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- Update to 2.1.0
PR: 146611 Submitted by: bf <bf1783@gmail.com> (maintainer)
This commit is contained in:
Martin Wilke
parent
0ebc4f9674
commit
13378f3982
Notes:
svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=254801
@ -7,10 +7,10 @@
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#
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PORTNAME= mcmc-jags
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DISTVERSION= 2.0.0-20100430
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PORTVERSION= 2.1.0
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CATEGORIES= math
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MASTER_SITES= SF:1,2,3
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MASTER_SITE_SUBDIR= ${PORTNAME}/JAGS/2.0/Source/:1 \
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MASTER_SITE_SUBDIR= ${PORTNAME}/JAGS/2.x/Source/:1 \
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${PORTNAME}/Examples/2.0/:2 \
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${PORTNAME}/Manuals/2.0/:3
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DISTFILES= ${DISTNAME:S/mcmc-//:U}${EXTRACT_SUFX}:1
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@ -23,17 +23,10 @@ EXTRACT_ONLY= ${DISTNAME:S/mcmc-//:U}${EXTRACT_SUFX}
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MAINTAINER= bf1783@gmail.com
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COMMENT= Just Another Gibbs Sampler
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.if defined(WITH_ATLAS)
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LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas
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CONFIGURE_ARGS= --with-lapack=-lalapack --with-blas=-lf77blas
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.else
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LIB_DEPENDS+= blas.2:${PORTSDIR}/math/blas
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LIB_DEPENDS+= lapack.4:${PORTSDIR}/math/lapack
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CONFIGURE_ARGS= --with-lapack=-llapack --with-blas=-lblas
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.endif
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OPTIONS= ATLAS "use ATLAS libraries instead of BLAS and LAPACK" off
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DIST_SUBDIR= ${PORTNAME}
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WRKSRC= ${WRKDIR}/${PKGNAME:S/mcmc-//:U:R}
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WRKSRC= ${WRKDIR}/${PKGNAME:S/mcmc-//:U}
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GNU_CONFIGURE= yes
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CPPFLAGS+= -I${LOCALBASE}/include
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@ -42,6 +35,18 @@ CONFIGURE_ENV= CPPFLAGS="${CPPFLAGS}" LDFLAGS="${LDFLAGS}"
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USE_FORTRAN= yes
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USE_LDCONFIG= yes
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USE_BISON= build
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PLIST_SUB= PORTVERSION=${PORTVERSION}
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.include <bsd.port.options.mk>
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.if defined(WITH_ATLAS)
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LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas
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CONFIGURE_ARGS= --with-lapack=-lalapack --with-blas=-lf77blas
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.else
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LIB_DEPENDS+= blas.2:${PORTSDIR}/math/blas
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LIB_DEPENDS+= lapack.4:${PORTSDIR}/math/lapack
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CONFIGURE_ARGS= --with-lapack=-llapack --with-blas=-lblas
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.endif
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post-patch:
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${REINPLACE_CMD} -e 's|[(]libdir[)]/pkgconfig|(prefix)/libdata/pkgconfig|g' \
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@ -1,9 +1,9 @@
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MD5 (mcmc-jags/JAGS-2.0.0-20100430.tar.gz) = 0e027c98a7f3ade409a10b5b7ebd0e35
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SHA256 (mcmc-jags/JAGS-2.0.0-20100430.tar.gz) = 9bffe5ebee0896125bf497f22c88f1a751487ed9500f3ddf71bf63fd72d697fc
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SIZE (mcmc-jags/JAGS-2.0.0-20100430.tar.gz) = 1169874
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MD5 (mcmc-jags/classic-bugs.tar.gz) = 7df4366dfb5278cbd4ce43f21b4d9e6c
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SHA256 (mcmc-jags/classic-bugs.tar.gz) = 3814414bb5d23b1757f85cea549561389cf6d514cecad9a9ef945e21f806c3af
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SIZE (mcmc-jags/classic-bugs.tar.gz) = 81193
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MD5 (mcmc-jags/JAGS-2.1.0.tar.gz) = ddb5eb745cb48537517aba186d7030c8
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SHA256 (mcmc-jags/JAGS-2.1.0.tar.gz) = c713a7f1856f2153a94e96bdf26d1e2dff4e3dc9156864d6798d6b3b157d6e68
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SIZE (mcmc-jags/JAGS-2.1.0.tar.gz) = 1171371
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MD5 (mcmc-jags/classic-bugs.tar.gz) = 98d32deaaf134ade265c0a6146291796
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SHA256 (mcmc-jags/classic-bugs.tar.gz) = 3e4902c08c7823a948fba4d7dc32f5140e56c59f170b12e63ac7f4ffc4a7f8cc
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SIZE (mcmc-jags/classic-bugs.tar.gz) = 81313
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MD5 (mcmc-jags/jags_developer_manual.pdf) = 850864bef54ff17858f8bf341b0c13c1
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SHA256 (mcmc-jags/jags_developer_manual.pdf) = 09d06b202adcbc9a52bd889c19c741ffb13f68b6657b9a0a999ad3f89259eb19
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SIZE (mcmc-jags/jags_developer_manual.pdf) = 71199
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@ -74,20 +74,20 @@ include/JAGS/util/integer.h
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include/JAGS/util/logical.h
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include/JAGS/util/nainf.h
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include/JAGS/version.h
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lib/JAGS/modules-2.0.0/basemod.la
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lib/JAGS/modules-2.0.0/basemod.so
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lib/JAGS/modules-2.0.0/bugs.la
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lib/JAGS/modules-2.0.0/bugs.so
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lib/JAGS/modules-2.0.0/dic.la
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lib/JAGS/modules-2.0.0/dic.so
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lib/JAGS/modules-2.0.0/glm.la
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lib/JAGS/modules-2.0.0/glm.so
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lib/JAGS/modules-2.0.0/lecuyer.la
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lib/JAGS/modules-2.0.0/lecuyer.so
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lib/JAGS/modules-2.0.0/mix.la
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lib/JAGS/modules-2.0.0/mix.so
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lib/JAGS/modules-2.0.0/msm.la
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lib/JAGS/modules-2.0.0/msm.so
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lib/JAGS/modules-%%PORTVERSION%%/basemod.la
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lib/JAGS/modules-%%PORTVERSION%%/basemod.so
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lib/JAGS/modules-%%PORTVERSION%%/bugs.la
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lib/JAGS/modules-%%PORTVERSION%%/bugs.so
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lib/JAGS/modules-%%PORTVERSION%%/dic.la
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lib/JAGS/modules-%%PORTVERSION%%/dic.so
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lib/JAGS/modules-%%PORTVERSION%%/glm.la
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lib/JAGS/modules-%%PORTVERSION%%/glm.so
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lib/JAGS/modules-%%PORTVERSION%%/lecuyer.la
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lib/JAGS/modules-%%PORTVERSION%%/lecuyer.so
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lib/JAGS/modules-%%PORTVERSION%%/mix.la
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lib/JAGS/modules-%%PORTVERSION%%/mix.so
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lib/JAGS/modules-%%PORTVERSION%%/msm.la
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lib/JAGS/modules-%%PORTVERSION%%/msm.so
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lib/libjags.la
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lib/libjags.so
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lib/libjags.so.2
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@ -328,6 +328,7 @@ libexec/jags-terminal
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix-data.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix-inits.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix.bug
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/test1.cmd
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/bench-test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs-data.R
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@ -456,7 +457,7 @@ libexec/jags-terminal
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%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/R
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%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%
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%%PORTDOCS%%@dirrm %%DOCSDIR%%
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@dirrm lib/JAGS/modules-2.0.0
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@dirrm lib/JAGS/modules-%%PORTVERSION%%
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@dirrm lib/JAGS
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@dirrm include/JAGS/util
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@dirrm include/JAGS/sarray
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