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New port: math/mcsim
GNU MCSim is a simulation package, written in C, which allows you to: * design and run your own statistical or simulation models * perform Monte Carlo stochastic simulations * do Bayesian inference through Markov Chain Monte Carlo simulations * formally optimize experimental designs WWW: https://www.gnu.org/software/mcsim/ PR: 240966 Submitted by: Alessandro Sagratini <ale_sagra@hotmail.com>
This commit is contained in:
Kurt Jaeger
parent
b4aec1a638
commit
019727ec20
Notes:
svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=513654
@ -354,6 +354,7 @@
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SUBDIR += matlab-installer
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SUBDIR += maxima
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SUBDIR += mbasecalc
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SUBDIR += mcsim
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SUBDIR += metis
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SUBDIR += metis-edf
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SUBDIR += metis4
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46
math/mcsim/Makefile
Normal file
46
math/mcsim/Makefile
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@ -0,0 +1,46 @@
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# Created by: Alessando Sagratini <ale_sagra@hotmail.com>
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# $FreeBSD$
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PORTNAME= mcsim
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PORTVERSION= 6.1.0
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CATEGORIES= math
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MASTER_SITES= GNU
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MAINTAINER= ale_sagra@hotmail.com
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COMMENT= Monte Carlo stochastic simulations and Bayesian inference
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LICENSE= GPLv3+
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BUILD_DEPENDS= indexinfo>=0.3.0:print/indexinfo
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USES= libtool shebangfix
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USE_LDCONFIG= yes
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INFO= mcsim
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SHEBANG_FILES= sim/makemcsim.in sim/makemcsims.in sim/makemcsimd.in
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INSTALL_TARGET= install-strip
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GNU_CONFIGURE= yes
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OPTIONS_SUB= yes
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CONFIGURE_ARGS= --prefix=${PREFIX}
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OPTIONS_DEFINE= GSL SUNDIALS
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GSL_DESC= GNU Scientific Library support (recommended)
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SUNDIALS_DESC= Sundial's Cvodes integrator
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OPTIONS_DEFAULT=GSL
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.include <bsd.port.options.mk>
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.if ${PORT_OPTIONS:MSUNDIALS}
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BUILD_DEPENDS+= sundials>=3.0.0:math/sundials
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.endif
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.if ${PORT_OPTIONS:MGSL}
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BUILD_DEPENDS+= gsl>=2.5:math/gsl
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.endif
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.include <bsd.port.mk>
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3
math/mcsim/distinfo
Normal file
3
math/mcsim/distinfo
Normal file
@ -0,0 +1,3 @@
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TIMESTAMP = 1569855064
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SHA256 (mcsim-6.1.0.tar.gz) = ab50d8cc89cf307a1d3442dfc53cc07d11f911f390df768ce8e32db6dcf56553
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SIZE (mcsim-6.1.0.tar.gz) = 2292988
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8
math/mcsim/pkg-descr
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8
math/mcsim/pkg-descr
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@ -0,0 +1,8 @@
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GNU MCSim is a simulation package, written in C, which allows you to:
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* design and run your own statistical or simulation models
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* perform Monte Carlo stochastic simulations
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* do Bayesian inference through Markov Chain Monte Carlo simulations
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* formally optimize experimental designs
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WWW: https://www.gnu.org/software/mcsim/
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85
math/mcsim/pkg-plist
Normal file
85
math/mcsim/pkg-plist
Normal file
@ -0,0 +1,85 @@
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bin/makemcsim
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bin/mod
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bin/makemcsims
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bin/makemcsimd
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include/delays.h
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include/matutil.h
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include/list.h
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include/lex.h
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include/sim.h
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include/lexfn.h
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include/hungtype.h
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include/modiface.h
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include/modelu.h
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include/random.h
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include/yourcode.h
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include/config.h
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lib/libmcsim.so.0.0.0
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lib/libmcsim.so.0
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lib/libmcsim.so
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lib/libmcsim.a
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%%DATADIR%%/mod/getopt.c
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%%DATADIR%%/mod/getopt.h
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%%DATADIR%%/mod/hungtype.h
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%%DATADIR%%/mod/lex.c
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%%DATADIR%%/mod/lex.h
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%%DATADIR%%/mod/lexerr.c
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%%DATADIR%%/mod/lexerr.h
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%%DATADIR%%/mod/lexfn.c
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%%DATADIR%%/mod/lexfn.h
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%%DATADIR%%/mod/mod.c
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%%DATADIR%%/mod/mod.h
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%%DATADIR%%/mod/modd.c
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%%DATADIR%%/mod/modd.h
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%%DATADIR%%/mod/modi.c
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%%DATADIR%%/mod/modi.h
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%%DATADIR%%/mod/modiSBML.c
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%%DATADIR%%/mod/modiSBML2.c
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%%DATADIR%%/mod/modiSBML.h
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%%DATADIR%%/mod/modo.c
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%%DATADIR%%/mod/modo.h
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%%DATADIR%%/mod/strutil.c
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%%DATADIR%%/mod/strutil.h
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%%DATADIR%%/sim/delays.c
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%%DATADIR%%/sim/delays.h
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%%DATADIR%%/sim/getopt.c
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%%DATADIR%%/sim/getopt.h
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%%DATADIR%%/sim/hungtype.h
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%%DATADIR%%/sim/lex.c
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%%DATADIR%%/sim/lex.h
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%%DATADIR%%/sim/lexerr.c
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%%DATADIR%%/sim/lexerr.h
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%%DATADIR%%/sim/lexfn.c
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%%DATADIR%%/sim/lexfn.h
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%%DATADIR%%/sim/list.c
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%%DATADIR%%/sim/list.h
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%%DATADIR%%/sim/lsodes.h
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%%DATADIR%%/sim/lsodes1.c
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%%DATADIR%%/sim/lsodes2.c
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%%DATADIR%%/sim/matutil.c
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%%DATADIR%%/sim/matutil.h
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%%DATADIR%%/sim/matutilo.c
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%%DATADIR%%/sim/matutilo.h
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%%DATADIR%%/sim/mh.c
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%%DATADIR%%/sim/mh.h
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%%DATADIR%%/sim/modelu.c
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%%DATADIR%%/sim/modelu.h
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%%DATADIR%%/sim/modiface.h
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%%DATADIR%%/sim/optdsign.c
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%%DATADIR%%/sim/optdsign.h
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%%DATADIR%%/sim/random.c
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%%DATADIR%%/sim/random.h
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%%DATADIR%%/sim/sim.c
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%%DATADIR%%/sim/sim.h
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%%DATADIR%%/sim/simi.c
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%%DATADIR%%/sim/simi.h
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%%DATADIR%%/sim/siminit.c
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%%DATADIR%%/sim/siminit.h
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%%DATADIR%%/sim/simmonte.c
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%%DATADIR%%/sim/simmonte.h
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%%DATADIR%%/sim/simo.c
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%%DATADIR%%/sim/simo.h
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%%DATADIR%%/sim/strutil.c
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%%DATADIR%%/sim/strutil.h
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%%DATADIR%%/sim/yourcode.c
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%%DATADIR%%/sim/yourcode.h
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