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mirror of https://git.FreeBSD.org/ports.git synced 2024-10-22 20:41:26 +00:00

- Remove science/hdf5-18

This commit is contained in:
Sunpoet Po-Chuan Hsieh 2014-05-03 03:25:43 +00:00
parent 607f06163f
commit 41327ce495
Notes: svn2git 2021-03-31 03:12:20 +00:00
svn path=/head/; revision=352858
6 changed files with 0 additions and 339 deletions

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@ -70,7 +70,6 @@
SUBDIR += hdf
SUBDIR += hdf-java
SUBDIR += hdf5
SUBDIR += hdf5-18
SUBDIR += hs-bio
SUBDIR += isaac-cfd
SUBDIR += jmol

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@ -1,73 +0,0 @@
# Created by: Wen Heping <wenheping@gmail.com>
# $FreeBSD$
PORTNAME= hdf5
PORTVERSION= 1.8.10
PORTREVISION= 2
CATEGORIES= science archivers graphics
MASTER_SITES= http://www.hdfgroup.org/ftp/HDF5/current/src/ \
ftp://ftp.hdfgroup.org/HDF5/current/src/ \
http://www.hdfgroup.org/ftp/HDF5/releases/${DISTNAME}/src/ \
ftp://ftp.hdfgroup.org/HDF5/releases/${DISTNAME}/src/
DISTNAME= ${PORTNAME}-${PORTVERSION}-patch1
PKGNAMESUFFIX= -18
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Hierarchical Data Format library (from NCSA)
OPTIONS_DEFINE= DEBUG EXAMPLES FORTRAN SZIP
CONFLICTS_INSTALL= hdf-4.[0-9]* hdf5-1.6.[0-9]*
USES= libtool:keepla tar:bzip2
USE_LDCONFIG= yes
GNU_CONFIGURE= yes
CONFIGURE_ARGS= --enable-cxx \
--enable-instrument \
--enable-strict-format-checks \
--with-pthread=/usr \
--with-zlib=/usr
.include <bsd.port.options.mk>
.if ${PORT_OPTIONS:MDEBUG}
CONFIGURE_ARGS+=--disable-production --enable-debug=all
.endif
.if ${PORT_OPTIONS:MFORTRAN}
USES+= fortran
CONFIGURE_ARGS+=--enable-fortran
CONFIGURE_ENV+= F9X=${FC}
PLIST_SUB+= FORTRAN=""
.else
PLIST_SUB+= FORTRAN="@comment "
.endif
.if ${PORT_OPTIONS:MSZIP}
LIB_DEPENDS+= libsz.so:${PORTSDIR}/science/szip
CONFIGURE_ARGS+=--with-szlib=${LOCALBASE}
.endif
.include <bsd.port.pre.mk>
.if ${ARCH} == "sparc64"
BROKEN= Does not compile on ${ARCH}
.endif
post-patch:
@${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}|g' ${WRKSRC}/configure
@${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags
@${REINPLACE_CMD} \
-e '/LD_LIBRARY_PATH/ s|^|#|' \
-e 's|/share/hdf5_examples|/${EXAMPLESDIR_REL}|' \
-e 's|(INSTALL)|(INSTALL_DATA)|' \
`${FIND} ${WRKSRC} -regex '.*/examples/Makefile.in'`
@${REINPLACE_CMD} -e 's|\[ -a|\[ -f|g' `${FIND} ${WRKSRC} -name \*.sh\*`
.if !${PORT_OPTIONS:MEXAMPLES}
@${REINPLACE_CMD} -e '/^install:/ s|install-examples||' ${WRKSRC}/Makefile.in
.endif
regression-test test: build
cd ${WRKSRC}/ && ${SETENV} ${MAKE_ENV} ${MAKE} check
.include <bsd.port.post.mk>

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@ -1,2 +0,0 @@
SHA256 (hdf5-1.8.10-patch1.tar.bz2) = 292afb3615ad9e68f4d5d18ebb11e4a73f2aece39f2da3875a457ff1e109fc41
SIZE (hdf5-1.8.10-patch1.tar.bz2) = 6010792

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@ -1,11 +0,0 @@
--- ./src/H5FDdirect.c.orig 2011-11-07 14:11:30.000000000 -0800
+++ ./src/H5FDdirect.c 2011-12-21 16:50:03.000000000 -0800
@@ -29,6 +29,8 @@
* this file. */
/* #define _XOPEN_SOURCE 600 */
+#define O_DIRECT 0x00010000
+
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fprivate.h" /* File access */

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@ -1,16 +0,0 @@
HDF5 is a completely new Hierarchical Data Format product consisting of a data
format specification and a supporting library implementation. HDF5 is designed
to address some of the limitations of the older HDF product and to address
current and anticipated requirements of modern systems and applications.
HDF5 includes the following improvements:
- A new file format designed to address some of the deficiencies of HDF4.x,
particularly the need to store larger files and more objects per file.
- A simpler, more comprehensive data model that includes only two basic
structures: a multidimensional array of record structures, and a grouping
structure.
- A simpler, better-engineered library and API, with improved support for
parallel I/O, threads, and other requirements imposed by modern systems
and applications.
WWW: http://www.hdfgroup.org/HDF5/

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@ -1,236 +0,0 @@
bin/gif2h5
bin/h52gif
bin/h5c++
bin/h5cc
bin/h5copy
bin/h5debug
bin/h5diff
bin/h5dump
%%FORTRAN%%bin/h5fc
bin/h5import
bin/h5jam
bin/h5ls
bin/h5mkgrp
bin/h5perf_serial
bin/h5redeploy
bin/h5repack
bin/h5repart
bin/h5stat
bin/h5unjam
include/H5ACpublic.h
include/H5AbstractDs.h
include/H5Apublic.h
include/H5ArrayType.h
include/H5AtomType.h
include/H5Attribute.h
include/H5Classes.h
include/H5CommonFG.h
include/H5CompType.h
include/H5Cpp.h
include/H5CppDoc.h
include/H5Cpublic.h
include/H5DSpublic.h
include/H5DataSet.h
include/H5DataSpace.h
include/H5DataType.h
include/H5DcreatProp.h
include/H5Dpublic.h
include/H5DxferProp.h
include/H5EnumType.h
include/H5Epubgen.h
include/H5Epublic.h
include/H5Exception.h
include/H5FDcore.h
include/H5FDdirect.h
include/H5FDfamily.h
include/H5FDlog.h
include/H5FDmpi.h
include/H5FDmpio.h
include/H5FDmpiposix.h
include/H5FDmulti.h
include/H5FDpublic.h
include/H5FDsec2.h
include/H5FDstdio.h
include/H5FaccProp.h
include/H5FcreatProp.h
include/H5File.h
include/H5FloatType.h
include/H5Fpublic.h
include/H5Gpublic.h
include/H5Group.h
include/H5IMpublic.h
include/H5IdComponent.h
include/H5Include.h
include/H5IntType.h
include/H5Ipublic.h
include/H5LTpublic.h
include/H5Library.h
include/H5Lpublic.h
include/H5MMpublic.h
include/H5Object.h
include/H5Opublic.h
include/H5PTpublic.h
include/H5PacketTable.h
include/H5Ppublic.h
include/H5PredType.h
include/H5PropList.h
include/H5Rpublic.h
include/H5Spublic.h
include/H5StrType.h
include/H5TBpublic.h
include/H5Tpublic.h
include/H5VarLenType.h
include/H5Zpublic.h
include/H5api_adpt.h
%%FORTRAN%%include/H5f90i.h
%%FORTRAN%%include/H5f90i_gen.h
include/H5overflow.h
include/H5pubconf.h
include/H5public.h
include/H5version.h
%%FORTRAN%%include/h5_dble_interface.mod
%%FORTRAN%%include/h5a.mod
%%FORTRAN%%include/h5a_provisional.mod
%%FORTRAN%%include/h5d.mod
%%FORTRAN%%include/h5d_provisional.mod
%%FORTRAN%%include/h5ds.mod
%%FORTRAN%%include/h5e.mod
%%FORTRAN%%include/h5e_provisional.mod
%%FORTRAN%%include/h5f.mod
%%FORTRAN%%include/h5fortran_types.mod
%%FORTRAN%%include/h5g.mod
%%FORTRAN%%include/h5global.mod
%%FORTRAN%%include/h5i.mod
%%FORTRAN%%include/h5im.mod
%%FORTRAN%%include/h5l.mod
%%FORTRAN%%include/h5l_provisional.mod
%%FORTRAN%%include/h5lib.mod
%%FORTRAN%%include/h5lib_provisional.mod
%%FORTRAN%%include/h5lt.mod
%%FORTRAN%%include/h5o.mod
%%FORTRAN%%include/h5o_provisional.mod
%%FORTRAN%%include/h5p.mod
%%FORTRAN%%include/h5p_provisional.mod
%%FORTRAN%%include/h5r.mod
%%FORTRAN%%include/h5r_provisional.mod
%%FORTRAN%%include/h5s.mod
%%FORTRAN%%include/h5t.mod
%%FORTRAN%%include/h5t_provisional.mod
%%FORTRAN%%include/h5tb.mod
%%FORTRAN%%include/h5z.mod
include/hdf5.h
%%FORTRAN%%include/hdf5.mod
include/hdf5_hl.h
lib/libhdf5.a
lib/libhdf5.la
lib/libhdf5.settings
lib/libhdf5.so
lib/libhdf5.so.7
lib/libhdf5.so.7.0.4
lib/libhdf5_cpp.a
lib/libhdf5_cpp.la
lib/libhdf5_cpp.so
lib/libhdf5_cpp.so.7
lib/libhdf5_cpp.so.7.0.4
%%FORTRAN%%lib/libhdf5_fortran.a
%%FORTRAN%%lib/libhdf5_fortran.la
%%FORTRAN%%lib/libhdf5_fortran.so
%%FORTRAN%%lib/libhdf5_fortran.so.7
%%FORTRAN%%lib/libhdf5_fortran.so.7.0.4
lib/libhdf5_hl.a
lib/libhdf5_hl.la
lib/libhdf5_hl.so
lib/libhdf5_hl.so.7
lib/libhdf5_hl.so.7.0.4
lib/libhdf5_hl_cpp.a
lib/libhdf5_hl_cpp.la
lib/libhdf5_hl_cpp.so
lib/libhdf5_hl_cpp.so.7
lib/libhdf5_hl_cpp.so.7.0.4
%%FORTRAN%%lib/libhdf5hl_fortran.a
%%FORTRAN%%lib/libhdf5hl_fortran.la
%%FORTRAN%%lib/libhdf5hl_fortran.so
%%FORTRAN%%lib/libhdf5hl_fortran.so.7
%%FORTRAN%%lib/libhdf5hl_fortran.so.7.0.4
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/README
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/chunks.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/compound.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/create.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/extend_ds.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5group.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/readdata.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/run-c++-ex.sh
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/writedata.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_attribute.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_chunk_read.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_compound.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_drivers.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_elink_unix2win.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_extend_write.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_extlink.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_group.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_mount.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_read.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_ref2reg.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_reference.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_select.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_shared_mesg.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_write.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/ph5example.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/run-c-ex.sh
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c++/ptExampleFL.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c++/ptExampleVL.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c++/run-hlc++-ex.sh
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_ds1.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_image1.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_image2.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite1.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite2.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite3.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_01.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_02.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_03.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_04.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_05.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_06.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_07.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_08.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_09.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_10.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_11.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_12.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/image24pixel.txt
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/image8.txt
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/pal_rgb.h
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ptExampleFL.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ptExampleVL.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/run-hlc-ex.sh
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/ex_ds1.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/exlite.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/run-hlfortran-ex.sh
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/run-hl-ex.sh
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/run-all-ex.sh
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/hyperslab.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/compound.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/grpit.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/run-fortran-ex.sh
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/refobjexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/dsetexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/groupexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/attrexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/selectele.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/grpsexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/refregexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/mountexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/grpdsetexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/rwdsetexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/fileexample.f90
%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/ph5example.f90
%%FORTRAN%%%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/hl/fortran
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/hl/c++
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/hl/c
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/hl
%%FORTRAN%%%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/fortran
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/c++
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/c
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%