mirror/freebsd-ports
1
0
Fork 0
mirror of https://git.FreeBSD.org/ports.git synced 2024-10-20 20:09:11 +00:00
Code Issues Releases Activity

- Update to 36.3.6

Browse Source 
- Drop maintainership
This commit is contained in:
Wen Heping 2013-07-19 14:08:02 +00:00
parent f5d79b1f3d
commit 50ee70d703
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=323293
5 changed files with 30 additions and 23 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

10
biology/fasta3/Makefile
View File

@ -2,13 +2,13 @@
# $FreeBSD$
PORTNAME= fasta3
PORTVERSION= 36.3.2
PORTVERSION= 36.3.6
CATEGORIES= biology
MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta36/
DISTNAME= fasta-${PORTVERSION}
MAINTAINER= wen@FreeBSD.org
COMMENT= A collection of programs for searching DNA and protein databases
MAINTAINER= ports@FreeBSD.org
COMMENT= Collection of programs for searching DNA and protein databases
NO_CDROM= May not be sold or incorporated into a commercial product
WRKSRC= ${WRKDIR}/${DISTNAME}
@ -23,8 +23,8 @@ FASTA_HOST!= /usr/bin/uname -n
MAKE_ENV+= THR_LIBS=${PTHREAD_LIBS} XDIR=${XDIR} \
FASTA_HOST='"${FASTA_HOST}"'
FASTA3_DOCS= README.versions fasta3x.me fasta3x.doc \
fasta20.doc fasta_func.doc readme.* fasta.defaults \
FASTA3_DOCS= README.versions \
fasta_func.doc readme.* fasta.defaults \
fasta.options fasta_versions.html changes*.html
DATA= data/*.mat
EXAMPLES= seq/*.aa seq/*.lc seq/*.seq seq/*.lib

4
biology/fasta3/distinfo
View File

@ -1,2 +1,2 @@
SHA256 (fasta-36.3.2.tar.gz) = 1eddb7dac3a52311d43bac854b2153c13aa23cbb163952c9e385a75aa2b9e446
SIZE (fasta-36.3.2.tar.gz) = 711876
SHA256 (fasta-36.3.6.tar.gz) = d6c526c307941fe8c98a16406cb01df6bb5712d3c2b7f4a90e126ceba682db6f
SIZE (fasta-36.3.6.tar.gz) = 995298

11
biology/fasta3/files/patch-Makefile.pcom_s Normal file
View File

@ -0,0 +1,11 @@
--- make/Makefile.pcom_s.orig 2013-07-19 16:13:59.000000000 +0800
+++ make/Makefile.pcom_s 2013-07-19 16:14:57.000000000 +0800
@@ -46,7 +46,7 @@
rm -f *.o $(PROGS); rm -rf $(BIN)/*
install: $(PROGS)
- pushd $(BIN); cp $(PROGS) $(XDIR); popd
+ cd $(BIN); cp $(PROGS) $(XDIR); cd ../src
uinstall: $(PROGS)
pushd $(BIN); cp $(PROGS) $(UDIR); popd

11
biology/fasta3/files/patch-Makefile.pcom_t Normal file
View File

@ -0,0 +1,11 @@
--- make/Makefile.pcom_t.orig 2013-07-19 16:14:08.000000000 +0800
+++ make/Makefile.pcom_t 2013-07-19 16:14:34.000000000 +0800
@@ -42,7 +42,7 @@
rm -f *.o $(PROGS); rm -rf $(BIN)/*
install: $(PROGS)
- pushd $(BIN); cp $(PROGS) $(XDIR); popd
+ cd $(BIN); cp $(PROGS) $(XDIR); cd ../src
uinstall: $(PROGS)
pushd $(BIN); cp $(PROGS) $(UDIR); popd

17
biology/fasta3/pkg-plist
View File

@ -1,42 +1,26 @@
bin/fasta%%VER%%
bin/fasta%%VER%%_t
bin/fastf%%VER%%
bin/fastf%%VER%%_t
bin/fastm%%VER%%
bin/fastm%%VER%%_t
bin/fasts%%VER%%
bin/fasts%%VER%%_t
bin/fastx%%VER%%
bin/fastx%%VER%%_t
bin/fasty%%VER%%
bin/fasty%%VER%%_t
bin/ggsearch%%VER%%
bin/ggsearch%%VER%%_t
bin/glsearch%%VER%%
bin/glsearch%%VER%%_t
bin/lalign%%VER%%
bin/lav2ps
bin/lav2svg
bin/map_db
bin/ssearch%%VER%%
bin/ssearch%%VER%%_t
bin/tfastf%%VER%%
bin/tfastf%%VER%%_t
bin/tfastm%%VER%%
bin/tfasts%%VER%%
bin/tfasts%%VER%%_t
bin/tfastx%%VER%%
bin/tfastx%%VER%%_t
bin/tfasty%%VER%%
bin/tfasty%%VER%%_t
etc/fastlibs.sample
%%PORTDOCS%%%%DOCSDIR%%/README
%%PORTDOCS%%%%DOCSDIR%%/COPYRIGHT
%%PORTDOCS%%%%DOCSDIR%%/FASTA_LIST
%%PORTDOCS%%%%DOCSDIR%%/README.versions
%%PORTDOCS%%%%DOCSDIR%%/fasta3x.me
%%PORTDOCS%%%%DOCSDIR%%/fasta3x.doc
%%PORTDOCS%%%%DOCSDIR%%/fasta20.doc
%%PORTDOCS%%%%DOCSDIR%%/fasta_func.doc
%%PORTDOCS%%%%DOCSDIR%%/readme.v30
%%PORTDOCS%%%%DOCSDIR%%/readme.v30t6
@ -55,6 +39,7 @@ etc/fastlibs.sample
%%PORTDOCS%%%%DOCSDIR%%/changes_v34.html
%%PORTDOCS%%%%DOCSDIR%%/changes_v35.html
%%PORTDOCS%%%%DOCSDIR%%/changes_v36.html
%%EXAMPLESDIR%%/dyr_human.aa
%%EXAMPLESDIR%%/egmsmg.aa
%%EXAMPLESDIR%%/gstt1_drome.aa
%%EXAMPLESDIR%%/gtm1_human.aa