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python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)

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reader for python.

WWW:    http://simon.net.nz/articles/python-nexus
This commit is contained in:
Wen Heping 2009-12-29 13:39:14 +00:00
parent c3145e81b2
commit 47dea29df8
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=246859
5 changed files with 35 additions and 0 deletions
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1
biology/Makefile
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@ -83,6 +83,7 @@
SUBDIR += pycogent
SUBDIR += pyfasta
SUBDIR += pymol
SUBDIR += python-nexus
SUBDIR += rasmol
SUBDIR += recombine
SUBDIR += ruby-bio

19
biology/python-nexus/Makefile Normal file
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@ -0,0 +1,19 @@
# Ports collection makefile for: python-nexus
# Date created: 29 Dec, 2009
# Whom: Wen Heping <wen@FreeBSD.org>
#
# $FreeBSD$
#
PORTNAME= python-nexus
PORTVERSION= 0.6d
CATEGORIES= biology python
MASTER_SITES= CHEESESHOP
MAINTAINER= wen@FreeBSD.org
COMMENT= A generic nexus file format reader for python
USE_PYTHON= yes
USE_PYDISTUTILS= easy_install
.include <bsd.port.mk>

3
biology/python-nexus/distinfo Normal file
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@ -0,0 +1,3 @@
MD5 (python-nexus-0.6d.tar.gz) = 79b804e6165823c9b09651c9c318eb30
SHA256 (python-nexus-0.6d.tar.gz) = 2290c35a02879c8f91047638274dd659dc08c694eca2dbdbd7d1907c891c2718
SIZE (python-nexus-0.6d.tar.gz) = 22899

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biology/python-nexus/pkg-descr Normal file
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@ -0,0 +1,4 @@
python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)
reader for python.
WWW: http://simon.net.nz/articles/python-nexus

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biology/python-nexus/pkg-plist Normal file
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@ -0,0 +1,8 @@
bin/nexus_randomise.py
bin/nexus_calc_missings.py
bin/nexus_remove_uniquechars.py
bin/nexus_deinterleave.py
bin/nexus_detranslate.py
bin/nexus_remove_constantchars.py
bin/nexus_combine_nexus.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%