freebsd-ports/biology/tinker/files/patch-aa

--- ../make/Makefile.orig	Mon Jun 14 10:23:04 1999
+++ ../make/Makefile	Thu Jun 24 22:48:51 1999
@@ -9,8 +9,8 @@
 ##
 ##   1. make all              Build all the TINKER executables
 ##   2. make rename           Move the executables to BINDIR
-##   3. make remove_links     Create soft links in LINKDIR
-##   4. make create_links     Remove soft links from LINKDIR
+##   3. make remove_links     Remove soft links in LINKDIR
+##   4. make create_links     Create soft links from LINKDIR
 ##   6. make listing          Concatenate source to tinker.txt
 ##   5. make clean            Delete objects and executables
 ##
@@ -30,9 +30,9 @@
 ##  LINKDIR      Linked Copies of TINKER Executables
 ##
 
-TINKERDIR = /user/ponder/tinker
-BINDIR = $(TINKERDIR)/bin
-LINKDIR = /usr/local/bin
+TINKERDIR = ${WRKDIR}
+BINDIR = ${PREFIX}/bin
+#LINKDIR = /usr/local/bin
 
 ####################################################################
 ##  Known Machine Types; Uncomment One of the Following Sections  ##
@@ -45,13 +45,13 @@
 ##  Compiler: DEC Fortran 77/90, V4.1
 ##
 
-F77 = /usr/bin/f77
-RM = /sbin/rm
-LIBS =
-F77FLAGS = -c
-OPTFLAGS = -fast -tune host
-LIBFLAGS = -rlv
-LINKFLAGS = -fast -non_shared -om -WL,-om_no_inst_sched
+#F77 = /usr/bin/f77
+#RM = /sbin/rm
+#LIBS =
+#F77FLAGS = -c
+#OPTFLAGS = -fast -tune host
+#LIBFLAGS = -rlv
+#LINKFLAGS = -fast -non_shared -om -WL,-om_no_inst_sched
 
 ##
 ##  Machine:  Silicon Graphics
@@ -104,6 +104,40 @@
 #diagq.o:
 #	${F77} ${F77FLAGS} -ffast-math diagq.f
 
+##
+##  Machine: IntelPC
+##  CPU Type:        Pentium Pro
+##  Oper Sys:        FreeBSD 3.0
+##  Compiler:        f77(f2c/gcc version 2.7.2.1) || egcs g77
+##
+
+F77 = ${FC}
+RM = /bin/rm
+
+.if ${FC}==f77
+.if !defined(HAVE_G2C)
+LIBS = -lU77
+F77FLAGS = -NL400 -c
+LINKFLAGS = -L${PREFIX}/lib
+.else
+LIBS = -lg2c
+F77FLAGS = -Wno-globals -fno-globals -c
+LINKFLAGS =
+.endif
+.elseif ${FC}==g77
+LIBS=
+F77FLAGS = -Wno-globals -fno-globals -c
+LINKFLAGS =
+.endif
+
+OPTFLAGS = ${FFLAGS} -ffast-math
+.if ${MACHINE_ARCH} == "i386"
+OPTFLAGS+= -malign-double
+.endif
+LIBFLAGS = -rcuv
+diagq.o:
+	${F77} ${F77FLAGS} -ffast-math diagq.f
+
 #################################################################
 ##  Should not be Necessary to Change Things Below this Point  ##
 #################################################################
@@ -765,6 +799,7 @@
         volume2.o \
         writeout.o \
         xyzatm.o
+	ranlib libtinker.a
 
 alchemy.x:
 	${F77} ${LINKFLAGS} -o alchemy.x alchemy.o libtinker.a ${LIBS}
@@ -858,51 +893,51 @@
 	${F77} ${LINKFLAGS} -o xyzsybyl.x xyzsybyl.o libtinker.a ${LIBS}
 
 rename:
-	mv  alchemy.x    $(BINDIR)/alchemy
-	mv  analyze.x    $(BINDIR)/analyze
-	mv  anneal.x     $(BINDIR)/anneal
-	mv  archive.x    $(BINDIR)/archive
-	mv  correlate.x  $(BINDIR)/correlate
-	mv  crystal.x    $(BINDIR)/crystal
-	mv  distgeom.x   $(BINDIR)/distgeom
-	mv  document.x   $(BINDIR)/document
-	mv  dynamic.x    $(BINDIR)/dynamic
-	mv  gda.x        $(BINDIR)/gda
-	mv  intedit.x    $(BINDIR)/intedit
-	mv  intxyz.x     $(BINDIR)/intxyz
-	mv  minimize.x   $(BINDIR)/minimize
-	mv  minirot.x    $(BINDIR)/minirot
-	mv  newton.x     $(BINDIR)/newton
-	mv  newtrot.x    $(BINDIR)/newtrot
-	mv  optimize.x   $(BINDIR)/optimize
-	mv  optirot.x    $(BINDIR)/optirot
-	mv  optrigid.x   $(BINDIR)/optrigid
-	mv  path.x       $(BINDIR)/path
-	mv  pdbxyz.x     $(BINDIR)/pdbxyz
-	mv  protein.x    $(BINDIR)/protein
-	mv  pss.x        $(BINDIR)/pss
-	mv  pssrigid.x   $(BINDIR)/pssrigid
-	mv  pssrot.x     $(BINDIR)/pssrot
-	mv  saddle.x     $(BINDIR)/saddle
-	mv  scan.x       $(BINDIR)/scan
-	mv  sniffer.x    $(BINDIR)/sniffer
-	mv  spacefill.x  $(BINDIR)/spacefill
-	mv  superpose.x  $(BINDIR)/superpose
-	mv  sybylxyz.x   $(BINDIR)/sybylxyz
-	mv  testgrad.x   $(BINDIR)/testgrad
-	mv  testhess.x   $(BINDIR)/testhess
-	mv  testlight.x  $(BINDIR)/testlight
-	mv  testrot.x    $(BINDIR)/testrot
-	mv  timer.x      $(BINDIR)/timer
-	mv  timerot.x    $(BINDIR)/timerot
-	mv  vibrate.x    $(BINDIR)/vibrate
-	mv  vibrot.x     $(BINDIR)/vibrot
-	mv  xtalfit.x    $(BINDIR)/xtalfit
-	mv  xtalmin.x    $(BINDIR)/xtalmin
-	mv  xyzedit.x    $(BINDIR)/xyzedit
-	mv  xyzint.x     $(BINDIR)/xyzint
-	mv  xyzpdb.x     $(BINDIR)/xyzpdb
-	mv  xyzsybyl.x   $(BINDIR)/xyzsybyl
+	${INSTALL} -c -s  alchemy.x    $(BINDIR)/alchemy
+	${INSTALL} -c -s  analyze.x    $(BINDIR)/analyze
+	${INSTALL} -c -s  anneal.x     $(BINDIR)/anneal
+	${INSTALL} -c -s  archive.x    $(BINDIR)/archive
+	${INSTALL} -c -s  correlate.x  $(BINDIR)/correlate
+	${INSTALL} -c -s  crystal.x    $(BINDIR)/crystal
+	${INSTALL} -c -s  distgeom.x   $(BINDIR)/distgeom
+	${INSTALL} -c -s  document.x   $(BINDIR)/document
+	${INSTALL} -c -s  dynamic.x    $(BINDIR)/dynamic
+	${INSTALL} -c -s  gda.x        $(BINDIR)/gda
+	${INSTALL} -c -s  intedit.x    $(BINDIR)/intedit
+	${INSTALL} -c -s  intxyz.x     $(BINDIR)/intxyz
+	${INSTALL} -c -s  minimize.x   $(BINDIR)/minimize
+	${INSTALL} -c -s  minirot.x    $(BINDIR)/minirot
+	${INSTALL} -c -s  newton.x     $(BINDIR)/newton
+	${INSTALL} -c -s  newtrot.x    $(BINDIR)/newtrot
+	${INSTALL} -c -s  optimize.x   $(BINDIR)/optimize
+	${INSTALL} -c -s  optirot.x    $(BINDIR)/optirot
+	${INSTALL} -c -s  optrigid.x   $(BINDIR)/optrigid
+	${INSTALL} -c -s  path.x       $(BINDIR)/path
+	${INSTALL} -c -s  pdbxyz.x     $(BINDIR)/pdbxyz
+	${INSTALL} -c -s  protein.x    $(BINDIR)/protein
+	${INSTALL} -c -s  pss.x        $(BINDIR)/pss
+	${INSTALL} -c -s  pssrigid.x   $(BINDIR)/pssrigid
+	${INSTALL} -c -s  pssrot.x     $(BINDIR)/pssrot
+	${INSTALL} -c -s  saddle.x     $(BINDIR)/saddle
+	${INSTALL} -c -s  scan.x       $(BINDIR)/scan
+	${INSTALL} -c -s  sniffer.x    $(BINDIR)/sniffer
+	${INSTALL} -c -s  spacefill.x  $(BINDIR)/spacefill
+	${INSTALL} -c -s  superpose.x  $(BINDIR)/superpose
+	${INSTALL} -c -s  sybylxyz.x   $(BINDIR)/sybylxyz
+	${INSTALL} -c -s  testgrad.x   $(BINDIR)/testgrad
+	${INSTALL} -c -s  testhess.x   $(BINDIR)/testhess
+	${INSTALL} -c -s  testlight.x  $(BINDIR)/testlight
+	${INSTALL} -c -s  testrot.x    $(BINDIR)/testrot
+	${INSTALL} -c -s  timer.x      $(BINDIR)/timer
+	${INSTALL} -c -s  timerot.x    $(BINDIR)/timerot
+	${INSTALL} -c -s  vibrate.x    $(BINDIR)/vibrate
+	${INSTALL} -c -s  vibrot.x     $(BINDIR)/vibrot
+	${INSTALL} -c -s  xtalfit.x    $(BINDIR)/xtalfit
+	${INSTALL} -c -s  xtalmin.x    $(BINDIR)/xtalmin
+	${INSTALL} -c -s  xyzedit.x    $(BINDIR)/xyzedit
+	${INSTALL} -c -s  xyzint.x     $(BINDIR)/xyzint
+	${INSTALL} -c -s  xyzpdb.x     $(BINDIR)/xyzpdb
+	${INSTALL} -c -s  xyzsybyl.x   $(BINDIR)/xyzsybyl
 
 remove_links:
 	rm -f $(LINKDIR)/alchemy