From 136b2e0c85dc900b22fc0bd8b6bf4c66524fe96c Mon Sep 17 00:00:00 2001
From: Alexis Praga <alexis@praga.dev>
Date: Tue, 5 Aug 2025 10:15:19 +0200
Subject: [PATCH] snpeff: symlink to camelCase

Upstream packages it as camelCase.
---
 pkgs/by-name/sn/snpeff/package.nix | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pkgs/by-name/sn/snpeff/package.nix b/pkgs/by-name/sn/snpeff/package.nix
index c5706f22fd11..554c517fd2f1 100644
--- a/pkgs/by-name/sn/snpeff/package.nix
+++ b/pkgs/by-name/sn/snpeff/package.nix
@@ -33,6 +33,9 @@ stdenv.mkDerivation rec {
     mkdir -p $out/bin
     makeWrapper ${jre}/bin/java $out/bin/snpeff --add-flags "-jar $out/libexec/snpeff/snpEff.jar"
     makeWrapper ${jre}/bin/java $out/bin/snpsift --add-flags "-jar $out/libexec/snpeff/SnpSift.jar"
+    # camelCase is the default
+    ln -s $out/bin/snpeff $out/bin/snpEff
+    ln -s $out/bin/snpsift $out/bin/snpSift
   '';
 
   meta = with lib; {