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freebsd-ports/biology/p5-Bio-DB-EMBL/Makefile

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Add p5-Bio-DB-EMBL 1.7.4 Bio::DB::EMBL allows the dynamic retrieval of sequence objects Bio::Seq from the EMBL database using the dbfetch script at EBI. In order to make changes transparent we have host type (currently only ebi) and location (defaults to ebi) separated out. This allows later additions of more servers in different geographical locations. The functionality of this module is inherited from Bio::DB::DBFetch which implements Bio::DB::WebDBSeqI. WWW: https://metacpan.org/release/Bio-DB-EMBL
2019-12-08 16:49:19 +00:00
PORTNAME= Bio-DB-EMBL
PORTVERSION= 1.7.4
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Database object interface for EMBL entry retrieval
Add WWW entries to port Makefiles It has been common practice to have one or more URLs at the end of the ports' pkg-descr files, one per line and prefixed with "WWW:". These URLs should point at a project website or other relevant resources. Access to these URLs required processing of the pkg-descr files, and they have often become stale over time. If more than one such URL was present in a pkg-descr file, only the first one was tarnsfered into the port INDEX, but for many ports only the last line did contain the port specific URL to further information. There have been several proposals to make a project URL available as a macro in the ports' Makefiles, over time. This commit implements such a proposal and moves one of the WWW: entries of each pkg-descr file into the respective port's Makefile. A heuristic attempts to identify the most relevant URL in case there is more than one WWW: entry in some pkg-descr file. URLs that are not moved into the Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr files in order to preserve them. There are 1256 ports that had no WWW: entries in pkg-descr files. These ports will not be touched in this commit. The portlint port has been adjusted to expect a WWW entry in each port Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as deprecated. Approved by: portmgr (tcberner)
2022-09-07 21:06:12 +00:00
WWW= https://metacpan.org/release/Bio-DB-EMBL
Add p5-Bio-DB-EMBL 1.7.4 Bio::DB::EMBL allows the dynamic retrieval of sequence objects Bio::Seq from the EMBL database using the dbfetch script at EBI. In order to make changes transparent we have host type (currently only ebi) and location (defaults to ebi) separated out. This allows later additions of more servers in different geographical locations. The functionality of this module is inherited from Bio::DB::DBFetch which implements Bio::DB::WebDBSeqI. WWW: https://metacpan.org/release/Bio-DB-EMBL
2019-12-08 16:49:19 +00:00
LICENSE= ART10 GPLv1+
LICENSE_COMB= dual
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${RUN_DEPENDS}
RUN_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl
TEST_DEPENDS= p5-Test-Most>=0:devel/p5-Test-Most \
p5-Test-RequiresInternet>=0:devel/p5-Test-RequiresInternet
USES= perl5
USE_PERL5= configure
NO_ARCH= yes
.include <bsd.port.mk>
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