mirror of
https://git.FreeBSD.org/ports.git
synced 2024-10-25 21:07:40 +00:00
36 lines
1.1 KiB
Plaintext
36 lines
1.1 KiB
Plaintext
|
--- Makefile.orig Sat Oct 7 00:16:41 2000
|
||
|
|
+++ Makefile Thu Dec 20 17:26:37 2001
|
||
|
|
@@ -19,10 +19,11 @@
|
||
|
|
## (this could be 'perl5' or otherwise on some systems)
|
||
|
|
PERLBIN = perl
|
||
|
|
|
||
|
|
+prefix = ${PREFIX}
|
||
|
|
## where you want things installed
|
||
|
|
-BINDIR = $(HOME)/bin
|
||
|
|
-LIBDIR = $(HOME)/lib/tRNAscan-SE
|
||
|
|
-MANDIR = $(HOME)/man
|
||
|
|
+BINDIR = $(prefix)/bin
|
||
|
|
+LIBDIR = $(prefix)/share/tRNAscan-SE
|
||
|
|
+MANDIR = $(prefix)/man
|
||
|
|
|
||
|
|
## NOTE !! If you later manually move the location of
|
||
|
|
## binaries or data files in the BINDIR or LIBDIR directories,
|
||
|
|
@@ -106,7 +107,7 @@
|
||
|
|
|
||
|
|
MPOBJ = mpviterbi.o mp-dbviterbi.o
|
||
|
|
|
||
|
|
-all: $(PROGS) tRNAscanSE setpaths
|
||
|
|
+all: $(PROGS) tRNAscanSE
|
||
|
|
|
||
|
|
covels-SE: $(OBJ) scan_main.o
|
||
|
|
$(CC) $(CFLAGS) $(RFLAGS) -o covels-SE scan_main.o $(OBJ) $(LIBS)
|
||
|
|
@@ -178,7 +179,7 @@
|
||
|
|
@echo ""
|
||
|
|
@rm -f testrun.out
|
||
|
|
@echo "tRNAscan-SE -d -y -o testrun.out Demo/F22B7.fa"
|
||
|
|
- @if tRNAscan-SE -d -y -o testrun.out Demo/F22B7.fa; \
|
||
|
|
+ @if ./tRNAscan-SE -d -y -o testrun.out Demo/F22B7.fa; \
|
||
|
|
then echo ""; \
|
||
|
|
else echo "tRNAscan-SE did NOT complete properly."; fi
|
||
|
|
@if diff testrun.out testrun.ref; \
|