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freebsd-ports/biology/seaview/Makefile

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Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
# New ports collection Makefile for: seaview
# Version required: 1.0
# Date created: Dec 5 1997
# Whom: frankch@waru.life.nthu.edu.tw
#
Change Id->FreeBSD.
1999-08-25 04:58:03 +00:00
# $FreeBSD$
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
#
DISTNAME= seaview
PKGNAME= seaview-1.0
Making x11 category more useful project part 1: take out "x11" of ports that are mere users of X. Partial list submitted by: Josh Gilliam <josh@quick.net>
1998-07-27 23:25:33 +00:00
CATEGORIES= biology
Master site changed, update MD5. PR: 8200 Submitted by: frankch@waru.life.nthu.edu.tw (maintainer)
1998-10-08 10:08:33 +00:00
MASTER_SITES= ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
EXTRACT_SUFX= .tar
MAINTAINER= frankch@waru.life.nthu.edu.tw
Mark broken for ELF because of xforms port.
1998-09-26 23:18:10 +00:00
LIB_DEPENDS= xforms.0:${PORTSDIR}/x11-toolkits/xforms
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
Rename all USE_X11 to USE_X_PREFIX. Requires 1.279 (3.0-current) or 1.227.2.41 (2.2-stable) of bsd.port.mk for this to be interpreted correctly.
1998-08-05 09:31:52 +00:00
USE_X_PREFIX= YES
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
NO_WRKSUBDIR= YES
Adjust port Makefiles to new EXTRACT_* variable defaults. See log of bsd.port.mk rev. 1.304 for details on the change. The fix here is one of the following. (1) Define USE_BZIP2 instead of BUILD_DEPENDS on bzip2 and redefining EXTRACT_* commands. (2) Change ${EXTRACT_CMD} to ${TAR} when the command is obviously calling the "tar" command (i.e., arguments like "-xzf" are spelled out). (3) If ${EXTRACT_CMD} is called directly with ${EXTRACT_BEFORE_ARGS}, add ${EXTRACT_AFTER_ARGS} to the command line as well. (4) If any of EXTRACT_CMD, EXTRACT_BEFORE_ARGS or EXTRACT_AFTER_ARGS is set, define the other two too.
1999-02-03 11:12:01 +00:00
EXTRACT_CMD= ${TAR}
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
EXTRACT_BEFORE_ARGS= -xf
Adjust port Makefiles to new EXTRACT_* variable defaults. See log of bsd.port.mk rev. 1.304 for details on the change. The fix here is one of the following. (1) Define USE_BZIP2 instead of BUILD_DEPENDS on bzip2 and redefining EXTRACT_* commands. (2) Change ${EXTRACT_CMD} to ${TAR} when the command is obviously calling the "tar" command (i.e., arguments like "-xzf" are spelled out). (3) If ${EXTRACT_CMD} is called directly with ${EXTRACT_BEFORE_ARGS}, add ${EXTRACT_AFTER_ARGS} to the command line as well. (4) If any of EXTRACT_CMD, EXTRACT_BEFORE_ARGS or EXTRACT_AFTER_ARGS is set, define the other two too.
1999-02-03 11:12:01 +00:00
EXTRACT_AFTER_ARGS= # empty
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
do-install:
@ ${INSTALL_PROGRAM} ${WRKSRC}/${DISTNAME} ${PREFIX}/bin
mkdir -> ${MKDIR}. This also has the side-effect of making this port reinstall-friendly.
1998-03-30 23:44:07 +00:00
@ (${MKDIR} ${PREFIX}/lib/X11/seaview)
Seaview is a multiple DNA sequence alignment editor. It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw>
1997-12-21 22:04:39 +00:00
@ ${INSTALL_DATA} ${WRKSRC}/seaview.help ${PREFIX}/lib/X11/seaview
post-install:
@ ${CAT} ${PKGDIR}/DESCR
.include <bsd.port.mk>
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