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biology/py-biopython: Upgrade to 1.77

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Upstream support for python 3

PR:             ports/246763
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net>
This commit is contained in:
Jason W. Bacon 2020-05-29 02:03:29 +00:00
parent def36eb9cf
commit 176e391e4b
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=536875
2 changed files with 11 additions and 9 deletions
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14
biology/py-biopython/Makefile
View File

@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= biopython
PORTVERSION= 1.73
PORTREVISION= 1
DISTVERSION= 1.77
CATEGORIES= biology python
MASTER_SITES= http://www.biopython.org/DIST/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -20,13 +19,16 @@ RUN_DEPENDS= ${PYNUMPY}
USES= python
USE_PYTHON= distutils autoplist
OPTIONS_DEFINE= REPORTLAB
OPTIONS_DEFINE= REPORTLAB
OPTIONS_DEFAULT= REPORTLAB
REPORTLAB_DESC= PDF support in Bio.Graphics module
REPORTLAB_DESC= PDF support in Bio.Graphics module
REPORTLAB_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}reportlab>0:print/py-reportlab@${PY_FLAVOR}
pre-configure: # unbreak for python3: README.rst can't be decoded with the ascii codec: https://github.com/biopython/biopython/issues/1649
@truncate -s 0 ${WRKSRC}/README.rst
post-install:
@${STRIP_CMD} \
${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*.so \
${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*/*.so \
${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*/*/*.so \
.include <bsd.port.mk>

6
biology/py-biopython/distinfo
View File

@ -1,3 +1,3 @@
TIMESTAMP = 1545454134
SHA256 (biopython-1.73.tar.gz) = 70c5cc27dc61c23d18bb33b6d38d70edc4b926033aea3b7434737c731c94a5e0
SIZE (biopython-1.73.tar.gz) = 15715102
TIMESTAMP = 1590688894
SHA256 (biopython-1.77.tar.gz) = fb1936e9ca9e7af8de1050e84375f23328e04b801063edf0ad73733494d8ec42
SIZE (biopython-1.77.tar.gz) = 16837021