "version": "3.3-1", + "sha256": "1lxvi1wkbv6z0hcargcjb5b79vvrhaf0y2psxlil9q82i376n0l3", + "depends": ["spatstat_data", "spatstat_geom", "spatstat_univar", "spatstat_utils"] }, "spatstat_sparse": { "name": "spatstat.sparse", - "version": "3.0-3", - "sha256": "0scdk3ns4nl1v1avbggnsinfpvl4i8391qy3x1iwxvkimr14xg3b", - "depends": ["abind", "Matrix", "spatstat_utils", "tensor"] + "version": "3.1-0", + "sha256": "1sdv9d3f5xc87qiwbfjikl12h2vkmdfq2faal5wbhfc3h72mvgk3", + "depends": ["Matrix", "abind", "spatstat_utils", "tensor"] }, "spatstat_univar": { "name": "spatstat.univar", - "version": "2.0-3", - "sha256": "0lsn7hjvrzfz0nzp601izm856ccm14zqwx8gpw84n772b9lmz4z8", + "version": "3.0-0", + "sha256": "0wa7zys089sym8f16rg4dih81miv34rj8mph0w926cpckcfm1g00", "depends": ["spatstat_utils"] }, "spatstat_utils": { "name": "spatstat.utils", - "version": "3.0-5", - "sha256": "15pm4fpc3fvqkh9kh4i0pgalxbxfp9y3blsyaw37s07v41gnd67b", + "version": "3.1-0", + "sha256": "0g9djqpn4yl9wcv3x1qb2pvjhq8491194a5lx6xg8180f1a32363", "depends": [] }, "spatsurv": { "name": "spatsurv", "version": "2.0-1", "sha256": "17s88w8ikrazhjbilvwcw1i1r9b77ci7f69jgr8lni7dd7l0b0hy", - "depends": ["fields", "iterators", "lubridate", "Matrix", "raster", "RColorBrewer", "sf", "sp", "spatstat_explore", "spatstat_geom", "spatstat_random", "stringr", "survival"] + "depends": ["Matrix", "RColorBrewer", "fields", "iterators", "lubridate", "raster", "sf", "sp", "spatstat_explore", "spatstat_geom", "spatstat_random", "stringr", "survival"] }, "spbabel": { "name": "spbabel", @@ -112725,8 +113883,8 @@ }, "spdesign": { "name": "spdesign", - "version": "0.0.3", - "sha256": "0gz7862pp18cliz8n6grjzjq0ldy5cxln16w1i18ifqpjdhss53s", + "version": "0.0.4", + "sha256": "0kc73mv7fpz0anzr9q2l5zd3g127igi5kbmfn0m19x3hpwh3qfyj", "depends": ["cli", "dplyr", "future", "matrixStats", "randtoolbox", "stringr", "tibble"] }, "spdl": { @@ -112745,7 +113903,7 @@ "name": "spduration", "version": "0.17.2", "sha256": "1cgrpfljb43qay38qjhb2xccawh8llrp545bm5bv29k7h1nsa9cb", - "depends": ["corpcor", "forecast", "MASS", "Rcpp", "RcppArmadillo", "separationplot", "xtable"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "corpcor", "forecast", "separationplot", "xtable"] }, "spdynmod": { "name": "spdynmod", @@ -112753,6 +113911,12 @@ "sha256": "1zbh1p3lmil4vsrw7q6af3p5xqvhw2k9hx59kbzabnzj4gy8wjk3", "depends": ["animation", "deSolve", "raster", "sp"] }, + "speakeasyR": { + "name": "speakeasyR", + "version": "0.1.2", + "sha256": "0idymzf2rh0vzgi3x84prqkkr6rjzf7whbj8ax11v141abwb7nlk", + "depends": ["Matrix"] + }, "speakr": { "name": "speakr", "version": "3.2.2", @@ -112763,13 +113927,13 @@ "name": "speaq", "version": "2.7.0", "sha256": "0z9a3nbfazphp090c6hg892vjq7jp4g4cij3s5wbs1q567inbmlk", - "depends": ["cluster", "data_table", "doSNOW", "foreach", "ggplot2", "gridExtra", "impute", "MassSpecWavelet", "missForest", "reshape2", "Rfast", "rvest", "xml2"] + "depends": ["MassSpecWavelet", "Rfast", "cluster", "data_table", "doSNOW", "foreach", "ggplot2", "gridExtra", "impute", "missForest", "reshape2", "rvest", "xml2"] }, "spearmanCI": { "name": "spearmanCI", "version": "1.1", "sha256": "0dn5gbyvw5rqqqbag16ljfwm4pc8mzyjq3fb49g7zq3c6l16wj27", - "depends": ["emplik", "MASS"] + "depends": ["MASS", "emplik"] }, "spec": { "name": "spec", @@ -112829,13 +113993,13 @@ "name": "spectral", "version": "2.0", "sha256": "116gn41nvlw7jmr6qx9pl8hckg2pzgzx49kql52j5xqf39sgyx9p", - "depends": ["lattice", "pbapply", "rasterImage", "RhpcBLASctl"] + "depends": ["RhpcBLASctl", "lattice", "pbapply", "rasterImage"] }, "spectralAnalysis": { "name": "spectralAnalysis", "version": "4.3.3", "sha256": "0b2f992p7vpzhzncrvpdkifbgymyiqxz66yk6md3j39wmx3ijkjw", - "depends": ["baseline", "BiocGenerics", "data_table", "dplyr", "ggplot2", "hNMF", "jsonlite", "magrittr", "NMF", "nnls", "plotly", "pls", "plyr", "RColorBrewer", "signal", "viridis", "zoo"] + "depends": ["BiocGenerics", "NMF", "RColorBrewer", "baseline", "data_table", "dplyr", "ggplot2", "hNMF", "jsonlite", "magrittr", "nnls", "plotly", "pls", "plyr", "signal", "viridis", "zoo"] }, "spectralGP": { "name": "spectralGP", @@ -112847,7 +114011,7 @@ "name": "spectralGraphTopology", "version": "0.2.3", "sha256": "09nsszm2f6q8kz84kn7ihhb627q186jwpvr6fm633l8app4ilf2x", - "depends": ["MASS", "Matrix", "progress", "Rcpp", "RcppArmadillo", "RcppEigen", "rlist"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "progress", "rlist"] }, "spectralR": { "name": "spectralR", @@ -112859,7 +114023,7 @@ "name": "spectre", "version": "1.0.2", "sha256": "1n5z7970pzhavdf7qhxsb7gzz8dsrwa1pwyxf8n6sxvmdbk8v2z1", - "depends": ["ggplot2", "Rcpp", "RcppProgress", "testthat"] + "depends": ["Rcpp", "RcppProgress", "ggplot2", "testthat"] }, "sped": { "name": "sped", @@ -112889,7 +114053,7 @@ "name": "speedglm", "version": "0.3-5", "sha256": "0jxvh9gbhip1hj7hzjs5fj8iw6ibvl6hc0llcg2j9wqgq5vkcrpq", - "depends": ["biglm", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "biglm"] }, "speedycode": { "name": "speedycode", @@ -112901,13 +114065,13 @@ "name": "speedytax", "version": "1.0.4", "sha256": "0iqgn0mxw5ygnnjz1sbmpz1wqcx1gx5xpncbl93ra8k7qmidw7gk", - "depends": ["dplyr", "phyloseq", "Rcpp", "stringr", "tibble", "tidyr"] + "depends": ["Rcpp", "dplyr", "phyloseq", "stringr", "tibble", "tidyr"] }, "spef": { "name": "spef", "version": "1.0.9", "sha256": "115lmv2a21ws1mj22v1fbk72mqn3siqmw3frbg4nci96lnyr7qh6", - "depends": ["BB", "ggplot2", "nleqslv", "plyr", "sm", "SQUAREM", "survival"] + "depends": ["BB", "SQUAREM", "ggplot2", "nleqslv", "plyr", "sm", "survival"] }, "speff2trial": { "name": "speff2trial", @@ -112943,7 +114107,7 @@ "name": "sperrorest", "version": "3.0.5", "sha256": "0hhigyv0p92gmxkchy4cim9mczsclahy5k6zkql5bjdky19zf72q", - "depends": ["dplyr", "future", "future_apply", "ROCR", "stringr"] + "depends": ["ROCR", "dplyr", "future", "future_apply", "stringr"] }, "spex": { "name": "spex", @@ -112985,7 +114149,7 @@ "name": "sphereTessellation", "version": "1.2.0", "sha256": "1b8wxbh44qd0rznjln3icp9k4jy598rva9kwcgzscpjm5j86r97w", - "depends": ["BH", "colorsGen", "Polychrome", "Rcpp", "RcppCGAL", "RcppEigen", "rgl"] + "depends": ["BH", "Polychrome", "Rcpp", "RcppCGAL", "RcppEigen", "colorsGen", "rgl"] }, "spherepc": { "name": "spherepc", @@ -113009,13 +114173,13 @@ "name": "sphet", "version": "2.0", "sha256": "1qr4n4kbmc58qmr8niqq3mnwv18x9q2f24c1kg67asf7n3pnmy77", - "depends": ["coda", "Matrix", "mvtnorm", "nlme", "sf", "sp", "spatialreg", "spData", "spdep", "stringr"] + "depends": ["Matrix", "coda", "mvtnorm", "nlme", "sf", "sp", "spData", "spatialreg", "spdep", "stringr"] }, "sphunif": { "name": "sphunif", "version": "1.4.0", "sha256": "125w91cz60j3lkx8dm74c8gh67k5j2k8mypx7rihym9rsdibdric", - "depends": ["doFuture", "doRNG", "foreach", "future", "gsl", "Rcpp", "RcppArmadillo", "rotasym"] + "depends": ["Rcpp", "RcppArmadillo", "doFuture", "doRNG", "foreach", "future", "gsl", "rotasym"] }, "spidR": { "name": "spidR", @@ -113039,7 +114203,7 @@ "name": "spikeSlabGAM", "version": "1.1-19", "sha256": "0qj16s4vmg058wzjd1bi1dc32kbj1gh56696hkqmpb87cgbwmff2", - "depends": ["cluster", "coda", "ggplot2", "gridExtra", "interp", "MASS", "MCMCpack", "mvtnorm", "R2WinBUGS", "reshape", "scales"] + "depends": ["MASS", "MCMCpack", "R2WinBUGS", "cluster", "coda", "ggplot2", "gridExtra", "interp", "mvtnorm", "reshape", "scales"] }, "spikes": { "name": "spikes", @@ -113057,19 +114221,19 @@ "name": "spinBayes", "version": "0.2.1", "sha256": "1p3gfxw1jnnj22s43facsna1ivazfj3x431f1ckv8qycdv61h31d", - "depends": ["ggplot2", "glmnet", "Rcpp", "RcppArmadillo", "testthat"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "glmnet", "testthat"] }, "spind": { "name": "spind", "version": "2.2.1", "sha256": "1yasqy086h4dv348krisc024mic0dvdsncqys95l85924djlfipp", - "depends": ["gee", "geepack", "ggplot2", "lattice", "MASS", "RColorBrewer", "rje", "rlang", "splancs", "stringr", "waveslim"] + "depends": ["MASS", "RColorBrewer", "gee", "geepack", "ggplot2", "lattice", "rje", "rlang", "splancs", "stringr", "waveslim"] }, "spinifex": { "name": "spinifex", "version": "0.3.7.0", "sha256": "1hw7kc4shmclx8i4794w8mlhl7awfrz0nr2k33nbk4pzdy0c02hk", - "depends": ["gganimate", "ggplot2", "magrittr", "plotly", "Rdimtools", "shiny", "tourr"] + "depends": ["Rdimtools", "gganimate", "ggplot2", "magrittr", "plotly", "shiny", "tourr"] }, "spinner": { "name": "spinner", @@ -113085,9 +114249,9 @@ }, "spiralize": { "name": "spiralize", - "version": "1.0.6", - "sha256": "10zz0f3z033pqi9rm3kgac85i5h8ngg2cx4dlr8z5y8v08dpln6b", - "depends": ["circlize", "GetoptLong", "GlobalOptions", "lubridate"] + "version": "1.1.0", + "sha256": "07ckzg2fhjjn5p1q7jpxlpj8ls5rzcafy3krjvr6a51hidlfan56", + "depends": ["ComplexHeatmap", "GetoptLong", "GlobalOptions", "circlize", "lubridate"] }, "spiritR": { "name": "spiritR", @@ -113117,12 +114281,12 @@ "name": "spldv", "version": "0.1.3", "sha256": "10bvx4z2b0kl2dl91dvr611cfp28dvch41vj9z1k1qlw03ybqpr8", - "depends": ["car", "Formula", "MASS", "Matrix", "maxLik", "memisc", "numDeriv", "spatialreg", "sphet"] + "depends": ["Formula", "MASS", "Matrix", "car", "maxLik", "memisc", "numDeriv", "spatialreg", "sphet"] }, "splines2": { "name": "splines2", - "version": "0.5.2", - "sha256": "1wvj57b92qpqnn4bmd5gbbnnds32s6bm04bq72c1q3fr069r9r8b", + "version": "0.5.3", + "sha256": "1p0xl3k33b539j6fifxaack956z3p4yfvhglcpvral315p8pnzn2", "depends": ["Rcpp", "RcppArmadillo"] }, "splinetree": { @@ -113153,7 +114317,7 @@ "name": "splithalf", "version": "0.8.2", "sha256": "0lq1a07kh2jdvg68p2jzhjcidwp6r83qbkggqdv0rmdj4x47lj5s", - "depends": ["dplyr", "ggplot2", "lme4", "patchwork", "plyr", "psych", "Rcpp", "robustbase", "tidyr"] + "depends": ["Rcpp", "dplyr", "ggplot2", "lme4", "patchwork", "plyr", "psych", "robustbase", "tidyr"] }, "splithalfr": { "name": "splithalfr", @@ -113171,13 +114335,13 @@ "name": "splm", "version": "1.6-5", "sha256": "0zwyl8pyx5ldr1rwqlkmzzbjc7r4dp261lsvw4b37ydm0sdhsizk", - "depends": ["bdsmatrix", "MASS", "Matrix", "maxLik", "nlme", "plm", "spam", "spatialreg", "spdep", "stringr"] + "depends": ["MASS", "Matrix", "bdsmatrix", "maxLik", "nlme", "plm", "spam", "spatialreg", "spdep", "stringr"] }, "splmm": { "name": "splmm", "version": "1.2.0", "sha256": "1qnzm1mnx5i0q1a5534s5n6fwgs95fdknc6k5s65z9jqd33n39c4", - "depends": ["emulator", "ggplot2", "gridExtra", "MASS", "miscTools", "penalized", "plot3D", "progress", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "emulator", "ggplot2", "gridExtra", "miscTools", "penalized", "plot3D", "progress"] }, "splot": { "name": "splot", @@ -113217,20 +114381,20 @@ }, "spmodel": { "name": "spmodel", - "version": "0.6.0", - "sha256": "0dllygmpc75s8cwxxgzy49a8098zb37k3xalk4l0n1ccfqxspf8b", - "depends": ["generics", "Matrix", "sf", "tibble"] + "version": "0.7.0", + "sha256": "099ki3j9zafxczx0bw6sc5gv1pzj6xc4vdxm34bh3h16bkwgxs0q", + "depends": ["Matrix", "generics", "sf", "tibble"] }, "spmoran": { "name": "spmoran", "version": "0.2.3", "sha256": "0gjniczvggcpgyriskcbry8hn5pbf4ga4nx6hj98kvy5qrv5dcnj", - "depends": ["doParallel", "fields", "FNN", "foreach", "ggplot2", "Matrix", "rARPACK", "RColorBrewer", "sf", "spdep", "vegan"] + "depends": ["FNN", "Matrix", "RColorBrewer", "doParallel", "fields", "foreach", "ggplot2", "rARPACK", "sf", "spdep", "vegan"] }, "spnaf": { "name": "spnaf", - "version": "1.0.0", - "sha256": "1xiky882smpyqscdwaqgjx505f5gwpl9i419n15j90lv4f768k6q", + "version": "1.1.0", + "sha256": "1l9p56f6yg10drag7mphk183kzz6s4b2ghfn3dlifgq76yqi7zfl", "depends": ["deldir", "dplyr", "magrittr", "rlang", "sf", "spdep", "tidyr"] }, "spnn": { @@ -113279,7 +114443,7 @@ "name": "sport", "version": "0.2.1", "sha256": "1vifh5x3rqnj0y7lzxhxa8jiiq9gza7r55kajcdib0hr65amwssk", - "depends": ["data_table", "ggplot2", "Rcpp"] + "depends": ["Rcpp", "data_table", "ggplot2"] }, "sportyR": { "name": "sportyR", @@ -113303,19 +114467,19 @@ "name": "spotoroo", "version": "0.1.4", "sha256": "004pjlad31xkxvl9bm4ga33ikmph93blb0qd1rpvs8s0lgi7v6pn", - "depends": ["cli", "dplyr", "geodist", "ggbeeswarm", "ggExtra", "ggplot2", "ggrepel", "patchwork", "progress"] + "depends": ["cli", "dplyr", "geodist", "ggExtra", "ggbeeswarm", "ggplot2", "ggrepel", "patchwork", "progress"] }, "spray": { "name": "spray", "version": "1.0-25", "sha256": "1mdnabkrj10r4bqll0qd2h7nqpmalbwfs8kzry1wxxy0j1886fv3", - "depends": ["disordR", "magic", "mathjaxr", "partitions", "Rcpp"] + "depends": ["Rcpp", "disordR", "magic", "mathjaxr", "partitions"] }, "spreadr": { "name": "spreadr", "version": "0.2.0", "sha256": "180dvr39i1glc0jllsnnglwrxh133q20v7px2fmdi7229pr175id", - "depends": ["assertthat", "extrafont", "ggplot2", "igraph", "Matrix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "assertthat", "extrafont", "ggplot2", "igraph"] }, "spreval": { "name": "spreval", @@ -113345,13 +114509,13 @@ "name": "sprintr", "version": "0.9.0", "sha256": "0nnzjn7zrcgcmk3rs0hn56jcjrzrn5z0kc77bv4zzvbz5vr8gbwj", - "depends": ["glmnet", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "glmnet"] }, "sprtt": { "name": "sprtt", "version": "0.2.0", "sha256": "0nllzisyf6ykamdi9y9hfscfa3hkmfaz7ddg9l25sqnawjvwrncr", - "depends": ["dplyr", "ggplot2", "glue", "lifecycle", "MBESS", "purrr"] + "depends": ["MBESS", "dplyr", "ggplot2", "glue", "lifecycle", "purrr"] }, "sps": { "name": "sps", @@ -113363,13 +114527,13 @@ "name": "spsComps", "version": "0.3.3.0", "sha256": "1yhd2iw9z614mcb2lnq43x5ixfpc5lbdm5avgawp726c3fvflky8", - "depends": ["assertthat", "crayon", "glue", "htmltools", "magrittr", "R6", "shiny", "shinyAce", "shinytoastr", "stringr"] + "depends": ["R6", "assertthat", "crayon", "glue", "htmltools", "magrittr", "shiny", "shinyAce", "shinytoastr", "stringr"] }, "spsUtil": { "name": "spsUtil", "version": "0.2.2", "sha256": "1hhiz2bmgrvpadag1d4ljynk7mhwknaslja9hcmf665l2x3hzdl6", - "depends": ["assertthat", "crayon", "glue", "httr", "magrittr", "R6", "stringr"] + "depends": ["R6", "assertthat", "crayon", "glue", "httr", "magrittr", "stringr"] }, "spselect": { "name": "spselect", @@ -113381,25 +114545,25 @@ "name": "spsh", "version": "1.1.0", "sha256": "1rmsgp0mrb4153v5f5xby7r3izvgz1a0vi63g5p9q5jd6z0gd2i1", - "depends": ["DEoptim", "FME", "hypergeo", "lhs", "pracma", "Rdpack"] + "depends": ["DEoptim", "FME", "Rdpack", "hypergeo", "lhs", "pracma"] }, "spsur": { "name": "spsur", "version": "1.0.2.5", "sha256": "0ar1b48r2hi50rvzkr432lpcc4c9r72hxkz74gip5gf12i7mx2ci", - "depends": ["Formula", "ggplot2", "gmodels", "gridExtra", "MASS", "Matrix", "minqa", "numDeriv", "Rdpack", "rlang", "sparseMVN", "spatialreg", "spdep", "sphet"] + "depends": ["Formula", "MASS", "Matrix", "Rdpack", "ggplot2", "gmodels", "gridExtra", "minqa", "numDeriv", "rlang", "sparseMVN", "spatialreg", "spdep", "sphet"] }, "spsurv": { "name": "spsurv", "version": "1.0.0", "sha256": "11jlbzvzxv3d1d0nwpbii46ddvphglrxv25rw7pvxbybcx2i7k6x", - "depends": ["BH", "coda", "loo", "MASS", "Rcpp", "RcppEigen", "rstan", "rstantools", "StanHeaders", "survival"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "StanHeaders", "coda", "loo", "rstan", "rstantools", "survival"] }, "spsurvey": { "name": "spsurvey", "version": "5.5.1", "sha256": "13h25mhb45s2k73a5709zlxfxylxqls0avan6d8pcp0iyrmpxjak", - "depends": ["boot", "crossdes", "deldir", "lme4", "MASS", "sampling", "sf", "survey", "units"] + "depends": ["MASS", "boot", "crossdes", "deldir", "lme4", "sampling", "sf", "survey", "units"] }, "spt": { "name": "spt", @@ -113417,7 +114581,7 @@ "name": "spuRs", "version": "2.0.2", "sha256": "00c0hnyrcbkbj269czxbfgmgi88y0vxzm79sxclllkzr9rdd1p53", - "depends": ["lattice", "MASS"] + "depends": ["MASS", "lattice"] }, "spup": { "name": "spup", @@ -113429,7 +114593,7 @@ "name": "sqlHelpers", "version": "0.1.2", "sha256": "1r46sak65ipfnflmd7w7ac6p62ihx7l9lpi8cjrx3c5xb6gaaxqx", - "depends": ["data_table", "DBI", "odbc", "stringi", "toolbox"] + "depends": ["DBI", "data_table", "odbc", "stringi", "toolbox"] }, "sqlcaser": { "name": "sqlcaser", @@ -113441,7 +114605,7 @@ "name": "sqldf", "version": "0.4-11", "sha256": "0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff", - "depends": ["chron", "DBI", "gsubfn", "proto", "RSQLite"] + "depends": ["DBI", "RSQLite", "chron", "gsubfn", "proto"] }, "sqlhelper": { "name": "sqlhelper", @@ -113453,13 +114617,13 @@ "name": "sqliter", "version": "0.1.0", "sha256": "17jjljq60szz0m8p2wc5l56659aap7an5gknc848dp89ycjgj3zx", - "depends": ["DBI", "functional", "RSQLite", "stringr"] + "depends": ["DBI", "RSQLite", "functional", "stringr"] }, "sqliteutils": { "name": "sqliteutils", "version": "0.1.0", "sha256": "0v7d52m9yvl5iadqnscgrcvniwhk7i7fmzd3gw23a0q4qxjs8iy9", - "depends": ["DBI", "dbplyr", "dplyr", "magrittr", "RSQLite"] + "depends": ["DBI", "RSQLite", "dbplyr", "dplyr", "magrittr"] }, "sqlparseR": { "name": "sqlparseR", @@ -113481,9 +114645,9 @@ }, "sqltargets": { "name": "sqltargets", - "version": "0.0.1", - "sha256": "1lf1p0lk3z8hmfpbzprjsp77m5dszgdwzq5vhrcrg5mbr2mkz697", - "depends": ["cli", "DBI", "fs", "glue", "purrr", "readr", "rlang", "RSQLite", "stringr", "tarchetypes", "targets", "withr"] + "version": "0.2.0", + "sha256": "08jwbpdzs686yx433l066qpyxb2c2nv0vpbhj5ybsm6x7q8nsb9a", + "depends": ["DBI", "cli", "fs", "glue", "jinjar", "purrr", "readr", "rlang", "stringr", "tarchetypes", "targets", "withr"] }, "squant": { "name": "squant", @@ -113501,25 +114665,25 @@ "name": "squat", "version": "0.3.0", "sha256": "0a5vm1ldwysadf50jvq7p988gv9arszg2a1hppcfjvwq193ywy0g", - "depends": ["cli", "dbscan", "dtw", "fdacluster", "funData", "furrr", "ggplot2", "ggrepel", "MFPCA", "progressr", "purrr", "Rcpp", "RcppArmadillo", "RcppEigen", "rlang", "roahd", "scales", "tibble", "tidyr"] + "depends": ["MFPCA", "Rcpp", "RcppArmadillo", "RcppEigen", "cli", "dbscan", "dtw", "fdacluster", "funData", "furrr", "ggplot2", "ggrepel", "progressr", "purrr", "rlang", "roahd", "scales", "tibble", "tidyr"] }, "squeezy": { "name": "squeezy", "version": "1.1-1", "sha256": "1dykp6hz056f9ajx1sg5bl89v4qmn41lsp9p9zzd9yib6d6ryfsm", - "depends": ["glmnet", "Matrix", "multiridge", "mvtnorm"] + "depends": ["Matrix", "glmnet", "multiridge", "mvtnorm"] }, "squid": { "name": "squid", "version": "0.2.1", "sha256": "1zpm787ifzrhww32ghi57ii37p9dssq7q7gbai9iqass78z90y2j", - "depends": ["arm", "brms", "data_table", "ggplot2", "lme4", "MASS", "plotly", "shiny", "shinyMatrix"] + "depends": ["MASS", "arm", "brms", "data_table", "ggplot2", "lme4", "plotly", "shiny", "shinyMatrix"] }, "sr": { "name": "sr", "version": "0.1.0", "sha256": "0d8c7gsr48xxg7y09n0namzqp148bk4idz51d2d5xlmlzcyq74k8", - "depends": ["dplyr", "ggplot2", "progress", "RANN", "vdiffr"] + "depends": ["RANN", "dplyr", "ggplot2", "progress", "vdiffr"] }, "sra": { "name": "sra", @@ -113539,17 +114703,23 @@ "sha256": "0hmlvq8rwhdv8hh7i517ml46p1hvd2idby4xx7firin8ca1829n5", "depends": ["DBI", "dplyr", "jsonlite"] }, + "sreg": { + "name": "sreg", + "version": "1.0.0", + "sha256": "05rvx5frd9c7qz00wjk8qirsnj1hmqlpvmzvf6lwbhbx2abwzd1j", + "depends": ["cli", "dplyr", "extraDistr", "rlang", "tidyr"] + }, "sregsurvey": { "name": "sregsurvey", "version": "0.1.3", "sha256": "1wpqsjhj4vl8gzma4i9y75srzwl8zmkj55lmrhni7xar4d81mnb4", - "depends": ["caret", "dplyr", "gamlss", "gamlss_dist", "magrittr", "TeachingSampling"] + "depends": ["TeachingSampling", "caret", "dplyr", "gamlss", "gamlss_dist", "magrittr"] }, "srlTS": { "name": "srlTS", "version": "0.1.1", "sha256": "1alqywbp36adgnak1s78mcwfg0gcg90a9412nypylsk6bfa7wgsv", - "depends": ["dplyr", "ncvreg", "RcppRoll", "rlang", "yardstick"] + "depends": ["RcppRoll", "dplyr", "ncvreg", "rlang", "yardstick"] }, "srlars": { "name": "srlars", @@ -113597,19 +114767,19 @@ "name": "ssMousetrack", "version": "1.1.6", "sha256": "014b1ylynn3l3k24p4zr001ys32ajrxxdpk3jwl0lmfm7r63as58", - "depends": ["BH", "CircStats", "cowplot", "dtw", "ggplot2", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "CircStats", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cowplot", "dtw", "ggplot2", "rstan", "rstantools"] }, "ssMutPA": { "name": "ssMutPA", "version": "0.1.0", "sha256": "15nrv2yzs5ydzm7030cznyqxdisg68hld28z3060bvq4ad3a9wvq", - "depends": ["ggplot2", "ggridges", "igraph", "kernlab", "maftools", "Matrix", "NbClust", "pheatmap", "RColorBrewer", "survival"] + "depends": ["Matrix", "NbClust", "RColorBrewer", "ggplot2", "ggridges", "igraph", "kernlab", "maftools", "pheatmap", "survival"] }, "ssaBSS": { "name": "ssaBSS", "version": "0.1.1", "sha256": "1sfhrp5y4hhnc417jq2vyk935iyicl58jbw4nwrj3rayh0ng7dbp", - "depends": ["BSSprep", "ggplot2", "ICtest", "JADE", "tsBSS", "xts", "zoo"] + "depends": ["BSSprep", "ICtest", "JADE", "ggplot2", "tsBSS", "xts", "zoo"] }, "ssanv": { "name": "ssanv", @@ -113635,17 +114805,23 @@ "sha256": "1266wn3vwlajr57sdjqk5zylnm7vcss37r4qwa02iv9d98qmwmrw", "depends": ["actuar", "config", "fitdistrplus", "ggplot2", "golem", "htmltools", "htmlwidgets", "jsonlite", "rhandsontable", "rlang", "rmarkdown", "shiny", "shinybusy", "shinyjs"] }, + "ssdGSA": { + "name": "ssdGSA", + "version": "0.1.1", + "sha256": "1167vfacvhkc9p7pv30snj24jz2x09fpfvad5qb3brw7lkr0japs", + "depends": ["GSVA", "clusterProfiler", "dplyr", "org_Hs_eg_db", "purrr", "stringr", "tibble", "tidyselect", "vctrs"] + }, "ssddata": { "name": "ssddata", "version": "1.0.0", "sha256": "0njcnjcgdghwrbjcbiq4yfn7nq9h4dvylrqh57c6vx35yqc4g375", - "depends": ["chk", "dplyr", "Rdpack"] + "depends": ["Rdpack", "chk", "dplyr"] }, "ssdtools": { "name": "ssdtools", "version": "1.0.6", "sha256": "13pyl9cscs6zsbfjg2x7gfk568mnrnhv7n5fkl0r47r6x94vbr0s", - "depends": ["abind", "chk", "doFuture", "foreach", "furrr", "generics", "ggplot2", "goftest", "lifecycle", "plyr", "purrr", "Rcpp", "RcppEigen", "scales", "ssddata", "stringr", "tibble", "TMB", "universals", "VGAM"] + "depends": ["Rcpp", "RcppEigen", "TMB", "VGAM", "abind", "chk", "doFuture", "foreach", "furrr", "generics", "ggplot2", "goftest", "lifecycle", "plyr", "purrr", "scales", "ssddata", "stringr", "tibble", "universals"] }, "sse": { "name": "sse", @@ -113679,21 +114855,21 @@ }, "ssh": { "name": "ssh", - "version": "0.9.1", - "sha256": "1jb9mvy16zj7g62n1b4j1jfydvs526zn372knm8yy1x1zpljwn6h", + "version": "0.9.2", + "sha256": "06lalzlh0kis4jlhlgyqbq5xzqy0dr8b4nh5z50qjks9jzai7qyv", "depends": ["askpass", "credentials"] }, "sship": { "name": "sship", "version": "0.9.0", "sha256": "0h0cbbvqfmik2z0qp34gym81p01x01yndymczb8vpqnj0nfnmyhc", - "depends": ["httr", "jsonlite", "openssl", "RCurl", "yaml"] + "depends": ["RCurl", "httr", "jsonlite", "openssl", "yaml"] }, "ssifs": { "name": "ssifs", "version": "1.0.2", "sha256": "17q1p4cgdwmn3vlhkc4p49j1222wd8d6dcp7n5ngvqcfjn3lrarh", - "depends": ["ggplot2", "gtools", "igraph", "netmeta", "plyr", "R2jags", "Rdpack", "RevEcoR"] + "depends": ["R2jags", "Rdpack", "RevEcoR", "ggplot2", "gtools", "igraph", "netmeta", "plyr"] }, "ssimparser": { "name": "ssimparser", @@ -113711,7 +114887,7 @@ "name": "ssizeRNA", "version": "1.3.2", "sha256": "1qw10yswzpg28fhvr6rsq0gh7xivfapw64gxc0hakb1nc31jf8ky", - "depends": ["Biobase", "edgeR", "limma", "MASS", "qvalue", "ssize_fdr"] + "depends": ["Biobase", "MASS", "edgeR", "limma", "qvalue", "ssize_fdr"] }, "ssmn": { "name": "ssmn", @@ -113723,7 +114899,7 @@ "name": "ssmodels", "version": "1.0.1", "sha256": "19w3vr4zz23xbb4mr4zwqwj024i10hgnpm0cf47qh5c1zkjcwdib", - "depends": ["miscTools", "numDeriv", "pracma", "Rdpack", "sn"] + "depends": ["Rdpack", "miscTools", "numDeriv", "pracma", "sn"] }, "ssmrob": { "name": "ssmrob", @@ -113741,7 +114917,7 @@ "name": "sspse", "version": "1.1.0-1", "sha256": "0dy78fkazjm6ai2smxfkkhfzgbqk4sxvq7yhj89zdnk1vp1p1fy7", - "depends": ["coda", "KernSmooth", "RDS", "scam"] + "depends": ["KernSmooth", "RDS", "coda", "scam"] }, "ssr": { "name": "ssr", @@ -113771,13 +114947,13 @@ "name": "sssc", "version": "1.0.0", "sha256": "00m5zfd3jnbxa8x76v4pfyl4qdfq90n8rqx4hngany0ka1z5g7m6", - "depends": ["changepoint", "e1071", "ggplot2", "VGAM"] + "depends": ["VGAM", "changepoint", "e1071", "ggplot2"] }, "sstvars": { "name": "sstvars", "version": "1.0.1", "sha256": "16ans039cx5kj0l1l8108jfplgz4mq5bbqhixks2dqmlsn5qn34m", - "depends": ["pbapply", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "pbapply"] }, "ssym": { "name": "ssym", @@ -113793,33 +114969,33 @@ }, "stR": { "name": "stR", - "version": "0.6", - "sha256": "1gh26yhcpkiif6zyrrg0rw4118xcf7j1d1wf70wgyrwb1hrr6vcv", - "depends": ["foreach", "forecast", "Matrix", "quantreg", "SparseM"] + "version": "0.7", + "sha256": "1ihhz62ajkiq4d5s9zvqfp2h4k7hwgynfdy7walrhpxlcb9pjgay", + "depends": ["Matrix", "SparseM", "foreach", "forecast", "quantreg"] }, "stRoke": { "name": "stRoke", "version": "23.9.1", "sha256": "0rlhi8cj1gb5cpvpds4hr6m1g4g53yqlzrvl5gzn3xkiyd5i3kx3", - "depends": ["calendar", "dplyr", "ggplot2", "gtsummary", "lubridate", "MASS", "rankinPlot", "tidyr"] + "depends": ["MASS", "calendar", "dplyr", "ggplot2", "gtsummary", "lubridate", "rankinPlot", "tidyr"] }, "sta": { "name": "sta", "version": "0.1.7", "sha256": "00kv2gd0ar2j992cn7j516y3w9nx83ylxp35xrqg2n43z4kgsacs", - "depends": ["doParallel", "foreach", "geoTS", "mapview", "raster", "RColorBrewer", "trend"] + "depends": ["RColorBrewer", "doParallel", "foreach", "geoTS", "mapview", "raster", "trend"] }, "staRdom": { "name": "staRdom", "version": "1.1.28", "sha256": "1nihk9fyng0skzi2g0rgl85c3ka92bmr1jaiq4l9mi81g823bk3b", - "depends": ["cdom", "data_table", "doParallel", "dplyr", "drc", "eemR", "foreach", "GGally", "ggplot2", "gtools", "matrixStats", "MBA", "multiway", "pracma", "R_matlab", "readr", "stringr", "tibble", "tidyr", "viridisLite", "zoo"] + "depends": ["GGally", "MBA", "R_matlab", "cdom", "data_table", "doParallel", "dplyr", "drc", "eemR", "foreach", "ggplot2", "gtools", "matrixStats", "multiway", "pracma", "readr", "stringr", "tibble", "tidyr", "viridisLite", "zoo"] }, "stabiliser": { "name": "stabiliser", "version": "1.0.6", "sha256": "1zyqmj8s8x0h8dji50r3yhn3n3838vci81gm02p971px8x5wq9y8", - "depends": ["bigstep", "broom", "caret", "dplyr", "expss", "ggplot2", "glmnet", "Hmisc", "knitr", "lme4", "lmerTest", "matrixStats", "ncvreg", "purrr", "recipes", "rsample", "stringr", "tibble", "tidyr"] + "depends": ["Hmisc", "bigstep", "broom", "caret", "dplyr", "expss", "ggplot2", "glmnet", "knitr", "lme4", "lmerTest", "matrixStats", "ncvreg", "purrr", "recipes", "rsample", "stringr", "tibble", "tidyr"] }, "stability": { "name": "stability", @@ -113847,27 +115023,27 @@ }, "stabledist": { "name": "stabledist", - "version": "0.7-1", - "sha256": "0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86", + "version": "0.7-2", + "sha256": "1mbgl6an18dzry55pvy08zdhj1gar5mlyvkfnlawiqyqq081frr6", "depends": [] }, "stablelearner": { "name": "stablelearner", "version": "0.1-5", "sha256": "0a1fsy9hf63c1yfp4dallfsiknzsnhjl91yzqsgvni3gyx0vjykm", - "depends": ["e1071", "MASS", "party", "partykit", "randomForest", "ranger"] + "depends": ["MASS", "e1071", "party", "partykit", "randomForest", "ranger"] }, "stablespec": { "name": "stablespec", "version": "0.3.0", "sha256": "0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22", - "depends": ["foreach", "ggm", "graph", "matrixcalc", "nsga2R", "polycor", "Rgraphviz", "sem"] + "depends": ["Rgraphviz", "foreach", "ggm", "graph", "matrixcalc", "nsga2R", "polycor", "sem"] }, "stabm": { "name": "stabm", "version": "1.2.2", "sha256": "1vslidq2pzpwhsrsklghaqsdjjf4w4wqs2dng0p68zhrv5vlivhq", - "depends": ["checkmate", "Matrix"] + "depends": ["Matrix", "checkmate"] }, "stabreg": { "name": "stabreg", @@ -113895,27 +115071,27 @@ }, "stacks": { "name": "stacks", - "version": "1.0.4", - "sha256": "1i28m6jxg83h3as74ax39frdwbzwnsq20vb18shswc62azrimw9q", + "version": "1.0.5", + "sha256": "1bhfdnyf4w5r5bmfnrcwwy9h6qdimklbcr0b50vwmkj4jcyin48a", "depends": ["butcher", "cli", "doFuture", "dplyr", "foreach", "future", "generics", "ggplot2", "glmnet", "glue", "parsnip", "purrr", "recipes", "rlang", "rsample", "tibble", "tidyr", "tune", "vctrs", "workflows"] }, "stacomiR": { "name": "stacomiR", "version": "0.6.1", "sha256": "0ik0804j8fvqmpj0xyzmjdsykw3672a5vyb4dhiss7dc1g4la20f", - "depends": ["DBI", "dplyr", "ggplot2", "Hmisc", "intervals", "lattice", "lubridate", "magrittr", "mgcv", "pool", "RColorBrewer", "reshape2", "rlang", "RPostgres", "scales", "stacomirtools", "stringr", "withr", "xtable"] + "depends": ["DBI", "Hmisc", "RColorBrewer", "RPostgres", "dplyr", "ggplot2", "intervals", "lattice", "lubridate", "magrittr", "mgcv", "pool", "reshape2", "rlang", "scales", "stacomirtools", "stringr", "withr", "xtable"] }, "stacomirtools": { "name": "stacomirtools", "version": "0.6.0.1", "sha256": "1hw1k0mjddw46j3aagry2mx43wak03kkx4zzxplgcafwks5bp82y", - "depends": ["DBI", "pool", "RODBC", "RPostgres", "xtable"] + "depends": ["DBI", "RODBC", "RPostgres", "pool", "xtable"] }, "stagePop": { "name": "stagePop", "version": "1.1-2", "sha256": "0yaxdq0p47qkjwjrsj4vb8rif9ip2k0vjnvz1k87h1mcslkfzygs", - "depends": ["deSolve", "PBSddesolve"] + "depends": ["PBSddesolve", "deSolve"] }, "stagedtrees": { "name": "stagedtrees", @@ -113927,7 +115103,7 @@ "name": "staggered", "version": "1.1", "sha256": "0z9358qbgn637j8iz5qwr4nyrlvi9w85l325vxpc61mcwksx5ip8", - "depends": ["coop", "dplyr", "magrittr", "MASS", "purrr", "Rcpp", "RcppEigen", "reshape2", "tidyr"] + "depends": ["MASS", "Rcpp", "RcppEigen", "coop", "dplyr", "magrittr", "purrr", "reshape2", "tidyr"] }, "stampr": { "name": "stampr", @@ -113939,13 +115115,13 @@ "name": "stan4bart", "version": "0.0-8", "sha256": "1i0asl380p38ksi59wmyi23jwq05mm9kxymphyqjniq68i0lban4", - "depends": ["BH", "dbarts", "Matrix", "Rcpp", "RcppEigen", "RcppParallel"] + "depends": ["BH", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "dbarts"] }, "standardize": { "name": "standardize", "version": "0.2.2", "sha256": "008nz9vf08qxwdsn373yzpmsw5lhbm6mpm6dlwyys58wq0bdvh28", - "depends": ["lme4", "MASS", "stringr"] + "depends": ["MASS", "lme4", "stringr"] }, "standardlastprofile": { "name": "standardlastprofile", @@ -113969,13 +115145,13 @@ "name": "stapler", "version": "0.7.1", "sha256": "1bzhahn72fzm2bjpis76hphv8whnkp2jq8bm1qldadhng4z1nsak", - "depends": ["matrixStats", "RNifti"] + "depends": ["RNifti", "matrixStats"] }, "staplr": { "name": "staplr", "version": "3.2.2", "sha256": "1wqknnrbcwcmw0kvyydwrgs0yz5cixpgxglva377lzqlbw8ll7wn", - "depends": ["assertthat", "fs", "glue", "pdftools", "purrr", "rJava", "stringr", "XML"] + "depends": ["XML", "assertthat", "fs", "glue", "pdftools", "purrr", "rJava", "stringr"] }, "stargazer": { "name": "stargazer", @@ -113993,24 +115169,24 @@ "name": "starma", "version": "1.3", "sha256": "07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx", - "depends": ["ggplot2", "Rcpp", "RcppArmadillo", "scales"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "scales"] }, "starnet": { "name": "starnet", "version": "0.0.6", "sha256": "0gbg8svyj4nh846q7986ap7jjry599kb1348k9lifz19kvyr4rn4", - "depends": ["cornet", "glmnet", "Matrix", "survival"] + "depends": ["Matrix", "cornet", "glmnet", "survival"] }, "starry": { "name": "starry", "version": "0.1.2", "sha256": "18dn18y5vs4fhj3jzm2zmvyx2wqakkrkppmggizz60vrarnaqp8i", - "depends": ["bslib", "car", "corrr", "dplyr", "ggplot2", "magrittr", "shiny", "shinyjs", "shinyWidgets", "stringr"] + "depends": ["bslib", "car", "corrr", "dplyr", "ggplot2", "magrittr", "shiny", "shinyWidgets", "shinyjs", "stringr"] }, "stars": { "name": "stars", - "version": "0.6-5", - "sha256": "1b5gs0qa8097f2mvz4rgl46wrvk1rbbbi2a4s901hdg4bkr15jsg", + "version": "0.6-6", + "sha256": "1b679s25f9vpzrisyxs5xzc0dv47yn3prm0hi752fhpvml4kbjkh", "depends": ["abind", "classInt", "rlang", "sf", "units"] }, "starsExtra": { @@ -114023,7 +115199,7 @@ "name": "starsTileServer", "version": "0.1.1", "sha256": "04z3xaijhgn5g10vvx19lya6v17ypcq00w4jlgkap3fafw61pqhn", - "depends": ["assertthat", "leaflet", "plumber", "png", "R6", "rlang", "sf", "stars", "units"] + "depends": ["R6", "assertthat", "leaflet", "plumber", "png", "rlang", "sf", "stars", "units"] }, "starschemar": { "name": "starschemar", @@ -114035,18 +115211,18 @@ "name": "startR", "version": "2.3.1", "sha256": "03wdaqiyrjhihsnw33z87baplv854znh4l7ww4ywmp17hl6hr7l8", - "depends": ["abind", "bigmemory", "ClimProjDiags", "easyNCDF", "future", "multiApply", "PCICt", "s2dv"] + "depends": ["ClimProjDiags", "PCICt", "abind", "bigmemory", "easyNCDF", "future", "multiApply", "s2dv"] }, "starter": { "name": "starter", "version": "0.1.15", "sha256": "0lzaiw4m6wxniv8bgri33z8np49mqbgip4jhibsw0xa717anlqa4", - "depends": ["cli", "dplyr", "gert", "glue", "R_utils", "renv", "rlang", "rprojroot", "rstudioapi"] + "depends": ["R_utils", "cli", "dplyr", "gert", "glue", "renv", "rlang", "rprojroot", "rstudioapi"] }, "startup": { "name": "startup", - "version": "0.21.0", - "sha256": "0iwq1nbiv2j78g17mq566qqv5p5msk1gmi0bb0hs1j1xx9vjamnl", + "version": "0.22.0", + "sha256": "04hifi5cck1vzhacmy9kg7k1f278lvvsrj6p0d1n61fiiv3fqscm", "depends": [] }, "startupmsg": { @@ -114059,13 +115235,13 @@ "name": "starvars", "version": "1.1.10", "sha256": "1mq31g05ahpsmda2zrmkg1dlaqqk4c9hm9fjzhgrsxlg4j3klbbf", - "depends": ["doSNOW", "foreach", "ks", "lessR", "MASS", "matrixcalc", "optimParallel", "quantmod", "vars", "xts", "zoo"] + "depends": ["MASS", "doSNOW", "foreach", "ks", "lessR", "matrixcalc", "optimParallel", "quantmod", "vars", "xts", "zoo"] }, "starvz": { "name": "starvz", "version": "0.8.0", "sha256": "0slym8xwvihbslxm4llbzb8fybjbk040lbzng4fh5dsw58zf04r1", - "depends": ["BH", "data_tree", "dplyr", "ggplot2", "gtools", "lpSolve", "magrittr", "patchwork", "purrr", "RColorBrewer", "Rcpp", "readr", "rlang", "stringr", "tibble", "tidyr", "yaml", "zoo"] + "depends": ["BH", "RColorBrewer", "Rcpp", "data_tree", "dplyr", "ggplot2", "gtools", "lpSolve", "magrittr", "patchwork", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr", "yaml", "zoo"] }, "starwarsdb": { "name": "starwarsdb", @@ -114075,8 +115251,8 @@ }, "statBasics": { "name": "statBasics", - "version": "0.2.0", - "sha256": "1yphfzwj8hmqsz1qfckb05xxjyyi9r6g6iqcl8n20bs5hgr3d2s9", + "version": "0.2.2", + "sha256": "1hhwg2190bndjgmxmv37ihqdg665s9zn1h1smwshs59wk0r7bzjx", "depends": ["stringr", "tibble"] }, "statConfR": { @@ -114087,15 +115263,15 @@ }, "statGraph": { "name": "statGraph", - "version": "1.0.1", - "sha256": "0jqb8bp0szzp67n52y0wsxpb0amb3sy00l25l933pxgfcj5hpdnz", - "depends": ["cluster", "doParallel", "foreach", "igraph", "MASS", "rARPACK"] + "version": "1.0.3", + "sha256": "0rwmn6mhvvahzdqhp58v3icas4mlr73jizmb7lv8dzgxvq8dz0i0", + "depends": ["MASS", "cluster", "doParallel", "foreach", "igraph", "mvtnorm", "rARPACK"] }, "statVisual": { "name": "statVisual", "version": "1.2.1", "sha256": "1cc9p9g8lzn0lgh793r977yhqbk89l74m443gnznjlfml69bfb21", - "depends": ["Biobase", "dplyr", "factoextra", "forestplot", "gbm", "GGally", "ggdendro", "ggfortify", "ggplot2", "ggrepel", "glmnet", "gridExtra", "knitr", "limma", "magrittr", "pheatmap", "pROC", "pvca", "randomForest", "RColorBrewer", "reshape2", "rmarkdown", "rpart_plot", "tibble", "tidyverse"] + "depends": ["Biobase", "GGally", "RColorBrewer", "dplyr", "factoextra", "forestplot", "gbm", "ggdendro", "ggfortify", "ggplot2", "ggrepel", "glmnet", "gridExtra", "knitr", "limma", "magrittr", "pROC", "pheatmap", "pvca", "randomForest", "reshape2", "rmarkdown", "rpart_plot", "tibble", "tidyverse"] }, "statar": { "name": "statar", @@ -114107,7 +115283,7 @@ "name": "statcanR", "version": "0.2.6", "sha256": "1hnf3zjlpfp86lii9sz8m2dvzbj9bs320ffdr81q2jsla71xybaa", - "depends": ["curl", "data_table", "dplyr", "DT", "ggplot2", "httr", "qpdf", "qs", "readr", "reshape2", "tibble"] + "depends": ["DT", "curl", "data_table", "dplyr", "ggplot2", "httr", "qpdf", "qs", "readr", "reshape2", "tibble"] }, "statcheck": { "name": "statcheck", @@ -114149,7 +115325,7 @@ "name": "statgenGWAS", "version": "1.0.9", "sha256": "0isjzb83vwml654b1azgvnwiijpihdk24b3jamls976is359qvrv", - "depends": ["data_table", "ggplot2", "Rcpp", "RcppArmadillo", "sommer"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "ggplot2", "sommer"] }, "statgenGxE": { "name": "statgenGxE", @@ -114161,31 +115337,31 @@ "name": "statgenHTP", "version": "1.0.6.1", "sha256": "1lhs72y9p98vas7iv1zgqb9zac6plzgv5lffccyg75r88784xn1s", - "depends": ["animation", "factoextra", "ggforce", "ggnewscale", "ggplot2", "gridExtra", "LMMsolver", "locfit", "lubridate", "Matrix", "reshape2", "rlang", "scales", "spam", "SpATS"] + "depends": ["LMMsolver", "Matrix", "SpATS", "animation", "factoextra", "ggforce", "ggnewscale", "ggplot2", "gridExtra", "locfit", "lubridate", "reshape2", "rlang", "scales", "spam"] }, "statgenIBD": { "name": "statgenIBD", "version": "1.0.7", "sha256": "1dw0riwycd59hcidnxczy61xib8if8m2hv6dni2qd6n2i99vfbpc", - "depends": ["data_table", "ggplot2", "Matrix", "Rcpp", "RcppArmadillo", "rlang", "statgenGWAS", "stringi"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "data_table", "ggplot2", "rlang", "statgenGWAS", "stringi"] }, "statgenMPP": { "name": "statgenMPP", "version": "1.0.2", "sha256": "1qpf9gic9671hr6zyj56sqwx9wl51qr6gj84rfssdla718h766im", - "depends": ["data_table", "foreach", "ggplot2", "gridExtra", "LMMsolver", "Matrix", "scales", "spam", "statgenGWAS", "statgenIBD", "stringi"] + "depends": ["LMMsolver", "Matrix", "data_table", "foreach", "ggplot2", "gridExtra", "scales", "spam", "statgenGWAS", "statgenIBD", "stringi"] }, "statgenQTLxT": { "name": "statgenQTLxT", "version": "1.0.2", "sha256": "1lq8v49zf9l6gaifdwc0qpx8kknnhqw2jg19v2vr7da1xqd7wfdi", - "depends": ["data_table", "foreach", "Rcpp", "RcppArmadillo", "sommer", "statgenGWAS"] + "depends": ["Rcpp", "RcppArmadillo", "data_table", "foreach", "sommer", "statgenGWAS"] }, "statgenSTA": { "name": "statgenSTA", "version": "1.0.13", "sha256": "1pnb13psnyqj4mjry6g78pjc4qz642wjnxi9ki8i4h73i335ixxv", - "depends": ["emmeans", "ggplot2", "ggrepel", "gridExtra", "knitr", "lme4", "mapproj", "maps", "qtl", "rlang", "scales", "SpATS", "xtable"] + "depends": ["SpATS", "emmeans", "ggplot2", "ggrepel", "gridExtra", "knitr", "lme4", "mapproj", "maps", "qtl", "rlang", "scales", "xtable"] }, "stationaRy": { "name": "stationaRy", @@ -114231,9 +115407,9 @@ }, "statnetWeb": { "name": "statnetWeb", - "version": "0.5.6", - "sha256": "1haf2kr1mwvaz4hlwla2ysbcy3sbfcg3i4hyiy9y6lcffvy4w9w0", - "depends": ["ergm", "lattice", "latticeExtra", "network", "RColorBrewer", "shiny", "sna"] + "version": "0.5.8", + "sha256": "12qwx0gnrmb449rz5a2qhds6rparfpw8ak4n0cxk9dmy6d47903l", + "depends": ["RColorBrewer", "ergm", "lattice", "latticeExtra", "network", "shiny", "sna"] }, "statnipokladna": { "name": "statnipokladna", @@ -114249,9 +115425,9 @@ }, "statpsych": { "name": "statpsych", - "version": "1.5.0", - "sha256": "0sgdz97svj2krg6576pc74jiqpws4qjvvk351d88av3cc9s3g9y8", - "depends": ["mathjaxr", "mnonr", "Rdpack"] + "version": "1.6.0", + "sha256": "1kxgwzg6qwkrlih0rwllmm31c9yyxp6w051wslb4q695piq4las2", + "depends": ["Rdpack", "mathjaxr", "mnonr"] }, "statquotes": { "name": "statquotes", @@ -114261,21 +115437,21 @@ }, "stats19": { "name": "stats19", - "version": "3.0.3", - "sha256": "001bmwkr07lv0r02i5glssqw2kf6b6n8m3bwgz3rpljqz07y0j80", + "version": "3.1.0", + "sha256": "1af7a2p1n1rxgx25qpkw27qmhy0gyiq2549vibdp8gfdybsf38g6", "depends": ["readr", "sf"] }, "stats4teaching": { "name": "stats4teaching", "version": "0.1.0", "sha256": "1i2v97k6c75096hp23zpffmdbajdzzkqp508p9dvw841vpx2wxdn", - "depends": ["asbio", "car", "clusterGeneration", "knitr", "MASS", "MVN", "nortest", "psych", "pwr", "rstatix"] + "depends": ["MASS", "MVN", "asbio", "car", "clusterGeneration", "knitr", "nortest", "psych", "pwr", "rstatix"] }, "statsExpressions": { "name": "statsExpressions", - "version": "1.5.4", - "sha256": "061qrhibfanh4f38pyhlj2z364y75d4njvrlr2415bww4jcwlpfd", - "depends": ["afex", "BayesFactor", "correlation", "datawizard", "dplyr", "effectsize", "glue", "insight", "magrittr", "parameters", "performance", "PMCMRplus", "purrr", "rlang", "tibble", "tidyr", "withr", "WRS2", "zeallot"] + "version": "1.5.5", + "sha256": "0ba594rvqgczb10ldkmc637z9v6c0j3qixa1pw7jzd2bmhqfmaxh", + "depends": ["BayesFactor", "PMCMRplus", "WRS2", "afex", "correlation", "datawizard", "dplyr", "effectsize", "glue", "insight", "magrittr", "parameters", "performance", "purrr", "rlang", "tibble", "tidyr", "withr", "zeallot"] }, "statsearchanalyticsr": { "name": "statsearchanalyticsr", @@ -114305,7 +115481,7 @@ "name": "stcos", "version": "0.3.1", "sha256": "146s0jdd88pax9xsn2z56x8sfkjx8yr8sf59ma9zryq42ajyq43d", - "depends": ["dplyr", "Matrix", "Rcpp", "RcppArmadillo", "sf"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr", "sf"] }, "stcov": { "name": "stcov", @@ -114347,7 +115523,7 @@ "name": "steadyICA", "version": "1.0", "sha256": "0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g", - "depends": ["clue", "combinat", "MASS", "Rcpp"] + "depends": ["MASS", "Rcpp", "clue", "combinat"] }, "steepness": { "name": "steepness", @@ -114359,7 +115535,7 @@ "name": "stelfi", "version": "1.0.1", "sha256": "06sj1az5803xh1ikkawdrp0c8yc1kh8iqky6vazxr516hc3b0f9w", - "depends": ["dplyr", "fmesher", "ggplot2", "gridExtra", "Matrix", "RcppEigen", "sf", "TMB"] + "depends": ["Matrix", "RcppEigen", "TMB", "dplyr", "fmesher", "ggplot2", "gridExtra", "sf"] }, "stellaR": { "name": "stellaR", @@ -114377,7 +115553,7 @@ "name": "stenR", "version": "0.6.9", "sha256": "19vn7123wys1jqrm4y8f6b4kvwygi1ql6ady2d5jz93vf29ihdzj", - "depends": ["cli", "data_table", "dplyr", "moments", "R6", "rlang"] + "depends": ["R6", "cli", "data_table", "dplyr", "moments", "rlang"] }, "stencilaschema": { "name": "stencilaschema", @@ -114401,13 +115577,13 @@ "name": "stepR", "version": "2.1-9", "sha256": "1dw402p49j2m076b7ybmnfhxhxb4i8fnalqqblxq2ax7rl69i2vz", - "depends": ["digest", "lowpassFilter", "R_cache", "Rcpp"] + "depends": ["R_cache", "Rcpp", "digest", "lowpassFilter"] }, "stepSplitReg": { "name": "stepSplitReg", "version": "1.0.3", "sha256": "04ks599bb3rbyc81kyakj6nmj7i8fvkb1pild0gd3i6j84j70071", - "depends": ["nnls", "Rcpp", "RcppArmadillo", "SplitGLM"] + "depends": ["Rcpp", "RcppArmadillo", "SplitGLM", "nnls"] }, "stepdownfdp": { "name": "stepdownfdp", @@ -114449,7 +115625,7 @@ "name": "steps", "version": "1.3.0", "sha256": "0yvqz5jhzwqkm3gphb2mmlq1ip6sr8g6c09hirs827j12dj63ixf", - "depends": ["future", "future_apply", "memuse", "raster", "rasterVis", "Rcpp", "viridisLite"] + "depends": ["Rcpp", "future", "future_apply", "memuse", "raster", "rasterVis", "viridisLite"] }, "stevedata": { "name": "stevedata", @@ -114485,7 +115661,13 @@ "name": "stfit", "version": "0.99.9", "sha256": "0668nnsgkdd2v7bx06wnq8sc0asbi19p4752jm0hj2jziiibk0kn", - "depends": ["abind", "doParallel", "fda", "foreach", "Matrix", "raster", "rasterVis", "RColorBrewer", "Rcpp"] + "depends": ["Matrix", "RColorBrewer", "Rcpp", "abind", "doParallel", "fda", "foreach", "raster", "rasterVis"] + }, + "stgam": { + "name": "stgam", + "version": "0.0.1.2", + "sha256": "0p6w0yb0cyc4zpsb7nwkxh8s7vlssprb5ssg0rfbmh83n37faqb4", + "depends": ["cowplot", "doParallel", "dplyr", "foreach", "ggplot2", "glue", "magrittr", "metR", "mgcv", "tidyselect"] }, "sticky": { "name": "sticky", @@ -114509,7 +115691,7 @@ "name": "stim", "version": "1.0.0", "sha256": "0a2lcyhh12jzg2znyc648vs8pl19098wz3z60kgd5r9jns707ca4", - "depends": ["lavaan", "Ryacas"] + "depends": ["Ryacas", "lavaan"] }, "stima": { "name": "stima", @@ -114551,19 +115733,19 @@ "name": "stlplus", "version": "0.5.1", "sha256": "14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5", - "depends": ["lattice", "Rcpp", "yaImpute"] + "depends": ["Rcpp", "lattice", "yaImpute"] }, "stm": { "name": "stm", "version": "1.3.7", "sha256": "0cvv6q5r55iqk327rav25dymvnn77rj8chmgkbkwd0c1dpqf4x5q", - "depends": ["data_table", "glmnet", "lda", "Matrix", "matrixStats", "quadprog", "quanteda", "Rcpp", "RcppArmadillo", "slam", "stringr"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "data_table", "glmnet", "lda", "matrixStats", "quadprog", "quanteda", "slam", "stringr"] }, "stmCorrViz": { "name": "stmCorrViz", "version": "1.3", "sha256": "1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv", - "depends": ["jsonlite", "SnowballC", "stm", "tm"] + "depends": ["SnowballC", "jsonlite", "stm", "tm"] }, "stmgp": { "name": "stmgp", @@ -114577,17 +115759,23 @@ "sha256": "1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c", "depends": ["markdown", "shiny", "shinyBS", "shinyjs", "shinythemes", "stm", "tm"] }, + "stminsights": { + "name": "stminsights", + "version": "0.4.3", + "sha256": "1yx87ia1i0p7cavxikz4dvy2j0ymnqpwqmdhci5x7yzsb0arl4kf", + "depends": ["DT", "dplyr", "ggplot2", "ggraph", "ggrepel", "huge", "igraph", "purrr", "readr", "scales", "shiny", "shinyBS", "shinydashboard", "shinyjs", "stm", "stringr", "tibble", "tidygraph"] + }, "stoRy": { "name": "stoRy", "version": "0.2.2", "sha256": "05lji6gl8nzkxhygfvfm7alk5yp5gw1dkkr5r993vnj67m10pcbq", - "depends": ["cli", "crayon", "dplyr", "fansi", "httr", "lifecycle", "purrr", "R6", "rappdirs", "readr", "rlang", "stringr", "tibble", "tidyjson", "tidyr"] + "depends": ["R6", "cli", "crayon", "dplyr", "fansi", "httr", "lifecycle", "purrr", "rappdirs", "readr", "rlang", "stringr", "tibble", "tidyjson", "tidyr"] }, "stocc": { "name": "stocc", "version": "1.31", "sha256": "0d0n9nrcva0vradippq30y6dc6klwd1mllnzpnzq9rczpz5cw7mw", - "depends": ["coda", "fields", "Matrix", "rARPACK", "truncnorm"] + "depends": ["Matrix", "coda", "fields", "rARPACK", "truncnorm"] }, "stochLAB": { "name": "stochLAB", @@ -114605,13 +115793,13 @@ "name": "stochvol", "version": "3.2.4", "sha256": "1cr8rn4nzdbvgjhsahyijn2kgbndiyvycbn6rjxc0x5prc99j52w", - "depends": ["coda", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda"] }, "stochvolTMB": { "name": "stochvolTMB", "version": "0.2.0", "sha256": "07m3qz8j1sw37lrxzmbkbifd3nsdvd2blbca8vr1aq5bbafr1g1b", - "depends": ["data_table", "ggplot2", "MASS", "RcppEigen", "sn", "TMB"] + "depends": ["MASS", "RcppEigen", "TMB", "data_table", "ggplot2", "sn"] }, "stockAnalyst": { "name": "stockAnalyst", @@ -114623,13 +115811,13 @@ "name": "stockR", "version": "1.0.76", "sha256": "1n1xnz97x82bc9n930cwm11sl8r40224psya5z29a2zp449a5540", - "depends": ["gtools", "RColorBrewer", "Rcpp"] + "depends": ["RColorBrewer", "Rcpp", "gtools"] }, "stocks": { "name": "stocks", "version": "1.1.4", "sha256": "0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6", - "depends": ["dvmisc", "Hmisc", "lubridate", "quantmod", "rbenchmark", "RColorBrewer", "Rcpp", "TTR", "zoo"] + "depends": ["Hmisc", "RColorBrewer", "Rcpp", "TTR", "dvmisc", "lubridate", "quantmod", "rbenchmark", "zoo"] }, "stodom": { "name": "stodom", @@ -114659,7 +115847,7 @@ "name": "stopp", "version": "0.2.4", "sha256": "09cvh2h8c91zb8iak7g4j0sznv8kxbn0r2xjl36p663mqk2lb5ss", - "depends": ["fields", "KernSmooth", "MASS", "mgcv", "optimx", "plot3D", "sparr", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_univar", "spatstat_utils", "splancs", "stlnpp", "stpp"] + "depends": ["KernSmooth", "MASS", "fields", "mgcv", "optimx", "plot3D", "sparr", "spatstat_explore", "spatstat_geom", "spatstat_linnet", "spatstat_model", "spatstat_random", "spatstat_univar", "spatstat_utils", "splancs", "stlnpp", "stpp"] }, "stoppingrule": { "name": "stoppingrule", @@ -114669,9 +115857,9 @@ }, "stops": { "name": "stops", - "version": "1.0-1", - "sha256": "12zc338wh78an1nsmqr7sbfcr96yrb6xqzg9miwlb58sv28hm8i3", - "depends": ["acepack", "clue", "cmaes", "cordillera", "dfoptim", "DiceKriging", "DiceOptim", "energy", "MASS", "minerva", "nloptr", "pomp", "pso", "rgl", "scagnostics", "scatterplot3d", "smacof", "tgp", "vegan"] + "version": "1.6-2", + "sha256": "1fn1xbxq1ls5xw38hnv0kh5gx9pd4myspkj146q6w83yzzrwjnry", + "depends": ["DiceKriging", "DiceOptim", "acepack", "clue", "cmaes", "cordillera", "dfoptim", "energy", "minerva", "nloptr", "pomp", "pso", "scagnostics", "smacof", "smacofx", "tgp", "vegan"] }, "stopwords": { "name": "stopwords", @@ -114683,7 +115871,7 @@ "name": "storr", "version": "1.2.5", "sha256": "0qszdq16bf0dbss33zi63ciwmkgjsyc0c3akrr2kl14w3ncw6922", - "depends": ["digest", "R6"] + "depends": ["R6", "digest"] }, "stortingscrape": { "name": "stortingscrape", @@ -114707,31 +115895,31 @@ "name": "stplanr", "version": "1.2.1", "sha256": "08hhx6lagfwy153xwbpqbvsz13dfq29607bp2640c5bfmddgnaxp", - "depends": ["curl", "data_table", "dplyr", "geosphere", "httr", "jsonlite", "lwgeom", "magrittr", "nabor", "od", "pbapply", "Rcpp", "rlang", "sf", "sfheaders"] + "depends": ["Rcpp", "curl", "data_table", "dplyr", "geosphere", "httr", "jsonlite", "lwgeom", "magrittr", "nabor", "od", "pbapply", "rlang", "sf", "sfheaders"] }, "stpm": { "name": "stpm", "version": "1.7.12", "sha256": "16kp69356bj1s26iwwysxdyr87kd3jqhj2gmmz4vc003ai63ga6y", - "depends": ["MASS", "nloptr", "Rcpp", "RcppArmadillo", "sas7bdat", "survival"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "nloptr", "sas7bdat", "survival"] }, "stpp": { "name": "stpp", - "version": "2.0-7", - "sha256": "1w9jn71ha817gldfhkmr2vfx3nkr78g1y662rfxg6flx2wyxs3kq", - "depends": ["ggplot2", "gridExtra", "KernSmooth", "plot3D", "rgl", "rpanel", "spatstat_explore", "spatstat_geom", "spatstat_random", "splancs"] + "version": "2.0-8", + "sha256": "1xb80nbfx7f1frzcw61fr2vnb8br8355f7aaifrjfz6vclf2ax1z", + "depends": ["KernSmooth", "ggplot2", "gridExtra", "plot3D", "rgl", "rpanel", "spatstat_explore", "spatstat_geom", "spatstat_random", "spatstat_univar", "splancs"] }, "stppSim": { "name": "stppSim", - "version": "1.3.2", - "sha256": "00wxbahfamxf4y2fmscq48n5j81qx4xsnh8har2mhhnqvaiikbvz", - "depends": ["chron", "cowplot", "data_table", "dplyr", "future_apply", "geosphere", "ggplot2", "gstat", "ks", "leaflet", "lubridate", "magrittr", "otuSummary", "progressr", "raster", "sf", "SiMRiv", "sp", "sparr", "spatstat_geom", "splancs", "stringr", "terra", "tibble", "tidyr"] + "version": "1.3.4", + "sha256": "0rrridj6r354lz3fbpyzhbvbb72cif0yxmd7d5ghbv2ig9dwz310", + "depends": ["SiMRiv", "chron", "cowplot", "data_table", "dplyr", "future_apply", "geosphere", "ggplot2", "gstat", "ks", "leaflet", "lubridate", "magrittr", "otuSummary", "progressr", "raster", "sf", "sp", "sparr", "spatstat_geom", "splancs", "stringr", "terra", "tibble", "tidyr"] }, "stpphawkes": { "name": "stpphawkes", "version": "0.2.1", "sha256": "1mfhvfjlshhigyl5bfagjiv3q8dizqf89ikyifkchylni5szblbs", - "depends": ["extraDistr", "interp", "Rcpp", "RcppArmadillo", "RcppGSL", "RcppProgress"] + "depends": ["Rcpp", "RcppArmadillo", "RcppGSL", "RcppProgress", "extraDistr", "interp"] }, "str2str": { "name": "str2str", @@ -114743,7 +115931,7 @@ "name": "strand", "version": "0.2.0", "sha256": "0gd9nnbdilvk4bszg77bxilan6qpg1np7c38w1b7j5sr3r30y5in", - "depends": ["arrow", "dplyr", "ggplot2", "lubridate", "Matrix", "R6", "Rglpk", "rlang", "tibble", "tidyr", "yaml"] + "depends": ["Matrix", "R6", "Rglpk", "arrow", "dplyr", "ggplot2", "lubridate", "rlang", "tibble", "tidyr", "yaml"] }, "stranslate": { "name": "stranslate", @@ -114785,7 +115973,7 @@ "name": "stratamatch", "version": "0.1.9", "sha256": "1z395355kac0wd4f0m1ijh851m046ra8h1wam04if4qp00ychajp", - "depends": ["dplyr", "Hmisc", "magrittr", "rlang", "survival"] + "depends": ["Hmisc", "dplyr", "magrittr", "rlang", "survival"] }, "stratastats": { "name": "stratastats", @@ -114831,27 +116019,21 @@ }, "strawr": { "name": "strawr", - "version": "0.0.91", - "sha256": "1nbcn20g3f3f5x9sscj3020n5h4iaphr70s90n2fz31vc4snzq2m", + "version": "0.0.92", + "sha256": "0dy6pagwvmswmrlvb9ndy8lz3krcm8fqik83l0gmv9wjb9vba27s", "depends": ["Rcpp"] }, "stray": { "name": "stray", "version": "0.1.1", "sha256": "1pjw1bdkqsp085lrwca1psma95ncapfz8a5iampxgghydkhh3dm8", - "depends": ["colorspace", "FNN", "ggplot2", "ks", "pcaPP"] + "depends": ["FNN", "colorspace", "ggplot2", "ks", "pcaPP"] }, "stream": { "name": "stream", "version": "2.0-2", "sha256": "0qpn6rf0rp1nklarw0jkdlvpalcnvvjs26h8slnqkgrkb1rr0vhc", - "depends": ["BH", "clue", "cluster", "clusterGeneration", "dbscan", "fpc", "magrittr", "MASS", "mlbench", "proxy", "Rcpp", "rpart"] - }, - "streamConnect": { - "name": "streamConnect", - "version": "0.0-4", - "sha256": "0sg28i9p6frlccabq9cq2j4w47jgcknwpjhpwl32qrwll7q9k4r3", - "depends": ["callr", "httr", "jsonlite", "plumber", "readr", "stream", "stringr"] + "depends": ["BH", "MASS", "Rcpp", "clue", "cluster", "clusterGeneration", "dbscan", "fpc", "magrittr", "mlbench", "proxy", "rpart"] }, "streamDAG": { "name": "streamDAG", @@ -114863,7 +116045,7 @@ "name": "streamDepletr", "version": "0.2.0", "sha256": "0pa0hsnhscsa98xkqzg7l83yagzq1r6m250m3m4r79baab8ndqp4", - "depends": ["dplyr", "Rmpfr", "sf"] + "depends": ["Rmpfr", "dplyr", "sf"] }, "streamMOA": { "name": "streamMOA", @@ -114875,7 +116057,7 @@ "name": "streamR", "version": "0.4.5", "sha256": "1clx3b0j2515r1nmnl6ki7qw5n54q3x2jvqv3zrc00kq71mlj7ix", - "depends": ["ndjson", "RCurl", "rjson"] + "depends": ["RCurl", "ndjson", "rjson"] }, "streambugs": { "name": "streambugs", @@ -114887,7 +116069,7 @@ "name": "streetscape", "version": "1.0.2", "sha256": "0y06719766yh6ifbk1h7wgdsw3asnwagli50czwqyilcp8p0fc4z", - "depends": ["dplyr", "httr", "mapview", "OpenImageR", "osmdata", "parallelly", "pbmcapply", "quickPWCR", "reticulate", "rlang", "sf", "sp", "SuperpixelImageSegmentation"] + "depends": ["OpenImageR", "SuperpixelImageSegmentation", "dplyr", "httr", "mapview", "osmdata", "parallelly", "pbmcapply", "quickPWCR", "reticulate", "rlang", "sf", "sp"] }, "stressaddition": { "name": "stressaddition", @@ -114905,7 +116087,7 @@ "name": "stressr", "version": "1.0.0", "sha256": "00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7", - "depends": ["lattice", "latticeExtra", "XML", "xts"] + "depends": ["XML", "lattice", "latticeExtra", "xts"] }, "strex": { "name": "strex", @@ -114989,7 +116171,7 @@ "name": "striprtf", "version": "0.6.0", "sha256": "1c8z2qf1kp43ir4dmyxq6hc46dclq8vx3ggkj02p8j1icjswm9bh", - "depends": ["magrittr", "Rcpp", "stringr"] + "depends": ["Rcpp", "magrittr", "stringr"] }, "strucchange": { "name": "strucchange", @@ -115013,7 +116195,7 @@ "name": "strvalidator", "version": "2.4.1", "sha256": "0s7n26in5fb6lxgffx01743vd4854qg4wclqgsa6mwnrqg8ihg4y", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "gridExtra", "gtable", "gWidgets2", "gWidgets2tcltk", "MASS", "plotly", "plyr", "scales"] + "depends": ["DT", "MASS", "data_table", "dplyr", "gWidgets2", "gWidgets2tcltk", "ggplot2", "gridExtra", "gtable", "plotly", "plyr", "scales"] }, "stuart": { "name": "stuart", @@ -115025,25 +116207,25 @@ "name": "studentlife", "version": "1.1.0", "sha256": "1xvlcwg7ckxsm5hb5ax8r3hzdqnx61ax59ini5xc5jrsmir13g67", - "depends": ["crayon", "dplyr", "ggplot2", "jsonlite", "purrr", "R_utils", "readr", "skimr", "tibble", "tidyr", "visdat"] + "depends": ["R_utils", "crayon", "dplyr", "ggplot2", "jsonlite", "purrr", "readr", "skimr", "tibble", "tidyr", "visdat"] }, "studyStrap": { "name": "studyStrap", "version": "1.0.0", "sha256": "0lvzqnq40j0xn74qrj0pqhr8zz34mbhfd7dg8bnadscsvj5ffm4c", - "depends": ["caret", "CCA", "dplyr", "MatrixCorrelation", "nnls", "pls", "tibble", "tidyverse"] + "depends": ["CCA", "MatrixCorrelation", "caret", "dplyr", "nnls", "pls", "tibble", "tidyverse"] }, "stxplore": { "name": "stxplore", "version": "0.1.0", "sha256": "1bnpp53s7r8ghvbxvnlk103h66a55xf7y9fcdhvmfgf31d2x5dsd", - "depends": ["fields", "ggmap", "ggplot2", "ggridges", "gridExtra", "gstat", "lubridate", "magrittr", "RColorBrewer", "rlang", "sp", "spacetime", "stars", "tidyr"] + "depends": ["RColorBrewer", "fields", "ggmap", "ggplot2", "ggridges", "gridExtra", "gstat", "lubridate", "magrittr", "rlang", "sp", "spacetime", "stars", "tidyr"] }, "styler": { "name": "styler", "version": "1.10.3", "sha256": "0hfspw1q40jqla238dw86iyf0lyk1agc19flwvf9nrm824hw5fdd", - "depends": ["cli", "magrittr", "purrr", "R_cache", "rlang", "rprojroot", "vctrs", "withr"] + "depends": ["R_cache", "cli", "magrittr", "purrr", "rlang", "rprojroot", "vctrs", "withr"] }, "stylest2": { "name": "stylest2", @@ -115101,8 +116283,8 @@ }, "subplex": { "name": "subplex", - "version": "1.8", - "sha256": "19g5bd39gmcn27xdsklkzxg99x1r5v5q8zcw1iwry31qj24ivhrv", + "version": "1.9", + "sha256": "1dv9bpwm7ml662yrc2jnrjf4f8n1g5rfiipq6z0fx9j6pa6fma87", "depends": [] }, "subrank": { @@ -115115,19 +116297,13 @@ "name": "subscore", "version": "3.3", "sha256": "01y7bp7nj0p47n69pxvj2gyrcvgj617ymhwhxlqp0jrkns1wqjy5", - "depends": ["boot", "cocor", "CTT", "irtoys", "ltm", "sirt"] + "depends": ["CTT", "boot", "cocor", "irtoys", "ltm", "sirt"] }, "subscreen": { "name": "subscreen", "version": "3.0.7", "sha256": "0vxwyx08bjha7vgv3lcgigar43f74fr3w7wna6z8viawh3bc7k96", - "depends": ["bsplus", "colourpicker", "data_table", "dplyr", "DT", "jsonlite", "plyr", "purrr", "ranger", "shiny", "shinyjs", "shinyWidgets"] - }, - "subselect": { - "name": "subselect", - "version": "0.15.5", - "sha256": "1xw8ya8kq1b7vn7rp976b3i4bsxvnw53xw34bhsq6xk2c9idk3pw", - "depends": ["corpcor", "ISwR", "MASS"] + "depends": ["DT", "bsplus", "colourpicker", "data_table", "dplyr", "jsonlite", "plyr", "purrr", "ranger", "shiny", "shinyWidgets", "shinyjs"] }, "subsemble": { "name": "subsemble", @@ -115143,9 +116319,9 @@ }, "success": { "name": "success", - "version": "1.0.1", - "sha256": "0imwba2p50da9ymyj1pkg2dbn1ramzahabdnic0k0dmcn9g74d64", - "depends": ["ggplot2", "ggrepel", "Matrix", "matrixcalc", "pbapply", "plotly", "Rfast", "survival"] + "version": "1.1.0", + "sha256": "14y6farbnjxd0jq3g4vzj6y1xivcibgfic3w4s2jir1wq10ixf5x", + "depends": ["Matrix", "Rfast", "ggplot2", "ggrepel", "matrixcalc", "pbapply", "plotly", "survival"] }, "sudachir": { "name": "sudachir", @@ -115211,7 +116387,7 @@ "name": "sumSome", "version": "1.1.0", "sha256": "1a70kxvp9d9hn38jnvgk934vwbz4bjb6k4kcngp6rp9gv9h2bh2r", - "depends": ["ARIbrain", "pARI", "Rcpp", "RNifti"] + "depends": ["ARIbrain", "RNifti", "Rcpp", "pARI"] }, "summariser": { "name": "summariser", @@ -115229,7 +116405,7 @@ "name": "summclust", "version": "0.7.2", "sha256": "1cdzv5bm3l8fnnpk0c94y32ss1pmx7dddks33ha9r2yqw7p9xwvq", - "depends": ["cli", "collapse", "dreamerr", "generics", "MASS", "rlang"] + "depends": ["MASS", "cli", "collapse", "dreamerr", "generics", "rlang"] }, "sunburstR": { "name": "sunburstR", @@ -115243,18 +116419,18 @@ "sha256": "1xkci2sbcf5x1wn2jqzbfzc5dly331dhihrxjlmdiic247blwqyp", "depends": ["data_table", "lubridate", "magrittr"] }, + "sundialr": { + "name": "sundialr", + "version": "0.1.4.2", + "sha256": "1qzak0zrdj2ygw4h6cn28z6q5qxaam8dybqblmf17xq2lkvn2bpn", + "depends": ["Rcpp", "RcppArmadillo"] + }, "suntools": { "name": "suntools", "version": "1.0.0", "sha256": "1qlp0q2ckqg5v3yvbr98k3nr9awgg7ks0l1103nqvm1ssadv7ds2", "depends": ["sf"] }, - "supc": { - "name": "supc", - "version": "0.2.6.2", - "sha256": "0gvrmhvjkfbgi0ivwa8ri69rxj4kqn3xqrc2d5rfrdfm9jmqb56h", - "depends": ["BH", "Rcpp"] - }, "supclust": { "name": "supclust", "version": "1.1-1", @@ -115265,19 +116441,19 @@ "name": "superMICE", "version": "1.1.1", "sha256": "0wf043vyd89a5jdvm128rqmfrnm9c0lhir35jyzy20rm75aqqh1w", - "depends": ["mice", "SuperLearner"] + "depends": ["SuperLearner", "mice"] }, "superb": { "name": "superb", - "version": "0.95.9", - "sha256": "1amqfmkn7zfpsmq1r7xdc8x4kpshpjd54jpdwbbwj0mw8qzs2g7n", - "depends": ["foreign", "ggplot2", "lsr", "MASS", "plyr", "Rdpack", "shiny", "shinyBS", "stringr"] + "version": "0.95.15", + "sha256": "1lirfmsrkbssfg0kwlfw67g8hi4j2g71c7q177hvahpw90ajr6gf", + "depends": ["MASS", "Rdpack", "foreign", "ggplot2", "lsr", "plyr", "shiny", "shinyBS", "stringr"] }, "superbiclust": { "name": "superbiclust", "version": "1.2", "sha256": "0mk3d820skp99hl8ilwic2fz90yb9dwy2jq3vfjb726gj1qich3b", - "depends": ["biclust", "fabia", "Matrix"] + "depends": ["Matrix", "biclust", "fabia"] }, "supercells": { "name": "supercells", @@ -115307,7 +116483,7 @@ "name": "superml", "version": "0.5.7", "sha256": "0r2xp520j8w395b272681g9d7vzinmf4cl627xxcsw8575k89lpf", - "depends": ["assertthat", "BH", "data_table", "Metrics", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Metrics", "R6", "Rcpp", "RcppArmadillo", "assertthat", "data_table"] }, "supernova": { "name": "supernova", @@ -115385,19 +116561,19 @@ "name": "sureLDA", "version": "0.1.0-1", "sha256": "09ls5gv9jip2pw38qw3v2ag91fgmmkq989pyr8c8j92nbwk6i3hr", - "depends": ["doParallel", "foreach", "glmnet", "MAP", "Matrix", "pROC", "Rcpp", "RcppArmadillo"] + "depends": ["MAP", "Matrix", "Rcpp", "RcppArmadillo", "doParallel", "foreach", "glmnet", "pROC"] }, "surface": { "name": "surface", "version": "0.5", "sha256": "1fw75543aa6yafldffh9cnpm6m0rif0fpcihwj56d7nfnkbslawz", - "depends": ["ape", "geiger", "MASS", "ouch"] + "depends": ["MASS", "ape", "geiger", "ouch"] }, "surrosurv": { "name": "surrosurv", "version": "1.1.26", "sha256": "1zkrbc71n06i0fccrv5f15rnkbp3cb8lnizh4z16mmqgvn35hg1j", - "depends": ["copula", "eha", "lme4", "MASS", "Matrix", "msm", "mvmeta", "optimx", "parfm", "survival"] + "depends": ["MASS", "Matrix", "copula", "eha", "lme4", "msm", "mvmeta", "optimx", "parfm", "survival"] }, "surrosurvROC": { "name": "surrosurvROC", @@ -115409,7 +116585,7 @@ "name": "surtvep", "version": "1.0.0", "sha256": "0mmpyjv8cyayqpkkr7lh31s7bascv6i3h3774sfc015lzjpwl22f", - "depends": ["ggplot2", "ggpubr", "Rcpp", "RcppArmadillo", "rlang", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "ggpubr", "rlang", "tibble"] }, "surv2sampleComp": { "name": "surv2sampleComp", @@ -115481,7 +116657,7 @@ "name": "survMisc", "version": "0.5.6", "sha256": "014cf7sfndmib9jmj0p3h67sr750k2pvw7m865zwdpvlqddi44fr", - "depends": ["data_table", "ggplot2", "gridExtra", "km_ci", "KMsurv", "knitr", "survival", "xtable", "zoo"] + "depends": ["KMsurv", "data_table", "ggplot2", "gridExtra", "km_ci", "knitr", "survival", "xtable", "zoo"] }, "survParamSim": { "name": "survParamSim", @@ -115523,7 +116699,7 @@ "name": "survSNP", "version": "0.26", "sha256": "0fvmqlzg6j43d5bwvn70n4630n396wrykl5blkszadj3l118rmp4", - "depends": ["foreach", "lattice", "Rcpp", "survival", "xtable"] + "depends": ["Rcpp", "foreach", "lattice", "survival", "xtable"] }, "survSens": { "name": "survSens", @@ -115545,15 +116721,15 @@ }, "surveil": { "name": "surveil", - "version": "0.2.2", - "sha256": "1bk048mjnviwrls2s25wqrrm3iwi6qjkjlhnpb0i7wjm9cckzz7j", - "depends": ["BH", "dplyr", "ggdist", "ggplot2", "gridExtra", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "scales", "StanHeaders", "tidybayes", "tidyr"] + "version": "0.3.0", + "sha256": "18q7i3pi5b4nx24zfkcswvdivqa7s0zri1gfimygyaz4mdpza1y1", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "ggdist", "ggplot2", "gridExtra", "rlang", "rstan", "rstantools", "scales", "tidybayes", "tidyr"] }, "surveillance": { "name": "surveillance", "version": "1.23.0", "sha256": "1xqcm71mfmk3x8kq9sb66a4654c1vblpjz4may4xn7yh62nbcy2n", - "depends": ["MASS", "Matrix", "nlme", "polyCub", "Rcpp", "sp", "spatstat_geom", "xtable"] + "depends": ["MASS", "Matrix", "Rcpp", "nlme", "polyCub", "sp", "spatstat_geom", "xtable"] }, "survex": { "name": "survex", @@ -115565,13 +116741,13 @@ "name": "survexp.fr", "version": "1.1", "sha256": "0ci65w3w06kwab98q9gb7nb7smq9r25qfibkgfilsg1i5li6p9h5", - "depends": ["survival", "WriteXLS"] + "depends": ["WriteXLS", "survival"] }, "survey": { "name": "survey", "version": "4.4-2", "sha256": "1ggisal5g16p3n03bch7ymawd4hig3fmm02nhxy1z5zh48qhyjla", - "depends": ["lattice", "Matrix", "minqa", "mitools", "numDeriv", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "lattice", "minqa", "mitools", "numDeriv", "survival"] }, "surveyCV": { "name": "surveyCV", @@ -115583,19 +116759,19 @@ "name": "surveyPrev", "version": "1.0.0", "sha256": "1vp4v27vj9w0vsab6jjy9hvx36lrn01qkx3d0idmx0zwbd0bxy50", - "depends": ["data_table", "dplyr", "ggplot2", "labelled", "matrixStats", "naniar", "raster", "rdhs", "sf", "sjlabelled", "sp", "spdep", "stringr", "SUMMER", "survey", "tidyverse"] + "depends": ["SUMMER", "data_table", "dplyr", "ggplot2", "labelled", "matrixStats", "naniar", "raster", "rdhs", "sf", "sjlabelled", "sp", "spdep", "stringr", "survey", "tidyverse"] }, "surveybootstrap": { "name": "surveybootstrap", "version": "0.0.3", "sha256": "1ci6gqs1kiizpmddkw9r5nsq9wqdhha3kxhnn6b28fczrsypilf8", - "depends": ["dplyr", "functional", "plyr", "purrr", "Rcpp", "RcppArmadillo", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "functional", "plyr", "purrr", "stringr"] }, "surveydata": { "name": "surveydata", "version": "0.2.7", "sha256": "0wrp92j50a19is4xvh5s82zkp3rvn46gi2344pxinppfax0kjf2h", - "depends": ["assertthat", "dplyr", "DT", "ggplot2", "magrittr", "purrr", "rlang", "scales", "tidyr"] + "depends": ["DT", "assertthat", "dplyr", "ggplot2", "magrittr", "purrr", "rlang", "scales", "tidyr"] }, "surveyexplorer": { "name": "surveyexplorer", @@ -115619,7 +116795,7 @@ "name": "surveysd", "version": "1.3.1", "sha256": "16l17ying9xshfn563kp7nn3hdqrg03ny578sgi08b7zfds5yf8b", - "depends": ["data_table", "ggplot2", "laeken", "Rcpp"] + "depends": ["Rcpp", "data_table", "ggplot2", "laeken"] }, "surveytable": { "name": "surveytable", @@ -115631,13 +116807,13 @@ "name": "surveyvoi", "version": "1.0.6", "sha256": "0lkws90jlvr4l40l8h7fkck0skpf9yp4989a3bsqvm670l8qvc1w", - "depends": ["assertthat", "doParallel", "dplyr", "groupdata2", "Matrix", "nloptr", "plyr", "PoissonBinomial", "progress", "Rcpp", "RcppAlgos", "RcppEigen", "Rsymphony", "scales", "sf", "tibble", "vegan", "withr", "xgboost"] + "depends": ["Matrix", "PoissonBinomial", "Rcpp", "RcppAlgos", "RcppEigen", "Rsymphony", "assertthat", "doParallel", "dplyr", "groupdata2", "nloptr", "plyr", "progress", "scales", "sf", "tibble", "vegan", "withr", "xgboost"] }, "survidm": { "name": "survidm", "version": "1.3.2", "sha256": "0ass7ffpk70ph7dcdjm2f6xyzqaavlkhr1pcij2vcasiy4v1vyiv", - "depends": ["doParallel", "doRNG", "foreach", "ggplot2", "gridExtra", "KernSmooth", "np", "plotly", "Rcpp", "survival", "TPmsm"] + "depends": ["KernSmooth", "Rcpp", "TPmsm", "doParallel", "doRNG", "foreach", "ggplot2", "gridExtra", "np", "plotly", "survival"] }, "survival": { "name": "survival", @@ -115649,7 +116825,7 @@ "name": "survival.svb", "version": "0.0-2", "sha256": "13lipzn1cnkd5dcg8n69cdghycifiin3jnjvgzsv0g60l1jk0lmp", - "depends": ["glmnet", "Rcpp", "RcppEigen", "survival"] + "depends": ["Rcpp", "RcppEigen", "glmnet", "survival"] }, "survival666": { "name": "survival666", @@ -115691,7 +116867,7 @@ "name": "survivalSL", "version": "0.94", "sha256": "03d38fh8pw5m2cd3v6hvcwc9d9b15idzrh9nj48cn6k27cnzf8qg", - "depends": ["caret", "date", "dplyr", "flexsurv", "glmnet", "glmnetUtils", "hdnom", "MASS", "randomForestSRC", "rpart", "survival"] + "depends": ["MASS", "caret", "date", "dplyr", "flexsurv", "glmnet", "glmnetUtils", "hdnom", "randomForestSRC", "rpart", "survival"] }, "survivalVignettes": { "name": "survivalVignettes", @@ -115709,19 +116885,19 @@ "name": "survivalsvm", "version": "0.0.5", "sha256": "1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga", - "depends": ["Hmisc", "kernlab", "Matrix", "pracma", "quadprog", "survival"] + "depends": ["Hmisc", "Matrix", "kernlab", "pracma", "quadprog", "survival"] }, "survivoR": { "name": "survivoR", - "version": "2.3.3", - "sha256": "08ficbw2bwc7pk5gcis6q6ghm7ivs47j5x3bjw4grrbr1jwssy18", - "depends": ["crayon", "dplyr", "DT", "ggplot2", "glue", "lubridate", "magrittr", "purrr", "readr", "shiny", "shinycssloaders", "shinyjs", "stringr", "tidyr"] + "version": "2.3.4", + "sha256": "1jc6qfms8awd49vgv9ncdbaqmm7c9ynx9azgbdcbvpp9pb9f3glc", + "depends": ["DT", "crayon", "dplyr", "ggplot2", "glue", "lubridate", "magrittr", "purrr", "readr", "shiny", "shinycssloaders", "shinyjs", "stringr", "tidyr"] }, "survminer": { "name": "survminer", "version": "0.4.9", "sha256": "0byh0wxdbjfwdrzsnqv4xlmnik6lj0vkkzfxy7lssk8dv5zmj7nz", - "depends": ["broom", "dplyr", "ggplot2", "ggpubr", "ggtext", "gridExtra", "magrittr", "maxstat", "purrr", "rlang", "scales", "survival", "survMisc", "tibble", "tidyr"] + "depends": ["broom", "dplyr", "ggplot2", "ggpubr", "ggtext", "gridExtra", "magrittr", "maxstat", "purrr", "rlang", "scales", "survMisc", "survival", "tibble", "tidyr"] }, "survmixer": { "name": "survmixer", @@ -115731,8 +116907,8 @@ }, "survobj": { "name": "survobj", - "version": "3.1.0", - "sha256": "0wd6ghnzvla7lxpg8nnjxmal6v82321q7kpwmvlswp8b4s0rp89l", + "version": "3.1.1", + "sha256": "0vxv34sj15077jgiq1jfw7wdi0j396scp7ngz9nzg7zq1icg214q", "depends": ["dplyr", "ggplot2", "survival", "tidyr"] }, "survout": { @@ -115751,13 +116927,13 @@ "name": "survstan", "version": "0.0.7.1", "sha256": "1yd634a4bqv5sfmsp2n4xxjjn23ms67iw3zzaa0yqzwldh09z6ng", - "depends": ["actuar", "BH", "broom", "doFuture", "dplyr", "extraDistr", "foreach", "future", "generics", "ggplot2", "gridExtra", "MASS", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rlang", "rstan", "rstantools", "StanHeaders", "survival", "tibble", "tidyr"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "actuar", "broom", "doFuture", "dplyr", "extraDistr", "foreach", "future", "generics", "ggplot2", "gridExtra", "purrr", "rlang", "rstan", "rstantools", "survival", "tibble", "tidyr"] }, "susieR": { "name": "susieR", "version": "0.12.35", "sha256": "0fhdc3lkhl4s9h2ng72gypy2z3hgk6566jfhwhsfbddyzd22drpd", - "depends": ["crayon", "ggplot2", "Matrix", "matrixStats", "mixsqp", "reshape"] + "depends": ["Matrix", "crayon", "ggplot2", "matrixStats", "mixsqp", "reshape"] }, "susographql": { "name": "susographql", @@ -115793,7 +116969,7 @@ "name": "svIDE", "version": "0.9-54", "sha256": "1a03xpjx22xhxfqkgcm1pmal0dlp544hvnckj0p6sy4y56hmsfik", - "depends": ["svMisc", "XML"] + "depends": ["XML", "svMisc"] }, "svKomodo": { "name": "svKomodo", @@ -115841,7 +117017,7 @@ "name": "svars", "version": "1.3.11", "sha256": "1y8klpj4b1dcba0d3b3kr29n8ji8pfis7v311ph0bx4j1mwilc9g", - "depends": ["clue", "copula", "DEoptim", "expm", "ggplot2", "pbapply", "Rcpp", "RcppArmadillo", "reshape2", "steadyICA", "strucchange", "vars", "zoo"] + "depends": ["DEoptim", "Rcpp", "RcppArmadillo", "clue", "copula", "expm", "ggplot2", "pbapply", "reshape2", "steadyICA", "strucchange", "vars", "zoo"] }, "svd": { "name": "svd", @@ -115883,7 +117059,7 @@ "name": "svines", "version": "0.2.3", "sha256": "0pmipkywpffs5zkvgdncz4ila6wndhvcm73bl73ncg7jqrrsi86r", - "depends": ["assertthat", "BH", "fGarch", "Rcpp", "RcppEigen", "RcppThread", "rvinecopulib", "univariateML", "wdm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppThread", "assertthat", "fGarch", "rvinecopulib", "univariateML", "wdm"] }, "svmpath": { "name": "svmpath", @@ -115911,15 +117087,15 @@ }, "svs": { "name": "svs", - "version": "3.0.0", - "sha256": "1jn3dbaqpgydkwf9y7hq97nva26vvrpl9zmw2bw4ky1qgzgz1ypb", - "depends": ["gtools", "Matrix"] + "version": "3.1.1", + "sha256": "0hfs0dif4b9ssi98mv2aa849blgdgvphymafabmsix4nkdjqzi2k", + "depends": ["Matrix", "gtools"] }, "svyVGAM": { "name": "svyVGAM", "version": "1.2", "sha256": "01y372p52xjd7j20xk5gwxkl8sfnwdvixx3pb3f6r407ca7l330h", - "depends": ["survey", "VGAM"] + "depends": ["VGAM", "survey"] }, "svydiags": { "name": "svydiags", @@ -115931,7 +117107,7 @@ "name": "svylme", "version": "1.5-1", "sha256": "1bbg6ha0crg166856h65aly9l5x8y18wv39jymbaczqhs0ba5w1s", - "depends": ["lme4", "Matrix", "minqa", "survey"] + "depends": ["Matrix", "lme4", "minqa", "survey"] }, "svyweight": { "name": "svyweight", @@ -115949,43 +117125,43 @@ "name": "swa", "version": "0.8.1", "sha256": "1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4", - "depends": ["ggplot2", "reshape", "ROCR"] + "depends": ["ROCR", "ggplot2", "reshape"] }, "swaRm": { "name": "swaRm", "version": "0.6.0", "sha256": "0p29dyig4zyrjp5gbm17q4s4g2jxl2idq6cqp6zyhsr0n197d38h", - "depends": ["geosphere", "lubridate", "MASS", "splancs"] + "depends": ["MASS", "geosphere", "lubridate", "splancs"] }, "swaRmverse": { "name": "swaRmverse", "version": "0.1.0", "sha256": "1z14ys2y42griwbwcjilk552haczlfbazjzwa5g6kvlxjibm1dq0", - "depends": ["geosphere", "pbapply", "Rtsne", "swaRm", "trackdf"] + "depends": ["Rtsne", "geosphere", "pbapply", "swaRm", "trackdf"] }, "swag": { "name": "swag", "version": "0.1.0", "sha256": "1w6schbj5gw7278krjzkcwafz3wv7vp7cfsvy17c0i1b5g3qqkpd", - "depends": ["caret", "Rdpack"] + "depends": ["Rdpack", "caret"] }, "swagger": { "name": "swagger", - "version": "5.17.14", - "sha256": "0vbz6cm6qclgydjlbymjjcsdb94bs8yprk5wmzzp6ny3ghaxjh9k", + "version": "5.17.14.1", + "sha256": "0ykmz3j1n06w1injcnlkb3xv79vwiyv94j74m950rfrbv97dda58", "depends": [] }, "swamp": { "name": "swamp", "version": "1.5.1", "sha256": "1mj6cqrc19p07v051fg6ikhhbccsg2lvz7wjiakaswqqm0269843", - "depends": ["amap", "gplots", "impute", "MASS"] + "depends": ["MASS", "amap", "gplots", "impute"] }, "swaprinc": { "name": "swaprinc", "version": "1.0.1", "sha256": "0r90w387chh4xgqn7jfi2wawsgr8faansp94hrp4vkhdmbbsb86z", - "depends": ["broom", "broom_mixed", "dplyr", "Gifi", "lme4", "magrittr", "rlang", "tidyselect"] + "depends": ["Gifi", "broom", "broom_mixed", "dplyr", "lme4", "magrittr", "rlang", "tidyselect"] }, "swatches": { "name": "swatches", @@ -116009,7 +117185,7 @@ "name": "sweater", "version": "0.1.8", "sha256": "045cyhdsnrhkcpgpgv7s209wn2pa9plj7pnlmmnfiz7dy67ikkr3", - "depends": ["cli", "combinat", "data_table", "LiblineaR", "proxy", "purrr", "quanteda", "Rcpp"] + "depends": ["LiblineaR", "Rcpp", "cli", "combinat", "data_table", "proxy", "purrr", "quanteda"] }, "sweep": { "name": "sweep", @@ -116037,15 +117213,15 @@ }, "swfscDAS": { "name": "swfscDAS", - "version": "0.6.2", - "sha256": "146xm4i0khdk217x4mgxi1j006fk8xpqqjf1hll6p2ky65iklmj4", + "version": "0.6.3", + "sha256": "0xyhaabbcmb3hja6pylnmr2vwxqhsxa47ih8chdwcnrz5lqz9inw", "depends": ["dplyr", "lubridate", "magrittr", "purrr", "readr", "rlang", "sf", "swfscMisc", "tidyr"] }, "swfscMisc": { "name": "swfscMisc", "version": "1.6.5", "sha256": "1qc2d3ykzxqqnjdq93j9nvkb8gfkvyr2x1l657q7jh1wcj8b7754", - "depends": ["abind", "dplyr", "ggplot2", "ggrepel", "HDInterval", "kknn", "magrittr", "modeest", "rlang", "runjags", "sf", "spatstat_geom", "tibble", "tidyr"] + "depends": ["HDInterval", "abind", "dplyr", "ggplot2", "ggrepel", "kknn", "magrittr", "modeest", "rlang", "runjags", "sf", "spatstat_geom", "tibble", "tidyr"] }, "swgee": { "name": "swgee", @@ -116069,7 +117245,7 @@ "name": "swirl", "version": "2.4.5", "sha256": "0cqyn2rnqfkb2wza4zdr1kcms5l0igbq79xh5i7765agdday2z9w", - "depends": ["digest", "httr", "RCurl", "stringr", "testthat", "yaml"] + "depends": ["RCurl", "digest", "httr", "stringr", "testthat", "yaml"] }, "swirlify": { "name": "swirlify", @@ -116087,7 +117263,7 @@ "name": "switchSelection", "version": "1.1.2", "sha256": "0mgl3s02pz9nbhdnm7fhyd8vbrfl718rv7bardlqc448qyb78hb8", - "depends": ["gena", "hpa", "mnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "gena", "hpa", "mnorm"] }, "switchboard": { "name": "switchboard", @@ -116121,8 +117297,8 @@ }, "syllogi": { "name": "syllogi", - "version": "1.0.2", - "sha256": "0f461qak9naglyfqisc6fbv076v5ncijrv5ja2p37h39dc8i3fxz", + "version": "1.0.3", + "sha256": "1rdgkc4vncx74awznjkfldma5n7jbv2cd7sapyl064vlh0hhrlqf", "depends": [] }, "sylly": { @@ -116147,31 +117323,31 @@ "name": "symDMatrix", "version": "2.1.1", "sha256": "0xmpw37qkbadqp1idv8qmazdmmv0sd4fwgihg1b97hxzqhsxw0fh", - "depends": ["bit", "ff", "LinkedMatrix"] + "depends": ["LinkedMatrix", "bit", "ff"] }, "symSEM": { "name": "symSEM", "version": "0.4", "sha256": "0zk9a1l1pcyjg43j8jafbms072kzz6qqz514a0kbnyg7ja0bfrmj", - "depends": ["caracas", "metaSEM", "OpenMx"] + "depends": ["OpenMx", "caracas", "metaSEM"] }, "symbol_equation_gpt": { "name": "symbol.equation.gpt", - "version": "1.1.3", - "sha256": "1z7ww9wvyd4ma7bk0ynp2rbkrajd8b3frb1msh8wn2msj5k7pfpg", + "version": "1.1.4", + "sha256": "0h1301406spbl7yz0i0b1vqqrf5zd0yxvxx3ljsi5pj4mdhp5j32", "depends": ["htmltools", "markdown", "nextGenShinyApps", "r2symbols", "rstudioapi", "shiny", "shinyStorePlus"] }, "symbolicDA": { "name": "symbolicDA", "version": "0.7-1", "sha256": "1x1qwrf587lgp9ciakrhiy3wj4g90x4g7r784rr2b97g1xwysjff", - "depends": ["ade4", "cluster", "clusterSim", "e1071", "RSDA", "shapes", "XML"] + "depends": ["RSDA", "XML", "ade4", "cluster", "clusterSim", "e1071", "shapes"] }, "symbolicQspray": { "name": "symbolicQspray", - "version": "1.0.0", - "sha256": "03znlsgyli2jdbv4i1k358j1796w11zbiidl3iy9lgv9adrh3cnh", - "depends": ["BH", "gmp", "qspray", "ratioOfQsprays", "Rcpp", "RcppArmadillo", "RcppCGAL"] + "version": "1.1.0", + "sha256": "0l7lhpxnbbfgwypyqy3sy13vcjv63fv707i5d4r9gh2almk373s7", + "depends": ["BH", "Rcpp", "RcppCGAL", "gmp", "qspray", "ratioOfQsprays"] }, "symengine": { "name": "symengine", @@ -116195,7 +117371,7 @@ "name": "symphony", "version": "0.1.1", "sha256": "0bgdhah202sh5mjbzqzk14vkl6xwdxxhri0ik03xh654b4s8hscc", - "depends": ["class", "data_table", "dplyr", "ggplot2", "harmony", "irlba", "magrittr", "Matrix", "purrr", "RANN", "RColorBrewer", "Rcpp", "RcppArmadillo", "rlang", "tibble", "tidyr", "uwot"] + "depends": ["Matrix", "RANN", "RColorBrewer", "Rcpp", "RcppArmadillo", "class", "data_table", "dplyr", "ggplot2", "harmony", "irlba", "magrittr", "purrr", "rlang", "tibble", "tidyr", "uwot"] }, "symptomcheckR": { "name": "symptomcheckR", @@ -116219,7 +117395,7 @@ "name": "synchronicity", "version": "1.3.10", "sha256": "12svf4xzb9s3m1h2ddqgl6q2v57ifsj2p80j8cg2k0543a43pww2", - "depends": ["BH", "bigmemory_sri", "Rcpp", "uuid"] + "depends": ["BH", "Rcpp", "bigmemory_sri", "uuid"] }, "synchrony": { "name": "synchrony", @@ -116255,12 +117431,12 @@ "name": "synthACS", "version": "1.7.1", "sha256": "1s4jawg2g0zy41y0ajacki4nif9m3r0hnaz63yhapcnizc37lyy1", - "depends": ["acs", "data_table", "Rcpp", "retry"] + "depends": ["Rcpp", "acs", "data_table", "retry"] }, "synthesis": { "name": "synthesis", - "version": "1.2.4", - "sha256": "1yb0z4klz4hd7ab83j3h4x8v2yp2glmnnvz64g76iclx5mcgl6az", + "version": "1.2.5", + "sha256": "0zsk3y322qzmq3rcclka176xbqfwqkg2r4p3k0cx057dkn4v7866", "depends": ["MASS"] }, "synthesisr": { @@ -116279,7 +117455,13 @@ "name": "synthpop", "version": "1.8-0", "sha256": "0ljq3vhprzxj0p5s57pr223n3mxbiwz0p5bdvjcdkw4xykx7zkka", - "depends": ["broman", "classInt", "foreign", "ggplot2", "lattice", "MASS", "mipfp", "nnet", "party", "plyr", "polspline", "proto", "randomForest", "ranger", "rmutil", "rpart", "stringr", "survival"] + "depends": ["MASS", "broman", "classInt", "foreign", "ggplot2", "lattice", "mipfp", "nnet", "party", "plyr", "polspline", "proto", "randomForest", "ranger", "rmutil", "rpart", "stringr", "survival"] + }, + "syrup": { + "name": "syrup", + "version": "0.1.1", + "sha256": "008h2fzj620fh4gkbfjs40yk2mq047512djraqkj501s80x0rvib", + "depends": ["bench", "callr", "dplyr", "ps", "purrr", "rlang", "tibble", "vctrs", "withr"] }, "sys": { "name": "sys", @@ -116309,7 +117491,7 @@ "name": "systemfit", "version": "1.1-30", "sha256": "1qhw8gda85lliqhj67zsgva4cb6wihr5hks1c9c34y0n3ywgp52r", - "depends": ["car", "lmtest", "MASS", "Matrix", "sandwich"] + "depends": ["MASS", "Matrix", "car", "lmtest", "sandwich"] }, "systemfonts": { "name": "systemfonts", @@ -116321,19 +117503,19 @@ "name": "systemicrisk", "version": "0.4.3", "sha256": "05isv0wdx98s824nk0v8r3mqvmnrmsq7ffki40092snsfda3451z", - "depends": ["lpSolve", "Rcpp"] + "depends": ["Rcpp", "lpSolve"] }, "syt": { "name": "syt", - "version": "0.4.0", - "sha256": "1iw3nx0xsjrmmxmvr88nkawix7imdwv2agzhg7hqy6iaa263k6mi", + "version": "0.5.0", + "sha256": "1xpvvknyv5c0kvvipmyzrzrvqj51kkp86yl5gkgxfzs570zafwzp", "depends": ["Matrix", "partitions"] }, "syuzhet": { "name": "syuzhet", "version": "1.0.7", "sha256": "0cpjg16hwn6843jdxp4h94qjw1wwwblvjzg30w54rac08m62nkxg", - "depends": ["dplyr", "dtt", "NLP", "rlang", "textshape", "tidyr", "zoo"] + "depends": ["NLP", "dplyr", "dtt", "rlang", "textshape", "tidyr", "zoo"] }, "tLagInterim": { "name": "tLagInterim", @@ -116345,13 +117527,13 @@ "name": "tLagPropOdds", "version": "1.9", "sha256": "0bygx77s28izfwdyk6gihcyanch55cha7x52h29kxxp1kaapyf11", - "depends": ["dplyr", "R_utils", "survival"] + "depends": ["R_utils", "dplyr", "survival"] }, "tRigon": { "name": "tRigon", "version": "0.3.2", "sha256": "1qnvg06dgny2q4lfsbnjn5c664ibm332mr8rfwv5lzgr56d44nnk", - "depends": ["boot", "caret", "data_table", "dplyr", "DT", "factoextra", "ggcorrplot", "ggplot2", "ggpubr", "ggridges", "markdown", "patchwork", "randomForest", "RColorBrewer", "readxl", "sessioninfo", "shiny", "shinydashboard", "shinydashboardPlus", "shinyWidgets", "simpleboot", "writexl"] + "depends": ["DT", "RColorBrewer", "boot", "caret", "data_table", "dplyr", "factoextra", "ggcorrplot", "ggplot2", "ggpubr", "ggridges", "markdown", "patchwork", "randomForest", "readxl", "sessioninfo", "shiny", "shinyWidgets", "shinydashboard", "shinydashboardPlus", "simpleboot", "writexl"] }, "tRnslate": { "name": "tRnslate", @@ -116369,7 +117551,7 @@ "name": "tab", "version": "5.1.1", "sha256": "1kg8c1safi9klkx2mdkmsf5dn9piy4jljwd4ma7g4jz2rwl4jzhv", - "depends": ["dplyr", "kableExtra", "knitr", "MASS", "survey"] + "depends": ["MASS", "dplyr", "kableExtra", "knitr", "survey"] }, "tabbycat": { "name": "tabbycat", @@ -116399,7 +117581,7 @@ "name": "table.express", "version": "0.4.2", "sha256": "0iyx45q64ya82054alj1jm53zh2l8m05z743k0ifscyr0lkmp3zm", - "depends": ["data_table", "dplyr", "magrittr", "R6", "rlang", "tidyselect"] + "depends": ["R6", "data_table", "dplyr", "magrittr", "rlang", "tidyselect"] }, "table_glue": { "name": "table.glue", @@ -116435,7 +117617,7 @@ "name": "tabledown", "version": "1.0.0", "sha256": "1l2snq2damqckqi3nqiwlh3hiin3qs0wlkmlim9h9ar87dp56r44", - "depends": ["data_table", "dplyr", "ggplot2", "kutils", "lavaan", "magrittr", "mirt", "MOTE", "plotly", "psych", "tibble", "tidyr", "tidyselect"] + "depends": ["MOTE", "data_table", "dplyr", "ggplot2", "kutils", "lavaan", "magrittr", "mirt", "plotly", "psych", "tibble", "tidyr", "tidyselect"] }, "tableeasy": { "name": "tableeasy", @@ -116447,7 +117629,7 @@ "name": "tableone", "version": "0.13.2", "sha256": "1br78y68037g5v5jhgi9l393kj2msamdklim8ki40hmxk9bibkxi", - "depends": ["e1071", "gmodels", "labelled", "MASS", "nlme", "survey", "zoo"] + "depends": ["MASS", "e1071", "gmodels", "labelled", "nlme", "survey", "zoo"] }, "tablerDash": { "name": "tablerDash", @@ -116457,15 +117639,15 @@ }, "tables": { "name": "tables", - "version": "0.9.25", - "sha256": "1yqwnq44ylvqhr0lpadff6y9x362naz00j76jbfirjrrdrwhw05r", + "version": "0.9.28", + "sha256": "0adkbx8jcjxlx9jhg4ic1jyclx2x8ky9z8zd9x14xw8a94yczlnc", "depends": ["htmltools", "knitr"] }, "tableschema_r": { "name": "tableschema.r", "version": "1.1.2", "sha256": "1lnl1xybwzg00hqksbj2g6r1hrzwlh2al08hhml0n42khmvpg05g", - "depends": ["config", "future", "httr", "jsonlite", "jsonvalidate", "lubridate", "purrr", "R6", "RCurl", "rlist", "stringr", "urltools"] + "depends": ["R6", "RCurl", "config", "future", "httr", "jsonlite", "jsonvalidate", "lubridate", "purrr", "rlist", "stringr", "urltools"] }, "tablesgg": { "name": "tablesgg", @@ -116489,7 +117671,7 @@ "name": "tabnet", "version": "0.6.0", "sha256": "1bvbl1b4i3mx2qf6hjbkk114s1bq76gnhpfasy4c5q2f9k6z33c7", - "depends": ["coro", "data_tree", "dials", "dplyr", "ggplot2", "hardhat", "magrittr", "Matrix", "parsnip", "progress", "purrr", "rlang", "stringr", "tibble", "tidyr", "torch", "tune", "vctrs", "withr", "zeallot"] + "depends": ["Matrix", "coro", "data_tree", "dials", "dplyr", "ggplot2", "hardhat", "magrittr", "parsnip", "progress", "purrr", "rlang", "stringr", "tibble", "tidyr", "torch", "tune", "vctrs", "withr", "zeallot"] }, "taboolaR": { "name": "taboolaR", @@ -116499,8 +117681,8 @@ }, "tabr": { "name": "tabr", - "version": "0.4.9", - "sha256": "0dsm98lhl7j2bb3z5cliz1f34sv904svhniw6iar1nqh6p9y8a5l", + "version": "0.5.0", + "sha256": "0b8qg6zkfm7hqclpb79asjsz3p8kg0645n8gxc61r6gcv7hyzdvc", "depends": ["crayon", "dplyr", "ggplot2", "purrr", "tibble", "tidyr"] }, "tabshiftr": { @@ -116525,7 +117707,7 @@ "name": "tabulapdf", "version": "1.0.5-3", "sha256": "1cavgzchfpwa8mg7g4di5sys41909iwvy6sj0ah7p8cd623k9f7g", - "depends": ["png", "readr", "rJava"] + "depends": ["png", "rJava", "readr"] }, "tabularMLC": { "name": "tabularMLC", @@ -116549,7 +117731,7 @@ "name": "tabulate", "version": "0.1.0", "sha256": "1x5rf8shd3jxa7k8p8ak5a6c2fmxv476is5vlrg1fsg6f964h01v", - "depends": ["cli", "magrittr", "Rcpp", "rlang"] + "depends": ["Rcpp", "cli", "magrittr", "rlang"] }, "tabulator": { "name": "tabulator", @@ -116567,19 +117749,19 @@ "name": "tabxplor", "version": "1.1.3", "sha256": "1fxcbw117sz564ylxch7jgs6zv5d3lniyam5vlxfbdgvszlw9vhh", - "depends": ["cli", "crayon", "data_table", "DescTools", "dplyr", "forcats", "kableExtra", "magrittr", "pillar", "purrr", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["DescTools", "cli", "crayon", "data_table", "dplyr", "forcats", "kableExtra", "magrittr", "pillar", "purrr", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "tacmagic": { "name": "tacmagic", "version": "0.3.1", "sha256": "1rayyavjppi5dbcmb4yb2nf85ch2li766sdllfsirb19bb3d4c2d", - "depends": ["pracma", "R_matlab"] + "depends": ["R_matlab", "pracma"] }, "tactile": { "name": "tactile", "version": "0.2.1", "sha256": "1yly05zin0isad69d6j1k2nb9ykvz0gj2xs9mqiq2cda0mdxmh65", - "depends": ["gridExtra", "lattice", "latticeExtra", "MASS", "RColorBrewer"] + "depends": ["MASS", "RColorBrewer", "gridExtra", "lattice", "latticeExtra"] }, "tada": { "name": "tada", @@ -116601,15 +117783,15 @@ }, "tagtools": { "name": "tagtools", - "version": "0.1.0", - "sha256": "18r4hjip7dsij476h3fj8q7dgpnwh9fcbyvkly3669m5pqc1m3dw", - "depends": ["CircStats", "dplyr", "latex2exp", "lubridate", "matlab", "ncdf4", "plotly", "pracma", "readr", "signal", "stringr", "zoo", "zoom"] + "version": "0.2.0", + "sha256": "03vmvbhwrk105dzyfz1cjw6ar37rgacmc85fvcx85qh4rp0kbi53", + "depends": ["CircStats", "cowplot", "dplyr", "ggplot2", "latex2exp", "lubridate", "matlab", "ncdf4", "plotly", "pracma", "readr", "signal", "stringr", "zoo", "zoom"] }, "tailDepFun": { "name": "tailDepFun", "version": "1.0.1", "sha256": "0rrjg4ky3pjbfwppmnwyijvlzq3c3nf33rl0w4vly52v1ramp5c6", - "depends": ["copula", "cubature", "mvtnorm", "SpatialExtremes"] + "depends": ["SpatialExtremes", "copula", "cubature", "mvtnorm"] }, "tailTransform": { "name": "tailTransform", @@ -116633,13 +117815,13 @@ "name": "takos", "version": "0.2.0", "sha256": "09w9lkqhxdb26fvrsb8n16601kqpr2smplipx3lj6cdgbyhb1hqz", - "depends": ["baseline", "broom", "colorRamps", "data_table", "deSolve", "devEMF", "MASS", "minpack_lm", "pracma", "segmented", "sfsmisc", "smoother"] + "depends": ["MASS", "baseline", "broom", "colorRamps", "data_table", "deSolve", "devEMF", "minpack_lm", "pracma", "segmented", "sfsmisc", "smoother"] }, "tame": { "name": "tame", "version": "0.0.1", "sha256": "183s8mxy1wvqkwick5gzrf5ijx8frwk2b8bpb4hh5rwvlqwm6p4h", - "depends": ["dplyr", "fuzzyjoin", "magrittr", "purrr", "Rcpp", "Rfast", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["Rcpp", "Rfast", "dplyr", "fuzzyjoin", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "tanaka": { "name": "tanaka", @@ -116651,7 +117833,7 @@ "name": "tangram", "version": "0.8.2", "sha256": "1r4wvz3nrms3mh06a7zykhkbsi4hz57xdn7af49yiypynhrxiin5", - "depends": ["base64enc", "digest", "htmltools", "knitr", "magrittr", "R6", "stringi", "stringr"] + "depends": ["R6", "base64enc", "digest", "htmltools", "knitr", "magrittr", "stringi", "stringr"] }, "tangram_pipe": { "name": "tangram.pipe", @@ -116669,7 +117851,7 @@ "name": "tapnet", "version": "0.3", "sha256": "1fjg98m19iwbzijs5b5l4ssrbx1shv1hmgn1166cbni9y76m44sh", - "depends": ["ape", "bipartite", "MPSEM", "phytools", "vegan"] + "depends": ["MPSEM", "ape", "bipartite", "phytools", "vegan"] }, "tarchetypes": { "name": "tarchetypes", @@ -116687,25 +117869,25 @@ "name": "targeted", "version": "0.5", "sha256": "176h4zswxf33394ngf4kczcan4acs91jnpk5pyz5fw49l5yhkqlg", - "depends": ["data_table", "digest", "futile_logger", "future_apply", "lava", "mets", "optimx", "progressr", "R6", "Rcpp", "RcppArmadillo", "survival"] + "depends": ["R6", "Rcpp", "RcppArmadillo", "data_table", "digest", "futile_logger", "future_apply", "lava", "mets", "optimx", "progressr", "survival"] }, "targets": { "name": "targets", - "version": "1.7.0", - "sha256": "1h939mvyxd1wjakcbxjxcmn6a7i23ya1kc89aqwarizsj00hdjil", - "depends": ["base64url", "callr", "cli", "codetools", "data_table", "igraph", "knitr", "ps", "R6", "rlang", "secretbase", "tibble", "tidyselect", "vctrs", "yaml"] + "version": "1.7.1", + "sha256": "1r4pg990nhmyg4i15qgqafvqas4vh5rvcki3iaff2hyrfdcmy6vy", + "depends": ["R6", "base64url", "callr", "cli", "codetools", "data_table", "igraph", "knitr", "ps", "rlang", "secretbase", "tibble", "tidyselect", "vctrs", "yaml"] }, "tashu": { "name": "tashu", "version": "0.1.1", "sha256": "0rirjalridr79a7j3qz80l2vp6m8paqr97ac241b58756k7nr5j7", - "depends": ["dplyr", "drat", "ggplot2", "lubridate", "plyr", "randomForest", "RColorBrewer", "reshape2"] + "depends": ["RColorBrewer", "dplyr", "drat", "ggplot2", "lubridate", "plyr", "randomForest", "reshape2"] }, "tastypie": { "name": "tastypie", "version": "0.1.1", "sha256": "0a7wq8jg3f0852y9pla1f63dqnkwn3vnb9p7fh9jq9rf75ljcpjk", - "depends": ["dplyr", "fmsb", "ggplot2", "packcircles", "RColorBrewer", "scales", "shadowtext", "tibble"] + "depends": ["RColorBrewer", "dplyr", "fmsb", "ggplot2", "packcircles", "scales", "shadowtext", "tibble"] }, "tatest": { "name": "tatest", @@ -116747,7 +117929,7 @@ "name": "taxadb", "version": "0.2.1", "sha256": "0m6rbvnf6ngz6i2w5jvmca0zl0pyy3b30vhjqxi08glii5fkwx2k", - "depends": ["contentid", "DBI", "dbplyr", "dplyr", "duckdb", "magrittr", "memoise", "rlang", "stringi", "tibble"] + "depends": ["DBI", "contentid", "dbplyr", "dplyr", "duckdb", "magrittr", "memoise", "rlang", "stringi", "tibble"] }, "taxalight": { "name": "taxalight", @@ -116759,37 +117941,31 @@ "name": "taxize", "version": "0.9.100", "sha256": "0afdjcwkkpkc5kgk558jccnw6jzs6mswd4i86c316pgb8py7irg2", - "depends": ["ape", "bold", "cli", "conditionz", "crayon", "crul", "data_table", "foreach", "jsonlite", "natserv", "phangorn", "R6", "ritis", "rotl", "rredlist", "tibble", "wikitaxa", "worrms", "xml2", "zoo"] + "depends": ["R6", "ape", "bold", "cli", "conditionz", "crayon", "crul", "data_table", "foreach", "jsonlite", "natserv", "phangorn", "ritis", "rotl", "rredlist", "tibble", "wikitaxa", "worrms", "xml2", "zoo"] }, "taxizedb": { "name": "taxizedb", "version": "0.3.1", "sha256": "157xpbmqp3l0blf6n7cb0qswj12v39rhvx0zkbrc2w73g601naj5", - "depends": ["curl", "DBI", "dbplyr", "dplyr", "hoardr", "magrittr", "readr", "rlang", "RSQLite", "tibble"] + "depends": ["DBI", "RSQLite", "curl", "dbplyr", "dplyr", "hoardr", "magrittr", "readr", "rlang", "tibble"] }, "taxlist": { "name": "taxlist", - "version": "0.2.4", - "sha256": "144nsiz90nkrm2v4nnhpvdnzpvjg2jh88dkqrm4gjm0drl9s981g", + "version": "0.3.0", + "sha256": "15abqk70dmz39m85aczwfvrhyvmw53r49l6ywip1i84pla991wsg", "depends": ["biblio", "foreign", "stringdist", "stringi", "stringr", "vegdata"] }, - "taxonbridge": { - "name": "taxonbridge", - "version": "1.2.2", - "sha256": "1ivks3bvwyn0ybvyz6dhsx7qxnlskf4icjkgsichdv4p24w5iwb9", - "depends": ["dplyr", "ggplot2", "purrr", "rje", "stringr", "vroom", "withr"] + "taxnames": { + "name": "taxnames", + "version": "0.1.0", + "sha256": "02f3n010gc91jd2l20w7kvjjsd2cix32xy0p4jx0aywb0mx8sxj2", + "depends": ["taxlist"] }, "taxonomizr": { "name": "taxonomizr", "version": "0.10.6", "sha256": "1g4r42zc9h6f0x875b0nyg56frzn4q7k5vk1jkwczz6ic5cbwigj", - "depends": ["curl", "data_table", "R_utils", "RSQLite"] - }, - "taxotools": { - "name": "taxotools", - "version": "0.0.139", - "sha256": "1nx79a0jfy0xrd83zk3zwk65mdk35lgz564b3fmhdv9rqpmg9q7n", - "depends": ["plyr", "rmarkdown", "sqldf", "stringdist", "stringi", "stringr", "taxize", "wikitaxa"] + "depends": ["RSQLite", "R_utils", "curl", "data_table"] }, "tayloRswift": { "name": "tayloRswift", @@ -116811,9 +117987,9 @@ }, "tbea": { "name": "tbea", - "version": "1.4.2", - "sha256": "1lffwmy4qiy24vkhizv8vxhffm35xh7ls818fhn50j7my8gzpip1", - "depends": ["ape", "boot", "coda", "Rfit"] + "version": "1.5.0", + "sha256": "0h2v6h93r36h9v7g6w4jrj38rln9qqck5xnwcljdrhnd8r5x3v29", + "depends": ["Rfit", "ape", "boot", "coda"] }, "tbl2xts": { "name": "tbl2xts", @@ -116849,19 +118025,19 @@ "name": "tcgaViz", "version": "1.0.2", "sha256": "0k1jrgbxzlc9q3cx5y03mxfrrvhdfwjjqjfqlmrq72skbl027y08", - "depends": ["config", "data_table", "dplyr", "DT", "ggplot2", "ggpubr", "golem", "magrittr", "plotly", "readr", "reshape2", "rlang", "rstatix", "scales", "shiny", "shinyFeedback", "shinyjs", "stringr", "tidyr", "tidyselect"] + "depends": ["DT", "config", "data_table", "dplyr", "ggplot2", "ggpubr", "golem", "magrittr", "plotly", "readr", "reshape2", "rlang", "rstatix", "scales", "shiny", "shinyFeedback", "shinyjs", "stringr", "tidyr", "tidyselect"] }, "tci": { "name": "tci", "version": "0.2.0", "sha256": "15drq6rvakf8jxmb1g5d7jjl7vnbzg314d809zzq19bicivvxsqj", - "depends": ["ggplot2", "gridExtra", "knitr", "mvtnorm", "Rcpp", "RcppArmadillo", "reshape", "reshape2", "truncnorm", "xtable"] + "depends": ["Rcpp", "RcppArmadillo", "ggplot2", "gridExtra", "knitr", "mvtnorm", "reshape", "reshape2", "truncnorm", "xtable"] }, "tcl": { "name": "tcl", "version": "0.2.0", "sha256": "0n735xyl0fr3zgigw68xpy1ky3rfd2djwg9qhgbgif0cvgrrki1n", - "depends": ["eRm", "lattice", "ltm", "MASS", "Matrix", "numDeriv", "psychotools", "rlang"] + "depends": ["MASS", "Matrix", "eRm", "lattice", "ltm", "numDeriv", "psychotools", "rlang"] }, "tcltk2": { "name": "tcltk2", @@ -116873,19 +118049,19 @@ "name": "tclust", "version": "2.0-4", "sha256": "0y05aqpmal7ky33hs8n1phai94d7f48ich43jvy4m5wbfxkp2rm6", - "depends": ["doParallel", "foreach", "MASS", "Rcpp", "RcppArmadillo"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "doParallel", "foreach"] }, "tcpl": { "name": "tcpl", "version": "3.1.0", "sha256": "0s35j9ky49d2f58hg93a47l6j855vm95a3qzwq3i8wd0p2zh1x7b", - "depends": ["data_table", "DBI", "dplyr", "ggplot2", "gridExtra", "numDeriv", "plotly", "RColorBrewer", "RMariaDB", "sqldf", "stringr", "tcplfit2", "tidyr"] + "depends": ["DBI", "RColorBrewer", "RMariaDB", "data_table", "dplyr", "ggplot2", "gridExtra", "numDeriv", "plotly", "sqldf", "stringr", "tcplfit2", "tidyr"] }, "tcplfit2": { "name": "tcplfit2", "version": "0.1.6", "sha256": "1znhma87nyy36m3viyh80m6gygqh4iwwh1xj0nw6wh88qal4935p", - "depends": ["numDeriv", "RColorBrewer", "stringr"] + "depends": ["RColorBrewer", "numDeriv", "stringr"] }, "td": { "name": "td", @@ -116897,7 +118073,7 @@ "name": "tdROC", "version": "2.0", "sha256": "0m53a9w2365mb1bq9wlj7gwsabnbh9m4ax8klq22frj2dzvlk7xm", - "depends": ["magrittr", "Rcpp", "survival"] + "depends": ["Rcpp", "magrittr", "survival"] }, "tdata": { "name": "tdata", @@ -116907,8 +118083,8 @@ }, "tdaunif": { "name": "tdaunif", - "version": "0.1.1", - "sha256": "03m8lzg4w1ys0shr2gir5m78c02r71l5pwqgvpcn004kirh3xhwv", + "version": "0.2.0", + "sha256": "0hygfm589rhcbq7ls4jprxwxvksqqr7fh4i5xgk5fb09fdqy9k1g", "depends": [] }, "tdcmStan": { @@ -116919,15 +118095,15 @@ }, "tdigest": { "name": "tdigest", - "version": "0.4.1", - "sha256": "1g4yk01lmx8cz5q06bxm3kcsi7c9cvpdfi925csc4qaf5rdrad4y", + "version": "0.4.2", + "sha256": "0a6zd4y7wrxdwl3fchjn6g8p70frd0jpq9a6cf5bnxbhr5sjk6x1", "depends": ["magrittr"] }, "tdr": { "name": "tdr", "version": "0.13", "sha256": "0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15", - "depends": ["ggplot2", "lattice", "RColorBrewer"] + "depends": ["RColorBrewer", "ggplot2", "lattice"] }, "tdsa": { "name": "tdsa", @@ -116981,25 +118157,25 @@ "name": "teal.modules.clinical", "version": "0.9.1", "sha256": "1fvy0xcbxjfskdyp3y4y70y7q6swmkjzpswkw7z3fq856fbnaz75", - "depends": ["broom", "checkmate", "cowplot", "dplyr", "DT", "ggplot2", "ggrepel", "lifecycle", "rlistings", "rmarkdown", "rtables", "scales", "shiny", "shinyjs", "shinyvalidate", "shinyWidgets", "teal", "teal_code", "teal_data", "teal_logger", "teal_reporter", "teal_transform", "teal_widgets", "tern", "tern_gee", "tern_mmrm", "vistime"] + "depends": ["DT", "broom", "checkmate", "cowplot", "dplyr", "ggplot2", "ggrepel", "lifecycle", "rlistings", "rmarkdown", "rtables", "scales", "shiny", "shinyWidgets", "shinyjs", "shinyvalidate", "teal", "teal_code", "teal_data", "teal_logger", "teal_reporter", "teal_transform", "teal_widgets", "tern", "tern_gee", "tern_mmrm", "vistime"] }, "teal_modules_general": { "name": "teal.modules.general", "version": "0.3.0", "sha256": "0j07ak6g2rk8b16pix853j7hvyhac580akflwxxb97zvzipy51qx", - "depends": ["checkmate", "dplyr", "DT", "forcats", "ggmosaic", "ggplot2", "logger", "scales", "shiny", "shinyjs", "shinyTree", "shinyvalidate", "shinyWidgets", "stringr", "teal", "teal_code", "teal_data", "teal_logger", "teal_reporter", "teal_transform", "teal_widgets", "tern", "tibble", "tidyr"] + "depends": ["DT", "checkmate", "dplyr", "forcats", "ggmosaic", "ggplot2", "logger", "scales", "shiny", "shinyTree", "shinyWidgets", "shinyjs", "shinyvalidate", "stringr", "teal", "teal_code", "teal_data", "teal_logger", "teal_reporter", "teal_transform", "teal_widgets", "tern", "tibble", "tidyr"] }, "teal_reporter": { "name": "teal.reporter", "version": "0.3.1", "sha256": "1hgp17rjmwjqi00w28qgh5h13vn58wnwhx4y8825qnc8v45vchb5", - "depends": ["bslib", "checkmate", "flextable", "htmltools", "knitr", "lifecycle", "R6", "rmarkdown", "shiny", "shinybusy", "shinyWidgets", "yaml", "zip"] + "depends": ["R6", "bslib", "checkmate", "flextable", "htmltools", "knitr", "lifecycle", "rmarkdown", "shiny", "shinyWidgets", "shinybusy", "yaml", "zip"] }, "teal_slice": { "name": "teal.slice", "version": "0.5.1", "sha256": "0vnp61cmmbxfjmli7y9i9b388yh6rqic33a061s2k61j925cisg0", - "depends": ["bslib", "checkmate", "dplyr", "htmltools", "jsonlite", "lifecycle", "logger", "plotly", "R6", "shiny", "shinycssloaders", "shinyjs", "shinyWidgets", "teal_data", "teal_logger", "teal_widgets"] + "depends": ["R6", "bslib", "checkmate", "dplyr", "htmltools", "jsonlite", "lifecycle", "logger", "plotly", "shiny", "shinyWidgets", "shinycssloaders", "shinyjs", "teal_data", "teal_logger", "teal_widgets"] }, "teal_transform": { "name": "teal.transform", @@ -117011,7 +118187,7 @@ "name": "teal.widgets", "version": "0.4.2", "sha256": "0qdjc1w1kh0k155vp0w0rs5yh26lmds9i6xv4dhrgnn7h2gaqgv1", - "depends": ["bslib", "checkmate", "ggplot2", "htmltools", "lifecycle", "rtables", "shiny", "shinyjs", "shinyWidgets", "styler"] + "depends": ["bslib", "checkmate", "ggplot2", "htmltools", "lifecycle", "rtables", "shiny", "shinyWidgets", "shinyjs", "styler"] }, "tealeaves": { "name": "tealeaves", @@ -117029,13 +118205,13 @@ "name": "teamr", "version": "0.0.1", "sha256": "01gngws8lf093598wlzrv4ls74avsli6ij33v1plqgc0znyaw4s2", - "depends": ["httr", "jsonlite", "R6"] + "depends": ["R6", "httr", "jsonlite"] }, "tectonicr": { "name": "tectonicr", "version": "0.3.2", "sha256": "0w2pg7b3bk4vc72aw2n7hcp47aq7a25l41m9yh3x3a6ssnzcg350", - "depends": ["boot", "dplyr", "ggplot2", "RColorBrewer", "sf", "smoothr", "spatstat_explore", "spatstat_geom", "spatstat_univar", "spatstat_utils", "terra", "tidyr", "viridis", "zoo"] + "depends": ["RColorBrewer", "boot", "dplyr", "ggplot2", "sf", "smoothr", "spatstat_explore", "spatstat_geom", "spatstat_univar", "spatstat_utils", "terra", "tidyr", "viridis", "zoo"] }, "teda": { "name": "teda", @@ -117047,7 +118223,7 @@ "name": "tehtuner", "version": "0.3.0", "sha256": "1m1gkkl0kgjrlkbh3vz8lh64gq6l8v3vay0977lwx8g3yzs40z0g", - "depends": ["earth", "foreach", "glmnet", "party", "randomForestSRC", "Rdpack", "rpart", "stringr", "SuperLearner"] + "depends": ["Rdpack", "SuperLearner", "earth", "foreach", "glmnet", "party", "randomForestSRC", "rpart", "stringr"] }, "teigen": { "name": "teigen", @@ -117059,19 +118235,19 @@ "name": "telefit", "version": "1.0.3", "sha256": "0z6dr4ni00dyagbkzr3c7l4h2g23w3bfj99a9755vmrzyy6r45iq", - "depends": ["abind", "coda", "cowplot", "dplyr", "fields", "foreach", "ggplot2", "gtable", "itertools", "mvtnorm", "raster", "Rcpp", "RcppArmadillo", "RcppEigen", "reshape2", "scales", "scoringRules", "sp", "stringr"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "abind", "coda", "cowplot", "dplyr", "fields", "foreach", "ggplot2", "gtable", "itertools", "mvtnorm", "raster", "reshape2", "scales", "scoringRules", "sp", "stringr"] }, "telegram": { "name": "telegram", "version": "0.6.0", "sha256": "02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y", - "depends": ["curl", "httr", "jsonlite", "R6"] + "depends": ["R6", "curl", "httr", "jsonlite"] }, "telegram_bot": { "name": "telegram.bot", "version": "3.0.0", "sha256": "0fqv2piddb8i37rpvw6li25jhc9mbi7fyqmib90xah6qmlaji02g", - "depends": ["curl", "httpuv", "httr", "jsonlite", "openssl", "R6"] + "depends": ["R6", "curl", "httpuv", "httr", "jsonlite", "openssl"] }, "telemetR": { "name": "telemetR", @@ -117083,7 +118259,7 @@ "name": "telescope", "version": "0.1-0", "sha256": "1r6ciiy12jy7z4hb2jhgv1ml7p57rqcpfbz2fs0bn5bc1jbzm3ch", - "depends": ["abind", "bayesm", "DirichletReg", "extraDistr", "MCMCpack", "mvtnorm"] + "depends": ["DirichletReg", "MCMCpack", "abind", "bayesm", "extraDistr", "mvtnorm"] }, "telraamStats": { "name": "telraamStats", @@ -117113,7 +118289,7 @@ "name": "templateICAr", "version": "0.6.4", "sha256": "15f2bv4vcsnqcb2rnpa1ylhxj8a511ab3mil3b8n9icffpzgahy0", - "depends": ["abind", "excursions", "expm", "fMRItools", "ica", "Matrix", "matrixStats", "pesel", "Rcpp", "RcppEigen", "SQUAREM"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "SQUAREM", "abind", "excursions", "expm", "fMRItools", "ica", "matrixStats", "pesel"] }, "templates": { "name": "templates", @@ -117139,6 +118315,12 @@ "sha256": "0xpp1hi3xnkg55aixgy2bp5476i503h8gsiss9x7f15274kx0d7s", "depends": ["stringr"] }, + "tenm": { + "name": "tenm", + "version": "0.5.1", + "sha256": "1dx60ilpwzsn5gkm50pyxq1hkpk11i8gz9yj823ylqc5qbbrsq1q", + "depends": ["MASS", "dplyr", "furrr", "future", "lubridate", "purrr", "rgl", "sf", "stringr", "terra", "tidyr"] + }, "tensor": { "name": "tensor", "version": "1.5", @@ -117161,7 +118343,7 @@ "name": "tensorBSS", "version": "0.3.8", "sha256": "1chgkdshjpxzy0cxkgjzpr5k4v2hyad1vchrxyqhsj9isfic2581", - "depends": ["abind", "fICA", "ggplot2", "ICtest", "JADE", "Rcpp", "RcppArmadillo", "tensor", "tsBSS"] + "depends": ["ICtest", "JADE", "Rcpp", "RcppArmadillo", "abind", "fICA", "ggplot2", "tensor", "tsBSS"] }, "tensorEVD": { "name": "tensorEVD", @@ -117179,7 +118361,7 @@ "name": "tensorTS", "version": "1.0.2", "sha256": "11kmp5qy54rhb302jwpncsbqifgqn7zivav8ph1qbz3f3911chw2", - "depends": ["abind", "expm", "MASS", "Matrix", "pracma", "rTensor", "tensor"] + "depends": ["MASS", "Matrix", "abind", "expm", "pracma", "rTensor", "tensor"] }, "tensorflow": { "name": "tensorflow", @@ -117209,13 +118391,13 @@ "name": "tergm", "version": "4.2.0", "sha256": "0sfszgvm38y2j0j6hnwg2llf6djgxbw0ibq6cxv6blf4q9na5xfw", - "depends": ["coda", "ergm", "ergm_multi", "MASS", "network", "networkDynamic", "nlme", "purrr", "robustbase", "statnet_common"] + "depends": ["MASS", "coda", "ergm", "ergm_multi", "network", "networkDynamic", "nlme", "purrr", "robustbase", "statnet_common"] }, "tergmLite": { "name": "tergmLite", "version": "2.6.1", "sha256": "03dr3bfi5ywavfijkc6gmci8i1kmbsh26awhl7748mn9wcsgs2pc", - "depends": ["ergm", "network", "networkDynamic", "Rcpp", "statnet_common", "tergm", "tibble"] + "depends": ["Rcpp", "ergm", "network", "networkDynamic", "statnet_common", "tergm", "tibble"] }, "term": { "name": "term", @@ -117227,13 +118409,13 @@ "name": "terminaldigits", "version": "0.1.0", "sha256": "0vj7pylr410wi59qj2313iximsyl0v9ffg7z9gcfg720g5zrvfkm", - "depends": ["discretefit", "Rcpp"] + "depends": ["Rcpp", "discretefit"] }, "tern": { "name": "tern", - "version": "0.9.4", - "sha256": "1byv3q2kjd1aibzxhvwnm7fl2vsz069pxmcjx1zjl6w6453y5s3h", - "depends": ["broom", "car", "checkmate", "cowplot", "dplyr", "emmeans", "forcats", "formatters", "ggplot2", "gridExtra", "gtable", "labeling", "lifecycle", "magrittr", "MASS", "Rdpack", "rlang", "rtables", "scales", "survival", "tibble", "tidyr"] + "version": "0.9.5", + "sha256": "0pmx2f9xjw463jnnbdbpvlwjaq5c04lry8iavisxniwshr5piqfm", + "depends": ["MASS", "Rdpack", "broom", "car", "checkmate", "cowplot", "dplyr", "emmeans", "forcats", "formatters", "ggplot2", "gridExtra", "gtable", "labeling", "lifecycle", "magrittr", "rlang", "rtables", "scales", "survival", "tibble", "tidyr"] }, "tern_gee": { "name": "tern.gee", @@ -117275,7 +118457,7 @@ "name": "tessellation", "version": "2.3.0", "sha256": "0l8ffw7szmfd51lf9x8vh673zq0zg8rrx1527hgllddk82kyhmia", - "depends": ["colorsGen", "cxhull", "english", "hash", "Polychrome", "R6", "rgl", "Rvcg", "scales", "sets"] + "depends": ["Polychrome", "R6", "Rvcg", "colorsGen", "cxhull", "english", "hash", "rgl", "scales", "sets"] }, "tesselle": { "name": "tesselle", @@ -117287,7 +118469,7 @@ "name": "tesseract", "version": "5.2.1", "sha256": "1zhpl6pbi7gwwc9y1d8cd7hb21ljcs561lyysjva4cfmqm0sdazz", - "depends": ["curl", "digest", "pdftools", "rappdirs", "Rcpp"] + "depends": ["Rcpp", "curl", "digest", "pdftools", "rappdirs"] }, "test2norm": { "name": "test2norm", @@ -117353,7 +118535,7 @@ "name": "testforDEP", "version": "0.2.0", "sha256": "1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9", - "depends": ["Hmisc", "minerva", "Rcpp"] + "depends": ["Hmisc", "Rcpp", "minerva"] }, "testit": { "name": "testit", @@ -117365,7 +118547,7 @@ "name": "testthat", "version": "3.2.1.1", "sha256": "1xz94i0r62lslyqya8gz6i2r100wi26y5c2822v2i7lkflwwx1fp", - "depends": ["brio", "callr", "cli", "desc", "digest", "evaluate", "jsonlite", "lifecycle", "magrittr", "pkgload", "praise", "processx", "ps", "R6", "rlang", "waldo", "withr"] + "depends": ["R6", "brio", "callr", "cli", "desc", "digest", "evaluate", "jsonlite", "lifecycle", "magrittr", "pkgload", "praise", "processx", "ps", "rlang", "waldo", "withr"] }, "testthatmulti": { "name": "testthatmulti", @@ -117385,17 +118567,23 @@ "sha256": "06fr13ww2wqk753p0cnl1ldn3nqrvdfnz0lgkpldcn0xwiwjh2x2", "depends": ["mvtnorm"] }, + "tetRys": { + "name": "tetRys", + "version": "1.1", + "sha256": "0xqvkr6lick8isykgdpb9bmag6w19br2k6w26j8zlwa2kf84hw85", + "depends": ["audio"] + }, "tetraclasse": { "name": "tetraclasse", "version": "0.1.21", "sha256": "1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a", - "depends": ["dplyr", "FactoMineR", "ggplot2", "ggrepel", "magrittr", "reshape2", "tibble", "tidyr"] + "depends": ["FactoMineR", "dplyr", "ggplot2", "ggrepel", "magrittr", "reshape2", "tibble", "tidyr"] }, "tetragon": { "name": "tetragon", "version": "1.3.0", "sha256": "0ck7crfa63ra63pbpbq7qvn4kjkbr9wqndin4fd1b4hc8kprqqhx", - "depends": ["abind", "dqrng", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "Rfast", "scales", "stringr", "tictoc"] + "depends": ["Rfast", "abind", "dqrng", "entropy", "fANCOVA", "fastDummies", "ggplot2", "greybox", "imputeTS", "lubridate", "modeest", "moments", "narray", "philentropy", "purrr", "readr", "scales", "stringr", "tictoc"] }, "tetrascatt": { "name": "tetrascatt", @@ -117413,7 +118601,7 @@ "name": "texmex", "version": "2.4.9", "sha256": "1vdrhf4mn7c54w9zz0k4xpmvg9w3ysi67ncbr4pbllnarxa582yz", - "depends": ["ggplot2", "mvtnorm", "Rcpp"] + "depends": ["Rcpp", "ggplot2", "mvtnorm"] }, "texor": { "name": "texor", @@ -117423,14 +118611,14 @@ }, "texreg": { "name": "texreg", - "version": "1.39.3", - "sha256": "0kbdnxfgdin4vydrw84xzbw9xldvn8paikij9ya8976la6gpf6il", + "version": "1.39.4", + "sha256": "1h4377j18rja8mb72779zpj0ls5fxk15qdc92frx2av5c8wxvciy", "depends": ["httr"] }, "text": { "name": "text", - "version": "1.2.1", - "sha256": "06rvcdl06ki3qw46r7yp21jjjbgmmr2cyb0rgr7d1kqcwl12gcg4", + "version": "1.2.3", + "sha256": "0mgjc9yjrb3y1avzdqzx01zbdy1sl7glfgv2yvjrxkw3lw9lwjlb", "depends": ["cowplot", "dplyr", "furrr", "future", "ggplot2", "ggrepel", "magrittr", "overlapping", "parsnip", "purrr", "recipes", "reticulate", "rlang", "rsample", "stringi", "tibble", "tidyr", "tune", "workflows", "yardstick"] }, "text_alignment": { @@ -117443,7 +118631,7 @@ "name": "text2map", "version": "0.2.0", "sha256": "0fs51r2gz2kzyqd9i9vbyyvd8lx9ng40vxw3ncrph22b3vn9q5dl", - "depends": ["ClusterR", "doParallel", "dplyr", "fastmatch", "foreach", "igraph", "kit", "Matrix", "permute", "qgraph", "rlang", "rsvd", "stringi", "text2vec", "tibble"] + "depends": ["ClusterR", "Matrix", "doParallel", "dplyr", "fastmatch", "foreach", "igraph", "kit", "permute", "qgraph", "rlang", "rsvd", "stringi", "text2vec", "tibble"] }, "text2sdg": { "name": "text2sdg", @@ -117467,7 +118655,7 @@ "name": "text2vec", "version": "0.6.4", "sha256": "0sjlvp4zhzwc0ai7626fpw3ws8xv0xhl8gv8mrk24lrpk5nhin2h", - "depends": ["data_table", "digest", "lgr", "Matrix", "mlapi", "R6", "Rcpp", "rsparse", "stringi"] + "depends": ["Matrix", "R6", "Rcpp", "data_table", "digest", "lgr", "mlapi", "rsparse", "stringi"] }, "textBoxPlacement": { "name": "textBoxPlacement", @@ -117479,7 +118667,7 @@ "name": "textTinyR", "version": "1.1.8", "sha256": "15yzxxnnkaj9x94dqpsqy67r7mlh7wdqir5fira8sjr4j1fqx3l1", - "depends": ["BH", "data_table", "Matrix", "R6", "Rcpp", "RcppArmadillo"] + "depends": ["BH", "Matrix", "R6", "Rcpp", "RcppArmadillo", "data_table"] }, "textTools": { "name": "textTools", @@ -117515,7 +118703,7 @@ "name": "texteffect", "version": "0.3", "sha256": "1qcbr18h3vakh6ymw4axzqcqrpss6z68a592xl879b82l2nlq8a7", - "depends": ["boot", "ggplot2", "MASS"] + "depends": ["MASS", "boot", "ggplot2"] }, "texter": { "name": "texter", @@ -117539,13 +118727,13 @@ "name": "textir", "version": "2.0-5", "sha256": "0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb", - "depends": ["distrom", "gamlr", "Matrix"] + "depends": ["Matrix", "distrom", "gamlr"] }, "textmineR": { "name": "textmineR", "version": "3.0.5", "sha256": "0qpl9fnrirxsvch97pjwws02x67p3dk6fizg7h4wcjaihibbbx3q", - "depends": ["gtools", "magrittr", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "RSpectra", "stopwords", "stringr", "text2vec"] + "depends": ["Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "RcppProgress", "gtools", "magrittr", "stopwords", "stringr", "text2vec"] }, "textometry": { "name": "textometry", @@ -117557,7 +118745,7 @@ "name": "textplot", "version": "0.2.2", "sha256": "1ag2h365zsx0fxbl05s2yfhf1q13p40akvbqg4qwsb5ynh2a56bf", - "depends": ["data_table", "lattice", "Matrix"] + "depends": ["Matrix", "data_table", "lattice"] }, "textrank": { "name": "textrank", @@ -117575,7 +118763,7 @@ "name": "textrecipes", "version": "1.0.6", "sha256": "0c4l54vqawnwl1341mk5jvqwj1r0dwdprbp2fh362493c8fy04iv", - "depends": ["cpp11", "dplyr", "generics", "glue", "lifecycle", "magrittr", "Matrix", "purrr", "recipes", "rlang", "SnowballC", "tibble", "tokenizers", "vctrs"] + "depends": ["Matrix", "SnowballC", "cpp11", "dplyr", "generics", "glue", "lifecycle", "magrittr", "purrr", "recipes", "rlang", "tibble", "tokenizers", "vctrs"] }, "textreg": { "name": "textreg", @@ -117587,7 +118775,7 @@ "name": "textreuse", "version": "0.1.5", "sha256": "1mva0f6pk0kpfw0vf90qw3a25f1i3imdhk2s7hxyzans0z2237jd", - "depends": ["assertthat", "BH", "digest", "dplyr", "NLP", "Rcpp", "RcppProgress", "stringr", "tibble", "tidyr"] + "depends": ["BH", "NLP", "Rcpp", "RcppProgress", "assertthat", "digest", "dplyr", "stringr", "tibble", "tidyr"] }, "textshape": { "name": "textshape", @@ -117605,7 +118793,7 @@ "name": "textstem", "version": "0.1.4", "sha256": "1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2", - "depends": ["dplyr", "hunspell", "koRpus", "koRpus_lang_en", "lexicon", "quanteda", "SnowballC", "stringi", "textclean", "textshape"] + "depends": ["SnowballC", "dplyr", "hunspell", "koRpus", "koRpus_lang_en", "lexicon", "quanteda", "stringi", "textclean", "textshape"] }, "textutils": { "name": "textutils", @@ -117641,7 +118829,7 @@ "name": "tfarima", "version": "0.3.2", "sha256": "1vql4592js9kzv3466dn57dfx19w6i573nh933v2gcnr6mlzhiga", - "depends": ["numDeriv", "Rcpp", "RcppArmadillo", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "numDeriv", "zoo"] }, "tfautograph": { "name": "tfautograph", @@ -117651,8 +118839,8 @@ }, "tfdatasets": { "name": "tfdatasets", - "version": "2.9.0", - "sha256": "1q8zznwjjx809qvfjg07dhprqcsibzwq9i5sj377y4ypychxq2nl", + "version": "2.17.0", + "sha256": "1bvm1yk204c64ywva672q1pf9safnkyb7jlwaqz9jkgmqa9wwlxy", "depends": ["generics", "magrittr", "reticulate", "rlang", "tensorflow", "tidyselect", "vctrs"] }, "tfdeploy": { @@ -117675,9 +118863,9 @@ }, "tfevents": { "name": "tfevents", - "version": "0.0.3", - "sha256": "1a8dgmi71smaqc71r7pjpdgks6z7s0wkz5nll951846sxkhxpg5v", - "depends": ["blob", "cli", "digest", "ellipsis", "fs", "png", "Rcpp", "rlang", "vctrs", "withr", "zeallot"] + "version": "0.0.4", + "sha256": "06ll43agal3pgq6avfmz5fsf8kzgrh4c2zk823hk80mfpilrskj1", + "depends": ["Rcpp", "blob", "cli", "digest", "fs", "png", "rlang", "vctrs", "withr", "zeallot"] }, "tfhub": { "name": "tfhub", @@ -117717,15 +118905,15 @@ }, "tfrmt": { "name": "tfrmt", - "version": "0.1.1", - "sha256": "1jz5xvmfi53mki0d0jx5bvlmmz2y6pmmasij4c9jgdpd9p57ryaf", + "version": "0.1.2", + "sha256": "19ymfvz9pdlrgz2z6mnwz6w4wk7v3mj1pnfzddsy997ii4qh8y5k", "depends": ["dplyr", "forcats", "ggplot2", "glue", "gt", "jsonlite", "magrittr", "purrr", "rlang", "stringi", "stringr", "tibble", "tidyr", "tidyselect"] }, "tfrmtbuilder": { "name": "tfrmtbuilder", "version": "0.0.6", "sha256": "0c5x0sva90q7ghfz64fjy4w83a549ism6hwl6a1j4j81l9w6p8f7", - "depends": ["bslib", "dplyr", "DT", "fontawesome", "forcats", "gt", "purrr", "rio", "rlang", "shiny", "shinyAce", "shinycssloaders", "shinyFeedback", "shinyjs", "shinyWidgets", "sortable", "stringr", "tfrmt", "tidyr", "webshot2"] + "depends": ["DT", "bslib", "dplyr", "fontawesome", "forcats", "gt", "purrr", "rio", "rlang", "shiny", "shinyAce", "shinyFeedback", "shinyWidgets", "shinycssloaders", "shinyjs", "sortable", "stringr", "tfrmt", "tidyr", "webshot2"] }, "tfruns": { "name": "tfruns", @@ -117755,12 +118943,12 @@ "name": "tglkmeans", "version": "0.5.5", "sha256": "0hdnxgkxpgb8jm9aygv3wlhd42blm5nz906vlpl72blgcyc77hhh", - "depends": ["cli", "doFuture", "doRNG", "dplyr", "future", "ggplot2", "magrittr", "Matrix", "plyr", "purrr", "Rcpp", "RcppParallel", "tgstat", "tibble"] + "depends": ["Matrix", "Rcpp", "RcppParallel", "cli", "doFuture", "doRNG", "dplyr", "future", "ggplot2", "magrittr", "plyr", "purrr", "tgstat", "tibble"] }, "tgp": { "name": "tgp", - "version": "2.4-22", - "sha256": "0gpndjq2xiic6fb5187f4hgrqj3477pd83caajnw3yy9wan4vly6", + "version": "2.4-22.1", + "sha256": "1jf4mr59qp169z00pxb4kc0484mg73hgcyajg9hisdxl02qs1m4r", "depends": ["maptree"] }, "tgram": { @@ -117803,31 +118991,31 @@ "name": "theft", "version": "0.6.1", "sha256": "0fapqgbr3mnag8nvciz6cv7i0xadj8madjzqrd67if3z37afhn0p", - "depends": ["dplyr", "fabletools", "feasts", "purrr", "R_matlab", "Rcatch22", "reticulate", "rlang", "tibble", "tidyr", "tsfeatures", "tsibble"] + "depends": ["R_matlab", "Rcatch22", "dplyr", "fabletools", "feasts", "purrr", "reticulate", "rlang", "tibble", "tidyr", "tsfeatures", "tsibble"] }, "theftdlc": { "name": "theftdlc", "version": "0.1.0", "sha256": "0zv9ihzs41dk4q4wsfyi2v6g9z8gglak17l71bhvqs207rl923d1", - "depends": ["broom", "correctR", "dplyr", "e1071", "ggplot2", "janitor", "MASS", "mclust", "normaliseR", "purrr", "reshape2", "rlang", "Rtsne", "scales", "theft", "tibble", "tidyr", "umap"] + "depends": ["MASS", "Rtsne", "broom", "correctR", "dplyr", "e1071", "ggplot2", "janitor", "mclust", "normaliseR", "purrr", "reshape2", "rlang", "scales", "theft", "tibble", "tidyr", "umap"] }, "theiaR": { "name": "theiaR", "version": "0.4.0", "sha256": "07m532r67cil2ya2w9lfhycrm8n0ga0r3x7jwbp5jbd83hw4l1p6", - "depends": ["askpass", "httr", "R6", "raster", "XML"] + "depends": ["R6", "XML", "askpass", "httr", "raster"] }, "thematic": { "name": "thematic", - "version": "0.1.5", - "sha256": "1ims007m3h9qhfbav21hinqmkgs8kblslr22pvqp19ndlsibllki", + "version": "0.1.6", + "sha256": "00ym9blns25cq6wij8bjgq3g79bllm8h617lvd9ald51q78pd52h", "depends": ["farver", "ggplot2", "rappdirs", "rlang", "rstudioapi", "scales"] }, "themis": { "name": "themis", "version": "1.0.2", "sha256": "1qg1kxax866s84rgjlp2c153793j45lrvay8bqfjnc2cj04h2dgi", - "depends": ["dplyr", "generics", "glue", "gower", "hardhat", "lifecycle", "purrr", "RANN", "recipes", "rlang", "ROSE", "tibble", "vctrs", "withr"] + "depends": ["RANN", "ROSE", "dplyr", "generics", "glue", "gower", "hardhat", "lifecycle", "purrr", "recipes", "rlang", "tibble", "vctrs", "withr"] }, "thermocouple": { "name": "thermocouple", @@ -117861,8 +119049,8 @@ }, "this_path": { "name": "this.path", - "version": "2.4.0", - "sha256": "10zll3bh20wc3swk5y0if1bgx40pjz87yk9z7np5g3wgxp0wzcdv", + "version": "2.5.0", + "sha256": "0ickm26sqlgi6kz8vh92408l04brxqznwrrmhcs2pvk2czj6dr0p", "depends": [] }, "thor": { @@ -117881,7 +119069,7 @@ "name": "thredds", "version": "0.1-4", "sha256": "1323hgd7id4q1g88bczvnghdlb3g2vmywhij0f98ghj0a0ip6v00", - "depends": ["httr", "magrittr", "R6", "rlang", "xml2"] + "depends": ["R6", "httr", "magrittr", "rlang", "xml2"] }, "threejs": { "name": "threejs", @@ -117915,8 +119103,8 @@ }, "threshr": { "name": "threshr", - "version": "1.0.5", - "sha256": "0gr5vnb3bc6b2blpa63mvyhgyjkplq8x0p27h7czjnwinzwsrwrg", + "version": "1.0.6", + "sha256": "1ws40jlc22p4fb0wcczqf5aqgvsq464nr39rdm6vwwz7spvr8vly", "depends": ["revdbayes", "rust"] }, "thriftr": { @@ -117929,13 +119117,13 @@ "name": "thunder", "version": "1.1.3", "sha256": "0gn4kkpagh5blhp1zpgilkpa8mwfz8w05qlri5ca4wwcy7xkmn41", - "depends": ["aiRthermo", "curl", "dplyr", "httr", "Rcpp"] + "depends": ["Rcpp", "aiRthermo", "curl", "dplyr", "httr"] }, "thurstonianIRT": { "name": "thurstonianIRT", "version": "0.12.5", "sha256": "0rdiv9pdxxp36ggxlfs1g6jcv1f259ky2cpxb6kg21s4xfllrah2", - "depends": ["BH", "dplyr", "lavaan", "magrittr", "mvtnorm", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tibble", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "lavaan", "magrittr", "mvtnorm", "rlang", "rstan", "rstantools", "tibble", "tidyr"] }, "tibble": { "name": "tibble", @@ -117947,7 +119135,7 @@ "name": "tibbletime", "version": "0.1.8", "sha256": "18a63vipcw95yk37r490a3a4xag59v7475bch2dizq7nqhfc5wfn", - "depends": ["assertthat", "dplyr", "glue", "hms", "lifecycle", "lubridate", "pillar", "purrr", "Rcpp", "rlang", "tibble", "vctrs", "zoo"] + "depends": ["Rcpp", "assertthat", "dplyr", "glue", "hms", "lifecycle", "lubridate", "pillar", "purrr", "rlang", "tibble", "vctrs", "zoo"] }, "tibblify": { "name": "tibblify", @@ -117989,7 +119177,7 @@ "name": "tidyCDISC", "version": "0.2.1", "sha256": "06pri456bqmvnfna7g092ccd7lqr3bc9gdnw67d7nfz91qwnsny6", - "depends": ["cicerone", "config", "dplyr", "DT", "GGally", "ggcorrplot", "ggplot2", "glue", "golem", "gt", "haven", "IDEAFilter", "plotly", "purrr", "rlang", "rmarkdown", "shiny", "shinyjs", "shinyWidgets", "sjlabelled", "stringr", "survival", "tidyr", "timevis", "tippy"] + "depends": ["DT", "GGally", "IDEAFilter", "cicerone", "config", "dplyr", "ggcorrplot", "ggplot2", "glue", "golem", "gt", "haven", "plotly", "purrr", "rlang", "rmarkdown", "shiny", "shinyWidgets", "shinyjs", "sjlabelled", "stringr", "survival", "tidyr", "timevis", "tippy"] }, "tidyCpp": { "name": "tidyCpp", @@ -118007,7 +119195,7 @@ "name": "tidyEdSurvey", "version": "0.1.3", "sha256": "0vimgaq09dbz78i68ks5p3wiiahl59grdcvbg4bgdq3147pbmd3k", - "depends": ["cli", "dplyr", "EdSurvey", "ggplot2", "lifecycle", "rlang", "tidyselect"] + "depends": ["EdSurvey", "cli", "dplyr", "ggplot2", "lifecycle", "rlang", "tidyselect"] }, "tidyEmoji": { "name": "tidyEmoji", @@ -118019,13 +119207,13 @@ "name": "tidyHeatmap", "version": "1.8.1", "sha256": "19gpp8p3ms60qzny26vx8h7x4zl495ynrfrvf1nndhm2njbx6i4m", - "depends": ["circlize", "ComplexHeatmap", "dendextend", "dplyr", "lifecycle", "magrittr", "patchwork", "purrr", "RColorBrewer", "rlang", "tibble", "tidyr", "viridis"] + "depends": ["ComplexHeatmap", "RColorBrewer", "circlize", "dendextend", "dplyr", "lifecycle", "magrittr", "patchwork", "purrr", "rlang", "tibble", "tidyr", "viridis"] }, "tidyLPA": { "name": "tidyLPA", "version": "1.1.0", "sha256": "1lyd8cx90j49bm65330i57jyimiid75c2pvnzk7dcp6mbmglvimz", - "depends": ["dplyr", "ggplot2", "gtable", "mclust", "mix", "MplusAutomation", "tibble"] + "depends": ["MplusAutomation", "dplyr", "ggplot2", "gtable", "mclust", "mix", "tibble"] }, "tidyMC": { "name": "tidyMC", @@ -118037,7 +119225,7 @@ "name": "tidyREDCap", "version": "1.1.1", "sha256": "1k06bnxvq5k4j005h269n5ivxn1vr2i8nkdg048q8m7vmpanwz4m", - "depends": ["cli", "dplyr", "janitor", "labelVector", "magrittr", "purrr", "REDCapR", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["REDCapR", "cli", "dplyr", "janitor", "labelVector", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "vctrs"] }, "tidyRSS": { "name": "tidyRSS", @@ -118049,7 +119237,7 @@ "name": "tidySEM", "version": "0.2.7", "sha256": "1da0hpapns93a1znlq8gh1nmjczczy4sg4c14kikkxhar1wq4lrk", - "depends": ["bain", "blavaan", "car", "dbscan", "future_apply", "ggplot2", "gtable", "igraph", "lavaan", "Matrix", "MplusAutomation", "nonnest2", "OpenMx", "progressr", "psych", "RANN"] + "depends": ["Matrix", "MplusAutomation", "OpenMx", "RANN", "bain", "blavaan", "car", "dbscan", "future_apply", "ggplot2", "gtable", "igraph", "lavaan", "nonnest2", "progressr", "psych"] }, "tidyUSDA": { "name": "tidyUSDA", @@ -118067,7 +119255,7 @@ "name": "tidybins", "version": "0.1.1", "sha256": "11213qv79qlqlkxh10y3vhidy120f9gyfwj4xqbr6w3wqa5cjg60", - "depends": ["autostats", "badger", "ClusterR", "dplyr", "framecleaner", "ggplot2", "janitor", "lubridate", "magrittr", "OneR", "purrr", "rlang", "rlist", "scales", "strex", "stringr", "tibble", "tidyselect", "xgboost"] + "depends": ["ClusterR", "OneR", "autostats", "badger", "dplyr", "framecleaner", "ggplot2", "janitor", "lubridate", "magrittr", "purrr", "rlang", "rlist", "scales", "strex", "stringr", "tibble", "tidyselect", "xgboost"] }, "tidyboot": { "name": "tidyboot", @@ -118083,8 +119271,8 @@ }, "tidycensus": { "name": "tidycensus", - "version": "1.6.3", - "sha256": "160swqjrcfkqrjpgvyxqqpvm2xnbb1yr0jb89w9mva4mmlnncfj4", + "version": "1.6.5", + "sha256": "08pi8pzxvlprjii11xrfw1kyqpyvx9wh9zkcbw1zh77jxxp40imq", "depends": ["crayon", "dplyr", "httr", "jsonlite", "purrr", "rappdirs", "readr", "rlang", "rvest", "sf", "stringr", "tidyr", "tidyselect", "tigris", "units", "xml2"] }, "tidycharts": { @@ -118095,14 +119283,14 @@ }, "tidyclust": { "name": "tidyclust", - "version": "0.2.1", - "sha256": "0v4hlgmjya6w0jb091qh1hv47xgqx79xvr0ddlz9hnv23rxrrbsf", - "depends": ["cli", "dials", "dplyr", "flexclust", "foreach", "generics", "glue", "hardhat", "modelenv", "parsnip", "prettyunits", "Rfast", "rlang", "rsample", "tibble", "tidyr", "tune", "vctrs"] + "version": "0.2.3", + "sha256": "1z5fhs4ws7cbvsxkwcd4plj968glfing2jgy2hqs1m49di8gjrib", + "depends": ["Rfast", "cli", "dials", "dplyr", "flexclust", "foreach", "generics", "glue", "hardhat", "modelenv", "parsnip", "prettyunits", "rlang", "rsample", "tibble", "tidyr", "tune", "vctrs"] }, "tidycmprsk": { "name": "tidycmprsk", - "version": "1.0.0", - "sha256": "15a3v0lmqnqf3zc0mdjrxpvm02r20fbmh7ma3y1myl00gs7swv8l", + "version": "1.1.0", + "sha256": "1w88zz5wscb25j59hx1bzlmf13mh8wqngkffnhmp6vwn1a53i8lx", "depends": ["broom", "cli", "cmprsk", "dplyr", "ggplot2", "gtsummary", "hardhat", "purrr", "rlang", "stringr", "survival", "tibble", "tidyr"] }, "tidycode": { @@ -118115,7 +119303,7 @@ "name": "tidycomm", "version": "0.4.1", "sha256": "07izzm2ywdjs8z4yfkrrdy0mn54vqc3gnpiymgag8wkxsmxqpz64", - "depends": ["car", "dplyr", "fastDummies", "forcats", "GGally", "ggplot2", "glue", "lm_beta", "lubridate", "magrittr", "MASS", "MBESS", "misty", "pillar", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["GGally", "MASS", "MBESS", "car", "dplyr", "fastDummies", "forcats", "ggplot2", "glue", "lm_beta", "lubridate", "magrittr", "misty", "pillar", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "tidycwl": { "name": "tidycwl", @@ -118135,6 +119323,12 @@ "sha256": "0d7qr1j5ag6ikzq89xc7w9pvsbcp14r0x8ra9v4svx59bg31n94q", "depends": ["clipr", "knitr", "rstudioapi"] }, + "tidydelta": { + "name": "tidydelta", + "version": "0.1.0", + "sha256": "0my8mxk9gx2pk3hjnd50gd6322i1l1ll4z3l4k2mr2nahbdfhbwh", + "depends": ["cli", "dplyr", "numDeriv", "purrr", "rlang", "tibble"] + }, "tidydice": { "name": "tidydice", "version": "1.0.0", @@ -118167,15 +119361,15 @@ }, "tidyfinance": { "name": "tidyfinance", - "version": "0.2.0", - "sha256": "1vch27q03gg447hkndl55fgmwxl0ggq524zbrkslj1cf9dzs9r20", - "depends": ["dplyr", "lifecycle", "lubridate", "purrr", "rlang", "tibble", "tidyr"] + "version": "0.3.0", + "sha256": "01vk9h6p4kk9qh07c8mhwk6267j6p05lblc74zmwxqcfblf0zymn", + "depends": ["dplyr", "lifecycle", "lubridate", "purrr", "rlang", "tidyr"] }, "tidyfit": { "name": "tidyfit", "version": "0.7.1", "sha256": "117x0cmrs0hhp0k4c2c6dx80jjvar7bfgipjzx5d977l4343fhx7", - "depends": ["broom", "crayon", "dials", "dplyr", "furrr", "generics", "magrittr", "MASS", "progressr", "purrr", "rlang", "rsample", "tibble", "tidyr", "vctrs", "yardstick"] + "depends": ["MASS", "broom", "crayon", "dials", "dplyr", "furrr", "generics", "magrittr", "progressr", "purrr", "rlang", "rsample", "tibble", "tidyr", "vctrs", "yardstick"] }, "tidyformula": { "name": "tidyformula", @@ -118207,11 +119401,17 @@ "sha256": "1m6bynwnw1msrzvdmy12w3ympinqpd8j3may3rwmg9941nndjv2d", "depends": ["data_table", "dplyr", "readxl", "tidyr"] }, + "tidygate": { + "name": "tidygate", + "version": "1.0.13", + "sha256": "1ighc3193ifvk3qisxinlgkw3p70ap64w7skspms648x7n89bb4a", + "depends": ["RColorBrewer", "dplyr", "ggplot2", "lifecycle", "magrittr", "plotly", "purrr", "rlang", "scales", "shiny", "stringr", "tibble", "tidyr", "viridis"] + }, "tidygenomics": { "name": "tidygenomics", "version": "0.1.2", "sha256": "1cnwmmmzp9kg4k7iy2kgb22bdllpnz257pv1ahy3l11zy6bl48fc", - "depends": ["dplyr", "fuzzyjoin", "IRanges", "purrr", "Rcpp", "rlang", "tidyr"] + "depends": ["IRanges", "Rcpp", "dplyr", "fuzzyjoin", "purrr", "rlang", "tidyr"] }, "tidygeoRSS": { "name": "tidygeoRSS", @@ -118229,25 +119429,25 @@ "name": "tidygraph", "version": "1.3.1", "sha256": "06mc31yb771midi8lq0zdfymcsm2s4y1mqdxxjz1n24njfxx9hda", - "depends": ["cli", "cpp11", "dplyr", "igraph", "lifecycle", "magrittr", "pillar", "R6", "rlang", "tibble", "tidyr"] + "depends": ["R6", "cli", "cpp11", "dplyr", "igraph", "lifecycle", "magrittr", "pillar", "rlang", "tibble", "tidyr"] }, "tidyheatmaps": { "name": "tidyheatmaps", "version": "0.2.1", "sha256": "158vr8miwmg7i673vk0kpvr79k4ad4ivj8gy612ffqjsg31ws2dn", - "depends": ["dplyr", "pheatmap", "RColorBrewer", "rlang", "tibble", "tidyr"] + "depends": ["RColorBrewer", "dplyr", "pheatmap", "rlang", "tibble", "tidyr"] }, "tidyhte": { "name": "tidyhte", "version": "1.0.2", "sha256": "0c19b7yh09gixgicrr7x65a9vzyvzapr4pv130ysx4jksjcqvdfp", - "depends": ["checkmate", "dplyr", "lifecycle", "magrittr", "progress", "purrr", "R6", "rlang", "SuperLearner", "tibble"] + "depends": ["R6", "SuperLearner", "checkmate", "dplyr", "lifecycle", "magrittr", "progress", "purrr", "rlang", "tibble"] }, "tidyhydat": { "name": "tidyhydat", "version": "0.6.1", "sha256": "0rcb3q17ckp7l7xrjf3r32dlnxm6ykwlk20w5h7amnc2vimjnir9", - "depends": ["cli", "crayon", "DBI", "dbplyr", "dplyr", "httr", "lubridate", "rappdirs", "readr", "rlang", "RSQLite", "tidyr"] + "depends": ["DBI", "RSQLite", "cli", "crayon", "dbplyr", "dplyr", "httr", "lubridate", "rappdirs", "readr", "rlang", "tidyr"] }, "tidyindex": { "name": "tidyindex", @@ -118265,7 +119465,7 @@ "name": "tidylda", "version": "0.0.5", "sha256": "1i5nhb49g5sw5dwha7ia61yp5nnqi9bln35ij0smhrrfjwxz5djp", - "depends": ["dplyr", "generics", "gtools", "Matrix", "mvrsquared", "Rcpp", "RcppArmadillo", "RcppProgress", "RcppThread", "rlang", "stringr", "tibble", "tidyr", "tidytext"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "RcppProgress", "RcppThread", "dplyr", "generics", "gtools", "mvrsquared", "rlang", "stringr", "tibble", "tidyr", "tidytext"] }, "tidylo": { "name": "tidylo", @@ -118293,9 +119493,9 @@ }, "tidync": { "name": "tidync", - "version": "0.3.0", - "sha256": "0w8i8h3rr7mjxbc5zasw6zi9v95z51635pdl91ip4awgkrkyn9f3", - "depends": ["dplyr", "forcats", "magrittr", "ncdf4", "ncmeta", "purrr", "rlang", "RNetCDF", "tibble", "tidyr"] + "version": "0.4.0", + "sha256": "0rm62pcxchknaz0bgfy1fcam33asspbzhwf03jx9vl5vx78ymk04", + "depends": ["CFtime", "RNetCDF", "dplyr", "forcats", "magrittr", "ncdf4", "ncmeta", "purrr", "rlang", "tibble", "tidyr"] }, "tidypaleo": { "name": "tidypaleo", @@ -118337,7 +119537,7 @@ "name": "tidyquant", "version": "1.0.7", "sha256": "1pb7d6x2b8kf16aah1n9kq4il4kp54lcvzd27r5viwdbgvk1sr4h", - "depends": ["alphavantager", "curl", "dplyr", "ggplot2", "httr", "jsonlite", "lazyeval", "lubridate", "magrittr", "PerformanceAnalytics", "purrr", "Quandl", "quantmod", "readr", "readxl", "riingo", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "tidyverse", "timeDate", "timetk", "TTR", "xts"] + "depends": ["PerformanceAnalytics", "Quandl", "TTR", "alphavantager", "curl", "dplyr", "ggplot2", "httr", "jsonlite", "lazyeval", "lubridate", "magrittr", "purrr", "quantmod", "readr", "readxl", "riingo", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "tidyverse", "timeDate", "timetk", "xts"] }, "tidyquery": { "name": "tidyquery", @@ -118365,14 +119565,14 @@ }, "tidyrules": { "name": "tidyrules", - "version": "0.1.5", - "sha256": "04y6pnrp132sckjpp9g8yl0z7glcsx9dcfdpa8r27wsc2g491i63", - "depends": ["assertthat", "magrittr", "partykit", "purrr", "stringr", "tibble"] + "version": "0.2.7", + "sha256": "1h81bffqshasfgjdy9rlvi6jqd89r933p324x172mzcpqkvp484n", + "depends": ["DescTools", "MetricsWeighted", "checkmate", "cli", "data_table", "generics", "glue", "magrittr", "partykit", "pheatmap", "proxy", "purrr", "rlang", "stringr", "tibble", "tidytable"] }, "tidysdm": { "name": "tidysdm", - "version": "0.9.4", - "sha256": "14z6qawbqhs77m842bj1ls9cnb7v35vs6aqbvha0s7kkqlcs1k7l", + "version": "0.9.5", + "sha256": "0vpxral92mnaisz39nkib6mpllwpaw38s9qaly1djyxm8s4lrl48", "depends": ["DALEX", "DALEXtra", "dials", "dplyr", "ggplot2", "lubridate", "magrittr", "maxnet", "parsnip", "patchwork", "recipes", "rlang", "rsample", "sf", "spatialsample", "terra", "tibble", "tidymodels", "tune", "workflows", "workflowsets", "yardstick"] }, "tidyselect": { @@ -118385,7 +119585,7 @@ "name": "tidyseurat", "version": "0.8.0", "sha256": "0xm1vls01d6pcsh824w6li8wp9nf5xrxm9ranrx673vjkjrdwilf", - "depends": ["cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "Matrix", "pillar", "plotly", "purrr", "rlang", "Seurat", "SeuratObject", "stringr", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] + "depends": ["Matrix", "Seurat", "SeuratObject", "cli", "dplyr", "ellipsis", "fansi", "ggplot2", "lifecycle", "magrittr", "pillar", "plotly", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "ttservice", "vctrs"] }, "tidysmd": { "name": "tidysmd", @@ -118397,12 +119597,12 @@ "name": "tidysq", "version": "1.1.3", "sha256": "1k4ws5zymrc93rlh8118xxfgjdwr7g99cyhzjp34abcsip1c3g21", - "depends": ["checkmate", "cli", "crayon", "dplyr", "pillar", "Rcpp", "testthat", "tibble", "vctrs"] + "depends": ["Rcpp", "checkmate", "cli", "crayon", "dplyr", "pillar", "testthat", "tibble", "vctrs"] }, "tidystats": { "name": "tidystats", - "version": "0.6.1", - "sha256": "1cq4xkmjk2q9fds8m21l4dhmr9jivk9n1g199kn3jprjwfydhy96", + "version": "0.6.2", + "sha256": "0y9l72915cq7dkdw7c4l931niq9rdadjvgr8w33s05a5vawg3w40", "depends": ["checkmate", "dplyr", "jsonlite", "purrr", "readr", "stringr", "tibble", "tidyr"] }, "tidystopwords": { @@ -118425,8 +119625,8 @@ }, "tidytable": { "name": "tidytable", - "version": "0.11.0", - "sha256": "09xcjh9vpkz6bcv8rg8g25rpirvsjvbl282ys6y1r1npgb3mrdgm", + "version": "0.11.1", + "sha256": "0mhwfa8zaljnsxm5bkhkfjy3v5a4hlf55qjvy840rgyyw06vfw06", "depends": ["data_table", "glue", "lifecycle", "magrittr", "pillar", "rlang", "tidyselect", "vctrs"] }, "tidyterra": { @@ -118439,7 +119639,7 @@ "name": "tidytext", "version": "0.4.2", "sha256": "0m1dxlrmkany4pjbr2p2m9hzn59gldmznyvs6dcb3zdr5861ix0c", - "depends": ["cli", "dplyr", "generics", "janeaustenr", "lifecycle", "Matrix", "purrr", "rlang", "stringr", "tibble", "tokenizers", "vctrs"] + "depends": ["Matrix", "cli", "dplyr", "generics", "janeaustenr", "lifecycle", "purrr", "rlang", "stringr", "tibble", "tokenizers", "vctrs"] }, "tidytidbits": { "name": "tidytidbits", @@ -118491,15 +119691,15 @@ }, "tidywikidatar": { "name": "tidywikidatar", - "version": "0.5.8", - "sha256": "1f6651nh98assi6wr6k1qp55bspqln83arz6di1fx8p7mlkrh8li", - "depends": ["cli", "DBI", "dplyr", "fs", "glue", "jsonlite", "magrittr", "pool", "progress", "purrr", "rlang", "RSQLite", "stringr", "tibble", "tidyr", "vctrs", "WikidataQueryServiceR", "WikidataR", "WikipediR"] + "version": "0.5.9", + "sha256": "1ff5qlz4h99d7x1pcjcji5li2421mlr55yfv6b32165f1yrkm8qw", + "depends": ["DBI", "RSQLite", "WikidataQueryServiceR", "WikidataR", "cli", "dplyr", "fs", "glue", "httr2", "jsonlite", "magrittr", "pool", "progress", "purrr", "rlang", "stringr", "tibble", "tidyr", "vctrs"] }, "tidyxl": { "name": "tidyxl", "version": "1.0.10", "sha256": "1y8bbll3mhxb2drdraymblzw8gjxym2lrj90fg2z75rn00lnwf8f", - "depends": ["piton", "Rcpp"] + "depends": ["Rcpp", "piton"] }, "tiff": { "name": "tiff", @@ -118523,7 +119723,7 @@ "name": "tigerstats", "version": "0.3.2", "sha256": "0p5z4qh0aznj03rnhk4lpqfkwnsa5zgvj51rddkzligg9zx73xwl", - "depends": ["abd", "ggplot2", "lattice", "manipulate", "MASS", "mosaic", "mosaicData", "rlang"] + "depends": ["MASS", "abd", "ggplot2", "lattice", "manipulate", "mosaic", "mosaicData", "rlang"] }, "tigger": { "name": "tigger", @@ -118569,9 +119769,9 @@ }, "tiledb": { "name": "tiledb", - "version": "0.28.0", - "sha256": "1m4larx3d6si1283hza8pvf0z49rb7h2v3dv5bn9mm6cf82xm5fx", - "depends": ["nanoarrow", "nanotime", "Rcpp", "RcppInt64", "spdl"] + "version": "0.29.0", + "sha256": "1fzmsgn9x4z5ya7rrb83nlwarjswbq5gpjb0lka0xldmdzl9f22j", + "depends": ["Rcpp", "RcppInt64", "nanoarrow", "nanotime", "spdl"] }, "tilegramsR": { "name": "tilegramsR", @@ -118631,13 +119831,13 @@ "name": "timeLineGraphics", "version": "1.0", "sha256": "06i2palpc19g0480d53232fj4jd5j0brhdkmj5vcr6p58qsvhyhm", - "depends": ["berryFunctions", "magick", "pdftools", "R2HTML"] + "depends": ["R2HTML", "berryFunctions", "magick", "pdftools"] }, "timeR": { "name": "timeR", "version": "1.2.0", "sha256": "0lkx2ilbzq29w1c9ssya4f0za0sj7y30y9ml4v3zc21c1la0b6vi", - "depends": ["lubridate", "R6"] + "depends": ["R6", "lubridate"] }, "timeROC": { "name": "timeROC", @@ -118671,8 +119871,8 @@ }, "timeless": { "name": "timeless", - "version": "0.2.1", - "sha256": "061pfg9p15kywzwmg7mfacj9mdrcn7zxlspb7fjfnmcay40v39n7", + "version": "0.2.3", + "sha256": "0wq98ngwn9ajgxmc1ybfgzmxr21jsvjqsc3crrkska7vpzxpjy11", "depends": [] }, "timelineS": { @@ -118695,8 +119895,8 @@ }, "timeplyr": { "name": "timeplyr", - "version": "0.8.1", - "sha256": "0ghr0vrg53fgxmi1w8lx7nfrfxfxhcd4rbi2qrk6pl254n41zwm7", + "version": "0.8.2", + "sha256": "1fcczr3q7c1sqwsk2i4vqy8bpipzvl5f99j1q972c3syzyas0rqa", "depends": ["cheapr", "collapse", "cpp11", "cppdoubles", "data_table", "dplyr", "ggplot2", "lubridate", "pillar", "rlang", "scales", "stringr", "tidyselect", "timechange", "vctrs"] }, "timereg": { @@ -118709,7 +119909,7 @@ "name": "timeseriesdb", "version": "1.0.0-1.1.2", "sha256": "17j1nxpgbfbzmfc6zrgcw68ri9ncslic9qdkxkdpfr2gi1w61bpc", - "depends": ["data_table", "DBI", "jsonlite", "RPostgres", "xts"] + "depends": ["DBI", "RPostgres", "data_table", "jsonlite", "xts"] }, "timetk": { "name": "timetk", @@ -118745,7 +119945,7 @@ "name": "tinkr", "version": "0.2.0", "sha256": "068ym4a0gwayd6a86zq6428j8gkmvxgm7hk0crbjp0lp9cz85dzq", - "depends": ["commonmark", "glue", "magrittr", "purrr", "R6", "xml2", "xslt", "yaml"] + "depends": ["R6", "commonmark", "glue", "magrittr", "purrr", "xml2", "xslt", "yaml"] }, "tinsel": { "name": "tinsel", @@ -118769,18 +119969,18 @@ "name": "tinyProject", "version": "0.6.1", "sha256": "0cflnfp5mib3j1y3n5yvi867h5a7z6xr6163gq9y9b6nrl2skxfk", - "depends": ["brew", "R_utils"] + "depends": ["R_utils", "brew"] }, "tinyarray": { "name": "tinyarray", "version": "2.4.2", "sha256": "188zc58yb68jyw3dw7y323slnlgl7872icrwf3zl6s7rm44dmljc", - "depends": ["BiocManager", "clusterProfiler", "dplyr", "ggplot2", "Hmisc", "limma", "patchwork", "pheatmap", "stringr", "survival", "survminer", "tibble"] + "depends": ["BiocManager", "Hmisc", "clusterProfiler", "dplyr", "ggplot2", "limma", "patchwork", "pheatmap", "stringr", "survival", "survminer", "tibble"] }, "tinycodet": { "name": "tinycodet", - "version": "0.5.0", - "sha256": "1zw9f0586mf78hs115l6bib6c3r1d5n8c9mgyxhqc52vdxv0cqhn", + "version": "0.5.3", + "sha256": "0pc0dlp5s96g37bm1d8fy64rmg8ji4ysr98wd6yddx4j3vghlm9d", "depends": ["Rcpp", "stringi"] }, "tinylabels": { @@ -118789,11 +119989,17 @@ "sha256": "01pvnirma3wzfqnnz8zvyqajjyysjm3sd6813bgdhz199lcg7hhz", "depends": [] }, + "tinyplot": { + "name": "tinyplot", + "version": "0.2.0", + "sha256": "0cd934pzrfg49f1l4pm2g8r83h8zzid23brh2jyl5ydlmfks1zmy", + "depends": [] + }, "tinyscholar": { "name": "tinyscholar", "version": "0.1.7", "sha256": "0cd9xbm1gk0v241fqa42hly40vkqb6hcvi8jp9iqq8sgmrs33adh", - "depends": ["curl", "dplyr", "ggplot2", "gt", "jsonlite", "magrittr", "purrr", "R_utils", "rlang", "rvest", "stringr", "xml2"] + "depends": ["R_utils", "curl", "dplyr", "ggplot2", "gt", "jsonlite", "magrittr", "purrr", "rlang", "rvest", "stringr", "xml2"] }, "tinysnapshot": { "name": "tinysnapshot", @@ -118827,8 +120033,8 @@ }, "tinytex": { "name": "tinytex", - "version": "0.51", - "sha256": "1sn8fkmz01x0igsh7ynkqsl5h50ccl4xf8025a87i3mmni8kn4dv", + "version": "0.52", + "sha256": "0fji3yca7qpxpzdd8hy55v0g40jny41qvhz8d64gwlnxkwxp2alk", "depends": ["xfun"] }, "tinythemes": { @@ -118847,7 +120053,7 @@ "name": "tip", "version": "0.1.0", "sha256": "11khhkszd5a81q0h6acx5rvp1k97qj1srcvz2jilwf3v6nrz7daz", - "depends": ["changepoint", "doParallel", "foreach", "GGally", "ggplot2", "igraph", "LaplacesDemon", "mniw", "network", "rlang"] + "depends": ["GGally", "LaplacesDemon", "changepoint", "doParallel", "foreach", "ggplot2", "igraph", "mniw", "network", "rlang"] }, "tipa": { "name": "tipa", @@ -118865,7 +120071,7 @@ "name": "tipmap", "version": "0.5.2", "sha256": "11wznnhv1jf0g72ahdcxvxm4n3kpdbx6ivdx9cb0c5gdyjh482ss", - "depends": ["assertthat", "dplyr", "furrr", "future", "ggplot2", "magrittr", "purrr", "RBesT"] + "depends": ["RBesT", "assertthat", "dplyr", "furrr", "future", "ggplot2", "magrittr", "purrr"] }, "tippy": { "name": "tippy", @@ -118881,9 +120087,9 @@ }, "tipsae": { "name": "tipsae", - "version": "1.0.1", - "sha256": "1ay67c3hlfzzflzcjwh9jqmy70jbvxp0bri1cc8vvs3ipdinygg9", - "depends": ["BH", "ggplot2", "ggpubr", "nlme", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rstan", "shiny", "sp", "StanHeaders"] + "version": "1.0.2", + "sha256": "14x5g5qc1lnc2p0vkmf8vs7gkjlbkahgaf38j9q23xx8dizym6w9", + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "ggplot2", "ggpubr", "nlme", "rstan", "shiny", "sp"] }, "tis": { "name": "tis", @@ -118959,8 +120165,8 @@ }, "tm": { "name": "tm", - "version": "0.7-13", - "sha256": "1d0xczmmfsj82183nygvb4f9h1qbydz763b3jlzxb6ns8pi6q9p5", + "version": "0.7-14", + "sha256": "103n9m9vh1s1fn2wlab5qm4i1dx4wq0ffl7v69mwa6mvdklfw7ks", "depends": ["BH", "NLP", "Rcpp", "slam", "xml2"] }, "tm_plugin_alceste": { @@ -118979,7 +120185,7 @@ "name": "tm.plugin.europresse", "version": "1.4", "sha256": "03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx", - "depends": ["NLP", "tm", "XML"] + "depends": ["NLP", "XML", "tm"] }, "tm_plugin_factiva": { "name": "tm.plugin.factiva", @@ -118991,7 +120197,7 @@ "name": "tm.plugin.koRpus", "version": "0.4-2", "sha256": "132w4rji68y1ddy93844n2ks5z059a16lqy71vcrxm6wcdn2w3hq", - "depends": ["koRpus", "NLP", "sylly", "tm"] + "depends": ["NLP", "koRpus", "sylly", "tm"] }, "tm_plugin_lexisnexis": { "name": "tm.plugin.lexisnexis", @@ -119001,9 +120207,9 @@ }, "tm_plugin_mail": { "name": "tm.plugin.mail", - "version": "0.2-2", - "sha256": "03d0y19yn4akkcjlyc17rb2r9nv8rfnqx1l8i5gp07w5s8czvfxf", - "depends": ["NLP", "tm"] + "version": "0.3-0", + "sha256": "02gbpdqi9cqk0na7ali1wwjapnf497hwv3k8mx354496pcrbi8m5", + "depends": ["NLP", "reticulate", "tm"] }, "tm1r": { "name": "tm1r", @@ -119015,19 +120221,19 @@ "name": "tmap", "version": "3.3-4", "sha256": "1xxa9ya1gci4ys5z00v95kp39rq12vd8kppj8j8n1a913kbbqrn9", - "depends": ["abind", "classInt", "htmltools", "htmlwidgets", "leafem", "leaflet", "leafsync", "RColorBrewer", "rlang", "sf", "stars", "tmaptools", "units", "viridisLite", "widgetframe"] + "depends": ["RColorBrewer", "abind", "classInt", "htmltools", "htmlwidgets", "leafem", "leaflet", "leafsync", "rlang", "sf", "stars", "tmaptools", "units", "viridisLite", "widgetframe"] }, "tmaptools": { "name": "tmaptools", "version": "3.1-1", "sha256": "0bal3czrdr93qig8s5cf5szld5vjbbks67rismfhlkmlgw6wp2gx", - "depends": ["dichromat", "lwgeom", "magrittr", "RColorBrewer", "sf", "stars", "units", "viridisLite", "XML"] + "depends": ["RColorBrewer", "XML", "dichromat", "lwgeom", "magrittr", "sf", "stars", "units", "viridisLite"] }, "tmbstan": { "name": "tmbstan", "version": "1.0.91", "sha256": "0wsa1999iaxzzbh27xmw8qfka1hzfi81kf6p3zlhfq8299vrg4py", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "StanHeaders", "TMB"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "TMB", "rstan"] }, "tmcn": { "name": "tmcn", @@ -119039,13 +120245,13 @@ "name": "tmle", "version": "2.0.1.1", "sha256": "1xl71md4rld9yk0z47qki1pg4mhgblmc9adqzwd2157dfvqlh94c", - "depends": ["glmnet", "SuperLearner"] + "depends": ["SuperLearner", "glmnet"] }, "tmod": { "name": "tmod", "version": "0.50.13", "sha256": "160aibvkz4ilyaig3bvkam6g96cngaynwsfrzh6vpq9xyraqxpix", - "depends": ["beeswarm", "ggplot2", "ggrepel", "gplots", "pheatmap", "plotwidgets", "purrr", "RColorBrewer", "rlang", "tagcloud", "tibble", "tidyr", "tidyselect", "XML"] + "depends": ["RColorBrewer", "XML", "beeswarm", "ggplot2", "ggrepel", "gplots", "pheatmap", "plotwidgets", "purrr", "rlang", "tagcloud", "tibble", "tidyr", "tidyselect"] }, "tmplate": { "name": "tmplate", @@ -119069,7 +120275,7 @@ "name": "tmt", "version": "0.3.4-0", "sha256": "0n0wrgrf99bvlwbgjgx3sa8icmjqy1swc0ck3l1yja228qc26179", - "depends": ["ggplot2", "Rcpp", "rlang"] + "depends": ["Rcpp", "ggplot2", "rlang"] }, "tmvmixnorm": { "name": "tmvmixnorm", @@ -119087,7 +120293,7 @@ "name": "tmvtnorm", "version": "1.6", "sha256": "1fhvisddn3x4li2q12c3hss0cj735c0iq32c9cw646ni619jr6rd", - "depends": ["gmm", "Matrix", "mvtnorm"] + "depends": ["Matrix", "gmm", "mvtnorm"] }, "tmvtnsim": { "name": "tmvtnsim", @@ -119139,9 +120345,9 @@ }, "tok": { "name": "tok", - "version": "0.1.1", - "sha256": "1rbn5b6gc5qx8d8rggxbvcs2phrdxj9r72sl6l75vpn4hh4ffpi6", - "depends": ["cli", "R6"] + "version": "0.1.3", + "sha256": "0grnqf0k8vlyfsy8nwaawbyd91l6j8kyvny3cnn8xjgws0pyslli", + "depends": ["R6", "cli"] }, "tokenbrowser": { "name": "tokenbrowser", @@ -119183,7 +120389,7 @@ "name": "toolStability", "version": "0.1.2", "sha256": "032czpmr484jm10i0pz9f3jyzkqrz5s11q2nxrhk8jrlg0s427lr", - "depends": ["data_table", "dplyr", "nortest", "Rdpack"] + "depends": ["Rdpack", "data_table", "dplyr", "nortest"] }, "toolbox": { "name": "toolbox", @@ -119205,8 +120411,8 @@ }, "topChef": { "name": "topChef", - "version": "0.1.0", - "sha256": "13gqifd3l47pand0bf0993x6fhm9vgj3l95lkc055rq3ffzpdyl4", + "version": "0.2.0", + "sha256": "0nad6a8iqgpyjj8hxj9lk48y4dvqiak267ikmjgv1avwayc4sa16", "depends": ["dplyr", "tidyr"] }, "topdowntimeratio": { @@ -119221,10 +120427,16 @@ "sha256": "195yly7r14cpavbbr02iq3lqfb0gcx5cngfigivnid1rk45wv7bz", "depends": ["slam", "topicmodels"] }, + "topiclabels": { + "name": "topiclabels", + "version": "0.1.0", + "sha256": "0x56bgm609xzx844j0qamyix3nr8ziqzj5rd33qgj023gfgrhg8i", + "depends": ["checkmate", "httr", "jsonlite", "progress"] + }, "topicmodels": { "name": "topicmodels", - "version": "0.2-16", - "sha256": "01g9avk0ldqnz15n8112vad31c1n7r6rih5dh6x3383vvmjrqp0d", + "version": "0.2-17", + "sha256": "138nsmwgg3npk3i78xagpm6fw1g4ixmikan1jmv3066kymgy2rrq", "depends": ["modeltools", "slam", "tm"] }, "topicmodels_etm": { @@ -119243,13 +120455,13 @@ "name": "topoDistance", "version": "1.0.2", "sha256": "1n6108giihc4aa1871m558s2z96m766ysvhak5b6zg1bnvpdj0l8", - "depends": ["gdistance", "plotly", "raster", "RColorBrewer", "scales", "sp"] + "depends": ["RColorBrewer", "gdistance", "plotly", "raster", "scales", "sp"] }, "topologyGSA": { "name": "topologyGSA", "version": "1.5.0", "sha256": "1pzyn916wllmry2gzwp6fhhcd3fjz7k4jlgsgqs3c2b2g0vqknm2", - "depends": ["fields", "graph", "gRbase", "igraph", "qpgraph"] + "depends": ["fields", "gRbase", "graph", "igraph", "qpgraph"] }, "toposort": { "name": "toposort", @@ -119259,8 +120471,8 @@ }, "topr": { "name": "topr", - "version": "2.0.1", - "sha256": "19n18m370dl8hginswwgamr4daj7ci4spjgdli3zk5glcqqq9a45", + "version": "2.0.2", + "sha256": "1hqljylwja01jn8zhkrkcyy4pza7pvmfibgzjvy9q3lbprf278zr", "depends": ["dplyr", "egg", "enshuman", "ggplot2", "ggrepel", "gridExtra", "magrittr", "scales", "stringr", "tidyr"] }, "toprdata": { @@ -119277,15 +120489,15 @@ }, "tor": { "name": "tor", - "version": "1.1.2", - "sha256": "1s34hzw3a4cm9gk85fcxgxwmn2xc7njs1iw1snd91id3gdl6vppx", + "version": "1.1.3", + "sha256": "0azizqb37gh8k7n1jkmxwh7923pyhjp0srdpxyf45w3g69clshaz", "depends": ["fs", "readr", "rlang", "tibble"] }, "torch": { "name": "torch", "version": "0.13.0", "sha256": "1vy855ahji98np2q5j5fag2zcnv4ki5mysxwg3y5kdns6mifd5ns", - "depends": ["bit64", "callr", "cli", "coro", "desc", "ellipsis", "glue", "jsonlite", "magrittr", "R6", "Rcpp", "rlang", "safetensors", "withr"] + "depends": ["R6", "Rcpp", "bit64", "callr", "cli", "coro", "desc", "ellipsis", "glue", "jsonlite", "magrittr", "rlang", "safetensors", "withr"] }, "torchaudio": { "name": "torchaudio", @@ -119295,8 +120507,8 @@ }, "torchdatasets": { "name": "torchdatasets", - "version": "0.3.0", - "sha256": "1mq87sgy9v1526iy03zpslkjxx7379q6x9dqs0nslvvfwk9sry4q", + "version": "0.3.1", + "sha256": "1lh0yjv18bjjdwc8pdl248vsbwm5y9xkv4dhsa1kbk01xmlvk3vy", "depends": ["fs", "pins", "stringr", "torch", "torchvision", "withr", "zip"] }, "torchopt": { @@ -119315,7 +120527,7 @@ "name": "torchvisionlib", "version": "0.5.0", "sha256": "1n9gvidi3lvcq730c70mzh94w42asv903708fqyqp2wrs68884na", - "depends": ["glue", "Rcpp", "rlang", "torch", "withr"] + "depends": ["Rcpp", "glue", "rlang", "torch", "withr"] }, "tornado": { "name": "tornado", @@ -119327,7 +120539,7 @@ "name": "tosca", "version": "0.3-2", "sha256": "1z8svczy93lpdj7n1gk9jz8jgzkjsf886ldlkgq1mfi1j6m8557y", - "depends": ["data_table", "htmltools", "lda", "lubridate", "quanteda", "RColorBrewer", "stringr", "tm", "WikipediR"] + "depends": ["RColorBrewer", "WikipediR", "data_table", "htmltools", "lda", "lubridate", "quanteda", "stringr", "tm"] }, "toscmask": { "name": "toscmask", @@ -119337,9 +120549,9 @@ }, "toscutil": { "name": "toscutil", - "version": "2.7.4", - "sha256": "07b89f43d9dm0lyfc0fd15bv2gxqmzz3ly9gzggix04v8zxivm2i", - "depends": ["languageserver", "rlang"] + "version": "2.8.0", + "sha256": "1k2p3kd29bi79lfaiinl96jbi3nfj9lfx2fgzvpbhxzgzfkxpg09", + "depends": ["rlang"] }, "tosr": { "name": "tosr", @@ -119369,7 +120581,7 @@ "name": "tourr", "version": "1.2.0", "sha256": "1sbaf94ms03jw5bc04xf974zp7zgfdx9xv8yl4hch82kfmfcdmxy", - "depends": ["dplyr", "MASS", "tibble"] + "depends": ["MASS", "dplyr", "tibble"] }, "toweranNA": { "name": "toweranNA", @@ -119381,19 +120593,19 @@ "name": "toxEval", "version": "1.3.2", "sha256": "1dyrbvb2l7bdz6d0lph7s8m3ydy6wz9k01qd9ilvkdqcf3y05ih0", - "depends": ["dplyr", "DT", "ggplot2", "leaflet", "magrittr", "RColorBrewer", "readxl", "shiny", "shinyAce", "shinycssloaders", "shinydashboard", "tidyr"] + "depends": ["DT", "RColorBrewer", "dplyr", "ggplot2", "leaflet", "magrittr", "readxl", "shiny", "shinyAce", "shinycssloaders", "shinydashboard", "tidyr"] }, "toxSummary": { "name": "toxSummary", "version": "1.0.0", "sha256": "1pxd8sgbby2n6bpcfxng0mj60xx5mx5m0svmqn355cl49vfccsbg", - "depends": ["cicerone", "data_table", "DBI", "dplyr", "DT", "flextable", "fs", "ggiraph", "ggplot2", "htmltools", "magrittr", "patchwork", "rlang", "RSQLite", "scales", "shiny", "shinycssloaders", "shinydisconnect", "stringr"] + "depends": ["DBI", "DT", "RSQLite", "cicerone", "data_table", "dplyr", "flextable", "fs", "ggiraph", "ggplot2", "htmltools", "magrittr", "patchwork", "rlang", "scales", "shiny", "shinycssloaders", "shinydisconnect", "stringr"] }, "toxpiR": { "name": "toxpiR", "version": "1.2.1", "sha256": "0n6x87gyzxsib267h0gs5b4sdkwmgjpgqzipfhlrjsnxq55q6599", - "depends": ["BiocGenerics", "pryr", "rlang", "S4Vectors", "tidyr"] + "depends": ["BiocGenerics", "S4Vectors", "pryr", "rlang", "tidyr"] }, "tpAUC": { "name": "tpAUC", @@ -119423,7 +120635,7 @@ "name": "tpn", "version": "1.8", "sha256": "1jhddrgkzlwmljqzy4hgday4ydyc76fskk2ahnz9x2abfm21dx7g", - "depends": ["moments", "pracma", "RBE3", "skewMLRM", "VGAM"] + "depends": ["RBE3", "VGAM", "moments", "pracma", "skewMLRM"] }, "tpr": { "name": "tpr", @@ -119453,7 +120665,7 @@ "name": "tracee", "version": "0.0.4", "sha256": "0ny6769zdl2i5y3fy3ysww91i5s0n86rcciaalryg6ms18989x0r", - "depends": ["data_table", "flextable", "ggplot2", "gridExtra", "NMdata"] + "depends": ["NMdata", "data_table", "flextable", "ggplot2", "gridExtra"] }, "tracenma": { "name": "tracenma", @@ -119471,7 +120683,7 @@ "name": "tracerer", "version": "2.2.3", "sha256": "0jqf0p0j0g4naspgg9k7jxslwcdqwv7mxca41wyffrgglgya8rci", - "depends": ["jsonlite", "Rcpp", "testit"] + "depends": ["Rcpp", "jsonlite", "testit"] }, "tracheideR": { "name": "tracheideR", @@ -119481,15 +120693,15 @@ }, "track2KBA": { "name": "track2KBA", - "version": "1.1.1", - "sha256": "0lhx18vilxlac3z9vrwjcxjvinkdpp1njkvg82dyz1sqby3fa9f8", - "depends": ["adehabitatHR", "dplyr", "foreach", "geosphere", "ggplot2", "lubridate", "magrittr", "maps", "Matching", "move", "purrr", "raster", "rlang", "sf", "sp", "tidyr"] + "version": "1.1.2", + "sha256": "1y5mj2qakwvgxh0s8dli9d2i97g1y19k0v3q20zgj7j3wx7x8fw4", + "depends": ["Matching", "adehabitatHR", "dplyr", "foreach", "geosphere", "ggplot2", "lubridate", "magrittr", "maps", "move", "purrr", "raster", "rlang", "sf", "sp", "tidyr"] }, "trackdem": { "name": "trackdem", "version": "0.7.2", "sha256": "0i3zjdykdv92b4g7gvr83rmx8cvwmm7w5chbxr6si08zw0jipzzn", - "depends": ["MASS", "neuralnet", "png", "raster", "Rcpp", "RcppArmadillo", "shiny"] + "depends": ["MASS", "Rcpp", "RcppArmadillo", "neuralnet", "png", "raster", "shiny"] }, "trackdf": { "name": "trackdf", @@ -119507,19 +120719,19 @@ "name": "trackeR", "version": "1.6.0", "sha256": "06fyki3w73hdmwlsmp6k5g5x6vs60ysznji3bgi9kpphcbn85frg", - "depends": ["fda", "foreach", "ggmap", "ggplot2", "ggridges", "gridExtra", "gtable", "jsonlite", "leaflet", "raster", "RSQLite", "scam", "sp", "xml2", "zoo"] + "depends": ["RSQLite", "fda", "foreach", "ggmap", "ggplot2", "ggridges", "gridExtra", "gtable", "jsonlite", "leaflet", "raster", "scam", "sp", "xml2", "zoo"] }, "trackeRapp": { "name": "trackeRapp", "version": "1.2", "sha256": "1y6n9hgzybz5860qpzj9rdb9yl4k6b9h13d91fqn3qarpnx9n5qr", - "depends": ["changepoint", "colorspace", "DT", "foreach", "mapdeck", "mgcv", "plotly", "sf", "shiny", "shinydashboard", "shinyjs", "shinyWidgets", "trackeR", "V8", "zoo"] + "depends": ["DT", "V8", "changepoint", "colorspace", "foreach", "mapdeck", "mgcv", "plotly", "sf", "shiny", "shinyWidgets", "shinydashboard", "shinyjs", "trackeR", "zoo"] }, "tractor_base": { "name": "tractor.base", "version": "3.4.2", "sha256": "12mp5x6c7c82a4z7p39cb478kwwf6lkrgbis6ak00yibsd3n6na3", - "depends": ["ore", "reportr", "RNifti", "shades"] + "depends": ["RNifti", "ore", "reportr", "shades"] }, "trade": { "name": "trade", @@ -119531,7 +120743,7 @@ "name": "tradepolicy", "version": "0.7.0", "sha256": "0nil9yd32dlafz7493i8vbv0q8np7drj502xm4nznq4ql9px46fh", - "depends": ["broom", "dplyr", "fixest", "Formula", "ggplot2", "knitr", "magrittr", "msm", "purrr", "sandwich", "tidyr"] + "depends": ["Formula", "broom", "dplyr", "fixest", "ggplot2", "knitr", "magrittr", "msm", "purrr", "sandwich", "tidyr"] }, "tradestatistics": { "name": "tradestatistics", @@ -119549,13 +120761,13 @@ "name": "trainR", "version": "0.0.1", "sha256": "0wmxhw8yxkxpw08jma3r0zy7dhsrkbh5wjvd3izp5gf9dn9533cd", - "depends": ["dplyr", "glue", "lubridate", "magrittr", "purrr", "RCurl", "stringr", "tibble", "tidyr", "usethis", "xml2"] + "depends": ["RCurl", "dplyr", "glue", "lubridate", "magrittr", "purrr", "stringr", "tibble", "tidyr", "usethis", "xml2"] }, "traineR": { "name": "traineR", "version": "2.2.0", "sha256": "0a07l38k18x97yzqh8qcaza4fac0r2ngf3588v3nrvhcm3wz70az", - "depends": ["ada", "adabag", "dplyr", "e1071", "gbm", "ggplot2", "glmnet", "kknn", "MASS", "neuralnet", "nnet", "randomForest", "ROCR", "rpart", "stringr", "xgboost"] + "depends": ["MASS", "ROCR", "ada", "adabag", "dplyr", "e1071", "gbm", "ggplot2", "glmnet", "kknn", "neuralnet", "nnet", "randomForest", "rpart", "stringr", "xgboost"] }, "trainsplit": { "name": "trainsplit", @@ -119583,8 +120795,8 @@ }, "traj": { "name": "traj", - "version": "2.1.0", - "sha256": "157v3bhb10x0fndx64pq3m5ddmwj070j1ca3d8ff64kpkfbxdgd3", + "version": "2.2.0", + "sha256": "1pv47ww443i290yjiqwx3bk1kynsv4kzhpq65mspbjdy61ilq5aq", "depends": ["cluster", "psych"] }, "trajectories": { @@ -119607,27 +120819,27 @@ }, "tram": { "name": "tram", - "version": "1.0-4", - "sha256": "04hbvsqawfqvfgmzbnbwxy6jlpnglpgmrnl9gp5kb6in36as92jz", - "depends": ["basefun", "Formula", "Matrix", "mlt", "multcomp", "mvtnorm", "sandwich", "survival", "variables"] + "version": "1.0-5", + "sha256": "12466rha6h7i034pwqjl37isga6lzxagjj7ppaffqg3aajzdlzss", + "depends": ["Formula", "Matrix", "basefun", "mlt", "multcomp", "mvtnorm", "sandwich", "survival", "variables"] }, "tramME": { "name": "tramME", - "version": "1.0.5", - "sha256": "1rfs38v0w2rxldxngbc1d6118cjnc8ad4zn2csqk8bg882b1yn18", - "depends": ["alabama", "basefun", "coneproj", "lme4", "MASS", "Matrix", "mgcv", "mlt", "mvtnorm", "nlme", "numDeriv", "RcppEigen", "TMB", "tram", "variables"] + "version": "1.0.6", + "sha256": "00i0813czlwlb6lxsljhsp644mpz3zwcy068lb1z7qkxncic377d", + "depends": ["MASS", "Matrix", "RcppEigen", "TMB", "alabama", "basefun", "coneproj", "mgcv", "mlt", "mvtnorm", "nlme", "numDeriv", "reformulas", "tram", "variables"] }, "tramicp": { "name": "tramicp", "version": "0.0-2", "sha256": "1d5dj695q16il35pmfi6kb0m78mdjj5gsirqb2sd74jwgj32qy5b", - "depends": ["basefun", "coin", "cotram", "dHSIC", "MASS", "mlt", "multcomp", "ranger", "sandwich", "survival", "tram", "variables"] + "depends": ["MASS", "basefun", "coin", "cotram", "dHSIC", "mlt", "multcomp", "ranger", "sandwich", "survival", "tram", "variables"] }, "tramnet": { "name": "tramnet", "version": "0.0-8", "sha256": "19hx2hn8m5abfzp4sm0myhxlx9hp2rl7dry5izxsfjjls3h8z1n4", - "depends": ["basefun", "CVXR", "lhs", "mlr", "mlrMBO", "mlt", "ParamHelpers", "sandwich", "smoof", "tram"] + "depends": ["CVXR", "ParamHelpers", "basefun", "lhs", "mlr", "mlrMBO", "mlt", "sandwich", "smoof", "tram"] }, "trampoline": { "name": "trampoline", @@ -119645,7 +120857,7 @@ "name": "tranSurv", "version": "1.2.2", "sha256": "17rvzjcn76z5niw1jappiadbkf66a9x0m7p3251lgb7qrnvpx3gk", - "depends": ["rootSolve", "SQUAREM", "survival", "truncSP"] + "depends": ["SQUAREM", "rootSolve", "survival", "truncSP"] }, "transPlotR": { "name": "transPlotR", @@ -119657,13 +120869,13 @@ "name": "transfR", "version": "1.0.11", "sha256": "1qmkqn0gl4d6c0j1f07nmlv1gxh6in7d21dlp80ilmnaqyhb1fnj", - "depends": ["doParallel", "foreach", "Rdpack", "sf", "stars", "units"] + "depends": ["Rdpack", "doParallel", "foreach", "sf", "stars", "units"] }, "transforEmotion": { "name": "transforEmotion", "version": "0.1.4", "sha256": "0vm6jls2whqkr1x7gwa9h6x1phng908z9qyfmpjr6nrykkwmk5va", - "depends": ["dplyr", "googledrive", "LSAfun", "Matrix", "pbapply", "remotes", "reticulate"] + "depends": ["LSAfun", "Matrix", "dplyr", "googledrive", "pbapply", "remotes", "reticulate"] }, "transform_hazards": { "name": "transform.hazards", @@ -119701,6 +120913,12 @@ "sha256": "12jd0dzbhliajg2x88kqwxpvrd1xy64sd551rsvbklfc3n7fqx09", "depends": ["glue", "jsonlite"] }, + "translit_uk": { + "name": "translit.uk", + "version": "1.0.0", + "sha256": "1c8pp0b23kmrnlbmkcx8ws5c2bcj1p3vbrz9cxkphvvai5b0rkci", + "depends": [] + }, "transmdl": { "name": "transmdl", "version": "0.1.0", @@ -119723,7 +120941,7 @@ "name": "transport", "version": "0.15-2", "sha256": "0pf0lza2qf0alwphiy978fyp58k3lz5i44kcw86a3rrf7cpf4rwa", - "depends": ["data_table", "Rcpp", "RcppEigen"] + "depends": ["Rcpp", "RcppEigen", "data_table"] }, "transreg": { "name": "transreg", @@ -119753,25 +120971,31 @@ "name": "traveltimeR", "version": "1.2.1", "sha256": "1029hxdgzapx0irvq5ir18fpdm5cyj5wjvl1h88x3g1rs88pvfzi", - "depends": ["data_table", "httr", "jsonlite", "RProtoBuf"] + "depends": ["RProtoBuf", "data_table", "httr", "jsonlite"] }, "trawl": { "name": "trawl", "version": "0.2.2", "sha256": "1a8cvkmw7bmdljggfv26n2nrad6974spga2yw5386k70ghq56mz3", - "depends": ["DEoptim", "ggplot2", "ggpubr", "MASS", "rootSolve", "Runuran", "squash", "TSA"] + "depends": ["DEoptim", "MASS", "Runuran", "TSA", "ggplot2", "ggpubr", "rootSolve", "squash"] + }, + "trdist": { + "name": "trdist", + "version": "1.0.1", + "sha256": "11j0giccn5vyr97c44nvgy678qckajmn0lq9li4pf2swf18v3ji7", + "depends": [] }, "treasury": { "name": "treasury", - "version": "0.1.0", - "sha256": "1h87pwzd474bw2rsq2cvv2jw2nkr9lxjnc5grhqsq6vd2hlkwch5", - "depends": ["httr2", "rlang", "xml2"] + "version": "0.2.0", + "sha256": "0dg7yik152gikxn35khcrc098li6n3ppb7d78cwmxl2ikvzcgbbm", + "depends": ["httr2", "readxl", "rlang", "tidyr", "xml2"] }, "treats": { "name": "treats", "version": "1.0", "sha256": "16ahw46wkjhvxhkiy4313ky9vvzjrg2bhxw1pz0j4hasdkd9xq1s", - "depends": ["ape", "dispRity", "MASS", "rgl"] + "depends": ["MASS", "ape", "dispRity", "rgl"] }, "tree": { "name": "tree", @@ -119801,7 +121025,7 @@ "name": "treeDA", "version": "0.0.5", "sha256": "0rdqvjj16w7ykpxd6m800h4zv79y9c1phhkl14xy10gbi2cqh10g", - "depends": ["ape", "ggplot2", "gtable", "Matrix", "mvtnorm", "phyloseq", "reshape2", "sparseLDA"] + "depends": ["Matrix", "ape", "ggplot2", "gtable", "mvtnorm", "phyloseq", "reshape2", "sparseLDA"] }, "treeDbalance": { "name": "treeDbalance", @@ -119825,7 +121049,7 @@ "name": "treebase", "version": "0.1.5", "sha256": "07rggigdgjbmz9wvbkxs6xcwg6k53zb4j4rvlfrgb5b4mq44s0wj", - "depends": ["ape", "httr", "RCurl", "XML"] + "depends": ["RCurl", "XML", "ape", "httr"] }, "treedata_table": { "name": "treedata.table", @@ -119843,7 +121067,7 @@ "name": "treediff", "version": "0.2.1", "sha256": "00yhqbxgz35fnz940zkqr0kylzqb55l1yhilphw1yzks3wmsd4id", - "depends": ["adjclust", "BiocGenerics", "csaw", "data_table", "dplyr", "HiCDOC", "InteractionSet", "limma", "purrr", "reshape2", "rlang", "SummarizedExperiment", "testthat"] + "depends": ["BiocGenerics", "HiCDOC", "InteractionSet", "SummarizedExperiment", "adjclust", "csaw", "data_table", "dplyr", "limma", "purrr", "reshape2", "rlang", "testthat"] }, "treefit": { "name": "treefit", @@ -119861,7 +121085,7 @@ "name": "treemap", "version": "2.4-4", "sha256": "1h3pas3kn8zrpdpvp9vs745q94kixw5lxkbq74l5lh0n3wkqnnn5", - "depends": ["colorspace", "data_table", "ggplot2", "gridBase", "igraph", "RColorBrewer", "shiny"] + "depends": ["RColorBrewer", "colorspace", "data_table", "ggplot2", "gridBase", "igraph", "shiny"] }, "treemapify": { "name": "treemapify", @@ -119873,13 +121097,25 @@ "name": "treenomial", "version": "1.1.4", "sha256": "0vx5x7078ccn2bsmcxdls3ymmc7jx71xzq0va0n7gyw36gi7k3nn", - "depends": ["ape", "Rcpp", "RcppArmadillo", "RcppThread"] + "depends": ["Rcpp", "RcppArmadillo", "RcppThread", "ape"] }, "treeshap": { "name": "treeshap", "version": "0.3.1", "sha256": "1ipj5k9dgrnbny0z2ydsdvdzg5ba53alyidnh90a08y2dhd4wffs", - "depends": ["data_table", "ggplot2", "Rcpp"] + "depends": ["Rcpp", "data_table", "ggplot2"] + }, + "treesitter": { + "name": "treesitter", + "version": "0.1.0", + "sha256": "1yppwpayv4krwyxzqcg9aisdlascksym603ad0a9qpjrsivqyhh9", + "depends": ["R6", "cli", "rlang", "vctrs"] + }, + "treesitter_r": { + "name": "treesitter.r", + "version": "1.0.1", + "sha256": "1bxliv544w2aa033r4nhqzs5cmsiriymfcxwcc76v05nm82dncim", + "depends": [] }, "treesliceR": { "name": "treesliceR", @@ -119891,7 +121127,7 @@ "name": "treespace", "version": "1.1.4.3", "sha256": "1f5kcydlnbbwf2q2rgb64y3i7x9p7prcw1xc5pjk8wqp2zyr0ijj", - "depends": ["ade4", "adegenet", "adegraphics", "ape", "combinat", "distory", "fields", "htmlwidgets", "MASS", "phangorn", "phytools", "Rcpp", "rgl", "RLumShiny", "scatterD3", "shiny", "shinyBS"] + "depends": ["MASS", "RLumShiny", "Rcpp", "ade4", "adegenet", "adegraphics", "ape", "combinat", "distory", "fields", "htmlwidgets", "phangorn", "phytools", "rgl", "scatterD3", "shiny", "shinyBS"] }, "treestartr": { "name": "treestartr", @@ -119901,15 +121137,15 @@ }, "treestats": { "name": "treestats", - "version": "1.0.5", - "sha256": "0j4bsag1fha3rnysidhd937vpxzvmq3vm1q4brqjpl08pniy9f9f", - "depends": ["ape", "Matrix", "nloptr", "Rcpp", "RSpectra"] + "version": "1.70.4", + "sha256": "0nfs4432q8nirhspdqnkp02a50c0rcphf1anx5qgqdal2njmk146", + "depends": ["Rcpp", "ape", "nloptr"] }, "treestructure": { "name": "treestructure", "version": "0.1.0", "sha256": "0514q53bdwv9fwd58srhr6lzw1j56fcd64hml8w4rv4wzcd6c01m", - "depends": ["ape", "Rcpp"] + "depends": ["Rcpp", "ape"] }, "trekcolors": { "name": "trekcolors", @@ -119927,7 +121163,7 @@ "name": "trelliscopejs", "version": "0.2.6", "sha256": "16i1km57yz8bl4ni919d3qmj8aj5l88l7byhd6ksh88ygpfl7wq8", - "depends": ["autocogs", "base64enc", "digest", "DistributionUtils", "dplyr", "ggplot2", "gtable", "htmltools", "htmlwidgets", "jsonlite", "knitr", "progress", "purrr", "rlang", "tidyr", "webshot"] + "depends": ["DistributionUtils", "autocogs", "base64enc", "digest", "dplyr", "ggplot2", "gtable", "htmltools", "htmlwidgets", "jsonlite", "knitr", "progress", "purrr", "rlang", "tidyr", "webshot"] }, "trelloR": { "name": "trelloR", @@ -119963,7 +121199,7 @@ "name": "trending", "version": "0.1.0", "sha256": "15nx0s5q2nk2z9lvpkpjzpg6qz0j182zzrl9v7wp70lfbpaahh24", - "depends": ["ciTools", "MASS", "pillar", "tibble", "vctrs"] + "depends": ["MASS", "ciTools", "pillar", "tibble", "vctrs"] }, "trendsegmentR": { "name": "trendsegmentR", @@ -119981,13 +121217,13 @@ "name": "triact", "version": "0.3.0", "sha256": "1ndxqrs1mg6ch99cksd7gnrjvhsklwfrjwrdxns099a3n16m3r0h", - "depends": ["checkmate", "data_table", "lubridate", "R6"] + "depends": ["R6", "checkmate", "data_table", "lubridate"] }, "trialr": { "name": "trialr", "version": "0.1.6", "sha256": "1a93pncc0w84z8d2xlgia9jvxad63r3ifxjd4nc284s760i9k2v7", - "depends": ["BH", "binom", "coda", "dplyr", "ggplot2", "gtools", "magrittr", "MASS", "purrr", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "stringr", "tibble", "tidybayes"] + "depends": ["BH", "MASS", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "binom", "coda", "dplyr", "ggplot2", "gtools", "magrittr", "purrr", "rlang", "rstan", "rstantools", "stringr", "tibble", "tidybayes"] }, "triangle": { "name": "triangle", @@ -120065,7 +121301,7 @@ "name": "trip", "version": "1.10.0", "sha256": "0jbzwrckazs5zib5lnhlqdc3b825fnk8pzmwixpgq8k7s2m9px0l", - "depends": ["crsmeta", "dplyr", "geodist", "glue", "MASS", "raster", "reproj", "rlang", "sp", "spatstat_explore", "spatstat_geom", "traipse", "viridis"] + "depends": ["MASS", "crsmeta", "dplyr", "geodist", "glue", "raster", "reproj", "rlang", "sp", "spatstat_explore", "spatstat_geom", "traipse", "viridis"] }, "tripEstimation": { "name": "tripEstimation", @@ -120081,8 +121317,8 @@ }, "triplesmatch": { "name": "triplesmatch", - "version": "1.0.0", - "sha256": "1qjwnyijk3yf9dl18baww806xz2w1jhxcnaw3nlb27g24m28j2dq", + "version": "1.1.0", + "sha256": "0k1kwv6yk5gwwqvn7wwhg02ny8avd70mqs91b4hm5bi6857wfg0h", "depends": ["MASS", "optmatch", "rcbalance", "rlang", "rlemon"] }, "triplot": { @@ -120101,13 +121337,13 @@ "name": "triptych", "version": "0.1.3", "sha256": "1ggifvzqa5ifa66mhg0bsv47g54nbih9zg4sbm6m9483wvnsxhhs", - "depends": ["class", "cpp11", "dplyr", "geomtextpath", "ggplot2", "ggrepel", "monotone", "patchwork", "pROC", "purrr", "rlang", "scales", "tibble", "tidyr", "tidyselect", "vctrs"] + "depends": ["class", "cpp11", "dplyr", "geomtextpath", "ggplot2", "ggrepel", "monotone", "pROC", "patchwork", "purrr", "rlang", "scales", "tibble", "tidyr", "tidyselect", "vctrs"] }, "triversity": { "name": "triversity", "version": "1.0", "sha256": "1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r", - "depends": ["data_tree", "Matrix"] + "depends": ["Matrix", "data_tree"] }, "troopdata": { "name": "troopdata", @@ -120139,6 +121375,12 @@ "sha256": "15aalp82igw23rlk36dqqkcnmcy8q869wjbr7ak19gygy8p525wn", "depends": ["Formula", "libcoin", "mlt", "partykit", "sandwich", "tram", "variables"] }, + "trud": { + "name": "trud", + "version": "0.1.0", + "sha256": "1mknagpm7m6m48hbzwc9r6sx657h792wmv6qpwb0x88rgla3wrn9", + "depends": ["cli", "dplyr", "httr2", "magrittr", "purrr", "rlang", "rvest", "stringr", "tibble", "tidyselect"] + }, "truelies": { "name": "truelies", "version": "0.2.0", @@ -120149,13 +121391,13 @@ "name": "truh", "version": "1.0.0", "sha256": "0acsyzm6rpmzyq8pg33c631hi4xir49gqxbpshcrr6i2v3q6k14j", - "depends": ["cluster", "doParallel", "foreach", "fpc", "iterators", "Rfast"] + "depends": ["Rfast", "cluster", "doParallel", "foreach", "fpc", "iterators"] }, "truncAIPW": { "name": "truncAIPW", "version": "1.0.1", "sha256": "01863yys0ih0piriksspylpsrfv7q4mkrsqhh1mgrkfyw1d11czn", - "depends": ["survival", "survPen"] + "depends": ["survPen", "survival"] }, "truncSP": { "name": "truncSP", @@ -120179,7 +121421,7 @@ "name": "truncnormbayes", "version": "0.0.3", "sha256": "06qz9xvqi59afjdq2djjvg455wx892w8p8wy2fb9wc4fnj0xbnrj", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "Rdpack", "StanHeaders", "rstan", "rstantools"] }, "truncreg": { "name": "truncreg", @@ -120221,13 +121463,13 @@ "name": "tsBSS", "version": "1.0.0", "sha256": "04nsbifc6zkilqifj6iwc0vf2z84y8wcbf8pndgkzi039kk6c385", - "depends": ["boot", "BSSprep", "forecast", "ICtest", "JADE", "Rcpp", "RcppArmadillo", "xts", "zoo"] + "depends": ["BSSprep", "ICtest", "JADE", "Rcpp", "RcppArmadillo", "boot", "forecast", "xts", "zoo"] }, "tsDyn": { "name": "tsDyn", "version": "11.0.4.1", "sha256": "04w7kf66q9bspyh62g8r9xzcb6mj6nd11za63b0h5jyj6rv6kbrq", - "depends": ["foreach", "forecast", "MASS", "Matrix", "mgcv", "mnormt", "nnet", "tseries", "tseriesChaos", "urca", "vars"] + "depends": ["MASS", "Matrix", "foreach", "forecast", "mgcv", "mnormt", "nnet", "tseries", "tseriesChaos", "urca", "vars"] }, "tsLSTMx": { "name": "tsLSTMx", @@ -120237,8 +121479,8 @@ }, "tsModel": { "name": "tsModel", - "version": "0.6-1", - "sha256": "16cyq4xisrp4i8bd8wayzzk08ws0rfq9zrafphb9cssx50gbqb8q", + "version": "0.6-2", + "sha256": "1v9dbznngs1ws5339f7583hjgbj4i8zv9skkg3c09wpw2r9ggfzq", "depends": [] }, "tsPI": { @@ -120263,7 +121505,7 @@ "name": "tsapp", "version": "1.0.4", "sha256": "1x3f10rdg3ihq5cx6w1zyz3irv1wsgx6admz5qv3zwwlk0z6cwpx", - "depends": ["fftwtools", "hdm", "Matrix", "vars"] + "depends": ["Matrix", "fftwtools", "hdm", "vars"] }, "tsbox": { "name": "tsbox", @@ -120275,7 +121517,7 @@ "name": "tscopula", "version": "0.3.9", "sha256": "1cx761pigb3dakyz8587giq22vxzz2nr25x1ivdpdyshsaqj5sxq", - "depends": ["arfima", "FKF", "kdensity", "ltsa", "Matrix", "polynom", "rvinecopulib", "xts", "zoo"] + "depends": ["FKF", "Matrix", "arfima", "kdensity", "ltsa", "polynom", "rvinecopulib", "xts", "zoo"] }, "tscount": { "name": "tscount", @@ -120317,13 +121559,13 @@ "name": "tsdistributions", "version": "1.0.1", "sha256": "0xhia2w6s0b2zfva2pj58n8vj666ffmmgcbdid9lbgcsy09fsf01", - "depends": ["data_table", "future", "future_apply", "GeneralizedHyperbolic", "KernSmooth", "mev", "progressr", "RcppEigen", "Rdpack", "Rsolnp", "sandwich", "SkewHyperbolic", "TMB", "tsmethods", "zoo"] + "depends": ["GeneralizedHyperbolic", "KernSmooth", "RcppEigen", "Rdpack", "Rsolnp", "SkewHyperbolic", "TMB", "data_table", "future", "future_apply", "mev", "progressr", "sandwich", "tsmethods", "zoo"] }, "tsensembler": { "name": "tsensembler", "version": "0.1.0", "sha256": "0amb3dn96hdgy5a0j6s43mf82cdjwbz8dhz3yrjlr07nknxzirzi", - "depends": ["Cubist", "doParallel", "earth", "foreach", "gbm", "glmnet", "kernlab", "monmlp", "pls", "ranger", "RcppRoll", "softImpute", "xgboost", "xts", "zoo"] + "depends": ["Cubist", "RcppRoll", "doParallel", "earth", "foreach", "gbm", "glmnet", "kernlab", "monmlp", "pls", "ranger", "softImpute", "xgboost", "xts", "zoo"] }, "tsentiment": { "name": "tsentiment", @@ -120333,8 +121575,8 @@ }, "tseries": { "name": "tseries", - "version": "0.10-56", - "sha256": "1s7sz95j6mm4708s3hffrnfkmdjgj43gba07wr6v24fg9xygq7m8", + "version": "0.10-57", + "sha256": "1vlvz009y683k3xz2bhzkfdnk5m2c9abfz7661p92a17cjvlnx8q", "depends": ["jsonlite", "quadprog", "quantmod", "zoo"] }, "tseriesChaos": { @@ -120353,25 +121595,25 @@ "name": "tseriesTARMA", "version": "0.3-4", "sha256": "00ch7dg9fia7yh9q502wndi72nhz5ywqhhla9qgpgg08sfj2414f", - "depends": ["lbfgsb3c", "mathjaxr", "Matrix", "Rdpack", "Rsolnp", "rugarch", "zoo"] + "depends": ["Matrix", "Rdpack", "Rsolnp", "lbfgsb3c", "mathjaxr", "rugarch", "zoo"] }, "tsfeatures": { "name": "tsfeatures", "version": "1.1.1", "sha256": "1z0c1pc2hsw76qwy6nibp1dnmk5vq495g2b81j844ajma6gj7ssy", - "depends": ["forecast", "fracdiff", "furrr", "future", "purrr", "RcppRoll", "tibble", "tseries", "urca"] + "depends": ["RcppRoll", "forecast", "fracdiff", "furrr", "future", "purrr", "tibble", "tseries", "urca"] }, "tsfgrnn": { "name": "tsfgrnn", "version": "1.0.5", "sha256": "0pbscnz2mr7nnxvgcs7sw3awq78p5r4h0nwwycn6fi7wq7ngpd92", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "tsfknn": { "name": "tsfknn", "version": "0.6.0", "sha256": "1yw0k2ivx31b4170wf93vvha4jpkapg4sg5j59igiayf750x1j6h", - "depends": ["ggplot2", "Rcpp"] + "depends": ["Rcpp", "ggplot2"] }, "tsfngm": { "name": "tsfngm", @@ -120383,7 +121625,7 @@ "name": "tsgarch", "version": "1.0.2", "sha256": "1hlbz6iycq9fvmcrdf238a48dl9hdpdrvxa5vfz1j28061r3sp8f", - "depends": ["data_table", "flextable", "future", "future_apply", "lubridate", "nloptr", "numDeriv", "progressr", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "sandwich", "TMB", "tsdistributions", "tsmethods", "xts", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "TMB", "data_table", "flextable", "future", "future_apply", "lubridate", "nloptr", "numDeriv", "progressr", "sandwich", "tsdistributions", "tsmethods", "xts", "zoo"] }, "tsiR": { "name": "tsiR", @@ -120393,8 +121635,8 @@ }, "tsibble": { "name": "tsibble", - "version": "1.1.4", - "sha256": "17zdlrp9rfh61q23k21yqzs6q7c0g5r93cxxqa3ig5ibmvhsfsrl", + "version": "1.1.5", + "sha256": "1ay4i9lc380y2h21l64sabv9lfz0dhzvldnhb6nakm0l176q6cg6", "depends": ["anytime", "dplyr", "ellipsis", "generics", "lifecycle", "lubridate", "rlang", "tibble", "tidyselect", "vctrs"] }, "tsibbledata": { @@ -120407,7 +121649,7 @@ "name": "tsibbletalk", "version": "0.1.0", "sha256": "14j1gpimvlz9cgxgl1n68ngkqx4w2ai92782ifrpvc57lqy9cs7v", - "depends": ["crosstalk", "dendextend", "dplyr", "glue", "lubridate", "plotly", "R6", "rlang", "shiny", "tsibble", "vctrs"] + "depends": ["R6", "crosstalk", "dendextend", "dplyr", "glue", "lubridate", "plotly", "rlang", "shiny", "tsibble", "vctrs"] }, "tsintermittent": { "name": "tsintermittent", @@ -120425,7 +121667,7 @@ "name": "tsmp", "version": "0.4.15", "sha256": "129vzazhcxynmi8nki0amm5xf57ji0fik0j6aj7r9izh4wq6lysn", - "depends": ["audio", "checkmate", "doSNOW", "foreach", "magrittr", "progress", "Rcpp", "RcppParallel", "RJSONIO"] + "depends": ["RJSONIO", "Rcpp", "RcppParallel", "audio", "checkmate", "doSNOW", "foreach", "magrittr", "progress"] }, "tsna": { "name": "tsna", @@ -120443,7 +121685,7 @@ "name": "tsnet", "version": "0.1.0", "sha256": "14wy4mfzxkigdm3abfybijqicfqxl0gfbf72asadwipaqyw91nf6", - "depends": ["BH", "cowplot", "dplyr", "ggdist", "ggokabeito", "ggplot2", "posterior", "Rcpp", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders", "tidyr"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "cowplot", "dplyr", "ggdist", "ggokabeito", "ggplot2", "posterior", "rlang", "rstan", "rstantools", "tidyr"] }, "tsoutliers": { "name": "tsoutliers", @@ -120455,19 +121697,19 @@ "name": "tspmeta", "version": "1.2", "sha256": "028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd", - "depends": ["BBmisc", "checkmate", "fpc", "ggplot2", "MASS", "splancs", "stringr", "TSP", "vegan"] + "depends": ["BBmisc", "MASS", "TSP", "checkmate", "fpc", "ggplot2", "splancs", "stringr", "vegan"] }, "tspredit": { "name": "tspredit", - "version": "1.0.767", - "sha256": "0gxsbhigq0qxiw6kx4p7wgqjx7c09qj03w7j6600p2jzaqz959zj", - "depends": ["daltoolbox", "DescTools", "dplyr", "forecast", "KFAS", "mFilter"] + "version": "1.0.777", + "sha256": "0yqgd9rlqldplcsq8hk1wkgjq0931sbqdxd31ynylkpiy4d0psca", + "depends": ["DescTools", "KFAS", "daltoolbox", "dplyr", "forecast", "hht", "mFilter", "wavelets"] }, "tsqn": { "name": "tsqn", "version": "1.0.0", "sha256": "1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9", - "depends": ["fracdiff", "MASS", "robustbase"] + "depends": ["MASS", "fracdiff", "robustbase"] }, "tsriadditive": { "name": "tsriadditive", @@ -120479,7 +121721,7 @@ "name": "tsrobprep", "version": "0.3.2", "sha256": "0y7h8kh721r859b7y5vxh4q7dmjlx50qcc6pib204x3hhzv1yyrc", - "depends": ["glmnet", "MASS", "Matrix", "mclust", "quantreg", "Rdpack", "textTinyR", "zoo"] + "depends": ["MASS", "Matrix", "Rdpack", "glmnet", "mclust", "quantreg", "textTinyR", "zoo"] }, "tssim": { "name": "tssim", @@ -120491,7 +121733,7 @@ "name": "tstests", "version": "1.0.0", "sha256": "00gjmvg1b7v2cdrv95l9ic9j50wch8y23qxkiqmrp1nznjjicpsy", - "depends": ["car", "data_table", "flextable", "ks", "Rdpack", "tsmethods", "xts"] + "depends": ["Rdpack", "car", "data_table", "flextable", "ks", "tsmethods", "xts"] }, "tstools": { "name": "tstools", @@ -120503,7 +121745,7 @@ "name": "tsutils", "version": "0.9.4", "sha256": "1jf37asxg4nfm1jhf6q6fjs8dljlqs1r57kr4q38dnz11hz1jsm4", - "depends": ["forecast", "MAPA", "plotrix", "RColorBrewer"] + "depends": ["MAPA", "RColorBrewer", "forecast", "plotrix"] }, "tsvio": { "name": "tsvio", @@ -120527,19 +121769,19 @@ "name": "tswge", "version": "2.1.0", "sha256": "1pl10n20w2vz95q28zjiafcjmjij586h33s5b0nqvxfwlask6xbw", - "depends": ["astsa", "dplyr", "forecast", "ggplot2", "magrittr", "MASS", "nnfor", "plotrix", "PolynomF", "signal", "tidyverse", "waveslim", "zoo"] + "depends": ["MASS", "PolynomF", "astsa", "dplyr", "forecast", "ggplot2", "magrittr", "nnfor", "plotrix", "signal", "tidyverse", "waveslim", "zoo"] }, "tsxtreme": { "name": "tsxtreme", "version": "0.3.3", "sha256": "1725rkdq377z3c06hc2g9l0dwgfy5gz3pgygpz1pyy83s5c7j869", - "depends": ["evd", "MASS", "mvtnorm", "tictoc"] + "depends": ["MASS", "evd", "mvtnorm", "tictoc"] }, "ttScreening": { "name": "ttScreening", "version": "1.6", "sha256": "1i8c9l3sdkzl99zxxyfqm84vkh6wjdh3a32l5q8ikf74g9dhxkf4", - "depends": ["corpcor", "limma", "MASS", "matrixStats", "simsalapar", "sva"] + "depends": ["MASS", "corpcor", "limma", "matrixStats", "simsalapar", "sva"] }, "ttbary": { "name": "ttbary", @@ -120575,7 +121817,7 @@ "name": "ttservice", "version": "0.4.1", "sha256": "1r0prv3p3xlcfn16bxjyvkr255rsaf5m26c394qxc78y6qf6wrbd", - "depends": ["dplyr", "Matrix", "plotly"] + "depends": ["Matrix", "dplyr", "plotly"] }, "ttt": { "name": "ttt", @@ -120629,7 +121871,7 @@ "name": "tukeytrend", "version": "0.7", "sha256": "15j7g0drb92rpxq7d0jl9h0hxpi9pbgpvfcxaicrcgypxap3721q", - "depends": ["lme4", "Matrix", "mgcv", "multcomp", "nlme", "pbkrtest"] + "depends": ["Matrix", "lme4", "mgcv", "multcomp", "nlme", "pbkrtest"] }, "tumgr": { "name": "tumgr", @@ -120641,7 +121883,7 @@ "name": "tune", "version": "1.2.1", "sha256": "1qb4ncadq10pzy8xhkpgg06raahbv6n8002wdjdh4jlv73hsk6ki", - "depends": ["cli", "dials", "doFuture", "dplyr", "foreach", "future", "generics", "ggplot2", "glue", "GPfit", "hardhat", "lifecycle", "parsnip", "purrr", "recipes", "rlang", "rsample", "tibble", "tidyr", "tidyselect", "vctrs", "withr", "workflows", "yardstick"] + "depends": ["GPfit", "cli", "dials", "doFuture", "dplyr", "foreach", "future", "generics", "ggplot2", "glue", "hardhat", "lifecycle", "parsnip", "purrr", "recipes", "rlang", "rsample", "tibble", "tidyr", "tidyselect", "vctrs", "withr", "workflows", "yardstick"] }, "tuneR": { "name": "tuneR", @@ -120653,7 +121895,7 @@ "name": "tuneRanger", "version": "0.7", "sha256": "17hsqwg4h2pjns4bx3yjrkml8yn1vdxarf8lc4g9d4z01k4m7jk8", - "depends": ["BBmisc", "DiceKriging", "lhs", "mlr", "mlrMBO", "ParamHelpers", "ranger", "smoof"] + "depends": ["BBmisc", "DiceKriging", "ParamHelpers", "lhs", "mlr", "mlrMBO", "ranger", "smoof"] }, "tuple": { "name": "tuple", @@ -120681,9 +121923,9 @@ }, "tutorial_helpers": { "name": "tutorial.helpers", - "version": "0.2.7", - "sha256": "0r8dadwd6gcvbcyy7kj0l0n8rmbmjfjg3d31pjlfmmgbv0ax21hc", - "depends": ["dplyr", "gridExtra", "learnr", "parsermd", "purrr", "readr", "rmarkdown", "rstudioapi", "shiny", "stringr", "tibble"] + "version": "0.3.0", + "sha256": "0q8rwa2x7ail9rswlldbi8i7dly0yafc4ch4pbz7widgxv1wwc7l", + "depends": ["dplyr", "learnr", "mime", "parsermd", "purrr", "readr", "rmarkdown", "rstudioapi", "rvest", "shiny", "stringr", "tibble"] }, "tv": { "name": "tv", @@ -120701,7 +121943,7 @@ "name": "tvReg", "version": "0.5.9", "sha256": "0viv485l2b93j72274h9m3dkrm2ah0kn37pgbxby3ajg2gi86bh9", - "depends": ["bvarsv", "MASS", "Matrix", "plm", "systemfit", "vars"] + "depends": ["MASS", "Matrix", "bvarsv", "plm", "systemfit", "vars"] }, "tvem": { "name": "tvem", @@ -120747,15 +121989,15 @@ }, "twang": { "name": "twang", - "version": "2.6", - "sha256": "1nvzcrgaspl987ny49rxf3lm3mqiw286kipzrmszdsqwy4m3ha0b", - "depends": ["data_table", "gbm", "ggplot2", "lattice", "latticeExtra", "MatrixModels", "survey", "xgboost", "xtable"] + "version": "2.6.1", + "sha256": "0yci9qp9pvp4a8py2rb18kmxy8k2mblnbdahdkcjh1lviz6pvf0b", + "depends": ["MatrixModels", "data_table", "gbm", "ggplot2", "lattice", "latticeExtra", "survey", "xgboost", "xtable"] }, "twangContinuous": { "name": "twangContinuous", "version": "1.0.0", "sha256": "0bn1i9nid97irn820591ml3556bbmg6pw2qhm9k9vqgnqmnhcfnq", - "depends": ["gbm", "lattice", "Rcpp", "survey", "xtable"] + "depends": ["Rcpp", "gbm", "lattice", "survey", "xtable"] }, "twangMediation": { "name": "twangMediation", @@ -120767,13 +122009,13 @@ "name": "twangRDC", "version": "1.0", "sha256": "03z2c18nq6iwwb3si7wjc56npdyray3xsy6k6ifvbalib2ibv2f1", - "depends": ["data_table", "ggplot2", "MatrixModels", "xgboost"] + "depends": ["MatrixModels", "data_table", "ggplot2", "xgboost"] }, "twdtw": { "name": "twdtw", "version": "1.0-1", "sha256": "1w90942yf5xy1h0pf8x9zmq9wvm3n30flvi88bi0inv63ld17lyf", - "depends": ["proxy", "Rcpp"] + "depends": ["Rcpp", "proxy"] }, "tweedie": { "name": "tweedie", @@ -120791,13 +122033,13 @@ "name": "tweetcheck", "version": "0.1.0", "sha256": "025qshp3q7h54mwxx6707x24dciisf7rh6z7sbzchikrk1gh5wij", - "depends": ["tibble", "V8"] + "depends": ["V8", "tibble"] }, "twenty48": { "name": "twenty48", "version": "0.2.1", "sha256": "1aii4yd10k0jxd6ghdgm5d0pbr9d4m0lg6kaqig58d3s1klw5izd", - "depends": ["crayon", "R6", "rstudioapi"] + "depends": ["R6", "crayon", "rstudioapi"] }, "twfy": { "name": "twfy", @@ -120821,7 +122063,7 @@ "name": "twitteR", "version": "1.1.9", "sha256": "1hh055aqb8iddk9bdqw82r3df9rwjqsg5a0d2i0rs1bry8z4kzbr", - "depends": ["bit64", "DBI", "httr", "rjson"] + "depends": ["DBI", "bit64", "httr", "rjson"] }, "twitteradsR": { "name": "twitteradsR", @@ -120839,7 +122081,7 @@ "name": "twl", "version": "1.0", "sha256": "0n2r40ddsr5zpzi92k7f0lvq78k5cmfbqzjxvr78hwq6j13dhar3", - "depends": ["corrplot", "data_table", "MCMCpack", "Rfast"] + "depends": ["MCMCpack", "Rfast", "corrplot", "data_table"] }, "twn": { "name": "twn", @@ -120851,7 +122093,7 @@ "name": "twopartm", "version": "0.1.0", "sha256": "0hncdfc9l1m31158kk5jdciqasv8nqr2q7cam38wi2wclqpk5r5v", - "depends": ["data_table", "MASS"] + "depends": ["MASS", "data_table"] }, "twopexp": { "name": "twopexp", @@ -120879,9 +122121,9 @@ }, "twowaytests": { "name": "twowaytests", - "version": "1.3", - "sha256": "0z04iizdqas9lhmw8i4k5i575j38b9xd4qkk5mrsnk8jm40fljcc", - "depends": ["car", "ggplot2", "nortest", "onewaytests", "wesanderson"] + "version": "1.4", + "sha256": "1blzifflmkcvjysw4bbn81fgydczg9rkcqchw832d322dymh2hzn", + "depends": ["MASS", "car", "ggplot2", "nortest", "onewaytests", "wesanderson"] }, "twoxtwo": { "name": "twoxtwo", @@ -120893,7 +122135,7 @@ "name": "txshift", "version": "0.3.8", "sha256": "0lniwb7lijcasqmhs1zryb9wqf5xka13q4yb9m2j8dblb51y3i79", - "depends": ["assertthat", "data_table", "ggplot2", "hal9001", "haldensify", "latex2exp", "lspline", "mvtnorm", "Rdpack", "scales", "stringr"] + "depends": ["Rdpack", "assertthat", "data_table", "ggplot2", "hal9001", "haldensify", "latex2exp", "lspline", "mvtnorm", "scales", "stringr"] }, "txtplot": { "name": "txtplot", @@ -120905,7 +122147,7 @@ "name": "txtq", "version": "0.2.4", "sha256": "1fvjprcwfqbw9c4sqcxv8r0jgvqmkip6d86r3cgrhwyic1ndk1l5", - "depends": ["base64url", "filelock", "R6"] + "depends": ["R6", "base64url", "filelock"] }, "typed": { "name": "typed", @@ -120951,21 +122193,21 @@ }, "uGMAR": { "name": "uGMAR", - "version": "3.4.5", - "sha256": "01zs919b24qb102qf9m19x0zzyg7yx8v8w674awzfk4lvm27d2aq", + "version": "3.5.0", + "sha256": "0bd5qj3sqb5swirjpind4rap3yssldjv2zd874p52z88rnf3qhys", "depends": ["Brobdingnag", "gsl", "pbapply"] }, "uHMM": { "name": "uHMM", "version": "1.0", "sha256": "1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl", - "depends": ["chron", "class", "cluster", "clValid", "corrplot", "FactoMineR", "HMM", "tcltk2", "tkrplot"] + "depends": ["FactoMineR", "HMM", "chron", "clValid", "class", "cluster", "corrplot", "tcltk2", "tkrplot"] }, "uaparserjs": { "name": "uaparserjs", "version": "0.3.5", "sha256": "0v24smgsz1p2wa23mc2llx7dycwmgf7zyxdhwxgwplabpmy3xzhl", - "depends": ["progress", "V8"] + "depends": ["V8", "progress"] }, "uavRmp": { "name": "uavRmp", @@ -120977,13 +122219,13 @@ "name": "ubiquity", "version": "2.0.3", "sha256": "1w1agdarsh45zf66cbczvippzk3f0ns5dajfbr1181j274f39rnh", - "depends": ["cli", "deSolve", "digest", "doParallel", "dplyr", "flextable", "foreach", "ggplot2", "knitr", "magrittr", "MASS", "onbrand", "optimx", "PKNCA", "pso", "readxl", "rhandsontable", "rmarkdown", "scales", "shiny", "stringr"] + "depends": ["MASS", "PKNCA", "cli", "deSolve", "digest", "doParallel", "dplyr", "flextable", "foreach", "ggplot2", "knitr", "magrittr", "onbrand", "optimx", "pso", "readxl", "rhandsontable", "rmarkdown", "scales", "shiny", "stringr"] }, "ubms": { "name": "ubms", "version": "1.2.6", "sha256": "10jr2nb8pq0rxx1h0zci4zybbj108maa5kdzgf9bj87pzsrxhda7", - "depends": ["BH", "ggplot2", "gridExtra", "lme4", "loo", "Matrix", "pbapply", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "rlang", "RSpectra", "rstan", "rstantools", "StanHeaders", "unmarked"] + "depends": ["BH", "Matrix", "RSpectra", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "StanHeaders", "ggplot2", "gridExtra", "lme4", "loo", "pbapply", "rlang", "rstan", "rstantools", "unmarked"] }, "uci": { "name": "uci", @@ -120997,6 +122239,12 @@ "sha256": "032anlli29a0iwzmn35afrcs4if5kipplpn8n4qpy1g14hc5zgvd", "depends": ["colorspace", "dplyr", "geometry", "pracma", "ptinpoly", "remotes", "rgl"] }, + "ucimlrepo": { + "name": "ucimlrepo", + "version": "0.0.1", + "sha256": "0v0qprchgi8553hf4aqwd4gn06spbr0yzym8c5z1c3dqy9vp8bax", + "depends": ["httr2"] + }, "uclust": { "name": "uclust", "version": "1.0.0", @@ -121005,15 +122253,15 @@ }, "ucminf": { "name": "ucminf", - "version": "1.2.1", - "sha256": "10ycpzxx73div9vpzmkhy524yd47kzmpl7ajpm248clsv6ivngpd", + "version": "1.2.2", + "sha256": "0adxynpi6mn5n37i1260yr6z7dm39dadr4nwrxks2jgsd7knmnsb", "depends": [] }, "udpipe": { "name": "udpipe", "version": "0.8.11", "sha256": "0crjcfrpb0m7f58w7ksz7kvglvmc45axy9kbbvqz9w6i4kg00aaj", - "depends": ["data_table", "Matrix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "data_table"] }, "udunits2": { "name": "udunits2", @@ -121031,19 +122279,19 @@ "name": "ufs", "version": "0.5.12", "sha256": "002xvhn1mcgfjzaslarra0bv33plyz1a4akjxxbmh4q4v6abxk88", - "depends": ["digest", "diptest", "dplyr", "ggplot2", "ggrepel", "ggridges", "GPArotation", "gridExtra", "gtable", "htmltools", "kableExtra", "knitr", "pander", "plyr", "pwr", "rmdpartials", "scales", "SuppDists"] + "depends": ["GPArotation", "SuppDists", "digest", "diptest", "dplyr", "ggplot2", "ggrepel", "ggridges", "gridExtra", "gtable", "htmltools", "kableExtra", "knitr", "pander", "plyr", "pwr", "rmdpartials", "scales"] }, "ugatsdb": { "name": "ugatsdb", "version": "0.2.3", "sha256": "098dzh6slaxj22730nm9g6b5653600ms2ahxr87iblh5xq0dcidl", - "depends": ["collapse", "data_table", "DBI", "RMySQL", "writexl"] + "depends": ["DBI", "RMySQL", "collapse", "data_table", "writexl"] }, "ugomquantreg": { "name": "ugomquantreg", "version": "1.0.0", "sha256": "1a5vc1qgy3kp1by5bp296w980lkxcghzzxibhap2jg06jnzjfcq8", - "depends": ["gamlss", "gamlss_dist", "pracma", "Rcpp"] + "depends": ["Rcpp", "gamlss", "gamlss_dist", "pracma"] }, "ui": { "name": "ui", @@ -121073,19 +122321,19 @@ "name": "ukbnmr", "version": "2.2", "sha256": "05bcsz74aayi5rk9nv7izj4xz9mmf1yw933syvvp2g0ly6z8l66w", - "depends": ["bit64", "data_table", "MASS"] + "depends": ["MASS", "bit64", "data_table"] }, "ukbtools": { "name": "ukbtools", "version": "0.11.3", "sha256": "1j5p9ypn3s781582all64kvywih1ry0lqsh1zirr35g7r46fy783", - "depends": ["data_table", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "purrr", "readr", "scales", "stringr", "tibble", "tidyr", "XML"] + "depends": ["XML", "data_table", "doParallel", "dplyr", "foreach", "ggplot2", "magrittr", "purrr", "readr", "scales", "stringr", "tibble", "tidyr"] }, "ukgasapi": { "name": "ukgasapi", "version": "0.21", "sha256": "1acl04bm8f2hgi26mpmzcwp44yv9zxarzw4r4k20b367k8g9rh8a", - "depends": ["httr", "XML"] + "depends": ["XML", "httr"] }, "uklr": { "name": "uklr", @@ -121099,6 +122347,12 @@ "sha256": "1dwwixhiarlpdss7rhiamzcsl1k2yphgmjzh7wn2my4vxj06817l", "depends": ["httr", "jsonlite", "purrr", "snakecase", "tibble"] }, + "ulex": { + "name": "ulex", + "version": "0.1.0", + "sha256": "1h379kqnnp1vvgx35q67h47fd8q9g81m234xsx5vshm3jvqakhn0", + "depends": ["dplyr", "geodist", "hunspell", "ngram", "purrr", "quanteda", "raster", "readr", "sf", "spacyr", "stringdist", "stringi", "stringr", "tidyr", "tidytext", "tm"] + }, "ulid": { "name": "ulid", "version": "0.4.0", @@ -121107,15 +122361,21 @@ }, "ulrb": { "name": "ulrb", - "version": "0.1.3", - "sha256": "0xwlj8cc7y4p51r0p46bz1ac7klrl2b9h7cr704d0cpvcwy11y7f", + "version": "0.1.5", + "sha256": "044gais5550wbr4gbfskm861hanwxmqyv53ghyhdr5868kqx127m", "depends": ["cluster", "clusterSim", "dplyr", "ggplot2", "gridExtra", "purrr", "rlang", "tidyr"] }, + "ultrapolaRplot": { + "name": "ultrapolaRplot", + "version": "0.1.1", + "sha256": "0a1dyz59ian3l1d4qjj8zqnmaiix33nwlsg42m2rq87p3zhh3h6z", + "depends": ["Cairo", "RColorBrewer", "ggplot2", "plyr", "purrr", "readr", "rjson", "stringr", "tibble"] + }, "umap": { "name": "umap", "version": "0.2.10.0", "sha256": "1abfddi0rq75b7nlx6550fx9nrqa62vb92xyp05ris25jf98ciwd", - "depends": ["Matrix", "openssl", "Rcpp", "reticulate", "RSpectra"] + "depends": ["Matrix", "RSpectra", "Rcpp", "openssl", "reticulate"] }, "umbridge": { "name": "umbridge", @@ -121127,7 +122387,7 @@ "name": "umiAnalyzer", "version": "1.0.0", "sha256": "147x48mr9mj0njwbz39876795rninvk89zm9immkppdm4s5g1ghf", - "depends": ["BiocManager", "dplyr", "DT", "forcats", "ggplot2", "gridExtra", "magrittr", "pheatmap", "plotly", "readr", "Rsamtools", "scales", "shiny", "shinydashboard", "shinyFiles", "shinyWidgets", "stringr", "tibble", "tidyr", "viridis"] + "depends": ["BiocManager", "DT", "Rsamtools", "dplyr", "forcats", "ggplot2", "gridExtra", "magrittr", "pheatmap", "plotly", "readr", "scales", "shiny", "shinyFiles", "shinyWidgets", "shinydashboard", "stringr", "tibble", "tidyr", "viridis"] }, "ump": { "name": "ump", @@ -121139,7 +122399,7 @@ "name": "umx", "version": "4.20.0", "sha256": "1b0xkwy9b8sq686smjjl08wmvijnkvm0rh3gy31lamcbw7k0b60w", - "depends": ["cowplot", "DiagrammeR", "foreign", "gert", "ggplot2", "hrbrthemes", "kableExtra", "knitr", "lavaan", "MASS", "Matrix", "MuMIn", "mvtnorm", "nlme", "OpenMx", "openxlsx", "paran", "polycor", "psych", "psychTools", "pwr", "R2HTML", "RCurl", "rmarkdown", "scales", "xtable"] + "depends": ["DiagrammeR", "MASS", "Matrix", "MuMIn", "OpenMx", "R2HTML", "RCurl", "cowplot", "foreign", "gert", "ggplot2", "hrbrthemes", "kableExtra", "knitr", "lavaan", "mvtnorm", "nlme", "openxlsx", "paran", "polycor", "psych", "psychTools", "pwr", "rmarkdown", "scales", "xtable"] }, "unbalhaar": { "name": "unbalhaar", @@ -121147,6 +122407,12 @@ "sha256": "0fgnvl9ammawgm5nf2icw64yzivqw7sl07dpvrsb5rypvrm8d040", "depends": [] }, + "uncertainUCDP": { + "name": "uncertainUCDP", + "version": "0.5.2", + "sha256": "0jrwwdnb7ss5w8ihlxvpjwi2c039kys9lmbdkxsdglkf2a0ck6hx", + "depends": ["dplyr", "mistr", "rlang", "tibble"] + }, "uncertainty": { "name": "uncertainty", "version": "0.2.0", @@ -121163,13 +122429,13 @@ "name": "uncorbets", "version": "0.1.2", "sha256": "1kp1rglxz4p38y399ym6q1p5i3xmb38px44bc4bba4r7x7b47n1x", - "depends": ["assertthat", "NlcOptim"] + "depends": ["NlcOptim", "assertthat"] }, "understandBPMN": { "name": "understandBPMN", "version": "1.1.1", "sha256": "04wnyxplrn5c6jb76dw25pawwcvvn5xq80lqn5imsf31nbwybpm5", - "depends": ["devtools", "dplyr", "purrr", "R_utils", "Rcpp", "tibble", "tidyr", "usethis", "XML"] + "depends": ["R_utils", "Rcpp", "XML", "devtools", "dplyr", "purrr", "tibble", "tidyr", "usethis"] }, "unglue": { "name": "unglue", @@ -121181,7 +122447,7 @@ "name": "ungroup", "version": "1.4.4", "sha256": "12dqhysz26l1jrnf4sz43hdpsxch8g1iah7cxsx7rcac42lhzwdk", - "depends": ["Matrix", "pbapply", "Rcpp", "RcppEigen", "Rdpack"] + "depends": ["Matrix", "Rcpp", "RcppEigen", "Rdpack", "pbapply"] }, "unhcrthemes": { "name": "unhcrthemes", @@ -121205,13 +122471,13 @@ "name": "uniReg", "version": "1.1", "sha256": "0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab", - "depends": ["DoseFinding", "MASS", "mvtnorm", "quadprog", "SEL"] + "depends": ["DoseFinding", "MASS", "SEL", "mvtnorm", "quadprog"] }, "uniah": { "name": "uniah", "version": "1.2", "sha256": "0hv7zgj55am1mlb8vl8k690z641lwsnsxdcvg7zzkhfpj58p7wai", - "depends": ["ahaz", "Iso", "survival"] + "depends": ["Iso", "ahaz", "survival"] }, "unicol": { "name": "unicol", @@ -121235,7 +122501,7 @@ "name": "unifir", "version": "0.2.4", "sha256": "02d9h1yalha7b7bdsjqpq1xa3gg0spfk42q2wxv1bjsizzbnbq2r", - "depends": ["glue", "proceduralnames", "R6"] + "depends": ["R6", "glue", "proceduralnames"] }, "uniformly": { "name": "uniformly", @@ -121271,7 +122537,7 @@ "name": "unisensR", "version": "0.3.3", "sha256": "1pqfb8i3rj64l9hh1bn9mm78wlfqphgrlp7zrydznqy88f4jwgvy", - "depends": ["hexView", "vroom", "XML"] + "depends": ["XML", "hexView", "vroom"] }, "uniset": { "name": "uniset", @@ -121295,7 +122561,7 @@ "name": "unitquantreg", "version": "0.0.6", "sha256": "087d4v5fpiznl37frjg6c01bfgvx3vx0yw8cnbm3wsdj9dak94ym", - "depends": ["Formula", "MASS", "numDeriv", "optimx", "quantreg", "Rcpp"] + "depends": ["Formula", "MASS", "Rcpp", "numDeriv", "optimx", "quantreg"] }, "units": { "name": "units", @@ -121305,8 +122571,8 @@ }, "unittest": { "name": "unittest", - "version": "1.6-1", - "sha256": "1y035zj23am2d6cmfz93nyflwwivfy5lq4m5d17yb6s1lir057pn", + "version": "1.7-0", + "sha256": "157py251fq3hkqv4782jaymahskahh10mcsva4nci681p2683wvb", "depends": [] }, "univOutl": { @@ -121349,7 +122615,7 @@ "name": "unmarked", "version": "1.4.1", "sha256": "1ishwzqkkvin7vralpxnb2fdc75gvsxz1l5b9902y4h0mm4749qw", - "depends": ["lattice", "lme4", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "TMB"] + "depends": ["MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppEigen", "TMB", "lattice", "lme4"] }, "unmconf": { "name": "unmconf", @@ -121385,13 +122651,13 @@ "name": "unstruwwel", "version": "0.2.0", "sha256": "1s8vfmh1lafb244r0bwp4m0r9x5la95lglxqvhb4sq9wmah04ka7", - "depends": ["assertthat", "dplyr", "lubridate", "magrittr", "purrr", "R6", "rlang", "stringr", "tibble", "tidyr"] + "depends": ["R6", "assertthat", "dplyr", "lubridate", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "unsystation": { "name": "unsystation", "version": "0.2.0", "sha256": "02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8", - "depends": ["doParallel", "foreach", "iterators", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "doParallel", "foreach", "iterators"] }, "untb": { "name": "untb", @@ -121433,7 +122699,7 @@ "name": "updog", "version": "2.1.5", "sha256": "118i7z797cc7hhsk0i4w7n0p7znw9szvn7mbymc7d9yqnck4x6d9", - "depends": ["assertthat", "doFuture", "doRNG", "foreach", "future", "ggplot2", "iterators", "Rcpp", "RcppArmadillo", "reshape2"] + "depends": ["Rcpp", "RcppArmadillo", "assertthat", "doFuture", "doRNG", "foreach", "future", "ggplot2", "iterators", "reshape2"] }, "upndown": { "name": "upndown", @@ -121463,12 +122729,12 @@ "name": "uptimeRobot", "version": "1.0.0", "sha256": "1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww", - "depends": ["plyr", "RCurl", "rjson"] + "depends": ["RCurl", "plyr", "rjson"] }, "ura": { "name": "ura", - "version": "1.0.0", - "sha256": "18gs49hcmii951f995ch1sbk69lpf458halff539l8birv26q70d", + "version": "1.0.1", + "sha256": "1ahj58yn7gn8lcj95xxzg39p7vznppslqj4vyq5x66c21vq7dmn4", "depends": ["dplyr", "irr", "magrittr", "rlang", "tibble", "tidyr"] }, "urbin": { @@ -121563,21 +122829,21 @@ }, "usedthese": { "name": "usedthese", - "version": "0.4.0", - "sha256": "0qzhydj0i6cg2w8qfgabx10vqfzkfhv7vq8qds6d624c3ayc653h", - "depends": ["conflicted", "dplyr", "highr", "kableExtra", "knitr", "purrr", "readr", "rlang", "stringr", "tibble", "tidyr", "tidyselect", "withr"] + "version": "0.5.0", + "sha256": "0ahcyvy2w87mx2qr7pl1fzihiqnsjqbbx1ba435b8ypyz7fzrpy6", + "depends": ["cli", "conflicted", "dplyr", "highr", "httr", "kableExtra", "knitr", "lifecycle", "purrr", "readr", "rlang", "rvest", "stringr", "tibble", "tidyr", "tidyselect", "withr"] }, "useful": { "name": "useful", "version": "1.2.6.1", "sha256": "1gb9hqvbm6pr56dfqlsgz26lan7xargfsm8jpdja18mpgli2gyvc", - "depends": ["assertthat", "dplyr", "ggplot2", "magrittr", "Matrix", "plyr", "purrr", "scales"] + "depends": ["Matrix", "assertthat", "dplyr", "ggplot2", "magrittr", "plyr", "purrr", "scales"] }, "usefun": { "name": "usefun", "version": "0.5.0", "sha256": "1gpyix8xpn4jmfjrycan6r1qvp7z7mhcngp02fcws6k2hvd7jajr", - "depends": ["dplyr", "PRROC"] + "depends": ["PRROC", "dplyr"] }, "usemodels": { "name": "usemodels", @@ -121587,8 +122853,8 @@ }, "usethis": { "name": "usethis", - "version": "2.2.3", - "sha256": "1cyy1k5iansg63ziph4w76kzl59dgmam7m2wp6sz9d93bjcrh34d", + "version": "3.0.0", + "sha256": "1dfcyxvw95lhm4giarsw266833sfbckk44nddjqpxqxarvwm1y4q", "depends": ["cli", "clipr", "crayon", "curl", "desc", "fs", "gert", "gh", "glue", "jsonlite", "lifecycle", "purrr", "rappdirs", "rlang", "rprojroot", "rstudioapi", "whisker", "withr", "yaml"] }, "usfertilizer": { @@ -121607,7 +122873,7 @@ "name": "usincometaxes", "version": "0.7.1", "sha256": "1ryml266c7zbzlh5rq2h6gy8flchrjbrlapsy2vvc9s5mwc58vaj", - "depends": ["tibble", "V8", "vroom"] + "depends": ["V8", "tibble", "vroom"] }, "uskewFactors": { "name": "uskewFactors", @@ -121649,7 +122915,7 @@ "name": "ustyc", "version": "1.0.0", "sha256": "1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4", - "depends": ["plyr", "XML"] + "depends": ["XML", "plyr"] }, "utc": { "name": "utc", @@ -121697,18 +122963,18 @@ "name": "utilsIPEA", "version": "0.0.6", "sha256": "07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7", - "depends": ["data_table", "dplyr", "RCurl", "stringdist", "stringr"] + "depends": ["RCurl", "data_table", "dplyr", "stringdist", "stringr"] }, "utiml": { "name": "utiml", "version": "0.1.7", "sha256": "16l64scyipj7plwyv6whv3h040sgvzxx43jhjxyhrcdci4pqwh94", - "depends": ["mldr", "ROCR"] + "depends": ["ROCR", "mldr"] }, "uuid": { "name": "uuid", - "version": "1.2-0", - "sha256": "1z9a4b7hkymkwjq69d00myy5xw8kl9g99f4m2y4lxqqjz0a0lwbk", + "version": "1.2-1", + "sha256": "15jbzj0i4qphakbi8s9yk55lm8z9s2vhgp5bj77sfvkx7mrlj3pr", "depends": [] }, "uwedragon": { @@ -121721,7 +122987,7 @@ "name": "uwot", "version": "0.2.2", "sha256": "1lbckamb2hk24qxcvchdfid982cvcz64j9hvdnrx8c4ms91qr4yr", - "depends": ["dqrng", "FNN", "irlba", "Matrix", "Rcpp", "RcppAnnoy", "RcppProgress", "RSpectra"] + "depends": ["FNN", "Matrix", "RSpectra", "Rcpp", "RcppAnnoy", "RcppProgress", "dqrng", "irlba"] }, "uxr": { "name": "uxr", @@ -121733,13 +122999,13 @@ "name": "vDiveR", "version": "1.2.1", "sha256": "1rxygl5micg07p7la9wyvp4dmfwkjdbhqp660mrq6a3drr4x5bj2", - "depends": ["dplyr", "DT", "gghalves", "ggplot2", "ggpubr", "ggtext", "gridExtra", "magrittr", "maps", "plyr", "readr", "rentrez", "rlang", "scales", "stringr", "tidyr"] + "depends": ["DT", "dplyr", "gghalves", "ggplot2", "ggpubr", "ggtext", "gridExtra", "magrittr", "maps", "plyr", "readr", "rentrez", "rlang", "scales", "stringr", "tidyr"] }, "vICC": { "name": "vICC", "version": "1.0.0", "sha256": "13lcs7wwj1xfbjf3q7r8ssf00jg5hr1vjp2pyw0r42iz7mx47xjv", - "depends": ["coda", "ggplot2", "nlme", "Rdpack", "rjags"] + "depends": ["Rdpack", "coda", "ggplot2", "nlme", "rjags"] }, "vMF": { "name": "vMF", @@ -121757,7 +123023,7 @@ "name": "vaccine", "version": "1.2.1", "sha256": "0pqgavah2bjb0mw8irgri9sglaff3assx10xmhqnixb4jig8d87r", - "depends": ["dplyr", "e1071", "fdrtool", "gam", "ggplot2", "ggpubr", "ranger", "rlang", "Rsolnp", "simest", "SuperLearner", "survival", "survML", "truncnorm"] + "depends": ["Rsolnp", "SuperLearner", "dplyr", "e1071", "fdrtool", "gam", "ggplot2", "ggpubr", "ranger", "rlang", "simest", "survML", "survival", "truncnorm"] }, "vacuum": { "name": "vacuum", @@ -121793,7 +123059,7 @@ "name": "vagam", "version": "1.1", "sha256": "1bgpf0z23yqyaz7dfmqilyqvr5v4w891027xrlr0mk9grj4srmiq", - "depends": ["gamm4", "Matrix", "mgcv", "mvtnorm", "truncnorm"] + "depends": ["Matrix", "gamm4", "mgcv", "mvtnorm", "truncnorm"] }, "valaddin": { "name": "valaddin", @@ -121835,7 +123101,7 @@ "name": "validata", "version": "0.1.0", "sha256": "01ghnkkhqgjllpwdvphcqymps7jq3wd919rplk092iiwwq1mpb9m", - "depends": ["badger", "BBmisc", "data_table", "dplyr", "framecleaner", "gtools", "janitor", "listviewer", "magrittr", "purrr", "rlang", "rlist", "scales", "stringr", "tibble", "tidyr", "tidyselect"] + "depends": ["BBmisc", "badger", "data_table", "dplyr", "framecleaner", "gtools", "janitor", "listviewer", "magrittr", "purrr", "rlang", "rlist", "scales", "stringr", "tibble", "tidyr", "tidyselect"] }, "validate": { "name": "validate", @@ -121847,7 +123113,7 @@ "name": "validateIt", "version": "1.2.1", "sha256": "16lcbn853rfnyh8hlvjdxh4abx6wkzsn876fh4mlfkpbcrnmp0ps", - "depends": ["here", "pyMTurkR", "rlang", "SnowballC", "tm"] + "depends": ["SnowballC", "here", "pyMTurkR", "rlang", "tm"] }, "validatesuggest": { "name": "validatesuggest", @@ -121865,7 +123131,7 @@ "name": "validmind", "version": "0.1.1", "sha256": "1rj93fgkix3xr1lla286whf06pnhs0n9hz23s85yn9155f7xgndk", - "depends": ["base64enc", "dplyr", "DT", "glue", "htmltools", "plotly", "reticulate", "rmarkdown"] + "depends": ["DT", "base64enc", "dplyr", "glue", "htmltools", "plotly", "reticulate", "rmarkdown"] }, "valmetrics": { "name": "valmetrics", @@ -121889,7 +123155,7 @@ "name": "valr", "version": "0.8.1", "sha256": "1pp8naglh26yi8c2p15arx8jkj3jyslzw7j3n5bnzngdpfprk3as", - "depends": ["broom", "cli", "dplyr", "ggplot2", "lifecycle", "Rcpp", "readr", "rlang", "rtracklayer", "stringr", "tibble"] + "depends": ["Rcpp", "broom", "cli", "dplyr", "ggplot2", "lifecycle", "readr", "rlang", "rtracklayer", "stringr", "tibble"] }, "valueEQ5D": { "name": "valueEQ5D", @@ -121919,7 +123185,7 @@ "name": "vampyr", "version": "1.1.1", "sha256": "137sdv4shmjg1cpndjknrys2jkvyq3p9l11nrdh0bzp9xxc1wkh1", - "depends": ["corpcor", "EFA_MRFA", "fungible", "GPArotation", "lavaan", "moments", "PCovR", "psych", "semPlot"] + "depends": ["EFA_MRFA", "GPArotation", "PCovR", "corpcor", "fungible", "lavaan", "moments", "psych", "semPlot"] }, "vandalico": { "name": "vandalico", @@ -121943,19 +123209,19 @@ "name": "vanquish", "version": "1.0.0", "sha256": "01di1j36npl7vnyhgsagvyf6j8bxcw867dwf9dgi7l1328s7lf0l", - "depends": ["changepoint", "e1071", "ggplot2", "VGAM"] + "depends": ["VGAM", "changepoint", "e1071", "ggplot2"] }, "vapour": { "name": "vapour", "version": "0.10.0", "sha256": "18icwn62mpjjrfn7y19svyipq1xziz3vag5vmgp7wxy5i8q5kvch", - "depends": ["jsonlite", "Rcpp"] + "depends": ["Rcpp", "jsonlite"] }, "varEst": { "name": "varEst", "version": "0.1.0", "sha256": "0i6nsxl5w4zipzrmdvx8plmxr33n405w2qhks3s7zzs3kcys32v6", - "depends": ["caret", "glmnet", "lm_beta", "SAM"] + "depends": ["SAM", "caret", "glmnet", "lm_beta"] }, "varImp": { "name": "varImp", @@ -121979,7 +123245,7 @@ "name": "varTestnlme", "version": "1.3.5", "sha256": "1qxbx1hwylybm4nza6a7bqgck0krvbcvwabp1710dhkk7skfgk8x", - "depends": ["alabama", "anocva", "corpcor", "doParallel", "foreach", "lme4", "lmeresampler", "Matrix", "merDeriv", "msm", "mvtnorm", "nlme", "quadprog", "saemix"] + "depends": ["Matrix", "alabama", "anocva", "corpcor", "doParallel", "foreach", "lme4", "lmeresampler", "merDeriv", "msm", "mvtnorm", "nlme", "quadprog", "saemix"] }, "varband": { "name": "varband", @@ -121997,13 +123263,13 @@ "name": "varbvs", "version": "2.6-10", "sha256": "0sjna51mz433s24dkjcq2aal6ss41gx6xlm2l45rm6s1q1k4m87f", - "depends": ["lattice", "latticeExtra", "Matrix", "nor1mix", "Rcpp"] + "depends": ["Matrix", "Rcpp", "lattice", "latticeExtra", "nor1mix"] }, "varclust": { "name": "varclust", "version": "0.9.4", "sha256": "0knmfq3pn38j8p29j6sqapdv3g5335si3gwiw932ml5z49a8ga5m", - "depends": ["doParallel", "doRNG", "foreach", "pesel", "RcppEigen"] + "depends": ["RcppEigen", "doParallel", "doRNG", "foreach", "pesel"] }, "vardiag": { "name": "vardiag", @@ -122015,7 +123281,7 @@ "name": "vardpoor", "version": "0.20.1", "sha256": "0jqls76xhhxc5hppy3pq5wkj9gjx3g3pzfbhnis7k10ysn76a1qj", - "depends": ["data_table", "foreach", "laeken", "MASS", "stringr", "surveyplanning"] + "depends": ["MASS", "data_table", "foreach", "laeken", "stringr", "surveyplanning"] }, "varhandle": { "name": "varhandle", @@ -122039,7 +123305,7 @@ "name": "varian", "version": "0.2.2", "sha256": "0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i", - "depends": ["Formula", "ggplot2", "gridExtra", "MASS", "rstan"] + "depends": ["Formula", "MASS", "ggplot2", "gridExtra", "rstan"] }, "variantspark": { "name": "variantspark", @@ -122063,13 +123329,13 @@ "name": "varitas", "version": "0.0.2", "sha256": "16y0fcisdf4pypwqshy9c45v57axa25k8cpp1pr2ij95zycs3g1k", - "depends": ["assertthat", "doParallel", "dplyr", "foreach", "magrittr", "openxlsx", "stringr", "tidyr", "VennDiagram", "yaml"] + "depends": ["VennDiagram", "assertthat", "doParallel", "dplyr", "foreach", "magrittr", "openxlsx", "stringr", "tidyr", "yaml"] }, "varjmcm": { "name": "varjmcm", "version": "0.1.1", "sha256": "1xgy3n57pxhv6wrsw9h4dranxbw6hdpm1f9ra3kwlzrpz5c3289x", - "depends": ["expm", "jmcm", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "expm", "jmcm"] }, "varoc": { "name": "varoc", @@ -122087,25 +123353,19 @@ "name": "vars", "version": "1.6-1", "sha256": "1i8ldzb44wnlaww8a0k6sgfj1khgah5v445gi45d7vgv68rg0gcv", - "depends": ["lmtest", "MASS", "sandwich", "strucchange", "urca"] - }, - "varsExplore": { - "name": "varsExplore", - "version": "0.3.0", - "sha256": "0d18wqq7fbs5ljdphsdgqmv8ab0wrzzykjhf4lqksi7n78s1fa2r", - "depends": ["dplyr", "DT", "glue", "magrittr", "purrr", "rio", "rstudioapi", "stringr", "tidyr"] + "depends": ["MASS", "lmtest", "sandwich", "strucchange", "urca"] }, "vartest": { "name": "vartest", "version": "1.2", "sha256": "0bnfyp6qh19nxsl9hzkz7ib9jgbv00vywzqwz6jvvcrxlii7023z", - "depends": ["psych", "SuppDists"] + "depends": ["SuppDists", "psych"] }, "varycoef": { "name": "varycoef", "version": "0.3.4", "sha256": "1dfych3qhqq4qadizxjgh4lswnm47m2g59gv14c8j349ji94i8qh", - "depends": ["glmnet", "lhs", "mlr", "mlrMBO", "optimParallel", "ParamHelpers", "pbapply", "smoof", "spam"] + "depends": ["ParamHelpers", "glmnet", "lhs", "mlr", "mlrMBO", "optimParallel", "pbapply", "smoof", "spam"] }, "vasicek": { "name": "vasicek", @@ -122117,7 +123377,7 @@ "name": "vasicekreg", "version": "1.0.1", "sha256": "0hlac3p6mm7x88wdlqc93byx1s2a287kvhwzhz01pz4anap30683", - "depends": ["gamlss", "gamlss_dist", "mvtnorm", "Rcpp"] + "depends": ["Rcpp", "gamlss", "gamlss_dist", "mvtnorm"] }, "vatcheckapi": { "name": "vatcheckapi", @@ -122129,13 +123389,13 @@ "name": "vaultr", "version": "1.2.0", "sha256": "1dbwr50jsx8m615wdlk437ac23y4dk9iqcihlbnail470hfdq5gw", - "depends": ["getPass", "httr", "jsonlite", "R6"] + "depends": ["R6", "getPass", "httr", "jsonlite"] }, "vaxpmx": { "name": "vaxpmx", "version": "0.0.3", "sha256": "0slbp5iaafwa3bw8mrzraq8yvklvyji1r4bvmvwlmgr99yk2kgk4", - "depends": ["dplyr", "MASS"] + "depends": ["MASS", "dplyr"] }, "vcPB": { "name": "vcPB", @@ -122147,25 +123407,25 @@ "name": "vccp", "version": "0.1.1", "sha256": "1c0mk46c74kj5y9rfniywbxxmwb2z16szzpq6b2sw8q0qi1cf5ji", - "depends": ["mosum", "mvtnorm", "VineCopula"] + "depends": ["VineCopula", "mosum", "mvtnorm"] }, "vcd": { "name": "vcd", "version": "1.4-12", "sha256": "127dkln826ah5ydp3pmd5bqyns9m9m6yrjnmn7fir4r9al8yycf9", - "depends": ["colorspace", "lmtest", "MASS"] + "depends": ["MASS", "colorspace", "lmtest"] }, "vcdExtra": { "name": "vcdExtra", "version": "0.8-5", "sha256": "09kpfnyi6q7xn4x6f7i3k8g6f2fdnm7kk81lxjmlhhn36jxc2p2i", - "depends": ["ca", "dplyr", "glue", "gnm", "here", "MASS", "purrr", "readxl", "stringr", "tidyr", "vcd"] + "depends": ["MASS", "ca", "dplyr", "glue", "gnm", "here", "purrr", "readxl", "stringr", "tidyr", "vcd"] }, "vcfR": { "name": "vcfR", "version": "1.15.0", "sha256": "1yj91cphin232m09wrpj8l27vxblyryh658siakz55hxjs5y85yz", - "depends": ["ape", "dplyr", "magrittr", "memuse", "pinfsc50", "Rcpp", "stringr", "tibble", "vegan", "viridisLite"] + "depends": ["Rcpp", "ape", "dplyr", "magrittr", "memuse", "pinfsc50", "stringr", "tibble", "vegan", "viridisLite"] }, "vcfppR": { "name": "vcfppR", @@ -122175,9 +123435,9 @@ }, "vcmeta": { "name": "vcmeta", - "version": "1.3.0", - "sha256": "11z1kfmd2kamkf39gr5ppry1g4pgrpqnyzbc2bgd1yay6yjhl93z", - "depends": ["ggplot2", "mathjaxr", "Rdpack"] + "version": "1.4.0", + "sha256": "0122xzfwsvxv0rwdaf331nwlikcwm409lya9wm8k037dk46gx2w3", + "depends": ["Rdpack", "ggplot2", "mathjaxr"] }, "vcov": { "name": "vcov", @@ -122189,13 +123449,13 @@ "name": "vcpen", "version": "1.9", "sha256": "0gg5ln9r7i8rh91pf7789fic4aah22jc259qyg606bax2w57qmi5", - "depends": ["knitr", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "knitr"] }, "vcr": { "name": "vcr", - "version": "1.2.2", - "sha256": "0vqq4lwgk9ss3x2vhkmgcymdwfppxjbaycm7pwik70sz9pkdk2d4", - "depends": ["base64enc", "crul", "httr", "R6", "rprojroot", "urltools", "webmockr", "yaml"] + "version": "1.6.0", + "sha256": "0jp6p9k6y2rshxyq5hb3gv3idk2l426cizy1j2aqcz3s503axsxf", + "depends": ["R6", "base64enc", "crul", "httr", "httr2", "rprojroot", "urltools", "webmockr", "yaml"] }, "vcrpart": { "name": "vcrpart", @@ -122249,7 +123509,7 @@ "name": "veccompare", "version": "0.1.0", "sha256": "03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1", - "depends": ["corrplot", "gtools", "pander", "purrr", "qgraph", "reshape2", "VennDiagram"] + "depends": ["VennDiagram", "corrplot", "gtools", "pander", "purrr", "qgraph", "reshape2"] }, "vecsets": { "name": "vecsets", @@ -122265,15 +123525,15 @@ }, "vectorsurvR": { "name": "vectorsurvR", - "version": "0.1.0", - "sha256": "00j2blaf5l8ancn4yjfywmw4l1kysxqkqfd5pg4klcr0h4idcnqd", - "depends": ["dplyr", "DT", "ggplot2", "httr", "jsonlite", "kableExtra", "knitr", "lubridate", "magrittr", "plotly", "rstudioapi", "stringr", "tidyr"] + "version": "0.2.0", + "sha256": "17h634yb4fqc3xgp48qxvrfzn0ly2x91j76i8cap90rhidq0vqxx", + "depends": ["DT", "dplyr", "ggplot2", "httr", "jsonlite", "kableExtra", "knitr", "lubridate", "magrittr", "plotly", "rstudioapi", "stringr", "tidyr"] }, "vectorwavelet": { "name": "vectorwavelet", "version": "0.1.0", "sha256": "1z0gl28hgrqgx0ynv248a80fh190pm15c9cg1l1665acrw62kqs7", - "depends": ["biwavelet", "fields", "foreach", "iterators", "maps", "Rcpp", "spam"] + "depends": ["Rcpp", "biwavelet", "fields", "foreach", "iterators", "maps", "spam"] }, "vegalite": { "name": "vegalite", @@ -122285,7 +123545,7 @@ "name": "vegan", "version": "2.6-6.1", "sha256": "0q0bp7xxmab1gcqk8wwm81sdvhccdvz5vqyn0grbwfb619q5wakx", - "depends": ["cluster", "lattice", "MASS", "mgcv", "permute"] + "depends": ["MASS", "cluster", "lattice", "mgcv", "permute"] }, "vegan3d": { "name": "vegan3d", @@ -122309,7 +123569,7 @@ "name": "vegdata", "version": "0.9.12", "sha256": "1fgha0sxgymiqnr6gwa3pjmbvb76iwxnpxs666zifscch4fz3z99", - "depends": ["curl", "DBI", "dbplyr", "dplyr", "foreign", "hoardr", "httr", "indicspecies", "magrittr", "plyr", "RSQLite", "stringr", "xml2"] + "depends": ["DBI", "RSQLite", "curl", "dbplyr", "dplyr", "foreign", "hoardr", "httr", "indicspecies", "magrittr", "plyr", "stringr", "xml2"] }, "vegperiod": { "name": "vegperiod", @@ -122373,8 +123633,8 @@ }, "verbalisr": { "name": "verbalisr", - "version": "0.5.2", - "sha256": "1h00dwfsw2k5x2m0mpwh2ni8wsvixv7i4ps4vl4pmhq73xxx3f9a", + "version": "0.6.0", + "sha256": "1i324dmcbm9pgkmb0v21x3z89vvb6805ziq059xf49p3m6m3ad8s", "depends": ["pedtools", "ribd"] }, "verhoeff": { @@ -122387,7 +123647,7 @@ "name": "verification", "version": "1.42", "sha256": "0pdqvg7cm9gam49lhc2xy42w788hh2zd06apydc95q2gj95xnaiw", - "depends": ["boot", "CircStats", "dtw", "fields", "MASS"] + "depends": ["CircStats", "MASS", "boot", "dtw", "fields"] }, "vermeulen": { "name": "vermeulen", @@ -122399,7 +123659,7 @@ "name": "versioning", "version": "0.1.0", "sha256": "0r4ffd1s9warfan7ldcd6sn98qimsllf77dhxfygblr8spxcl7h5", - "depends": ["assertthat", "data_table", "foreign", "glue", "haven", "R6", "sf", "terra", "yaml"] + "depends": ["R6", "assertthat", "data_table", "foreign", "glue", "haven", "sf", "terra", "yaml"] }, "versions": { "name": "versions", @@ -122433,8 +123693,8 @@ }, "vetr": { "name": "vetr", - "version": "0.2.16", - "sha256": "0dpk2mfa6xk8b0zvanymgr00mydjvqmmax6n7cfvxd0gviwbfap4", + "version": "0.2.18", + "sha256": "0ymbv6d1xvsnpvhn6pniiwxw9fjyxy8bahkwfh56rxqlv9qx3pi0", "depends": [] }, "vfcp": { @@ -122459,7 +123719,7 @@ "name": "vglmer", "version": "1.0.3", "sha256": "0wfl1n6xp6qiv34d4p5qy3mwzrvf3n324hrlksdpa68j5xfw9w0f", - "depends": ["CholWishart", "lme4", "lmtest", "Matrix", "mgcv", "mvtnorm", "Rcpp", "RcppEigen"] + "depends": ["CholWishart", "Matrix", "Rcpp", "RcppEigen", "lme4", "lmtest", "mgcv", "mvtnorm"] }, "vhcub": { "name": "vhcub", @@ -122489,7 +123749,7 @@ "name": "vici", "version": "0.7.3", "sha256": "0gghmn7bs4wr2r24s794ljvz2r3qv0clvgj54b6hxmgn1b48bxg0", - "depends": ["cowplot", "DT", "ggplot2", "ggpubr", "nlme", "numDeriv", "RColorBrewer", "scales", "shiny", "shinyWidgets", "stringr", "tidyr"] + "depends": ["DT", "RColorBrewer", "cowplot", "ggplot2", "ggpubr", "nlme", "numDeriv", "scales", "shiny", "shinyWidgets", "stringr", "tidyr"] }, "video": { "name": "video", @@ -122513,13 +123773,13 @@ "name": "viewpoly", "version": "0.4.1", "sha256": "1c97khxsfnml21wh8np4qp7w2w31zxw72dl5vy25jjpx06dbp814", - "depends": ["abind", "config", "dplyr", "DT", "ggplot2", "ggpubr", "golem", "hidecan", "JBrowseR", "markdown", "plotly", "purrr", "reshape2", "shiny", "shinydashboard", "shinyjs", "shinythemes", "shinyWidgets", "tidyr", "vroom"] + "depends": ["DT", "JBrowseR", "abind", "config", "dplyr", "ggplot2", "ggpubr", "golem", "hidecan", "markdown", "plotly", "purrr", "reshape2", "shiny", "shinyWidgets", "shinydashboard", "shinyjs", "shinythemes", "tidyr", "vroom"] }, "viewscape": { "name": "viewscape", "version": "1.0.0", "sha256": "1hjr6r6p5n4knmbdd38dpdlwdpycq8k5im0i0rfk28xnix7769mv", - "depends": ["dplyr", "ForestTools", "pbmcapply", "Rcpp", "rlang", "sf", "sp", "terra"] + "depends": ["ForestTools", "Rcpp", "dplyr", "pbmcapply", "rlang", "sf", "sp", "terra"] }, "viking": { "name": "viking", @@ -122537,13 +123797,13 @@ "name": "vimp", "version": "2.3.3", "sha256": "069pcxzavi213idpslnc1skylsb1wn6xldajnn54prlwq9hkfb19", - "depends": ["boot", "data_table", "dplyr", "magrittr", "MASS", "rlang", "ROCR", "SuperLearner", "tibble"] + "depends": ["MASS", "ROCR", "SuperLearner", "boot", "data_table", "dplyr", "magrittr", "rlang", "tibble"] }, "vimpclust": { "name": "vimpclust", "version": "0.1.0", "sha256": "0ly7piz7q88sh2g7zq5b2pqph9467b4fclgq9amm0m7xc8vrv4f9", - "depends": ["ggplot2", "mclust", "PCAmixdata", "Polychrome", "rlang"] + "depends": ["PCAmixdata", "Polychrome", "ggplot2", "mclust", "rlang"] }, "vindecodr": { "name": "vindecodr", @@ -122555,13 +123815,13 @@ "name": "vinereg", "version": "0.10.0", "sha256": "0r4xg3a2mk7030z2vc1w5g0390vkhbnq757cj9j5imki2ii2xfnz", - "depends": ["assertthat", "BH", "kde1d", "Rcpp", "RcppEigen", "RcppThread", "rvinecopulib", "wdm"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppThread", "assertthat", "kde1d", "rvinecopulib", "wdm"] }, "vines": { "name": "vines", "version": "1.1.5", "sha256": "057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1", - "depends": ["ADGofTest", "copula", "cubature", "TSP"] + "depends": ["ADGofTest", "TSP", "copula", "cubature"] }, "violinplotter": { "name": "violinplotter", @@ -122571,8 +123831,8 @@ }, "vioplot": { "name": "vioplot", - "version": "0.4.0", - "sha256": "1db7g0378jbcd6ssb7afff4y4r0v472qnb625hfwixx4wf1v8aap", + "version": "0.5.0", + "sha256": "0r89ac9ilz1jwwfgylzscg3c8is7dsy3c4dcl89ksmqhp3692kmh", "depends": ["sm", "zoo"] }, "vip": { @@ -122589,9 +123849,9 @@ }, "viraldomain": { "name": "viraldomain", - "version": "0.0.3", - "sha256": "10lk3rjfr2faj8wdxd0v1c0xk22bzsrl1arz6ab5xxsd0zzc9kxh", - "depends": ["applicable", "dplyr", "earth", "ggplot2", "kknn", "nnet", "parsnip", "recipes", "vdiffr", "workflows"] + "version": "0.0.5", + "sha256": "0cm6k88jr1vyc2k61cpkj49kcha1v9cpkafslzdh8zy5ngbsfy1j", + "depends": ["applicable", "dplyr", "ggplot2", "parsnip", "recipes", "tidyselect", "workflows"] }, "viralmodels": { "name": "viralmodels", @@ -122603,7 +123863,7 @@ "name": "viralx", "version": "1.3.0", "sha256": "1449r74g4q7qigyqb21sasdyr80542b4lfavjszh2s5bd8pkc8di", - "depends": ["DALEX", "DALEXtra", "dplyr", "earth", "Formula", "kknn", "parsnip", "plotmo", "plotrix", "recipes", "rsample", "TeachingDemos", "vdiffr", "workflows"] + "depends": ["DALEX", "DALEXtra", "Formula", "TeachingDemos", "dplyr", "earth", "kknn", "parsnip", "plotmo", "plotrix", "recipes", "rsample", "vdiffr", "workflows"] }, "viridis": { "name": "viridis", @@ -122633,7 +123893,7 @@ "name": "virtuoso", "version": "0.1.8", "sha256": "1smb8sjfqcp3jflplgf92swasxzrp72fnnqwyisf87pjknm91qsc", - "depends": ["curl", "DBI", "digest", "fs", "ini", "odbc", "processx", "ps", "rappdirs"] + "depends": ["DBI", "curl", "digest", "fs", "ini", "odbc", "processx", "ps", "rappdirs"] }, "virustotal": { "name": "virustotal", @@ -122653,12 +123913,6 @@ "sha256": "1lfvihny8r8x0qhzlqhq3wysijypkqz3mgd70j9cy71m5hhypx6z", "depends": ["cli", "dplyr", "generics", "glue", "lifecycle", "omopgenerics", "rlang", "stringr", "tidyr"] }, - "visR": { - "name": "visR", - "version": "0.4.1", - "sha256": "1ra2fky23fv3rc9gj4zg64s2c2xcc52whf24wp2nfmg1f0nr278g", - "depends": ["broom", "cowplot", "dplyr", "DT", "forcats", "ggplot2", "gridExtra", "gt", "gtable", "kableExtra", "knitr", "lifecycle", "rlang", "survival", "tibble", "tidycmprsk", "tidyr"] - }, "visStatistics": { "name": "visStatistics", "version": "0.1.1", @@ -122675,13 +123929,13 @@ "name": "visa", "version": "0.1.0", "sha256": "1mx7nbbpxs4fdp781a75qvffa42dx2n6anslbfs9bnprmvzmljqr", - "depends": ["ggplot2", "ggpmisc", "Matrix", "RColorBrewer", "reshape2"] + "depends": ["Matrix", "RColorBrewer", "ggplot2", "ggpmisc", "reshape2"] }, "visaOTR": { "name": "visaOTR", "version": "0.1.0", "sha256": "12ix8ljbykwf493hw6npli2ad665jip2mzb8p25j5v10f8ij88qm", - "depends": ["e1071", "kernlab", "Matrix", "mboost", "randomForest", "Rglpk", "xgboost"] + "depends": ["Matrix", "Rglpk", "e1071", "kernlab", "mboost", "randomForest", "xgboost"] }, "visachartR": { "name": "visachartR", @@ -122693,19 +123947,19 @@ "name": "visae", "version": "0.2.0", "sha256": "0ycwb380z8nb646w7w42952lwvdi8prmph7yv1lraswvp4wjfx3p", - "depends": ["ca", "dplyr", "DT", "ggplot2", "ggrepel", "magrittr", "rlang", "shiny", "shinyjs", "tidyr"] + "depends": ["DT", "ca", "dplyr", "ggplot2", "ggrepel", "magrittr", "rlang", "shiny", "shinyjs", "tidyr"] }, "viscomp": { "name": "viscomp", "version": "1.0.0", "sha256": "18s9qapznc50xwjr3lx48nsn9prji8n13byqzvhy151wm4anak7k", - "depends": ["circlize", "dplyr", "ggExtra", "ggnewscale", "ggplot2", "Hmisc", "MASS", "netmeta", "plyr", "qgraph", "reshape2", "tibble", "tidyr"] + "depends": ["Hmisc", "MASS", "circlize", "dplyr", "ggExtra", "ggnewscale", "ggplot2", "netmeta", "plyr", "qgraph", "reshape2", "tibble", "tidyr"] }, "viscomplexr": { "name": "viscomplexr", "version": "1.1.1", "sha256": "1b45yi5xv4vq52pfa064ll3ghxgkwpbknzq94gg60vcvb7spd0if", - "depends": ["doParallel", "foreach", "plotrix", "Rcpp", "Rdpack", "scales"] + "depends": ["Rcpp", "Rdpack", "doParallel", "foreach", "plotrix", "scales"] }, "visdat": { "name": "visdat", @@ -122717,7 +123971,7 @@ "name": "visit", "version": "2.2", "sha256": "0mrwah122w9dyivyzs8xlv6vq9w8bpr468zjjw5q974wk7h31mk4", - "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "sqldf", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "rstan", "rstantools", "sqldf"] }, "vismeteor": { "name": "vismeteor", @@ -122735,7 +123989,7 @@ "name": "vistime", "version": "1.2.4", "sha256": "14nm2p8yyl0zcf4al31cvnji4a9fi6zs1hvcjpa7dcyjdxd6yfyi", - "depends": ["assertthat", "ggplot2", "ggrepel", "plotly", "RColorBrewer", "rlang"] + "depends": ["RColorBrewer", "assertthat", "ggplot2", "ggrepel", "plotly", "rlang"] }, "vistla": { "name": "vistla", @@ -122753,7 +124007,7 @@ "name": "visualFields", "version": "1.0.1", "sha256": "1z62xappwjdv9f7ql5spydkb626rdj3hvpvzy3d71fwm0y3qwki3", - "depends": ["boot", "combinat", "deldir", "dplyr", "DT", "gtools", "Hmisc", "htmlTable", "oro_dicom", "plotrix", "polyclip", "pracma", "rlang", "shiny", "shinyjs", "XML"] + "depends": ["DT", "Hmisc", "XML", "boot", "combinat", "deldir", "dplyr", "gtools", "htmlTable", "oro_dicom", "plotrix", "polyclip", "pracma", "rlang", "shiny", "shinyjs"] }, "visualize": { "name": "visualize", @@ -122761,29 +124015,23 @@ "sha256": "0bsdyqakidgdgxhzyl6w0pg3mnkj84550c4s7dwcwjjqqjsr9bj1", "depends": [] }, - "visualpred": { - "name": "visualpred", - "version": "0.1.0", - "sha256": "19jq9h9kiv4vbzqz8zrv5gqb1bprq5jy7mcxvdwpfnna2rja6q4z", - "depends": ["data_table", "dplyr", "e1071", "FactoMineR", "gbm", "ggplot2", "ggrepel", "magrittr", "MASS", "MBA", "mltools", "nnet", "pROC", "randomForest"] - }, "visvow": { "name": "visvow", "version": "1.3.11", "sha256": "1my0gvp63lri56hkqrs7xsr5i6ji9w17xm94mrrc9lgwy5sj3vf0", - "depends": ["Cairo", "dplyr", "DT", "effectsize", "formattable", "ggdendro", "ggplot2", "ggrepel", "MASS", "PBSmapping", "plot3D", "plyr", "pracma", "psych", "Rdpack", "readxl", "Rtsne", "shiny", "shinyBS", "shinybusy", "splitstackshape", "svglite", "tidyr", "tikzDevice", "vegan", "WriteXLS"] + "depends": ["Cairo", "DT", "MASS", "PBSmapping", "Rdpack", "Rtsne", "WriteXLS", "dplyr", "effectsize", "formattable", "ggdendro", "ggplot2", "ggrepel", "plot3D", "plyr", "pracma", "psych", "readxl", "shiny", "shinyBS", "shinybusy", "splitstackshape", "svglite", "tidyr", "tikzDevice", "vegan"] }, "visxhclust": { "name": "visxhclust", "version": "1.1.0", "sha256": "1wx16mg5g58p4mgf5y776i5ahgpqqjy4wbfqhfjph36mrhs6qr22", - "depends": ["bsplus", "circlize", "cluster", "clValid", "ComplexHeatmap", "dendextend", "dplyr", "DT", "dunn_test", "fastcluster", "ggplot2", "kableExtra", "knitr", "patchwork", "RColorBrewer", "readr", "shiny", "shinycssloaders", "shinyhelper", "tidyr"] + "depends": ["ComplexHeatmap", "DT", "RColorBrewer", "bsplus", "circlize", "clValid", "cluster", "dendextend", "dplyr", "dunn_test", "fastcluster", "ggplot2", "kableExtra", "knitr", "patchwork", "readr", "shiny", "shinycssloaders", "shinyhelper", "tidyr"] }, "vita": { "name": "vita", "version": "1.0.0", "sha256": "114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v", - "depends": ["randomForest", "Rcpp"] + "depends": ["Rcpp", "randomForest"] }, "vitae": { "name": "vitae", @@ -122793,9 +124041,9 @@ }, "vital": { "name": "vital", - "version": "1.0.0", - "sha256": "0rq7abqpqj5l5vvawj8x0p4bhvs0pcd883xiqbjzc65girn9ffar", - "depends": ["cobs", "distributional", "dplyr", "fable", "fabletools", "future_apply", "generics", "ggplot2", "HMDHFDplus", "mgcv", "patchwork", "progressr", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "tsibble", "vctrs"] + "version": "1.1.0", + "sha256": "0qmqalqzqzzsc8fvzrqj5wzwaw90lf161524wibjzc89knz6z0g4", + "depends": ["HMDHFDplus", "cobs", "distributional", "dplyr", "fable", "fabletools", "future_apply", "generics", "ggplot2", "mgcv", "patchwork", "progressr", "purrr", "rlang", "tibble", "tidyr", "tidyselect", "tsibble", "vctrs"] }, "vitality": { "name": "vitality", @@ -122817,9 +124065,9 @@ }, "vivid": { "name": "vivid", - "version": "0.2.8", - "sha256": "0zl9p8dsrz9lmylnfxj4b50g1lvk7563ss0w3k1pidkwrs4kazin", - "depends": ["colorspace", "condvis2", "DendSer", "dplyr", "flashlight", "GGally", "ggalt", "ggnewscale", "ggplot2", "igraph", "RColorBrewer", "sp"] + "version": "0.2.9", + "sha256": "13iagv585a5z7pggzlcgc8h17r5lx4nq2gljy58238nsi0xc9549", + "depends": ["DendSer", "GGally", "RColorBrewer", "colorspace", "condvis2", "dplyr", "flashlight", "ggalt", "ggnewscale", "ggplot2", "igraph", "sp"] }, "vivo": { "name": "vivo", @@ -122837,13 +124085,13 @@ "name": "vkR", "version": "0.2", "sha256": "1pk444fcw4yyv2dnfrw9vynbpc4gwr5yv9jd41djp9yipdf6d53l", - "depends": ["httr", "jsonlite", "purrr", "XML"] + "depends": ["XML", "httr", "jsonlite", "purrr"] }, "vmdTDNN": { "name": "vmdTDNN", "version": "0.1.1", "sha256": "08bdihlf2lj1wfxilshxww3sav7c35qiqzs468mdahbn4vnzbngr", - "depends": ["forecast", "nnfor", "VMDecomp"] + "depends": ["VMDecomp", "forecast", "nnfor"] }, "vmeasur": { "name": "vmeasur", @@ -122873,25 +124121,25 @@ "name": "voi", "version": "1.0.2", "sha256": "0fxaspvy64791dh9d00slfqi8wwip7353cf68kya0rkm2b12kr4m", - "depends": ["dbarts", "earth", "ggplot2", "gridExtra", "Matrix", "mgcv", "mvtnorm", "posterior", "progress"] + "depends": ["Matrix", "dbarts", "earth", "ggplot2", "gridExtra", "mgcv", "mvtnorm", "posterior", "progress"] }, "voice": { "name": "voice", "version": "0.4.21", "sha256": "0fh1k0596npm6yah992g3hc79g6lh12b7k97nnxlm1pgpdbb503v", - "depends": ["dplyr", "R_utils", "reticulate", "seewave", "tibble", "tidyselect", "tuneR", "wrassp", "zoo"] + "depends": ["R_utils", "dplyr", "reticulate", "seewave", "tibble", "tidyselect", "tuneR", "wrassp", "zoo"] }, "voiceR": { "name": "voiceR", "version": "0.1.0", "sha256": "1bc2h04i9l76wqrw93brg5ivpgd0pq20zq2nq8x7p851jfxz84p4", - "depends": ["doParallel", "DT", "foreach", "FSA", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "gtable", "kableExtra", "knitr", "MASS", "phia", "plotly", "rcompanion", "rlang", "rmarkdown", "seewave", "shiny", "shinyFiles", "shinyjs", "soundgen", "stringr", "tuneR", "xfun"] + "depends": ["DT", "FSA", "MASS", "doParallel", "foreach", "ggplot2", "ggpubr", "ggthemes", "gridExtra", "gtable", "kableExtra", "knitr", "phia", "plotly", "rcompanion", "rlang", "rmarkdown", "seewave", "shiny", "shinyFiles", "shinyjs", "soundgen", "stringr", "tuneR", "xfun"] }, "vol2birdR": { "name": "vol2birdR", - "version": "1.0.2", - "sha256": "1mfyhr3z97b9gayx5fvzbbh85afjam28zcky4l62zgwirv15j5ib", - "depends": ["assertthat", "pkgbuild", "Rcpp", "RcppGSL", "rlang", "withr"] + "version": "1.0.3", + "sha256": "0pryk17cyimli1wgb573kq162pwkxir4nrmp3lbv6f4i61nyxxch", + "depends": ["Rcpp", "RcppGSL", "assertthat", "pkgbuild", "rlang", "withr"] }, "volatilityTrader": { "name": "volatilityTrader", @@ -122903,13 +124151,13 @@ "name": "volcano3D", "version": "2.0.9", "sha256": "1k1n49pzsdkwia09mf9ra75cbnx49q99ygn5c92kyq8kqv83d1w8", - "depends": ["ggplot2", "ggpubr", "htmlwidgets", "magrittr", "matrixTests", "plotly", "Rfast", "rlang"] + "depends": ["Rfast", "ggplot2", "ggpubr", "htmlwidgets", "magrittr", "matrixTests", "plotly", "rlang"] }, "volcanoPlot": { "name": "volcanoPlot", "version": "1.0.0", "sha256": "06nkv56c36wgnb7s6gkpp14syzhm5zm2wdfjx9wamxp5cf0wk3mk", - "depends": ["dplyr", "DT", "fmsb", "ggplot2", "purrr", "shiny", "tidyr"] + "depends": ["DT", "dplyr", "fmsb", "ggplot2", "purrr", "shiny", "tidyr"] }, "volesti": { "name": "volesti", @@ -122939,7 +124187,7 @@ "name": "voronoiTreemap", "version": "0.2.0", "sha256": "1wvnqdrvba4ss4f3k8gzb720irdq2brv2aaq16ywifv8fnjf02r3", - "depends": ["data_tree", "DT", "htmlwidgets", "rlang", "shiny", "shinyjs"] + "depends": ["DT", "data_tree", "htmlwidgets", "rlang", "shiny", "shinyjs"] }, "vortexRdata": { "name": "vortexRdata", @@ -122969,7 +124217,7 @@ "name": "voteSim", "version": "0.1.1", "sha256": "0wqyckpmwwyfmwqhmml62nf781zakbiir727jac1bc1iawxm9y7k", - "depends": ["extraDistr", "GenOrd", "truncnorm"] + "depends": ["GenOrd", "extraDistr", "truncnorm"] }, "voteogram": { "name": "voteogram", @@ -122987,7 +124235,7 @@ "name": "votesys", "version": "0.1.1", "sha256": "1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920", - "depends": ["data_table", "gtools", "Matrix"] + "depends": ["Matrix", "data_table", "gtools"] }, "vottrans": { "name": "vottrans", @@ -123017,7 +124265,7 @@ "name": "vpc", "version": "1.2.2", "sha256": "15s9f6hmqawv2594xqv58hnqg2wm1fm8qaj8h9k4m55cx4sf1hik", - "depends": ["classInt", "dplyr", "ggplot2", "MASS", "readr", "stringr", "survival", "tidyr"] + "depends": ["MASS", "classInt", "dplyr", "ggplot2", "readr", "stringr", "survival", "tidyr"] }, "vprr": { "name": "vprr", @@ -123029,7 +124277,7 @@ "name": "vrnmf", "version": "1.0.2", "sha256": "0n0kmzhygaii9kipcmr943s0vcf8brxgsk25m9illd4fij6nwpp2", - "depends": ["ica", "lpSolveAPI", "Matrix", "nnls", "quadprog"] + "depends": ["Matrix", "ica", "lpSolveAPI", "nnls", "quadprog"] }, "vroom": { "name": "vroom", @@ -123047,7 +124295,7 @@ "name": "vscc", "version": "0.7", "sha256": "082jxk8fw4rplal9672bi6rr1jwpb5h6clrdlv9jj4ffvlbg6vaz", - "depends": ["ManlyMix", "mclust", "MixGHD", "teigen"] + "depends": ["ManlyMix", "MixGHD", "mclust", "teigen"] }, "vsd": { "name": "vsd", @@ -123055,11 +124303,17 @@ "sha256": "18whnvary4glblzx1vxf3yzsllnnnbnyijwhbw7bi3agppnwrf22", "depends": ["dplyr", "flexsurv", "ggplot2", "ggpubr", "magrittr", "muhaz", "survival", "survminer"] }, + "vse4ts": { + "name": "vse4ts", + "version": "1.0.0", + "sha256": "1js4iawg3c3hcflc7xmy8iif95l545mgg4cc5cmkp8jlfcdmbrig", + "depends": [] + }, "vsgoftest": { "name": "vsgoftest", "version": "1.0-1", "sha256": "0vypi4cf04bljmx3jwq3ixs86ivd6p7a825ik189y71fyqg9g70v", - "depends": ["fitdistrplus", "Rcpp"] + "depends": ["Rcpp", "fitdistrplus"] }, "vsmi": { "name": "vsmi", @@ -123071,19 +124325,19 @@ "name": "vsp", "version": "0.1.1", "sha256": "0aa3vqzazh0x5irbmqh9ac1xiprwnbgbrjl9bybxzynl91hwg9yw", - "depends": ["ggplot2", "glue", "invertiforms", "LRMF3", "magrittr", "Matrix", "rlang", "RSpectra", "tibble", "withr"] + "depends": ["LRMF3", "Matrix", "RSpectra", "ggplot2", "glue", "invertiforms", "magrittr", "rlang", "tibble", "withr"] }, "vstdct": { "name": "vstdct", "version": "0.2", "sha256": "0g26cplp5vjppyw8w37vdy3wah3i9wi14j64vl7i8d2fjbhqhqxp", - "depends": ["dtt", "MASS", "nlme"] + "depends": ["MASS", "dtt", "nlme"] }, "vstsr": { "name": "vstsr", "version": "1.1.0", "sha256": "071nfxkwwpbp2d8khxq7d1pp268pa1fcfj619bs6xwg4wk9srr3k", - "depends": ["httr", "jsonlite", "R6", "RCurl"] + "depends": ["R6", "RCurl", "httr", "jsonlite"] }, "vtable": { "name": "vtable", @@ -123143,7 +124397,7 @@ "name": "vvdoctor", "version": "0.0.1", "sha256": "1sxj7a6pg1kynwsb1fc28l3ipj3jf5azn4cyck0489hsxqnyjn5p", - "depends": ["datamods", "DescTools", "DT", "exact2x2", "irr", "magrittr", "rintrojs", "rstatix", "shiny", "shinyjs", "shinyWidgets"] + "depends": ["DT", "DescTools", "datamods", "exact2x2", "irr", "magrittr", "rintrojs", "rstatix", "shiny", "shinyWidgets", "shinyjs"] }, "vvfiller": { "name": "vvfiller", @@ -123167,13 +124421,13 @@ "name": "vvshiny", "version": "0.1.1", "sha256": "015rac6hz6k5wrg75abiyicjpljfs3cxibrala4dm5jxnwrm79sa", - "depends": ["dplyr", "DT", "forcats", "ggalluvial", "ggplot2", "ggpubr", "htmltools", "htmlwidgets", "magrittr", "plotly", "purrr", "rlang", "scales", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyWidgets", "stringr"] + "depends": ["DT", "dplyr", "forcats", "ggalluvial", "ggplot2", "ggpubr", "htmltools", "htmlwidgets", "magrittr", "plotly", "purrr", "rlang", "scales", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "stringr"] }, "vvtableau": { "name": "vvtableau", "version": "0.6.0", "sha256": "0l5ma8004zw69w55qvdmrl1jzg25bp69szyhqddn2h5qcnbg9r1j", - "depends": ["data_table", "dplyr", "httr", "jsonlite", "magrittr", "purrr", "stringr", "tidyr", "XML", "xml2"] + "depends": ["XML", "data_table", "dplyr", "httr", "jsonlite", "magrittr", "purrr", "stringr", "tidyr", "xml2"] }, "vvtermtime": { "name": "vvtermtime", @@ -123191,7 +124445,7 @@ "name": "wCorr", "version": "1.9.8", "sha256": "0ja51w17q80r7xpwqhzn416b48ji9178026wf5ibm4s0hsfz7vb2", - "depends": ["minqa", "mnormt", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "minqa", "mnormt"] }, "wINEQ": { "name": "wINEQ", @@ -123217,6 +124471,12 @@ "sha256": "0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4", "depends": [] }, + "wTO": { + "name": "wTO", + "version": "2.1", + "sha256": "11400qmpkpk4y9af4c0q7ir32gwrxgyjspkxk0xlid2an7pbrsr3", + "depends": ["HiClimR", "Rfast", "data_table", "igraph", "magrittr", "plyr", "reshape2", "som", "visNetwork"] + }, "wacolors": { "name": "wacolors", "version": "0.3.1", @@ -123227,19 +124487,19 @@ "name": "wactor", "version": "0.0.1", "sha256": "0dc7413jb3yz0nns2lc93w32wv6m4sg17j2ip63gc12vis0nf855", - "depends": ["ggplot2", "Matrix", "R6", "text2vec", "tibble", "tokenizers", "xgboost"] + "depends": ["Matrix", "R6", "ggplot2", "text2vec", "tibble", "tokenizers", "xgboost"] }, "waffle": { "name": "waffle", "version": "1.0.2", "sha256": "17z05mlnp2k9dywr0bbqz633sq1xs8q9879bl2na1in39qxq0l76", - "depends": ["curl", "DT", "extrafont", "ggplot2", "gridExtra", "gtable", "htmlwidgets", "plyr", "RColorBrewer", "rlang", "stringr"] + "depends": ["DT", "RColorBrewer", "curl", "extrafont", "ggplot2", "gridExtra", "gtable", "htmlwidgets", "plyr", "rlang", "stringr"] }, "waiter": { "name": "waiter", "version": "0.2.5", "sha256": "0ya92qr25ssfkzn888b7rr8rn0304f3gz4h4pnc2a95rknbmxhls", - "depends": ["htmltools", "R6", "shiny"] + "depends": ["R6", "htmltools", "shiny"] }, "wakefield": { "name": "wakefield", @@ -123269,7 +124529,7 @@ "name": "walker", "version": "1.0.8", "sha256": "1y8jj3kf8wrkw3rkai0scnakb9cyb8dbvhji3vprs3cyprcrkf4r", - "depends": ["bayesplot", "BH", "coda", "dplyr", "ggplot2", "Hmisc", "KFAS", "loo", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "rlang", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Hmisc", "KFAS", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "StanHeaders", "bayesplot", "coda", "dplyr", "ggplot2", "loo", "rlang", "rstan", "rstantools"] }, "walkscore": { "name": "walkscore", @@ -123285,9 +124545,9 @@ }, "wallace": { "name": "wallace", - "version": "2.1.2", - "sha256": "1clg0h25cxjfcp6d3pscsakcbrcgcsbfazdsim08jw88hz5nxziq", - "depends": ["dplyr", "DT", "ecospat", "ENMeval", "knitcitations", "leafem", "leaflet", "leaflet_extras", "magrittr", "markdown", "RColorBrewer", "rJava", "rlang", "rmarkdown", "sf", "shiny", "shinyalert", "shinyjs", "shinyWidgets", "spocc", "spThin", "zip"] + "version": "2.1.3", + "sha256": "0zij0r5y7ra402w7x52mb9xzk2wdxq898ysyy3w32lwvbjs5lck9", + "depends": ["DT", "ENMeval", "RColorBrewer", "dplyr", "ecospat", "geodata", "knitcitations", "leafem", "leaflet", "leaflet_extras", "magrittr", "markdown", "rJava", "rlang", "rmarkdown", "sf", "shiny", "shinyWidgets", "shinyalert", "shinyjs", "spThin", "spocc", "zip"] }, "wally": { "name": "wally", @@ -123305,7 +124565,7 @@ "name": "walrus", "version": "1.0.5", "sha256": "0z674sg78rdv9rmqr7s4w9rw8diciifwr4bc2v57yfvp0n9gcys4", - "depends": ["ggplot2", "jmvcore", "R6", "WRS2"] + "depends": ["R6", "WRS2", "ggplot2", "jmvcore"] }, "wand": { "name": "wand", @@ -123319,12 +124579,6 @@ "sha256": "0b1g2fpshhkd15b6fz4v3qwf425p5ahbh57acclqq6znl1acl1hg", "depends": ["flextable", "lubridate", "readtext"] }, - "warbleR": { - "name": "warbleR", - "version": "1.1.30", - "sha256": "1fdlivdqawk4g9xb1zc4hdbdd0v44kpdzfb8z75i09zg2nqhgpw1", - "depends": ["bioacoustics", "cli", "dtw", "fftw", "knitr", "monitoR", "NatureSounds", "pbapply", "Rcpp", "RCurl", "rjson", "seewave", "testthat", "tuneR"] - }, "warp": { "name": "warp", "version": "0.2.1", @@ -123335,7 +124589,7 @@ "name": "warpMix", "version": "0.1.0", "sha256": "13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn", - "depends": ["fda", "fields", "lme4", "MASS", "nlme", "reshape2"] + "depends": ["MASS", "fda", "fields", "lme4", "nlme", "reshape2"] }, "washdata": { "name": "washdata", @@ -123353,7 +124607,7 @@ "name": "washex", "version": "1.2.0", "sha256": "0g5cgs6y3l7ng4bcia1w3ysb8z7s3187ph5g052bssd3w01kim6g", - "depends": ["curl", "dplyr", "httr", "purrr", "rlang", "XML", "xml2"] + "depends": ["XML", "curl", "dplyr", "httr", "purrr", "rlang", "xml2"] }, "washi": { "name": "washi", @@ -123443,7 +124697,7 @@ "name": "wavemulcor", "version": "3.1.2", "sha256": "0a9qhcgf0l3zpwq8m476py94wb4rasy6a8xj302y6kwg3gvh1smm", - "depends": ["plot3D", "RColorBrewer", "waveslim"] + "depends": ["RColorBrewer", "plot3D", "waveslim"] }, "waver": { "name": "waver", @@ -123477,9 +124731,9 @@ }, "waywiser": { "name": "waywiser", - "version": "0.5.1", - "sha256": "1ffi4422dph90lwdc72za0sj224mwwddr66awf9yicszj42a6q81", - "depends": ["dplyr", "fields", "FNN", "glue", "hardhat", "Matrix", "purrr", "rlang", "sf", "spdep", "tibble", "tidyselect", "vctrs", "yardstick"] + "version": "0.6.0", + "sha256": "0n6p7p6m5yspmxva7gb3s7drcznxmvx7yb6iccz6h7z8j7yvqv22", + "depends": ["FNN", "Matrix", "dplyr", "fields", "glue", "hardhat", "purrr", "rlang", "sf", "spdep", "tibble", "tidyselect", "vctrs", "yardstick"] }, "wbacon": { "name": "wbacon", @@ -123509,13 +124763,13 @@ "name": "wbsts", "version": "2.1", "sha256": "07h3wqmb9ya878fwdj49r0npks0pnd3jlnzri1cmf27c691hwka4", - "depends": ["mvtnorm", "Rcpp", "wavelets"] + "depends": ["Rcpp", "mvtnorm", "wavelets"] }, "wcde": { "name": "wcde", "version": "0.0.7", "sha256": "1wyq4m6ziv4b8zkzg3gjjnyhj2bg18ikfxz98q9c2nxqdiq4kbir", - "depends": ["countrycode", "dplyr", "forcats", "magrittr", "progress", "purrr", "RCurl", "stringr", "tibble", "tidyr"] + "depends": ["RCurl", "countrycode", "dplyr", "forcats", "magrittr", "progress", "purrr", "stringr", "tibble", "tidyr"] }, "wcep": { "name": "wcep", @@ -123525,8 +124779,8 @@ }, "wconf": { "name": "wconf", - "version": "1.1.0", - "sha256": "0860shxvyzgvbnfr0xrpi5cx0r5n6bcrk6ivhgryn48r0k3yrlp4", + "version": "1.2.0", + "sha256": "01ngm0ragl9fqhnk9l9pxdf23n16mvmy9znfdfd1q70qvj9y8v22", "depends": [] }, "wcox": { @@ -123551,7 +124805,7 @@ "name": "wdnet", "version": "1.2.3", "sha256": "02sz8rdj3wy2lj5zxb3znc4hymahmpxmsi1n3bg30naz7492k9pk", - "depends": ["CVXR", "igraph", "Matrix", "rARPACK", "Rcpp", "RcppArmadillo", "RcppXPtrUtils", "wdm"] + "depends": ["CVXR", "Matrix", "Rcpp", "RcppArmadillo", "RcppXPtrUtils", "igraph", "rARPACK", "wdm"] }, "wdnr_gis": { "name": "wdnr.gis", @@ -123581,7 +124835,13 @@ "name": "wearables", "version": "0.8.1", "sha256": "0fjf43cgna1mg4mgg98kqhhl88yfhrr57rln2z6xm6d6bj73q5zn", - "depends": ["dplyr", "futile_logger", "ggplot2", "kernlab", "lubridate", "magrittr", "padr", "R_utils", "RHRV", "signal", "varian", "waveslim", "xts"] + "depends": ["RHRV", "R_utils", "dplyr", "futile_logger", "ggplot2", "kernlab", "lubridate", "magrittr", "padr", "signal", "varian", "waveslim", "xts"] + }, + "weatherOz": { + "name": "weatherOz", + "version": "1.0.0", + "sha256": "14zr8gvrmkarpsdqmc35c6hxl2xyiz463d2bk0a7vv9qvsrrld2i", + "depends": ["apsimx", "clock", "crayon", "crul", "curl", "data_table", "foreign", "jsonlite", "knitr", "lubridate", "magick", "sf", "stars", "terra", "xml2"] }, "weatherindices": { "name": "weatherindices", @@ -123597,9 +124857,9 @@ }, "webSDM": { "name": "webSDM", - "version": "1.1-4", - "sha256": "1ix1sl5nyki8p5g7fwmrskz0ys8drdbyap5nbrw9kv3kjxd7dz14", - "depends": ["abind", "bayesplot", "brms", "broom_mixed", "dismo", "dplyr", "GGally", "ggplot2", "glmnet", "gridExtra", "igraph", "jtools", "rstanarm", "rstantools"] + "version": "1.1-5", + "sha256": "0dcqq99779isn5456j9zd1pvhrnx7b1gblwmm9v8qkjaf7darbg6", + "depends": ["GGally", "abind", "bayesplot", "brms", "broom_mixed", "dismo", "dplyr", "ggplot2", "glmnet", "gridExtra", "igraph", "jtools", "rstanarm", "rstantools"] }, "webchem": { "name": "webchem", @@ -123617,7 +124877,7 @@ "name": "webdriver", "version": "1.0.6", "sha256": "0k87any9rvv367p2zwy89r3rxszsq3w78pzdq36by4ijn659la2l", - "depends": ["base64enc", "callr", "curl", "debugme", "httr", "jsonlite", "R6", "showimage", "withr"] + "depends": ["R6", "base64enc", "callr", "curl", "debugme", "httr", "jsonlite", "showimage", "withr"] }, "webexercises": { "name": "webexercises", @@ -123645,9 +124905,9 @@ }, "webmockr": { "name": "webmockr", - "version": "0.9.0", - "sha256": "1a590fyzmag1p6c9a82yp93wd1s4jdznk0416i0pv8r5jwarkdv7", - "depends": ["base64enc", "crul", "curl", "fauxpas", "jsonlite", "magrittr", "R6", "urltools"] + "version": "1.0.0", + "sha256": "09j6j5d60cz0sjzg7zacdk3pypip3hnhf2qq24nmvy9aiz0a4lkk", + "depends": ["R6", "base64enc", "crul", "curl", "fauxpas", "jsonlite", "magrittr", "urltools"] }, "webp": { "name": "webp", @@ -123687,9 +124947,9 @@ }, "websocket": { "name": "websocket", - "version": "1.4.1", - "sha256": "1ks9cyj39jnb0rkx2ii3ckmpl373m5f8sz0i4q3gk7kkv3js07r8", - "depends": ["AsioHeaders", "cpp11", "later", "R6"] + "version": "1.4.2", + "sha256": "040kawypkkim5scjp86immcqn42jj8s591hvypx1anyf7d8nls4w", + "depends": ["AsioHeaders", "R6", "cpp11", "later"] }, "webtrackR": { "name": "webtrackR", @@ -123723,9 +124983,9 @@ }, "wehoop": { "name": "wehoop", - "version": "2.0.0", - "sha256": "031z2lr1sjnmb8awcd3r8ygj20c0p57sjhim9p7ifv5vkv0044g9", - "depends": ["cli", "data_table", "dplyr", "glue", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "Rcpp", "RcppParallel", "rlang", "rvest", "stringr", "tidyr", "usethis"] + "version": "2.1.0", + "sha256": "0lg5k4w7k9pcp8dv4ayzlnd3xc39z5p6wabqnnhicy0byhjny838", + "depends": ["Rcpp", "RcppParallel", "cli", "data_table", "dplyr", "glue", "janitor", "jsonlite", "lubridate", "magrittr", "progressr", "purrr", "rlang", "rvest", "stringr", "tidyr", "usethis"] }, "weibullness": { "name": "weibullness", @@ -123737,7 +124997,7 @@ "name": "weibulltools", "version": "2.1.0", "sha256": "1scdpxvc9sj4jfxnf8xcsnpnp2vn0kl25gn1m2yqa3dw97h64mcl", - "depends": ["dplyr", "ggplot2", "lifecycle", "magrittr", "plotly", "purrr", "Rcpp", "RcppArmadillo", "sandwich", "segmented", "tibble"] + "depends": ["Rcpp", "RcppArmadillo", "dplyr", "ggplot2", "lifecycle", "magrittr", "plotly", "purrr", "sandwich", "segmented", "tibble"] }, "weightQuant": { "name": "weightQuant", @@ -123759,9 +125019,9 @@ }, "weightedRank": { "name": "weightedRank", - "version": "0.2.5", - "sha256": "0sz2d482cjp0z2wxlqjq745xz3ap6h7v03l19q4y99p86909i0v4", - "depends": ["mvtnorm", "sensitivitymv"] + "version": "0.3.7", + "sha256": "149xvsl20grf8wicx3xxyp9qpi7dga7ghklmrqam0y5rrkqp8y4j", + "depends": ["mvtnorm", "sensitivitymv", "senstrat"] }, "weightedScores": { "name": "weightedScores", @@ -123779,7 +125039,7 @@ "name": "weights", "version": "1.0.4", "sha256": "1fnchf7f0hyl514bk8sc3l884kg25kb5xm4mc2l28n6hm7l6bgpg", - "depends": ["gdata", "Hmisc", "lme4", "mice"] + "depends": ["Hmisc", "gdata", "lme4", "mice"] }, "weird": { "name": "weird", @@ -123803,7 +125063,7 @@ "name": "welo", "version": "0.1.4", "sha256": "14561rxbcc0w326nk24zl52nfw262z1pwvxsjfg9yx300byjljx3", - "depends": ["boot", "ggplot2", "Rdpack", "reshape2", "rio", "xts"] + "depends": ["Rdpack", "boot", "ggplot2", "reshape2", "rio", "xts"] }, "wesanderson": { "name": "wesanderson", @@ -123819,15 +125079,15 @@ }, "weyl": { "name": "weyl", - "version": "0.0-4", - "sha256": "1i6kzadw37l2bj8n6z2c9j7h7jk2gjhx7lizwlgpjn8sycm2rkqr", - "depends": ["disordR", "freealg", "mathjaxr", "spray"] + "version": "0.0-5", + "sha256": "18gapsjvv3xj161kk8y8cwq4c3zxc8gjamkmzxm68vfgixf8bkh8", + "depends": ["disordR", "freealg", "spray"] }, "wfe": { "name": "wfe", "version": "1.9.1", "sha256": "0lcg7hzdll1wqdwydkk96m4n715h8sjn3qwhabm245m0hqhdf7is", - "depends": ["arm", "MASS", "Matrix"] + "depends": ["MASS", "Matrix", "arm"] }, "wfg": { "name": "wfg", @@ -123869,7 +125129,7 @@ "name": "wheatmap", "version": "0.2.0", "sha256": "064idlrnb85xxav39gp3n854fic6514khvazrf5d0x48crpzyvdp", - "depends": ["colorspace", "RColorBrewer"] + "depends": ["RColorBrewer", "colorspace"] }, "when": { "name": "when", @@ -123935,7 +125195,7 @@ "name": "whoa", "version": "0.0.2", "sha256": "1wa1s2dqwkmfa3avrgqkm6w59b6vm2xnnb77q25w187wdpjq65xx", - "depends": ["dplyr", "ggplot2", "magrittr", "Rcpp", "tibble", "tidyr", "vcfR", "viridis"] + "depends": ["Rcpp", "dplyr", "ggplot2", "magrittr", "tibble", "tidyr", "vcfR", "viridis"] }, "whoami": { "name": "whoami", @@ -123947,7 +125207,7 @@ "name": "whomds", "version": "1.1.1", "sha256": "1n7i7hh18mplqrhz554pwx4n70p1k7ryfzcgpxigzqphdny44npp", - "depends": ["colorspace", "dplyr", "eRm", "ggplot2", "ggraph", "GPArotation", "igraph", "nFactors", "plyr", "polycor", "psych", "purrr", "RColorBrewer", "readr", "rlang", "scales", "srvyr", "stringr", "TAM", "tibble", "tidygraph", "tidyr", "WrightMap"] + "depends": ["GPArotation", "RColorBrewer", "TAM", "WrightMap", "colorspace", "dplyr", "eRm", "ggplot2", "ggraph", "igraph", "nFactors", "plyr", "polycor", "psych", "purrr", "readr", "rlang", "scales", "srvyr", "stringr", "tibble", "tidygraph", "tidyr"] }, "widals": { "name": "widals", @@ -123965,12 +125225,12 @@ "name": "widyr", "version": "0.1.5", "sha256": "05300hslrfpsqaxzzbmxgl2s2dz3wldpmnxh9hzgy97xkdc0c6fn", - "depends": ["broom", "dplyr", "Matrix", "purrr", "reshape2", "rlang", "tibble", "tidyr", "tidytext"] + "depends": ["Matrix", "broom", "dplyr", "purrr", "reshape2", "rlang", "tibble", "tidyr", "tidytext"] }, "wiesbaden": { "name": "wiesbaden", - "version": "1.2.9", - "sha256": "0sf61xrkzlk1pbjv1ha019nav20a5w1svx5jnsyck5050xxs2y06", + "version": "1.2.10", + "sha256": "0kmapfksrxkr3dry8didznhv3q0827183532s78bai9l2hm8is1p", "depends": ["httr", "jsonlite", "keyring", "readr", "stringi", "stringr", "xml2"] }, "wig": { @@ -123981,9 +125241,9 @@ }, "wikiTools": { "name": "wikiTools", - "version": "1.2.4", - "sha256": "1s6rssxalg3p4xfh1dc2igiqpiwyd8h5dlyfs5vwixn7pjyd3ac5", - "depends": ["httr", "jsonlite", "ratelimitr"] + "version": "1.2.7", + "sha256": "0yw1afj926pki61kfgmb5s4whaj25c93hqs4yja8gqb87pky5010", + "depends": ["collections", "curl", "httr", "jsonlite", "ratelimitr"] }, "wikibooks": { "name": "wikibooks", @@ -124001,25 +125261,19 @@ "name": "wikilake", "version": "0.7.0", "sha256": "0niym9azy4qzcr4rriw0bfd97scx1mdpx67szinj7qsh569xb61m", - "depends": ["dplyr", "maps", "rvest", "selectr", "sp", "stringi", "stringr", "tidyr", "units", "WikipediR", "xml2"] - }, - "wikiprofiler": { - "name": "wikiprofiler", - "version": "0.1.3", - "sha256": "1az2phwgy8aqbl9sxvsq1madrdlrw7zshq9fhw5q580xx0lfhkmk", - "depends": ["ggplot2", "ggplotify", "gson", "rsvg", "yulab_utils"] + "depends": ["WikipediR", "dplyr", "maps", "rvest", "selectr", "sp", "stringi", "stringr", "tidyr", "units", "xml2"] }, "wikitaxa": { "name": "wikitaxa", "version": "0.4.0", "sha256": "1z7p7dwgl8x4ambwss5dqlp4zgz52mgj0vhx2bqwizarmx9ji1xs", - "depends": ["crul", "curl", "data_table", "jsonlite", "tibble", "WikidataR", "xml2"] + "depends": ["WikidataR", "crul", "curl", "data_table", "jsonlite", "tibble", "xml2"] }, "wikkitidy": { "name": "wikkitidy", - "version": "0.1.12", - "sha256": "11i9spgl9zicy980a9r93277b7y6zqixnn8cks8yfh0phvazfgvj", - "depends": ["cli", "dplyr", "glue", "httr2", "lubridate", "magrittr", "openssl", "pillar", "purrr", "rlang", "stringr", "tibble", "vctrs"] + "version": "0.1.13", + "sha256": "03gdzmmic45z82a4c6cvdmispjl2r8iwkmmdzxm2b7ag4f7araak", + "depends": ["cli", "dplyr", "glue", "httr2", "lubridate", "magrittr", "openssl", "pillar", "purrr", "rlang", "stringr", "tibble", "vctrs", "webfakes"] }, "wilcoxmed": { "name": "wilcoxmed", @@ -124055,7 +125309,7 @@ "name": "wilson", "version": "2.4.2", "sha256": "050hi6rigs024is1ry0yymqapgqfhzpp0ghk5ya028k71k22lksx", - "depends": ["circlize", "colourpicker", "ComplexHeatmap", "data_table", "DESeq2", "DT", "factoextra", "FactoMineR", "ggplot2", "ggrepel", "gplots", "heatmaply", "log4r", "openssl", "plotly", "plyr", "R6", "RColorBrewer", "reshape", "rintrojs", "rje", "rjson", "RJSONIO", "scales", "shiny", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "viridis", "zip"] + "depends": ["ComplexHeatmap", "DESeq2", "DT", "FactoMineR", "R6", "RColorBrewer", "RJSONIO", "circlize", "colourpicker", "data_table", "factoextra", "ggplot2", "ggrepel", "gplots", "heatmaply", "log4r", "openssl", "plotly", "plyr", "reshape", "rintrojs", "rje", "rjson", "scales", "shiny", "shinyWidgets", "shinycssloaders", "shinydashboard", "shinyjs", "viridis", "zip"] }, "winch": { "name": "winch", @@ -124089,8 +125343,8 @@ }, "winfapReader": { "name": "winfapReader", - "version": "0.1-5", - "sha256": "01hc0kcm7qfzk47rci6lfmrqs4zfj8z7abqydgi2ckq8n1k2pd0h", + "version": "0.1-5.1", + "sha256": "08b3311vw6cf9y9spzvd7pl7q53ik5alkxq4j5d6w8a4kd7bbwaf", "depends": ["lubridate"] }, "wingen": { @@ -124103,13 +125357,13 @@ "name": "winputall", "version": "1.0.1", "sha256": "17jwnnzy5a38a2n9ixhs8vk8ybq2a8lhjv5hfx4dwdg73iklnmib", - "depends": ["BH", "dplyr", "future", "future_apply", "ks", "LearnBayes", "MASS", "Matrix", "matrixcalc", "matrixStats", "plm", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "LearnBayes", "MASS", "Matrix", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "dplyr", "future", "future_apply", "ks", "matrixStats", "matrixcalc", "plm", "rstan", "rstantools"] }, "wiqid": { "name": "wiqid", "version": "0.3.3", "sha256": "1d5bckkr6cnixccxaa14n7vbsya5cc00y9mryy1j69shhsmxp5ks", - "depends": ["coda", "HDInterval", "MASS", "mcmcOutput", "plotrix", "truncnorm"] + "depends": ["HDInterval", "MASS", "coda", "mcmcOutput", "plotrix", "truncnorm"] }, "withdots": { "name": "withdots", @@ -124119,14 +125373,14 @@ }, "withr": { "name": "withr", - "version": "3.0.0", - "sha256": "1rz0pgm1bg3cnc09s8q8yyg83lmf8bv9arlasciqqr0fdpgfwy4c", + "version": "3.0.1", + "sha256": "0h9qbaa4i63awk176i3pm7bia7wgssav9zk9jvc7sg3k5yng2wym", "depends": [] }, "wk": { "name": "wk", - "version": "0.9.1", - "sha256": "0yxzyb09by9winspdn0585xhjmdcablb07wx6pf7ahg0q18sz85p", + "version": "0.9.2", + "sha256": "1y75hdg1p1h6pja3zxpllmbvzqlh67n5z9d3d6zhknxfkgfmwrrk", "depends": [] }, "wkb": { @@ -124153,11 +125407,17 @@ "sha256": "0qy4cp4d8nlcqlcs4mqjv1f1kf1yh9y2wvh1ak6f049qlj7yfwfb", "depends": [] }, + "wmwm": { + "name": "wmwm", + "version": "1.0.0", + "sha256": "0dhh36wzcjg4c3yrg2qgb6kj7p8fpadvfwiach04dlqmbzjj2knw", + "depends": [] + }, "wmwpow": { "name": "wmwpow", "version": "0.1.3", "sha256": "03rd75r4wih1w7srhnwqxjkirisb43y1sd2f1wzixqj8lq0dmb25", - "depends": ["lamW", "MASS", "smoothmest"] + "depends": ["MASS", "lamW", "smoothmest"] }, "wnl": { "name": "wnl", @@ -124193,12 +125453,12 @@ "name": "womblR", "version": "1.0.5", "sha256": "0acvv7jylissacvln51pi14a8i9y02q5whrz3sx5dsnvsk00slzm", - "depends": ["msm", "mvtnorm", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "msm", "mvtnorm"] }, "woodValuationDE": { "name": "woodValuationDE", - "version": "1.0.1", - "sha256": "1sbyl4yd766lhjqghm4hq9162wz0qabiwiwnsiwzdn4fbfihxl7v", + "version": "1.0.2", + "sha256": "0lm6br7nnycng2lidkgg41li58q3pgsh85hi6b1mj2r6vkbnk3rx", "depends": ["dplyr"] }, "wooldridge": { @@ -124249,6 +125509,12 @@ "sha256": "0pvnijh2gvwjbd86ivky0zbi8y1x40xazsv2bdy5s2rfsscf4l88", "depends": ["crayon"] }, + "wordmap": { + "name": "wordmap", + "version": "0.8.0", + "sha256": "04s77aghy7q2x9khhl49xv2kbkhim39pmrr9ra3wrlm7map47ygr", + "depends": ["Matrix", "quanteda", "stringi"] + }, "wordnet": { "name": "wordnet", "version": "0.1-17", @@ -124271,7 +125537,7 @@ "name": "wordpredictor", "version": "0.0.3", "sha256": "0079nkjimzz07yzqx8ksgk7isi0b5j1nxmisicbc8qvsamirm68v", - "depends": ["digest", "dplyr", "ggplot2", "patchwork", "SnowballC", "stringr"] + "depends": ["SnowballC", "digest", "dplyr", "ggplot2", "patchwork", "stringr"] }, "words": { "name": "words", @@ -124289,7 +125555,7 @@ "name": "wordspace", "version": "0.2-8", "sha256": "17fqd4zrsklv2ik3lg00x66yasfh1kyhs3k9ri6lrk56wwv6hzb2", - "depends": ["cluster", "iotools", "MASS", "Matrix", "Rcpp", "sparsesvd"] + "depends": ["MASS", "Matrix", "Rcpp", "cluster", "iotools", "sparsesvd"] }, "workflowr": { "name": "workflowr", @@ -124315,6 +125581,12 @@ "sha256": "1gynlvmqxyibql5j3db9dwvc0jsc9jqzpy3d3gp43d5lcl11mcmq", "depends": ["pracma", "signal"] }, + "worldbank": { + "name": "worldbank", + "version": "0.2.0", + "sha256": "0bl8c5cqz5s8yl06qy7xg92nhgald7xil4ck7vb4h6rln210bz9v", + "depends": ["httr2"] + }, "worldfootballR": { "name": "worldfootballR", "version": "0.6.2", @@ -124355,7 +125627,7 @@ "name": "wpa", "version": "1.9.1", "sha256": "0likivdwxl66nj6wxkcssqgz8slhagbw9qhxbxwsw10gyq4769rb", - "depends": ["data_table", "dplyr", "DT", "ggplot2", "ggraph", "ggrepel", "ggwordcloud", "htmltools", "igraph", "magrittr", "markdown", "networkD3", "proxy", "purrr", "reshape2", "rmarkdown", "scales", "tidyr", "tidyselect", "tidytext"] + "depends": ["DT", "data_table", "dplyr", "ggplot2", "ggraph", "ggrepel", "ggwordcloud", "htmltools", "igraph", "magrittr", "markdown", "networkD3", "proxy", "purrr", "reshape2", "rmarkdown", "scales", "tidyr", "tidyselect", "tidytext"] }, "wpp2008": { "name": "wpp2008", @@ -124397,7 +125669,7 @@ "name": "wppExplorer", "version": "2.3-4", "sha256": "1pbmjg6y543aih8mxf9njfwpm090virhgqf8w0a5yx0jdfjwmz04", - "depends": ["DT", "ggplot2", "googleVis", "Hmisc", "plyr", "reshape2", "shiny", "shinyjs", "shinythemes", "wpp2019"] + "depends": ["DT", "Hmisc", "ggplot2", "googleVis", "plyr", "reshape2", "shiny", "shinyjs", "shinythemes", "wpp2019"] }, "wql": { "name": "wql", @@ -124409,13 +125681,13 @@ "name": "wqs", "version": "0.0.1", "sha256": "14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg", - "depends": ["glm2", "Rsolnp"] + "depends": ["Rsolnp", "glm2"] }, "wqspt": { "name": "wqspt", "version": "1.0.1", "sha256": "1xd588kw171djx7q21b2jjarhbzd4i0gx7ccv1j1wyl95yzq07ba", - "depends": ["cowplot", "extraDistr", "ggplot2", "gWQS", "mvtnorm", "pbapply", "rlang", "viridis"] + "depends": ["cowplot", "extraDistr", "gWQS", "ggplot2", "mvtnorm", "pbapply", "rlang", "viridis"] }, "wqtrends": { "name": "wqtrends", @@ -124427,18 +125699,18 @@ "name": "wrGraph", "version": "1.3.7", "sha256": "127s4i73ww817q9k7x463633rlk8fj0kjvpwqwcaxswdc7a3ks7b", - "depends": ["lattice", "RColorBrewer", "wrMisc"] + "depends": ["RColorBrewer", "lattice", "wrMisc"] }, "wrMisc": { "name": "wrMisc", - "version": "1.15.0.3", - "sha256": "0680lxkwyxyy0ks3cyp41gxkv7vjf235mwml5ixk07rkin195w9c", + "version": "1.15.1", + "sha256": "1ii3dl2dpxrshhh8dfvn75s7rn99ylvldb46cc3pdadjb8czzgmn", "depends": ["MASS"] }, "wrProteo": { "name": "wrProteo", - "version": "1.11.0.1", - "sha256": "0v9a62r4881aax5h5mnzgjzk2mgkrfa14lvy2w8i9mhcz5q6dg7k", + "version": "1.12.0", + "sha256": "1ghkh0j4sh7bv6zz73bdbdyjqhyc1q53flzzpq0khr98hl4rn6dv", "depends": ["knitr", "limma", "wrMisc"] }, "wrTopDownFrag": { @@ -124457,7 +125729,7 @@ "name": "wrappedtools", "version": "0.9.5", "sha256": "1rpbfsh8cs07icc8440rmcmgwzjwrax86hk7hx7zwmsjigap3pxi", - "depends": ["boot", "broom", "coin", "DescTools", "dplyr", "flextable", "forcats", "ggplot2", "glue", "kableExtra", "knitr", "lifecycle", "purrr", "rlang", "rlist", "stringr", "tibble", "tidyr"] + "depends": ["DescTools", "boot", "broom", "coin", "dplyr", "flextable", "forcats", "ggplot2", "glue", "kableExtra", "knitr", "lifecycle", "purrr", "rlang", "rlist", "stringr", "tibble", "tidyr"] }, "wrappr": { "name": "wrappr", @@ -124493,13 +125765,13 @@ "name": "wrswoR", "version": "1.1.1", "sha256": "1q0nc08q8f3kl9yvcivzylykk1ar5j5dw3ian2y9nrzgzri5l10i", - "depends": ["logging", "Rcpp"] + "depends": ["Rcpp", "logging"] }, "wru": { "name": "wru", "version": "3.0.3", "sha256": "1d8k9bmzwg11ypkhhcnj2l6i2qnk13a09la0nc713nlwc21zqc44", - "depends": ["cli", "dplyr", "furrr", "future", "piggyback", "PL94171", "purrr", "Rcpp", "RcppArmadillo", "rlang", "tidyr"] + "depends": ["PL94171", "Rcpp", "RcppArmadillo", "cli", "dplyr", "furrr", "future", "piggyback", "purrr", "rlang", "tidyr"] }, "wsbackfit": { "name": "wsbackfit", @@ -124535,7 +125807,7 @@ "name": "wsyn", "version": "1.0.4", "sha256": "0wq07n69l52rs0ddl1r3ml5jh5nflsg9mddvc3dxjdpd00mgbxnl", - "depends": ["fields", "MASS"] + "depends": ["MASS", "fields"] }, "wtest": { "name": "wtest", @@ -124547,18 +125819,18 @@ "name": "wv", "version": "0.1.2", "sha256": "0dx33bs05k6zi6rnk12v6z2l2pvvx2jdl99vafbpyydf0ls4ppbk", - "depends": ["coda", "Rcpp", "RcppArmadillo", "simts"] + "depends": ["Rcpp", "RcppArmadillo", "coda", "simts"] }, "wwntests": { "name": "wwntests", "version": "1.1.0", "sha256": "0bs0i66ydy5zg66nwhniqzd000rc5qcmkliqpb3f9n749x2sj2f6", - "depends": ["fda", "ftsa", "MASS", "rainbow", "sde"] + "depends": ["MASS", "fda", "ftsa", "rainbow", "sde"] }, "wxgenR": { "name": "wxgenR", - "version": "1.4.0", - "sha256": "00i89r7299psykl1pgaxp3hmkx7na0g9m0yh4gp68cnp6xla7wxh", + "version": "1.4.1", + "sha256": "057wvdkanzwc900fcfn26bs29sq4xsbvmp4xm6bvh21iy2ijj96d", "depends": ["doParallel", "dplyr", "foreach", "lubridate", "magrittr", "msm", "plyr", "sm"] }, "wyz_code_metaTesting": { @@ -124571,19 +125843,19 @@ "name": "wyz.code.offensiveProgramming", "version": "1.1.24", "sha256": "1q3yn5yp2qlzqg1xpxlkpdkiij4kzwn9yj8mc9xxx4bxnbspkakq", - "depends": ["crayon", "data_table", "R6", "stringr", "tidyr"] + "depends": ["R6", "crayon", "data_table", "stringr", "tidyr"] }, "wyz_code_rdoc": { "name": "wyz.code.rdoc", "version": "1.1.19", "sha256": "02k6wk45dn6i8kzxhgcxqxvrzxf063dny17jjnj83wsxx2b37jgv", - "depends": ["crayon", "data_table", "digest", "R6", "stringr", "tidyr", "wyz_code_offensiveProgramming"] + "depends": ["R6", "crayon", "data_table", "digest", "stringr", "tidyr", "wyz_code_offensiveProgramming"] }, "wyz_code_testthat": { "name": "wyz.code.testthat", "version": "1.1.20", "sha256": "1h3mf898wrqx212xxaqqm6vqgg1aicrykrnc32f9wl5hyjcbnq70", - "depends": ["data_table", "R6", "tidyr", "wyz_code_offensiveProgramming"] + "depends": ["R6", "data_table", "tidyr", "wyz_code_offensiveProgramming"] }, "x_ent": { "name": "x.ent", @@ -124599,21 +125871,21 @@ }, "x13binary": { "name": "x13binary", - "version": "1.1.60", - "sha256": "1hc5knakha9pwlm9irrrjav012a53x97jv2wpw4lwhfnp6lwy118", + "version": "1.1.61", + "sha256": "0v7cwgq3xkz4k9l2drxa4bjgam1drs43chfwvs8hbcl1ybrxi2h4", "depends": [] }, "x3ptools": { "name": "x3ptools", "version": "0.0.4", "sha256": "1gl7bpbkww98c8khcyjbydsfg55fa08wcsxf5f0jk1i49ap2q1ii", - "depends": ["assertthat", "digest", "dplyr", "imager", "magrittr", "MASS", "png", "pracma", "purrr", "readr", "rgl", "scales", "tidyr", "xml2", "yaml", "zoo"] + "depends": ["MASS", "assertthat", "digest", "dplyr", "imager", "magrittr", "png", "pracma", "purrr", "readr", "rgl", "scales", "tidyr", "xml2", "yaml", "zoo"] }, "xLLiM": { "name": "xLLiM", "version": "2.3", "sha256": "08v6acn6vpn8asn61ldqdryjz0xk5zyd2v63aqrc5xximpqwrp7d", - "depends": ["abind", "capushe", "corpcor", "e1071", "glmnet", "igraph", "MASS", "Matrix", "mda", "mixOmics", "progress", "randomForest"] + "depends": ["MASS", "Matrix", "abind", "capushe", "corpcor", "e1071", "glmnet", "igraph", "mda", "mixOmics", "progress", "randomForest"] }, "xRing": { "name": "xRing", @@ -124625,13 +125897,13 @@ "name": "xSub", "version": "3.0.2", "sha256": "07mib63zbvffr4w8klpv017d13wvqy3mwrpssr0vydcj8475gjfx", - "depends": ["countrycode", "haven", "RCurl"] + "depends": ["RCurl", "countrycode", "haven"] }, "xVA": { "name": "xVA", "version": "1.1", "sha256": "06y9qhly14y5r8d1g85jdzz8x5lwzfjkiy5zak6146mknl4nzz11", - "depends": ["data_table", "SACCR", "Trading"] + "depends": ["SACCR", "Trading", "data_table"] }, "xadmix": { "name": "xadmix", @@ -124661,7 +125933,7 @@ "name": "xdcclarge", "version": "0.1.0", "sha256": "1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn", - "depends": ["nlshrink", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "nlshrink"] }, "xefun": { "name": "xefun", @@ -124739,12 +126011,12 @@ "name": "xesreadR", "version": "0.2.3", "sha256": "1pvdx0mxg2f885bhy4hb3kqzcgva4q7hzzaipkfzyi5lnjdsbc81", - "depends": ["bupaR", "data_table", "dplyr", "lubridate", "purrr", "stringr", "tidyr", "XML", "xml2"] + "depends": ["XML", "bupaR", "data_table", "dplyr", "lubridate", "purrr", "stringr", "tidyr", "xml2"] }, "xfun": { "name": "xfun", - "version": "0.45", - "sha256": "049nk6h9xbdn2i6m07s26rqn790adww2y6mya03v95yj5xfg05iq", + "version": "0.47", + "sha256": "0jrc4g799nhyra8n202107mx7h42yzz4n4yblf3fdwjdpzyp964r", "depends": [] }, "xgb2sql": { @@ -124755,9 +126027,9 @@ }, "xgboost": { "name": "xgboost", - "version": "1.7.7.1", - "sha256": "08wpxr8jkzsqb5zaw43bmq5r7k3jnb1ibjkliwh2ffjq7b7jr4gp", - "depends": ["data_table", "jsonlite", "Matrix"] + "version": "1.7.8.1", + "sha256": "1s8vpj0rwyvzq6q4bby0szxwsj34z26mkrm7qx4pbs9g1g86yk9r", + "depends": ["Matrix", "data_table", "jsonlite"] }, "xgrove": { "name": "xgrove", @@ -124769,19 +126041,19 @@ "name": "xgxr", "version": "1.1.2", "sha256": "0mmnh6zab7qllbfpl3vn5sd7hcznm83v5rxi1pw5zv96ax0ikagv", - "depends": ["assertthat", "binom", "Deriv", "DescTools", "dplyr", "ggplot2", "glue", "gtable", "Hmisc", "labeling", "magrittr", "minpack_lm", "pander", "png", "RCurl", "readr", "scales", "stringr", "tibble"] + "depends": ["Deriv", "DescTools", "Hmisc", "RCurl", "assertthat", "binom", "dplyr", "ggplot2", "glue", "gtable", "labeling", "magrittr", "minpack_lm", "pander", "png", "readr", "scales", "stringr", "tibble"] }, "xhaz": { "name": "xhaz", - "version": "2.0.1", - "sha256": "1kipqscniyb4s7p29pdkg8hg95wb78jpnax8qh058vzrk5vqz181", - "depends": ["gtools", "numDeriv", "optimParallel", "statmod", "stringr", "survexp_fr", "survival"] + "version": "2.0.2", + "sha256": "0d91afvjrwgwf5h1p2z6q15psf3n9hvshb75jyxvyxnhq8c5darw", + "depends": ["gtools", "mexhaz", "numDeriv", "optimParallel", "statmod", "stringr", "survexp_fr", "survival"] }, "xkcd": { "name": "xkcd", "version": "0.0.6", "sha256": "1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f", - "depends": ["extrafont", "ggplot2", "Hmisc"] + "depends": ["Hmisc", "extrafont", "ggplot2"] }, "xkcdcolors": { "name": "xkcdcolors", @@ -124829,7 +126101,7 @@ "name": "xmeta", "version": "1.3.2", "sha256": "1by3w7mn3kk4942pbjyqb6hbrsxbxywfjy96cq0cmvwzq7aamhxm", - "depends": ["aod", "glmmML", "MASS", "metafor", "mvmeta", "numDeriv", "plotrix"] + "depends": ["MASS", "aod", "glmmML", "metafor", "mvmeta", "numDeriv", "plotrix"] }, "xml2": { "name": "xml2", @@ -124871,7 +126143,7 @@ "name": "xmpdf", "version": "0.2.1", "sha256": "0pma8njk77ggpky6m4l9p7n7ardy41lsn0q67wkgr0mwgjjyil7w", - "depends": ["brio", "datetimeoffset", "jsonlite", "purrr", "R6", "rlang", "stringi"] + "depends": ["R6", "brio", "datetimeoffset", "jsonlite", "purrr", "rlang", "stringi"] }, "xmrr": { "name": "xmrr", @@ -124907,7 +126179,7 @@ "name": "xplain", "version": "0.2.2", "sha256": "152a83ckmhns6yniy87mmjva5bkv5x3phv63l1kkcmrr9bclfgz0", - "depends": ["httr", "RCurl", "readr", "XML"] + "depends": ["RCurl", "XML", "httr", "readr"] }, "xplorerr": { "name": "xplorerr", @@ -124937,7 +126209,7 @@ "name": "xpose4", "version": "4.7.3", "sha256": "0w670g9y8nsdjcdxnvwpx8j9yfr7xhb5x3a171z1xizdfgpcpjxz", - "depends": ["dplyr", "gam", "Hmisc", "lattice", "lazyeval", "readr", "survival", "tibble"] + "depends": ["Hmisc", "dplyr", "gam", "lattice", "lazyeval", "readr", "survival", "tibble"] }, "xray": { "name": "xray", @@ -124949,13 +126221,13 @@ "name": "xrf", "version": "0.2.2", "sha256": "0917chdkl6b20fdbwwj5b6wyihn9p444anwjspd0zqxmp8ag0i5f", - "depends": ["dplyr", "fuzzyjoin", "glmnet", "Matrix", "rlang", "xgboost"] + "depends": ["Matrix", "dplyr", "fuzzyjoin", "glmnet", "rlang", "xgboost"] }, "xrnet": { "name": "xrnet", - "version": "0.1.7", - "sha256": "136aadrvsdg9hizjg4q12h56ih0s3w88j3jpfb54ajgdmqw3pldi", - "depends": ["BH", "bigmemory", "foreach", "Rcpp", "RcppEigen"] + "version": "1.0.0", + "sha256": "04zcpxzam4avsc8qxvd5ssjxzg07xf2wjx90y6df4df2dpm7sr6i", + "depends": ["BH", "Rcpp", "RcppEigen", "bigmemory", "foreach"] }, "xslt": { "name": "xslt", @@ -125019,9 +126291,9 @@ }, "xxdi": { "name": "xxdi", - "version": "1.0.0", - "sha256": "1xvx9z24xrqfhpgzfdvscscg3lcjsy6abrw60amcww36sl41fas2", - "depends": ["agop", "ggplot2", "Matrix", "tidyr"] + "version": "1.2.3", + "sha256": "07yjq9f6dw1xvd5map5aj42qhbgdqyla270vqn0h8x2h8wfqjfgq", + "depends": ["Matrix", "agop", "dplyr", "ggplot2", "tidyr"] }, "xxhashlite": { "name": "xxhashlite", @@ -125051,18 +126323,18 @@ "name": "yager", "version": "0.1.1", "sha256": "178ypdr3f0w9rb4ci8q2hshr62b7993m8q6zxc4pf0msq175n1ml", - "depends": ["lhs", "MLmetrics", "randtoolbox"] + "depends": ["MLmetrics", "lhs", "randtoolbox"] }, "yahoofinancer": { "name": "yahoofinancer", "version": "0.3.0", "sha256": "197pidwi69hqrw6qpjg5d2y5mqp2rma4p8wsr2h51957qqql4z5d", - "depends": ["curl", "httr", "jsonlite", "lubridate", "magrittr", "purrr", "R6", "stringr"] + "depends": ["R6", "curl", "httr", "jsonlite", "lubridate", "magrittr", "purrr", "stringr"] }, "yaml": { "name": "yaml", - "version": "2.3.8", - "sha256": "1n1zlbnq3ldipnnm08whpvm8r21vxg4c9jzg7x7j3blw2pi7kl4y", + "version": "2.3.10", + "sha256": "0v9al1fh82vpjhml91j73sim7gfyc0154kxaam41sdkf6qnx8dp2", "depends": [] }, "yamlet": { @@ -125083,12 +126355,6 @@ "sha256": "1l6s06sj9hpb20xndnmm8xim9c9h444w6g98b56i5whb11x37d18", "depends": ["cli", "dplyr", "generics", "hardhat", "lifecycle", "rlang", "tibble", "tidyselect", "vctrs", "withr"] }, - "yarr": { - "name": "yarr", - "version": "0.1.2", - "sha256": "16q109jrydckz7s1rkmr2sh8q92cgr1c534fvpbh3h0bc3fvvf8g", - "depends": [] - }, "yarrr": { "name": "yarrr", "version": "0.1.5", @@ -125111,12 +126377,12 @@ "name": "ycevo", "version": "0.2.1", "sha256": "0gih1dq62k7163pjsjl32smdqy54wjhsp31mv7ddhp4xmr6qb7cw", - "depends": ["dplyr", "future_apply", "generics", "ggplot2", "lubridate", "Matrix", "progressr", "Rcpp", "RcppArmadillo", "rlang", "tibble", "tidyr", "tidyselect"] + "depends": ["Matrix", "Rcpp", "RcppArmadillo", "dplyr", "future_apply", "generics", "ggplot2", "lubridate", "progressr", "rlang", "tibble", "tidyr", "tidyselect"] }, "yesno": { "name": "yesno", - "version": "0.1.2", - "sha256": "1n9v8m1wkk9p2ahl7d1khbffxmshv68q1v44v04y4v1k6qjvm0i2", + "version": "0.1.3", + "sha256": "06qxjacvx17b0mry2qk5ksh814gyz88av80cpgz3d9fx01x3sxlv", "depends": [] }, "yfR": { @@ -125145,8 +126411,8 @@ }, "ymd": { "name": "ymd", - "version": "0.1.0", - "sha256": "18ivf09r7df4jq60pm0gdagcvpb4pz9a19y7dfb096h1yk7rqfa4", + "version": "0.1.1", + "sha256": "03lsq0prm4pzqmaiap5yddnpfl544ippp8vmdrvnc3d8n9fi6fg2", "depends": [] }, "ymlthis": { @@ -125189,13 +126455,13 @@ "name": "ypssc", "version": "1.1.0", "sha256": "0fpph19amj1cafcbh5k6s75pi7nahzgfvnsbs9i5644gv43iavbj", - "depends": ["dplyr", "eulerr", "Peptides", "readxl", "spelling", "stringr", "svDialogs"] + "depends": ["Peptides", "dplyr", "eulerr", "readxl", "spelling", "stringr", "svDialogs"] }, "yuima": { "name": "yuima", "version": "1.15.27", "sha256": "1w0g6yq1g2maq8wslgj5bis1f514ngxkxxbc9j7dsz7w51vppcwd", - "depends": ["boot", "calculus", "coda", "cubature", "expm", "glassoFast", "mvtnorm", "Rcpp", "RcppArmadillo", "statmod", "zoo"] + "depends": ["Rcpp", "RcppArmadillo", "boot", "calculus", "coda", "cubature", "expm", "glassoFast", "mvtnorm", "statmod", "zoo"] }, "yuimaGUI": { "name": "yuimaGUI", @@ -125205,9 +126471,9 @@ }, "yulab_utils": { "name": "yulab.utils", - "version": "0.1.4", - "sha256": "0m1iip6w711z92y6qw0rc0flxl9bzj85vrhm2q2rqjz9pyqf3m1j", - "depends": ["cli", "digest", "fs", "memoise", "rlang"] + "version": "0.1.6", + "sha256": "1v5y6i7s98lcw82rq815nznr9r1jqhpkb3vlqd6xixr52jnyg6sq", + "depends": ["cli", "digest", "fs", "httr2", "rlang"] }, "yum": { "name": "yum", @@ -125223,8 +126489,8 @@ }, "zCompositions": { "name": "zCompositions", - "version": "1.5.0-3", - "sha256": "1gbwx3vgx5viqnn5jsszild6ikyc2pmf1hdjc9475caf9xx9l589", + "version": "1.5.0-4", + "sha256": "1bvaw6m95hz8hd5p8h1d482b45r3w82dyj3sxlijf12s0qg8w63k", "depends": ["MASS", "NADA", "truncnorm"] }, "zTree": { @@ -125249,7 +126515,7 @@ "name": "zcurve", "version": "2.4.2", "sha256": "0a9x0j04mfjn2vfycylvqmsh7v4b1a5lx5j501xbzqp9m3m9bh9q", - "depends": ["evmix", "ggplot2", "nleqslv", "Rcpp", "Rdpack", "rlang"] + "depends": ["Rcpp", "Rdpack", "evmix", "ggplot2", "nleqslv", "rlang"] }, "zdeskR": { "name": "zdeskR", @@ -125267,19 +126533,19 @@ "name": "zebu", "version": "0.2.2.0", "sha256": "1bxzc110nxyssdvnk330qs8qbmf6m7v5gglcfdkxdzy5gcbs1bm6", - "depends": ["data_table", "ggplot2", "Rcpp", "reshape2"] + "depends": ["Rcpp", "data_table", "ggplot2", "reshape2"] }, "zeitgebr": { "name": "zeitgebr", "version": "0.3.5", "sha256": "1h2zx3ah1xdyyag40ragrv7gvpnlzqmappbnjp971dn9khqdxfqs", - "depends": ["behavr", "data_table", "lomb", "pracma", "WaveletComp"] + "depends": ["WaveletComp", "behavr", "data_table", "lomb", "pracma"] }, "zen4R": { "name": "zen4R", "version": "0.10", "sha256": "0sizxy7ck26jrq77y09qcqyzppamfm0kh2zw8s7n83z0bfy54vs6", - "depends": ["atom4R", "cli", "httr", "jsonlite", "keyring", "plyr", "R6", "utf8", "XML", "xml2"] + "depends": ["R6", "XML", "atom4R", "cli", "httr", "jsonlite", "keyring", "plyr", "utf8", "xml2"] }, "zendeskR": { "name": "zendeskR", @@ -125291,19 +126557,19 @@ "name": "zendown", "version": "0.1.0", "sha256": "0xmz4m9c96dm79csxwh878vvjyq147fzcy833i6a5flc5z9asw3z", - "depends": ["checkmate", "cli", "curl", "fs", "glue", "httr2", "RCurl", "tibble", "tidyr"] + "depends": ["RCurl", "checkmate", "cli", "curl", "fs", "glue", "httr2", "tibble", "tidyr"] }, "zenplots": { "name": "zenplots", "version": "1.0.6", "sha256": "0rf690qip2x7w037cbq51cfzqmla398a6x857wpz8cy9fd26ns7p", - "depends": ["graph", "MASS", "PairViz"] + "depends": ["MASS", "PairViz", "graph"] }, "zenstats": { "name": "zenstats", "version": "0.1.2", "sha256": "1ji4pqb0vh8ad8jr4pd6dkjr5cfckrlp24jncjc079wahw64fgs5", - "depends": ["checkmate", "cli", "curl", "polite", "purrr", "RCurl", "readr", "rlang", "rvest", "tibble"] + "depends": ["RCurl", "checkmate", "cli", "curl", "polite", "purrr", "readr", "rlang", "rvest", "tibble"] }, "zeroEQpart": { "name": "zeroEQpart", @@ -125339,7 +126605,7 @@ "name": "zic", "version": "0.9.1", "sha256": "1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp", - "depends": ["coda", "Rcpp", "RcppArmadillo"] + "depends": ["Rcpp", "RcppArmadillo", "coda"] }, "zip": { "name": "zip", @@ -125363,7 +126629,7 @@ "name": "zipcodeR", "version": "0.3.5", "sha256": "1fmjqfhxd0lgsn6l5jvi3qzhbq9865xcps3jm9iy72jx7jxr59lk", - "depends": ["curl", "DBI", "dplyr", "httr", "jsonlite", "raster", "rlang", "RSQLite", "stringr", "tidycensus", "tidyr"] + "depends": ["DBI", "RSQLite", "curl", "dplyr", "httr", "jsonlite", "raster", "rlang", "stringr", "tidycensus", "tidyr"] }, "zipfR": { "name": "zipfR", @@ -125375,7 +126641,13 @@ "name": "zipfextR", "version": "1.0.2", "sha256": "03rlvvw7rfbhsbwd5njmgkkkrxq1lgjdydmpkn6h1hi97pc0gbhh", - "depends": ["copula", "tolerance", "VGAM"] + "depends": ["VGAM", "copula", "tolerance"] + }, + "zippeR": { + "name": "zippeR", + "version": "0.1.0", + "sha256": "0cvgkaisig3h1rqwxxwn22wv8d0p5a8y3m93s7crqx2b8dabw2ql", + "depends": ["dplyr", "httr", "jsonlite", "purrr", "readr", "sf", "spatstat_univar", "stringr", "tibble", "tidycensus", "tidyr", "tigris"] }, "zipsae": { "name": "zipsae", @@ -125411,19 +126683,19 @@ "name": "zoib", "version": "1.6", "sha256": "1px4jjjpn6ikngzlxz1i6fgld9cy5lv6nqn1bjin4q6sqqixyx2j", - "depends": ["abind", "coda", "Formula", "rjags"] + "depends": ["Formula", "abind", "coda", "rjags"] }, "zoid": { "name": "zoid", "version": "1.3.1", "sha256": "1yr958iqk2w0r2cmvh4v2k1d20lrz6l7h9vdmah12krc04nma675", - "depends": ["BH", "gtools", "Rcpp", "RcppEigen", "RcppParallel", "rstan", "rstantools", "StanHeaders"] + "depends": ["BH", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders", "gtools", "rstan", "rstantools"] }, "zoltr": { "name": "zoltr", - "version": "0.5.1", - "sha256": "12zh7y3pwidclscgvd0b0iaqq9j5y8mc8xd6pz4vs0jy5qs3ahar", - "depends": ["base64url", "dplyr", "httr", "jsonlite", "magrittr", "MMWRweek", "mockery", "readr", "rlang", "webmockr"] + "version": "1.0.1", + "sha256": "0j1zyclfhl1njwyg7x4jg4vqaphiikplqa8b4ch9hrzlvjjw7zk8", + "depends": ["MMWRweek", "base64url", "data_table", "dplyr", "httr", "jsonlite", "lubridate", "magrittr", "readr", "rlang"] }, "zonebuilder": { "name": "zonebuilder", @@ -125433,8 +126705,8 @@ }, "zonohedra": { "name": "zonohedra", - "version": "0.2-2", - "sha256": "0bvlrbc3nkaw9pjzl65idw8ybk7frhyihr3cp93jby5rnip8xpyz", + "version": "0.3-0", + "sha256": "1xkli50nkhv7ygjrv7d9kcv4lq6wi7rxwvr13jg042571rml5l49", "depends": ["logger"] }, "zoo": { @@ -125447,7 +126719,7 @@ "name": "zooimage", "version": "5.5.2", "sha256": "0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8", - "depends": ["digest", "DT", "filehash", "jpeg", "MASS", "mda", "mlearning", "png", "shiny", "svDialogs", "svMisc", "tiff"] + "depends": ["DT", "MASS", "digest", "filehash", "jpeg", "mda", "mlearning", "png", "shiny", "svDialogs", "svMisc", "tiff"] }, "zoolog": { "name": "zoolog", @@ -125469,9 +126741,9 @@ }, "zoomerjoin": { "name": "zoomerjoin", - "version": "0.1.4", - "sha256": "00ckdb9nxvxwk8rw8dxa7craq1hah26bnhl70cgrhw72mmxggvmb", - "depends": ["dplyr", "tibble", "tidyr"] + "version": "0.1.5", + "sha256": "09k18igddp4lwakd0k8vg767sahw5rq6ww9fkwhxwh6rxlx4bj2y", + "depends": ["collapse", "dplyr", "tibble", "tidyr"] }, "zoomr": { "name": "zoomr", @@ -125489,13 +126761,13 @@ "name": "ztable", "version": "0.2.3", "sha256": "1ps7ix0hc84s0p0ra6bkjxky3cffs1rvdcagqzj78lbdq22dk5j8", - "depends": ["flextable", "magrittr", "officer", "RColorBrewer", "rstudioapi", "scales", "stringr"] + "depends": ["RColorBrewer", "flextable", "magrittr", "officer", "rstudioapi", "scales", "stringr"] }, "ztpln": { "name": "ztpln", "version": "0.1.2", "sha256": "1b22m72a8117yrgq5k1gzsrbx6yrsrj7bpd49lh7x3vbaz56c0wr", - "depends": ["DistributionUtils", "mixtools", "Rcpp", "RcppEigen", "RcppNumerical"] + "depends": ["DistributionUtils", "Rcpp", "RcppEigen", "RcppNumerical", "mixtools"] }, "ztype": { "name": "ztype", @@ -125648,6 +126920,20 @@ "depends": ["maptools", "raster", "rgdal", "sp", "withr"], "broken": true }, + "ARDECO": { + "name": "ARDECO", + "version": "1.0.1", + "sha256": "1m249r65kh18v57wlhg9fv26fla5sbxqfqm725f95677ck852jf2", + "depends": ["dplyr", "ghql", "httr", "jsonlite", "rjstat", "tidyr"], + "broken": true + }, + "AROC": { + "name": "AROC", + "version": "1.0-4", + "sha256": "0wwv63mlh8pl5pzaih57l2qy70fz2wpfyxns1lyp95sxhq7ddwza", + "depends": ["Hmisc", "MASS", "Matrix", "moments", "nor1mix", "np", "spatstat_geom"], + "broken": true + }, "ARTP2": { "name": "ARTP2", "version": "0.9.45", @@ -125718,13 +127004,6 @@ "depends": ["AWR", "jsonlite", "rJava"], "broken": true }, - "ActiSleep": { - "name": "ActiSleep", - "version": "0.2.1", - "sha256": "0nkfddfv0g1bvsg6811lrmy0cx7knmi225snyp22bh9ly9fnlqp8", - "depends": ["accelerometry", "DBI", "dplyr", "lazyeval", "lubridate", "RSQLite", "stringr", "tibble"], - "broken": true - }, "ActiveDriverWGS": { "name": "ActiveDriverWGS", "version": "1.2.0", @@ -126096,13 +127375,6 @@ "depends": [], "broken": true }, - "BaSTA": { - "name": "BaSTA", - "version": "1.9.5", - "sha256": "09wvfg44g9j3gq9arkm2ajm8l4y7gna4fh49ihvmjzqdvsl6gkq6", - "depends": ["snowfall"], - "broken": true - }, "BacArena": { "name": "BacArena", "version": "1.8.2", @@ -126397,6 +127669,13 @@ "depends": ["np"], "broken": true }, + "CARlasso": { + "name": "CARlasso", + "version": "0.1.2", + "sha256": "05r5n5bh0fpwfigr6czh9pg29zyrw73idfvs9qm8vr3dvcmvc42r", + "depends": ["coda", "ggplot2", "ggraph", "igraph", "MASS", "Matrix", "Rcpp", "RcppArmadillo", "RcppProgress"], + "broken": true + }, "CATkit": { "name": "CATkit", "version": "3.3.3", @@ -126677,13 +127956,6 @@ "depends": [], "broken": true }, - "ChangePointTaylor": { - "name": "ChangePointTaylor", - "version": "0.2", - "sha256": "0rf3h7l8l6fw2i489ldcqhsf9ppjzpx298p5ciyp9iyc0zcykz38", - "depends": ["bench", "dplyr", "ggplot2", "magrittr", "purrr", "Rcpp", "rlang", "tidyr"], - "broken": true - }, "ChargeTransport": { "name": "ChargeTransport", "version": "1.0.2", @@ -126747,13 +128019,6 @@ "depends": [], "broken": true }, - "CommEcol": { - "name": "CommEcol", - "version": "1.7.1", - "sha256": "1s6x4mhcx64qdzmp83x3mzmwyj1biawmdj2y752xpm8gpxfjnbc0", - "depends": ["adespatial", "ape", "betapart", "gmp", "picante", "vegan"], - "broken": true - }, "CommT": { "name": "CommT", "version": "0.1.1", @@ -127020,6 +128285,13 @@ "depends": ["Matrix"], "broken": true }, + "DMCfun": { + "name": "DMCfun", + "version": "3.5.4", + "sha256": "0kw0hzg5hwj76yz02ws62dmji7ggjm5isnh4blfhw55fsn7b6aic", + "depends": ["BH", "DEoptim", "dplyr", "pbapply", "Rcpp", "tidyr"], + "broken": true + }, "DMLLZU": { "name": "DMLLZU", "version": "0.1.1", @@ -127573,6 +128845,13 @@ "depends": ["kerdiest", "KernSmooth", "MASS", "mgcv", "nlme", "pspline", "sfsmisc"], "broken": true }, + "FCSlib": { + "name": "FCSlib", + "version": "1.3.0", + "sha256": "1191ba6dwpakcdnbcq61zm5xq24isxjnn98nmvk67fpf1ycw70w9", + "depends": ["bitops", "fields", "stringr", "tiff"], + "broken": true + }, "FDRSeg": { "name": "FDRSeg", "version": "1.0-3", @@ -127601,11 +128880,11 @@ "depends": [], "broken": true }, - "FLightR": { - "name": "FLightR", - "version": "0.5.4", - "sha256": "1lbdh4m0s12617s7sarqhlj88j3rn8zaiiwz361rx83map4vvhad", - "depends": ["bit", "CircStats", "circular", "fields", "geosphere", "ggmap", "ggplot2", "ggsn", "maps", "mgcv", "nlme", "RcppArmadillo", "sf", "suntools", "truncnorm"], + "FLSSS": { + "name": "FLSSS", + "version": "9.1.3", + "sha256": "1mjjnasc5f3l44dch7wjxl0b6jbcyjkk6m5b3xgjrir5qyy7fmdk", + "depends": ["Rcpp", "RcppParallel"], "broken": true }, "FPCA2D": { @@ -128392,13 +129671,6 @@ "depends": ["checkmate", "DiagrammeR", "dplyr", "graph", "magrittr", "nnet", "pixiedust", "plyr", "rjags", "stringr"], "broken": true }, - "HypergeoMat": { - "name": "HypergeoMat", - "version": "4.0.2", - "sha256": "06ljg2v0dbqi9mf2l236p616x62cbx4q05qymbsj8inmajwv0piz", - "depends": ["EigenR", "gsl", "JuliaConnectoR", "Rcpp", "RcppEigen"], - "broken": true - }, "IAbin": { "name": "IAbin", "version": "1.0", @@ -128455,13 +129727,6 @@ "depends": ["data_table", "httr", "tibble"], "broken": true }, - "IDSpatialStats": { - "name": "IDSpatialStats", - "version": "0.3.12", - "sha256": "0gkicafnzq8aq9bmbbr9n868sh91dwkhs1dk4wry5vkbfaawfxis", - "depends": ["doParallel", "foreach", "igraph", "spatstat_core", "spatstat_geom"], - "broken": true - }, "IFAA": { "name": "IFAA", "version": "1.1.2", @@ -129337,6 +130602,13 @@ "depends": ["changepoint", "glmnet", "HDPenReg", "R_utils", "spikeslab"], "broken": true }, + "MPCR": { + "name": "MPCR", + "version": "1.1.2", + "sha256": "0hq6df8rz7hi1s4kpcxlx21kppn70fjki8wfy6gi8kna8bmayyf7", + "depends": ["Rcpp"], + "broken": true + }, "MPINet": { "name": "MPINet", "version": "1.0", @@ -129449,6 +130721,13 @@ "depends": ["prismatic", "raster", "rgdal"], "broken": true }, + "MantaID": { + "name": "MantaID", + "version": "1.0.2", + "sha256": "01rc9p4ydq7s2iwqc017ijdbw8w8n0s82f0j69gsl6m5fbqm9a4k", + "depends": ["biomaRt", "caret", "data_table", "dplyr", "ggcorrplot", "ggplot2", "keras", "magrittr", "mlr3", "mlr3tuning", "paradox", "purrr", "RColorBrewer", "reshape2", "scutr", "stringr", "tibble", "tidyr", "tidyselect"], + "broken": true + }, "MapeBay": { "name": "MapeBay", "version": "0.1.0", @@ -129582,6 +130861,13 @@ "depends": ["igraph"], "broken": true }, + "MetaculR": { + "name": "MetaculR", + "version": "0.4.1", + "sha256": "130ic9q221lmnr5wzmw7bbskqzi5gmw8ark5zpw3y8wy9zbv2m98", + "depends": ["assertthat", "clipr", "cowplot", "dplyr", "ggplot2", "ggrepel", "httr", "jsonlite", "magrittr", "progress", "spatstat_geom", "tidyr", "verification"], + "broken": true + }, "MetaheuristicFPA": { "name": "MetaheuristicFPA", "version": "1.0", @@ -129624,13 +130910,6 @@ "depends": ["CompQuadForm"], "broken": true }, - "MicroSEC": { - "name": "MicroSEC", - "version": "1.1.3", - "sha256": "1imdxm15f792xw5kc9lhry5jsw739j6y3f2fs64abj22hqxfwypi", - "depends": ["BiocGenerics", "Biostrings", "data_table", "dplyr", "GenomeInfoDb", "GenomicAlignments", "gtools", "magrittr", "openxlsx", "R_utils", "Rsamtools", "stringr", "tidyr"], - "broken": true - }, "MinBAR": { "name": "MinBAR", "version": "1.1.3", @@ -129680,6 +130959,13 @@ "depends": ["doParallel", "dplyr", "foreach", "magrittr", "Matrix", "slam", "tm", "topicmodels"], "broken": true }, + "MobileTrigger": { + "name": "MobileTrigger", + "version": "0.0.31", + "sha256": "1zbnxdxh6gr4sgpi10i0pnd85f7i842105jgjswacziqamby6mcy", + "depends": ["caret", "ggplot2", "kableExtra", "knitr", "mailR", "plyr", "XML", "yaml"], + "broken": true + }, "ModelGood": { "name": "ModelGood", "version": "1.0.9", @@ -129750,6 +131036,13 @@ "depends": ["nlme", "reshape"], "broken": true }, + "Multiaovbay": { + "name": "Multiaovbay", + "version": "0.1.0", + "sha256": "0c5563h9v2xnxbxf9qkd567v154lnjnlyvc5aqbv4vd7awi8mn71", + "depends": ["BayesFactor", "broom", "car", "dplyr", "DT", "ggplot2", "ggstatsplot", "highcharter", "htmltools", "moments", "nortest", "PMCMRplus", "purrr", "reshape", "shiny", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "stringr", "tibble", "waiter"], + "broken": true + }, "Myrrix": { "name": "Myrrix", "version": "1.2", @@ -129764,6 +131057,13 @@ "depends": ["rJava"], "broken": true }, + "NADIA": { + "name": "NADIA", + "version": "0.4.2", + "sha256": "19545sc75a82smjvvyd353wjlh3wwzhwapcrk9fkg3ffjv9p4a3n", + "depends": ["Amelia", "data_table", "doParallel", "foreach", "glmnet", "mice", "missForest", "missMDA", "missRanger", "mlr3", "mlr3learners", "mlr3pipelines", "paradox", "rpart", "softImpute", "testthat", "VIM"], + "broken": true + }, "NB": { "name": "NB", "version": "0.9", @@ -129862,13 +131162,6 @@ "depends": [], "broken": true }, - "NPRED": { - "name": "NPRED", - "version": "1.0.7", - "sha256": "0nkfgc9zy3gszmnay77yj7i0p8w1q8j1m9wb05hkrmhiacp4mbn4", - "depends": [], - "broken": true - }, "NPS": { "name": "NPS", "version": "1.1", @@ -130079,6 +131372,13 @@ "depends": ["clinfun", "mvtnorm"], "broken": true }, + "OptiSembleForecasting": { + "name": "OptiSembleForecasting", + "version": "0.1.0", + "sha256": "0j1xjh59iyb99p73wjvqr8yrsj6yplsl2rrx50bds9ksjbq1qmym", + "depends": ["caretForecast", "dplyr", "factoextra", "FactoMineR", "forecast", "keras", "kknn", "MCS", "metaheuristicOpt", "Metrics", "neuralnet", "readxl", "tensorflow", "tibble", "tsutils"], + "broken": true + }, "OrdinalLogisticBiplot": { "name": "OrdinalLogisticBiplot", "version": "0.4", @@ -130163,13 +131463,6 @@ "depends": ["bcp", "changepoint", "chipPCR", "ecp", "fda_usc", "MBmca", "pbapply", "pracma", "qpcR", "robustbase", "segmented", "shiny", "zoo"], "broken": true }, - "PDXpower": { - "name": "PDXpower", - "version": "1.0.0", - "sha256": "144phmshjmm891f8sd8aagm7ql6hwb1i24mbpcfgak61q7anw2xy", - "depends": ["frailtypack", "ggplot2", "ggpubr", "nlme", "survival"], - "broken": true - }, "PEMM": { "name": "PEMM", "version": "1.0", @@ -130240,13 +131533,6 @@ "depends": [], "broken": true }, - "PRANA": { - "name": "PRANA", - "version": "1.0.4", - "sha256": "1i9gwz4dlsz9w0z3d995w6s6f10gwvwhyb77agbmmwym1fd2k2wh", - "depends": ["dnapath", "dplyr", "minet", "robustbase"], - "broken": true - }, "PROTOLIDAR": { "name": "PROTOLIDAR", "version": "0.1", @@ -131493,6 +132779,13 @@ "depends": ["Rcpp", "RcppArmadillo", "Rdpack"], "broken": true }, + "Rraven": { + "name": "Rraven", + "version": "1.0.13", + "sha256": "0nlqr1hzbzbz4rb3hjy01iw8czhaqvwmy9hh728fgl5vajwqwn8g", + "depends": ["NatureSounds", "pbapply", "seewave", "tuneR", "warbleR"], + "broken": true + }, "Rrdrand": { "name": "Rrdrand", "version": "0.1-16", @@ -131745,13 +133038,6 @@ "depends": ["JM"], "broken": true }, - "SFSI": { - "name": "SFSI", - "version": "1.3.1", - "sha256": "1h085bihjlbfa1ma63ngcshfw97fx0k879lpxjj82s1dbazagkdg", - "depends": ["ggplot2", "igraph", "reshape2", "scales", "tensorEVD", "viridis"], - "broken": true - }, "SHIP": { "name": "SHIP", "version": "1.0.2", @@ -132088,6 +133374,13 @@ "depends": ["data_table", "igraph", "XML"], "broken": true }, + "ShapeRotator": { + "name": "ShapeRotator", + "version": "0.1.0", + "sha256": "1pg2m1wh7fbchm8gp3mngfnf5g2rbhvzim1bpzqyvxqpx6ynicsa", + "depends": ["plot3D"], + "broken": true + }, "ShinyImage": { "name": "ShinyImage", "version": "0.1.0", @@ -132193,13 +133486,6 @@ "depends": ["EBImage"], "broken": true }, - "SmithWilsonYieldCurve": { - "name": "SmithWilsonYieldCurve", - "version": "1.0.1", - "sha256": "0qvhd1dn2wm9gzyp6k7iq057xqpkngkb4cfmvmjqmf0vhysp371w", - "depends": [], - "broken": true - }, "SoDA": { "name": "SoDA", "version": "1.0-6.1", @@ -132886,6 +134172,13 @@ "depends": ["car", "MASS", "nloptr", "psych", "reshape2", "shiny", "zoo"], "broken": true }, + "VAJointSurv": { + "name": "VAJointSurv", + "version": "0.1.0", + "sha256": "19ib4b1kf1zg4l571f2asxkwbab44pzs954agj0wx1p6kb2v608q", + "depends": ["lme4", "Matrix", "psqn", "Rcpp", "RcppArmadillo", "RcppEigen", "SimSurvNMarker", "survival", "testthat"], + "broken": true + }, "VARMER": { "name": "VARMER", "version": "1.0.0", @@ -133243,13 +134536,6 @@ "depends": ["circular", "mclust", "overlap", "runjags"], "broken": true }, - "adass": { - "name": "adass", - "version": "1.0.0", - "sha256": "1g702pg335q9jwgdygb7n364ibad6z27fcd9yfim8gi4fcpjwlkq", - "depends": ["fda", "matrixcalc", "mvtnorm", "plot3D", "Rfast", "SparseM"], - "broken": true - }, "adhoc": { "name": "adhoc", "version": "1.1", @@ -133278,6 +134564,13 @@ "depends": ["assertthat", "dplyr", "lubridate", "stringr"], "broken": true }, + "affluenceIndex": { + "name": "affluenceIndex", + "version": "2.1", + "sha256": "0vcg4gphs0yxdxsgw7kj9r3hvjpfs2z8sjvllvfw9ki3y7jy5jb8", + "depends": ["spatstat", "spatstat_geom"], + "broken": true + }, "agroclim": { "name": "agroclim", "version": "0.3.0", @@ -133425,6 +134718,34 @@ "depends": ["coda", "MCMCpack", "pscl", "wnominate"], "broken": true }, + "antaresEditObject": { + "name": "antaresEditObject", + "version": "0.7.0", + "sha256": "1v9lhaw2cs4ggfpwi1zdlganks3xrnlsycziv0h3zi5zg45mar7v", + "depends": ["antaresRead", "assertthat", "cli", "data_table", "doFuture", "doParallel", "future", "httr", "jsonlite", "lifecycle", "memuse", "pbapply", "plyr", "progressr", "whisker", "yaml"], + "broken": true + }, + "antaresProcessing": { + "name": "antaresProcessing", + "version": "0.18.1", + "sha256": "1dlq850xqh9534ws88ma3vv5r79cbabn6r6a2jmicxx116s7wjrz", + "depends": ["antaresRead", "data_table"], + "broken": true + }, + "antaresRead": { + "name": "antaresRead", + "version": "2.7.0", + "sha256": "0rgb2glphf6f4vw1hrjxm1f2lhdsx1zag6r0bqgvmzkqipvp97zk", + "depends": ["bit64", "data_table", "doParallel", "httr", "jsonlite", "lifecycle", "lubridate", "memuse", "pbapply", "plyr", "purrr", "shiny", "stringi", "stringr"], + "broken": true + }, + "antaresViz": { + "name": "antaresViz", + "version": "0.18.0", + "sha256": "1lffsxv8fy3yq6rx6520rizp9f74d8bd78by5n209yr9yhw1629r", + "depends": ["antaresProcessing", "antaresRead", "assertthat", "data_table", "dygraphs", "geojsonio", "htmltools", "htmlwidgets", "leaflet", "leaflet_minicharts", "lubridate", "manipulateWidget", "plotly", "rAmCharts", "sf", "shiny", "sp", "spMaps", "webshot"], + "broken": true + }, "aof": { "name": "aof", "version": "0.1.2", @@ -133439,6 +134760,13 @@ "depends": ["ape", "coda", "cubature", "pbapply", "quantreg"], "broken": true }, + "appler": { + "name": "appler", + "version": "0.2.1", + "sha256": "0y0nj8ac6cm1qvbzy2w93j638s0f4mj2b1b9g2rw046rrf7maiz4", + "depends": ["httr", "jsonlite", "rvest"], + "broken": true + }, "apricom": { "name": "apricom", "version": "1.0.0", @@ -133453,6 +134781,13 @@ "depends": [], "broken": true }, + "apt": { + "name": "apt", + "version": "3.0", + "sha256": "14njvpf6q34nffm3r9gqcszlabzbydsxqj0ln9nk4mv59izp8sqm", + "depends": ["car", "erer", "urca"], + "broken": true + }, "aptg": { "name": "aptg", "version": "0.1.1", @@ -133628,6 +134963,13 @@ "depends": [], "broken": true }, + "async": { + "name": "async", + "version": "0.3.2", + "sha256": "0xf3c6gr04drv7xxzpshycd13h5lm7r529f5q4ajrsl0m3hp9xpv", + "depends": ["iterors", "later", "nseval", "promises", "stringr", "testthat"], + "broken": true + }, "asypow": { "name": "asypow", "version": "2015.6.25", @@ -133677,6 +135019,13 @@ "depends": ["checkmate", "cli", "glue", "httr", "jsonlite", "magrittr", "ows4R", "R6", "sf", "stringr"], "broken": true }, + "autocart": { + "name": "autocart", + "version": "1.4.5", + "sha256": "1zgcmrm4dkdnr130hwwka2nwdczgvc3jc9hxrb6nfs8ijb24gl36", + "depends": ["fields", "mgcv", "Rcpp", "RcppArmadillo", "RcppParallel"], + "broken": true + }, "autoencoder": { "name": "autoencoder", "version": "1.1", @@ -133740,13 +135089,6 @@ "depends": [], "broken": true }, - "babette": { - "name": "babette", - "version": "2.3.3", - "sha256": "0c9v6dm3n9bnr5x4nln9a51dff557vrhxdfji9xikwnz0vv8656v", - "depends": ["beastier", "beautier", "mauricer", "phangorn", "remotes", "stringr", "tracerer", "xml2"], - "broken": true - }, "babsim_hospital": { "name": "babsim.hospital", "version": "11.8.8", @@ -133768,13 +135110,6 @@ "depends": ["doParallel", "foreach", "kedd", "mclust"], "broken": true }, - "baggingbwsel": { - "name": "baggingbwsel", - "version": "1.0", - "sha256": "0khvkxml4nwkahgl5ijdv0bjgwabmznzq99p71iw26ck808hafkl", - "depends": ["doParallel", "foreach", "kedd", "mclust", "misc3d", "nor1mix", "Rcpp", "rgl", "rpanel", "sm", "tkrplot"], - "broken": true - }, "bamboo": { "name": "bamboo", "version": "0.9.25", @@ -134286,13 +135621,6 @@ "depends": ["bookdown", "knitr", "magick", "xaringan"], "broken": true }, - "boomer": { - "name": "boomer", - "version": "0.1.1", - "sha256": "16gwdvcp8bz5bgmvxsvc9iyz2a6mpwf5vgilc1lhf9l4n0l1m685", - "depends": ["crayon", "pryr", "rlang", "rstudioapi", "styler", "withr"], - "broken": true - }, "boostr": { "name": "boostr", "version": "1.0.0", @@ -134755,6 +136083,13 @@ "depends": ["ggplot2", "survival"], "broken": true }, + "changeRangeR": { + "name": "changeRangeR", + "version": "1.1.0", + "sha256": "0y13wwz62wsh29flb7v094gb47gd6xwjq6fvmkzmlhz8x71f5g1v", + "depends": ["dplyr", "phylobase", "rangeModelMetadata", "raster", "sf", "sp"], + "broken": true + }, "changedetection": { "name": "changedetection", "version": "0.2.0", @@ -134881,13 +136216,6 @@ "depends": [], "broken": true }, - "ciuupi": { - "name": "ciuupi", - "version": "1.1.0", - "sha256": "0czfmmf62p1vml24s87pdwv52spqycchpkqzwk8vyd4n1z27r5s2", - "depends": ["functional", "nloptr", "pracma", "statmod"], - "broken": true - }, "clampSeg": { "name": "clampSeg", "version": "1.1-1", @@ -134986,6 +136314,13 @@ "depends": ["car", "dplyr", "foreach", "lme4", "lmerTest", "mathjaxr", "nlme", "progress", "R_utils", "shiny", "tidyr"], "broken": true }, + "clusteredinterference": { + "name": "clusteredinterference", + "version": "1.0.1", + "sha256": "01w7i9pmvwmrlf5q6y2d48ib0bm16j16xiw4pqnrvbndx4d6wf6n", + "depends": ["cubature", "Formula", "lme4", "numDeriv", "rootSolve"], + "broken": true + }, "clustsig": { "name": "clustsig", "version": "1.1", @@ -135196,13 +136531,6 @@ "depends": ["JuliaCall", "magrittr"], "broken": true }, - "cooltools": { - "name": "cooltools", - "version": "2.1.27", - "sha256": "1f22qpwf9ynqf9n4hl0kz6cy8bsz47dcmvz0wawq2isw5wn3jcs5", - "depends": ["bit64", "celestial", "cubature", "data_table", "FNN", "jpeg", "MASS", "plotrix", "png", "pracma", "randtoolbox", "raster", "Rcpp", "sp"], - "broken": true - }, "coopProductGame": { "name": "coopProductGame", "version": "2.0", @@ -135392,13 +136720,6 @@ "depends": [], "broken": true }, - "crossmatch": { - "name": "crossmatch", - "version": "1.3-1", - "sha256": "082lrv2129mfhwlh99z3g8id3a29s8854skl152bl3ig8pk2gbjz", - "depends": ["nbpMatching", "survival"], - "broken": true - }, "crrp": { "name": "crrp", "version": "1.0", @@ -135742,6 +137063,13 @@ "depends": [], "broken": true }, + "decon": { + "name": "decon", + "version": "1.3-4", + "sha256": "036cv56wf42q2p3d5h15hbrp5rc29xxy20qwv4k1qzhkq6hmw0qs", + "depends": [], + "broken": true + }, "deconstructSigs": { "name": "deconstructSigs", "version": "1.8.0", @@ -136099,13 +137427,6 @@ "depends": ["aricode", "arules", "clusterCrit", "dplyr", "ggplot2", "Gmedian", "MASS", "mice", "NbClust", "ncvreg", "plyr", "scales", "survival", "withr"], "broken": true }, - "docket": { - "name": "docket", - "version": "1.20", - "sha256": "104v18dqhw1npxyhrmpwvvnlmv9n67gh0pfv4983gmzalbka9xk9", - "depends": ["stringr", "XML", "xml2", "zip"], - "broken": true - }, "docreview": { "name": "docreview", "version": "0.0.1", @@ -136204,13 +137525,6 @@ "depends": [], "broken": true }, - "dropR": { - "name": "dropR", - "version": "0.1", - "sha256": "0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs", - "depends": ["plyr", "shiny"], - "broken": true - }, "dse": { "name": "dse", "version": "2020.2-1", @@ -136498,13 +137812,6 @@ "depends": ["curl", "ggplot2", "nhdplusTools", "quantreg", "sbtools", "scales", "sqldf", "stringr", "testit"], "broken": true }, - "emIRT": { - "name": "emIRT", - "version": "0.0.13", - "sha256": "1z6yd9m6vggbp42qms2sg0rbxjpg15x9m8gkdz1p3q4aqrc2ncj0", - "depends": ["pscl", "Rcpp", "RcppArmadillo"], - "broken": true - }, "emba": { "name": "emba", "version": "0.1.8", @@ -136680,6 +137987,13 @@ "depends": ["qtl"], "broken": true }, + "erer": { + "name": "erer", + "version": "3.1", + "sha256": "03pdq3p5c5f20959hgk5q2cx5x10bpgf0qg4z1nvsf31vc5ni77v", + "depends": ["lmtest", "systemfit", "tseries", "urca"], + "broken": true + }, "ergm_userterms": { "name": "ergm.userterms", "version": "3.10.0", @@ -136701,6 +138015,13 @@ "depends": ["rpanel"], "broken": true }, + "err": { + "name": "err", + "version": "0.2.0", + "sha256": "1915b0vmqdd8whwdrqjphld1jaxawh5b7di6wf7q3sx779lblsrs", + "depends": [], + "broken": true + }, "erratum": { "name": "erratum", "version": "2.2.0", @@ -137065,6 +138386,13 @@ "depends": ["energy", "fastICA"], "broken": true }, + "fastLaplace": { + "name": "fastLaplace", + "version": "0.0.2", + "sha256": "172irl97sxkc5m1rk2kxxl8hkb1yf0029k9szkw9qyz0ki8d657w", + "depends": ["bbmle", "fields", "RSpectra"], + "broken": true + }, "fastclime": { "name": "fastclime", "version": "1.4.1", @@ -137121,6 +138449,13 @@ "depends": ["combinat", "glmnet", "MASS"], "broken": true }, + "fcl": { + "name": "fcl", + "version": "0.1.0", + "sha256": "0rskl9q7z5k5q17m3c5w4pdc96m6fdag7nkkjmyyh43wbm4bjb0a", + "depends": ["xts", "ymd"], + "broken": true + }, "fdakma": { "name": "fdakma", "version": "1.3.1", @@ -137247,6 +138582,13 @@ "depends": ["caret", "concaveman", "geosphere", "ggplot2", "raster", "rgeos", "sp", "stringdist", "vegan"], "broken": true }, + "filibustr": { + "name": "filibustr", + "version": "0.2.1", + "sha256": "1q7307fwwrvpgf0ypkhs4ayg4m27vpf3kazsvnf73jk3gi33i0ki", + "depends": ["crul", "dplyr", "haven", "httr2", "lifecycle", "R_utils", "readr", "rlang", "rvest", "stringr", "tidyr", "tidyselect"], + "broken": true + }, "filteRjsats": { "name": "filteRjsats", "version": "1.0", @@ -137422,11 +138764,11 @@ "depends": ["arules", "doParallel", "foreach", "Matrix", "pmml", "pryr", "R_utils", "XML"], "broken": true }, - "frailtypack": { - "name": "frailtypack", - "version": "3.6.0", - "sha256": "03hm6kala923fr02sjmysm2ycxbynsp3h43f8mlw8agi52hf9nz2", - "depends": ["boot", "doBy", "MASS", "nlme", "rootSolve", "shiny", "statmod", "survC1", "survival"], + "fractalRegression": { + "name": "fractalRegression", + "version": "1.2", + "sha256": "1d79bv3lpg1p6zvjsnf8qwm5ajpsklm8gpqm241jv1cgjyfsi64x", + "depends": ["colorRamps", "Rcpp", "RcppArmadillo", "RcppEigen"], "broken": true }, "frambgrowth": { @@ -137779,13 +139121,6 @@ "depends": ["fda"], "broken": true }, - "geohabnet": { - "name": "geohabnet", - "version": "2.1.2", - "sha256": "03d1zv8p5d75qj42g4xfq4fhif304a1wfkcggib5xqwkj5zkqabs", - "depends": ["beepr", "config", "easycsv", "future", "future_apply", "geodata", "geosphere", "igraph", "magrittr", "memoise", "rlang", "rnaturalearth", "stringr", "terra", "viridisLite", "yaml"], - "broken": true - }, "geojsonlint": { "name": "geojsonlint", "version": "0.4.0", @@ -137835,13 +139170,6 @@ "depends": [], "broken": true }, - "geotoolsR": { - "name": "geotoolsR", - "version": "1.1", - "sha256": "162s37j7wh14h91b6acn453bvgpk3cakfi7mgrdvr5bjdqqn7j7v", - "depends": ["dplyr", "geoR", "ggplot2", "tidyr"], - "broken": true - }, "geoviz": { "name": "geoviz", "version": "0.2.2", @@ -137884,6 +139212,20 @@ "depends": ["dplyr", "magrittr", "rvest", "stringr", "tibble", "tidyr", "xml2"], "broken": true }, + "gfilmm": { + "name": "gfilmm", + "version": "2.0.5", + "sha256": "0mn2z4aihz0anpm6d0cpyabhbd88x1cp0wgwxl5hgvkw547818pb", + "depends": ["forcats", "lazyeval", "Matrix", "Rcpp", "RcppEigen", "spatstat", "spatstat_geom"], + "broken": true + }, + "gfilogisreg": { + "name": "gfilogisreg", + "version": "1.0.3", + "sha256": "1x9j2ac7lk2gkcwxkvyc3bj23z5bibhx64lj4nwsgdjq14677502", + "depends": ["BH", "EigenR", "lazyeval", "rcdd", "Rcpp", "RcppArmadillo", "roptim", "spatstat", "spatstat_geom"], + "broken": true + }, "gfmR": { "name": "gfmR", "version": "1.1-0", @@ -138710,6 +140052,13 @@ "depends": ["ada", "AUC", "doParallel", "e1071", "FNN", "foreach", "genalg", "GenSA", "glmnet", "kernelFactory", "NMOF", "nnet", "nnls", "pso", "quadprog", "randomForest", "reportr", "Rmalschains", "ROCR", "rotationForest", "rpart", "soma", "tabuSearch"], "broken": true }, + "hydflood": { + "name": "hydflood", + "version": "0.5.7", + "sha256": "18gw2jipssaid5q004gyvfk56vgvajv69kd0f6zh2fp7sgq5w33d", + "depends": ["hyd1d", "raster", "Rdpack", "sf", "terra"], + "broken": true + }, "hydroApps": { "name": "hydroApps", "version": "0.1-1", @@ -138787,13 +140136,6 @@ "depends": ["msm", "Rcpp", "RcppArmadillo"], "broken": true }, - "iC10": { - "name": "iC10", - "version": "1.5", - "sha256": "1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl", - "depends": ["iC10TrainingData", "impute", "pamr"], - "broken": true - }, "iCiteR": { "name": "iCiteR", "version": "0.2.1", @@ -138871,6 +140213,34 @@ "depends": [], "broken": true }, + "icesDatsu": { + "name": "icesDatsu", + "version": "1.1.0", + "sha256": "0vprh8y6x28q33b6zx9qhq991q0aqn5rhccf44k8211n5dwa555k", + "depends": ["httr", "icesConnect", "jsonlite"], + "broken": true + }, + "icesDatsuQC": { + "name": "icesDatsuQC", + "version": "1.0.1", + "sha256": "0pspd702vg2k7fza9jvj7hdnpjlg4k41mwiq45k7bsr0cbksggsg", + "depends": ["icesDatsu", "sqldf"], + "broken": true + }, + "icesSD": { + "name": "icesSD", + "version": "2.0.0", + "sha256": "1k0i79hh63bmsqw5m6ym2h3dydrjji57lkysp5n9x293lgh04pf2", + "depends": ["httr", "icesConnect"], + "broken": true + }, + "icesVMS": { + "name": "icesVMS", + "version": "1.1.4", + "sha256": "0ppml34s4zz3vav08fjaj71bml8amaslw22zmib0scvw8k70jlir", + "depends": ["glue", "httr", "icesConnect", "icesVocab"], + "broken": true + }, "iconr": { "name": "iconr", "version": "0.1.0", @@ -138906,6 +140276,20 @@ "depends": ["doParallel", "foreach", "survival"], "broken": true }, + "iemisc": { + "name": "iemisc", + "version": "1.0.5", + "sha256": "0dr9p4y0vdwxsd5dqp5ahqnv1sfckb3xy9i0bbas009g5hnzxp92", + "depends": ["anytime", "assertthat", "berryFunctions", "checkmate", "chem_databases", "data_table", "foreach", "fpCompare", "geosphere", "ggplot2", "ggpubr", "gsubfn", "iemiscdata", "lubridate", "matlab", "matlab2r", "measurements", "mgsub", "pracma", "qdapRegex", "ramify", "rivr", "roperators", "round", "sf", "signal", "sjmisc", "stringi", "units", "USA_state_boundaries", "zoo"], + "broken": true + }, + "iemiscdata": { + "name": "iemiscdata", + "version": "1.0.2", + "sha256": "1wsakabhj9majl4w63bpc95ccdvfg7xz9arj0ikvdj6dh1ardac6", + "depends": [], + "broken": true + }, "ifa": { "name": "ifa", "version": "7.0", @@ -139025,6 +140409,13 @@ "depends": ["ltm"], "broken": true }, + "inldata": { + "name": "inldata", + "version": "1.2.3", + "sha256": "0155mx8nx5g1vp3mcfar0n4qbxqyvs0fzqnmd8skrrygfk1aw0y5", + "depends": ["checkmate", "sf", "stringi", "terra"], + "broken": true + }, "inlmisc": { "name": "inlmisc", "version": "0.5.5", @@ -139039,6 +140430,13 @@ "depends": ["cli", "crayon", "doSNOW", "dplyr", "forcats", "foreach", "ggplot2", "glue", "mvtnorm", "optimizeR", "reshape2", "rlang", "scales"], "broken": true }, + "insee": { + "name": "insee", + "version": "1.1.5", + "sha256": "1f6y19dysm0mh3fkrwnqcgi5j1lzy08m3ij3wrx26q2vgwv5lkfg", + "depends": ["crayon", "dplyr", "httr", "openssl", "purrr", "rappdirs", "rlang", "stringr", "tibble", "tidyselect", "xml2"], + "broken": true + }, "insiderTrades": { "name": "insiderTrades", "version": "0.0.1", @@ -139921,6 +141319,13 @@ "depends": ["abind", "doParallel", "dplyr", "foreach", "jsonlite", "magrittr", "processx", "rlang", "tibble", "withr"], "broken": true }, + "lpme": { + "name": "lpme", + "version": "1.1.3", + "sha256": "1ch11cwjci98m7952p9wdsh9fj5y1mjya6ayq0q4wmbm824qfpzb", + "depends": ["decon", "flexmix", "locpol", "Rcpp", "RcppArmadillo"], + "broken": true + }, "lpmodeler": { "name": "lpmodeler", "version": "0.2-1", @@ -140152,6 +141557,13 @@ "depends": ["aucm", "Hmisc", "Rsolnp", "survival"], "broken": true }, + "maxnodf": { + "name": "maxnodf", + "version": "1.0.0", + "sha256": "1czhy3177bb4a5rxi2s4j3c9xn9f0b2pbkdka1dzw6ga389wdwb3", + "depends": ["Rcpp"], + "broken": true + }, "mbclusterwise": { "name": "mbclusterwise", "version": "1.0", @@ -140390,13 +141802,6 @@ "depends": ["corpcor", "evd", "fields", "numDeriv"], "broken": true }, - "mhurdle": { - "name": "mhurdle", - "version": "1.3-0", - "sha256": "1in07zk29z5fhrg75wl1fwbrsny4ihjnrqyh2kz1bd448p10f295", - "depends": ["Formula", "generics", "margins", "maxLik", "numDeriv", "prediction", "Rdpack", "survival", "truncreg"], - "broken": true - }, "miRada": { "name": "miRada", "version": "1.13.8-8", @@ -140453,13 +141858,6 @@ "depends": ["dplyr", "futile_logger", "lubridate", "Rcpp", "stringr"], "broken": true }, - "milorGWAS": { - "name": "milorGWAS", - "version": "0.6", - "sha256": "1gl4lg3m11hkj47g7zqq0xavxzj5z1vjbb88pf03r7200qnb5ff8", - "depends": ["gaston", "Rcpp", "RcppEigen"], - "broken": true - }, "mindr": { "name": "mindr", "version": "1.3.2", @@ -140747,13 +142145,6 @@ "depends": ["dplyr", "ggfittext", "ggplot2", "gridExtra", "magrittr", "RColorBrewer", "rlang", "scales"], "broken": true }, - "modeltime_ensemble": { - "name": "modeltime.ensemble", - "version": "1.0.3", - "sha256": "17mnz2x7i540gzwpqca106saafvsns9ar1q09pnnzkx2m4xv322i", - "depends": ["cli", "doParallel", "dplyr", "foreach", "generics", "glue", "magrittr", "modeltime", "modeltime_resample", "parsnip", "purrr", "recipes", "rlang", "rsample", "stringr", "tibble", "tictoc", "tidyr", "timetk", "tune", "workflows", "yardstick"], - "broken": true - }, "modeltime_gluonts": { "name": "modeltime.gluonts", "version": "0.1.0", @@ -140824,13 +142215,6 @@ "depends": [], "broken": true }, - "moranajp": { - "name": "moranajp", - "version": "0.9.6", - "sha256": "1w28fzwxgrmf12l40f4wl2h8qflbsii7g3wiqxxxg0v6njp49ws1", - "depends": ["dplyr", "ggplot2", "ggraph", "igraph", "magrittr", "purrr", "rlang", "rvest", "stringi", "stringr", "tibble", "tidyr"], - "broken": true - }, "morgenstemning": { "name": "morgenstemning", "version": "1.0", @@ -140838,6 +142222,13 @@ "depends": [], "broken": true }, + "morse": { + "name": "morse", + "version": "3.3.2", + "sha256": "0534k96fhfdkfr3dh6q85fmsqqld7xv1zxvikwcb6z6by3nr9cpp", + "depends": ["coda", "deSolve", "dplyr", "epitools", "ggplot2", "gridExtra", "magrittr", "reshape2", "rjags", "tibble", "tidyr", "zoo"], + "broken": true + }, "mortyr": { "name": "mortyr", "version": "0.0.2", @@ -141328,13 +142719,6 @@ "depends": ["analogue", "dplyr", "httr", "jsonlite", "leaflet", "plyr", "reshape2", "xml2"], "broken": true }, - "neotoma2": { - "name": "neotoma2", - "version": "1.0.3", - "sha256": "1a7qcpypbr7vakrzl039ckv3cdy040gl6m3jpya1s284r30b12fx", - "depends": ["assertthat", "dplyr", "geojsonsf", "gtools", "httr", "jsonlite", "leaflet", "lubridate", "magrittr", "progress", "purrr", "rlang", "sf", "stringr", "tidyr", "uuid", "wk"], - "broken": true - }, "netchain": { "name": "netchain", "version": "0.2.0", @@ -141342,6 +142726,13 @@ "depends": ["gtools", "igraph", "Matrix", "Rcpp", "stringr"], "broken": true }, + "netcox": { + "name": "netcox", + "version": "1.0.1", + "sha256": "04biaynmvqrilp0kdxw55b990j7iqnvn8gr07dhzm9f7r9sr7xk6", + "depends": ["glmnet", "Rcpp", "survival"], + "broken": true + }, "netgen": { "name": "netgen", "version": "1.3.2", @@ -141601,6 +142992,13 @@ "depends": ["jsonlite", "magrittr", "yahoofinancer"], "broken": true }, + "nseval": { + "name": "nseval", + "version": "0.5.1", + "sha256": "10b9kvvnlgc0jpbjnpkjmrkbl8plbkbggckwzy41kv41ha7rgda2", + "depends": [], + "broken": true + }, "nsgp": { "name": "nsgp", "version": "1.0.5", @@ -141685,6 +143083,13 @@ "depends": ["doParallel", "foreach", "forecast", "MASS", "Rcpp", "RcppArmadillo"], "broken": true }, + "ohun": { + "name": "ohun", + "version": "1.0.1", + "sha256": "103s9sv70p9hw6q55j98wri5bxqazfn9hxpk1mm39x7navx3qzvp", + "depends": ["checkmate", "cli", "fftw", "ggplot2", "igraph", "rlang", "seewave", "sf", "tuneR", "warbleR"], + "broken": true + }, "okmesonet": { "name": "okmesonet", "version": "0.1.5", @@ -141811,6 +143216,13 @@ "depends": ["AUC", "data_table", "ggplot2", "knitr", "plyr", "scales", "stringr", "XML"], "broken": true }, + "optimCheck": { + "name": "optimCheck", + "version": "1.0", + "sha256": "1qjkv1mfyn7sw0dkxxcdaqj85vl71cgffpf3k3mvzy0s8yhxjb4n", + "depends": [], + "broken": true + }, "optimr": { "name": "optimr", "version": "2019-12.16", @@ -141846,6 +143258,13 @@ "depends": ["DBI", "ROracle"], "broken": true }, + "orbweaver": { + "name": "orbweaver", + "version": "0.10.2", + "sha256": "1n8gay2nsxh0pc1jc6hgs2n5knk5ajaaqisq2l5dsnkl172r62rf", + "depends": ["glue", "rlang"], + "broken": true + }, "orderbook": { "name": "orderbook", "version": "1.03", @@ -141909,6 +143328,13 @@ "depends": [], "broken": true }, + "otsad": { + "name": "otsad", + "version": "0.2.0", + "sha256": "1jb6raxm70aywbgs7bdyw8vccy1nj924f4hkpjrlgnvzmy0hyhvs", + "depends": ["ggplot2", "plotly", "reticulate", "sigmoid"], + "broken": true + }, "otvPlots": { "name": "otvPlots", "version": "0.2.1", @@ -142266,6 +143692,13 @@ "depends": ["matrixStats"], "broken": true }, + "pedmod": { + "name": "pedmod", + "version": "0.2.4", + "sha256": "1xr98vp2s3s2cw4bjdw6156zas15jxvp9fbyz9rxd68i3zrblplx", + "depends": ["alabama", "BH", "psqn", "Rcpp", "RcppArmadillo", "testthat"], + "broken": true + }, "penDvine": { "name": "penDvine", "version": "0.2.4", @@ -143148,6 +144581,13 @@ "depends": ["RCurl", "rjson", "stringr", "tm", "XML"], "broken": true }, + "rDNAse": { + "name": "rDNAse", + "version": "1.1-1", + "sha256": "0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk", + "depends": [], + "broken": true + }, "rDotNet": { "name": "rDotNet", "version": "0.9.1", @@ -143610,6 +145050,13 @@ "depends": ["broom", "dataverse", "dplyr", "estimatr", "generics", "ggplot2", "prediction", "purrr", "randomizr", "readr", "rlang", "tibble", "tidyr"], "broken": true }, + "read_dbc": { + "name": "read.dbc", + "version": "1.0.7", + "sha256": "1virjl00x1yzby6wvxjdf1kqbjgm2kkdv53b72c0jq4nrfrl55nw", + "depends": ["foreign"], + "broken": true + }, "readSX": { "name": "readSX", "version": "0.8.4", @@ -144037,13 +145484,6 @@ "depends": [], "broken": true }, - "rnaCrosslinkOO": { - "name": "rnaCrosslinkOO", - "version": "0.1.2", - "sha256": "146595ib0730ppx4dxfq7vmvxwgf1vs1w3vkhb8ylrc8id3lki4z", - "depends": ["ClassDiscovery", "doParallel", "foreach", "GenomicRanges", "ggplot2", "ggrepel", "heatmap3", "igraph", "IRanges", "MASS", "mixtools", "patchwork", "R4RNA", "RColorBrewer", "reshape2", "RRNA", "S4Vectors", "seqinr", "tidyverse", "TopDom"], - "broken": true - }, "rngwell19937": { "name": "rngwell19937", "version": "0.6-0", @@ -144093,13 +145533,6 @@ "depends": ["forecast", "Rcpp"], "broken": true }, - "robusTest": { - "name": "robusTest", - "version": "1.0.1", - "sha256": "0rgm0cl47c8ddhbl0da3jdrkxhgy3jqlabmi4fqkc80zcmaldmhi", - "depends": ["Rcpp"], - "broken": true - }, "robustarima": { "name": "robustarima", "version": "0.2.6", @@ -144177,6 +145610,13 @@ "depends": ["assertthat", "combinat", "dplyr", "stringr", "xlsx"], "broken": true }, + "rpdo": { + "name": "rpdo", + "version": "0.3.2", + "sha256": "0sh52y7hmnm9qhyp0m6vp3c23wzz3ds8j577z105s6f3pdf398l0", + "depends": ["chk", "lifecycle"], + "broken": true + }, "rpicosat": { "name": "rpicosat", "version": "1.0.1", @@ -144254,6 +145694,13 @@ "depends": ["checkmate"], "broken": true }, + "rsgeo": { + "name": "rsgeo", + "version": "0.1.6", + "sha256": "04mv8ifl1k2vqacglw0j41j96l9ls8khiligjhk499c5zg4aadip", + "depends": ["rlang", "vctrs"], + "broken": true + }, "rsleep": { "name": "rsleep", "version": "1.0.12", @@ -144303,13 +145750,6 @@ "depends": ["digest", "hellno", "magrittr", "R6", "Rcpp", "RSQLite", "stringb"], "broken": true }, - "rtrim": { - "name": "rtrim", - "version": "2.1.1", - "sha256": "1l2ijkm4p3nd7n4q1b4y9pdyafgyf76zizpi7hhzw1rr9zkxhff2", - "depends": [], - "broken": true - }, "rtsVis": { "name": "rtsVis", "version": "0.0.3", @@ -144317,6 +145757,13 @@ "depends": ["assertthat", "dplyr", "forcats", "ggplot2", "magrittr", "moveVis", "pbapply", "raster", "RStoolbox", "sf", "sp", "tidyr"], "broken": true }, + "rusquant": { + "name": "rusquant", + "version": "1.1.1", + "sha256": "02saxymlmjmbzczhn2ihyn09106005wi39f2q9dyasrzi7n6v6pk", + "depends": ["base64enc", "data_table", "httr", "jose", "jsonlite", "quantmod", "rvest", "stringr", "XML", "xts"], + "broken": true + }, "ruta": { "name": "ruta", "version": "1.2.0", @@ -144562,13 +146009,6 @@ "depends": ["behavr", "curl", "data_table", "memoise", "readr", "RSQLite", "stringr"], "broken": true }, - "scorematchingad": { - "name": "scorematchingad", - "version": "0.0.60", - "sha256": "1jaqhqahg2pszmw9d9pgywpdlzdnwridj54y3mc3kkxwv7npd59r", - "depends": ["ellipsis", "FixedPoint", "MCMCpack", "optimx", "R6", "Rcpp", "RcppEigen", "Rdpack", "rlang"], - "broken": true - }, "scoringTools": { "name": "scoringTools", "version": "0.1.3", @@ -144758,6 +146198,13 @@ "depends": [], "broken": true }, + "seqest": { + "name": "seqest", + "version": "1.0.1", + "sha256": "06zk87n26305m0hy6lg7v3bpxmsqvinwkvw3dvmzkqp5jdkhwikb", + "depends": ["foreach", "geepack", "MASS", "mvtnorm", "nnet", "Rcpp", "RcppArmadillo", "VGAM"], + "broken": true + }, "sequence": { "name": "sequence", "version": "2.0", @@ -144989,6 +146436,13 @@ "depends": ["httr", "raster", "s2", "sf", "xml2"], "broken": true }, + "slopeOP": { + "name": "slopeOP", + "version": "1.0.1", + "sha256": "0rcxa2wdj57aj7n17sxv05dvwchhfsnhssmc372xjfgi72gdnv58", + "depends": ["Rcpp"], + "broken": true + }, "smapr": { "name": "smapr", "version": "0.2.1", @@ -145122,13 +146576,6 @@ "depends": ["assertthat", "cluster", "dplyr", "gplots", "gtools", "R6", "Rcpp", "reshape2", "SPIn", "tensorA"], "broken": true }, - "spNetwork": { - "name": "spNetwork", - "version": "0.4.4", - "sha256": "049fc00rnslairlryzlvgir05ha4pbsdbn0shrbvfh9yhwk2llpk", - "depends": ["abind", "BH", "cubature", "data_table", "dbscan", "future_apply", "ggplot2", "igraph", "progressr", "Rcpp", "RcppArmadillo", "RcppProgress", "Rdpack", "sf", "sfheaders", "spdep"], - "broken": true - }, "space": { "name": "space", "version": "0.1-1.1", @@ -145521,13 +146968,6 @@ "depends": ["dplyr", "lubridate", "purrr", "readr", "readxl", "rlang", "rvest", "sf", "stringr", "tibble", "xml2"], "broken": true }, - "stminsights": { - "name": "stminsights", - "version": "0.4.2", - "sha256": "1a0wglrsl5sr7fc6vhiwva0lmr0ac3ns4rfis2y8ib2vxxwhwb8j", - "depends": ["dplyr", "ggplot2", "ggraph", "ggrepel", "huge", "igraph", "purrr", "readr", "scales", "shiny", "shinyBS", "shinydashboard", "shinyjs", "stm", "stringr", "tibble", "tidygraph"], - "broken": true - }, "stochprofML": { "name": "stochprofML", "version": "2.0.3", @@ -145542,6 +146982,13 @@ "depends": ["processx", "R6"], "broken": true }, + "streamConnect": { + "name": "streamConnect", + "version": "0.0-4", + "sha256": "0sg28i9p6frlccabq9cq2j4w47jgcknwpjhpwl32qrwll7q9k4r3", + "depends": ["callr", "httr", "jsonlite", "plumber", "readr", "stream", "stringr"], + "broken": true + }, "stringb": { "name": "stringb", "version": "0.1.17", @@ -145598,6 +147045,13 @@ "depends": [], "broken": true }, + "subselect": { + "name": "subselect", + "version": "0.15.5", + "sha256": "1xw8ya8kq1b7vn7rp976b3i4bsxvnw53xw34bhsq6xk2c9idk3pw", + "depends": ["corpcor", "ISwR", "MASS"], + "broken": true + }, "subtee": { "name": "subtee", "version": "1.0.1", @@ -145612,11 +147066,11 @@ "depends": ["penalized", "ROCR"], "broken": true }, - "sundialr": { - "name": "sundialr", - "version": "0.1.4.1", - "sha256": "1ln8zbihxfa7dnbhrm254l8qzdw16fhva58p5bd0p8j43grq6qrv", - "depends": ["Rcpp", "RcppArmadillo"], + "supc": { + "name": "supc", + "version": "0.2.6.2", + "sha256": "0gvrmhvjkfbgi0ivwa8ri69rxj4kqn3xqrc2d5rfrdfm9jmqb56h", + "depends": ["BH", "Rcpp"], "broken": true }, "supcluster": { @@ -145878,6 +147332,20 @@ "depends": ["digest", "raster", "sp"], "broken": true }, + "taxonbridge": { + "name": "taxonbridge", + "version": "1.2.2", + "sha256": "1ivks3bvwyn0ybvyz6dhsx7qxnlskf4icjkgsichdv4p24w5iwb9", + "depends": ["dplyr", "ggplot2", "purrr", "rje", "stringr", "vroom", "withr"], + "broken": true + }, + "taxotools": { + "name": "taxotools", + "version": "0.0.139", + "sha256": "1nx79a0jfy0xrd83zk3zwk65mdk35lgz564b3fmhdv9rqpmg9q7n", + "depends": ["plyr", "rmarkdown", "sqldf", "stringdist", "stringi", "stringr", "taxize", "wikitaxa"], + "broken": true + }, "tbart": { "name": "tbart", "version": "1.0", @@ -146025,13 +147493,6 @@ "depends": ["ade4", "broom", "car", "cowplot", "dplyr", "Evomorph", "factoextra", "ggplot2", "ggrepel", "gridExtra", "latex2exp", "lme4", "lsr", "magrittr", "MASS", "Matrix", "plotly", "plyr", "png", "purrr", "rlang", "scales", "scatterplot3d", "shapes", "stringr", "ThreeWay", "tibble", "tidyr", "tidyverse", "vegan", "VGAM"], "broken": true }, - "tidygate": { - "name": "tidygate", - "version": "0.4.9", - "sha256": "0zs2z4xf76d9hw7zwwpd3bisjvq672smbmxl0qgjb7xdzh66cqsf", - "depends": ["dplyr", "lifecycle", "magrittr", "purrr", "RColorBrewer", "rlang", "scales", "stringr", "tibble", "tidyr", "viridis"], - "broken": true - }, "tidylab": { "name": "tidylab", "version": "4.1.1", @@ -146620,6 +148081,13 @@ "depends": ["bio3d", "cowplot", "fastcluster", "ggplot2", "openxlsx", "reshape2", "scales"], "broken": true }, + "varsExplore": { + "name": "varsExplore", + "version": "0.3.0", + "sha256": "0d18wqq7fbs5ljdphsdgqmv8ab0wrzzykjhf4lqksi7n78s1fa2r", + "depends": ["dplyr", "DT", "glue", "magrittr", "purrr", "rio", "rstudioapi", "stringr", "tidyr"], + "broken": true + }, "vbdm": { "name": "vbdm", "version": "0.0.4", @@ -146683,6 +148151,20 @@ "depends": ["dials", "dplyr", "hardhat", "parsnip", "recipes", "rsample", "stacks", "tidyselect", "tune", "workflows", "workflowsets", "yardstick"], "broken": true }, + "visR": { + "name": "visR", + "version": "0.4.1", + "sha256": "1ra2fky23fv3rc9gj4zg64s2c2xcc52whf24wp2nfmg1f0nr278g", + "depends": ["broom", "cowplot", "dplyr", "DT", "forcats", "ggplot2", "gridExtra", "gt", "gtable", "kableExtra", "knitr", "lifecycle", "rlang", "survival", "tibble", "tidycmprsk", "tidyr"], + "broken": true + }, + "visualpred": { + "name": "visualpred", + "version": "0.1.0", + "sha256": "19jq9h9kiv4vbzqz8zrv5gqb1bprq5jy7mcxvdwpfnna2rja6q4z", + "depends": ["data_table", "dplyr", "e1071", "FactoMineR", "gbm", "ggplot2", "ggrepel", "magrittr", "MASS", "MBA", "mltools", "nnet", "pROC", "randomForest"], + "broken": true + }, "vlad": { "name": "vlad", "version": "0.2.2", @@ -146767,13 +148249,6 @@ "depends": ["MASS", "quadprog"], "broken": true }, - "wTO": { - "name": "wTO", - "version": "2.0.2", - "sha256": "0c5cr48h2zvp629iyg1n05fgh1v2wvc5bmzc75c1flrj2rrfs83v", - "depends": ["data_table", "HiClimR", "igraph", "magrittr", "plyr", "reshape2", "Rfast", "som", "visNetwork"], - "broken": true - }, "waccR": { "name": "waccR", "version": "0.1.0", @@ -146788,6 +148263,13 @@ "depends": [], "broken": true }, + "warbleR": { + "name": "warbleR", + "version": "1.1.30", + "sha256": "1fdlivdqawk4g9xb1zc4hdbdd0v44kpdzfb8z75i09zg2nqhgpw1", + "depends": ["bioacoustics", "cli", "dtw", "fftw", "knitr", "monitoR", "NatureSounds", "pbapply", "Rcpp", "RCurl", "rjson", "seewave", "testthat", "tuneR"], + "broken": true + }, "water": { "name": "water", "version": "0.8", @@ -146886,6 +148368,13 @@ "depends": ["ggplot2", "glue", "hellno", "httr", "pageviews", "rvest", "stringr", "xml2"], "broken": true }, + "wikiprofiler": { + "name": "wikiprofiler", + "version": "0.1.3", + "sha256": "1az2phwgy8aqbl9sxvsq1madrdlrw7zshq9fhw5q580xx0lfhkmk", + "depends": ["ggplot2", "ggplotify", "gson", "rsvg", "yulab_utils"], + "broken": true + }, "wildrwolf": { "name": "wildrwolf", "version": "0.6.1", @@ -147124,6 +148613,13 @@ "depends": ["circular", "cowplot", "data_table", "ggplot2", "ggrepel", "nloptr", "plyr", "Rcpp", "RcppEigen", "reshape2", "splusTimeSeries", "tictoc", "TMB", "viridis", "zoo"], "broken": true }, + "yarr": { + "name": "yarr", + "version": "0.1.2", + "sha256": "16q109jrydckz7s1rkmr2sh8q92cgr1c534fvpbh3h0bc3fvvf8g", + "depends": [], + "broken": true + }, "ycinterextra": { "name": "ycinterextra", "version": "0.1",