mirror/freebsd-ports
1
0
Fork 0
mirror of https://git.FreeBSD.org/ports.git synced 2024-11-19 00:13:33 +00:00
Code Issues Releases Activity

biology/gatk: update 4.4.0.0 → 4.5.0.0

Browse Source 
ChangeLog: https://github.com/broadinstitute/gatk/releases/tag/4.5.0.0
This commit is contained in:
Yuri Victorovich 2023-12-18 01:13:53 -08:00
parent f25b169ac8
commit 620c4e1cad
2 changed files with 8 additions and 8 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

6
biology/gatk/Makefile
View File

@ -1,5 +1,5 @@
PORTNAME= gatk
DISTVERSION= 4.4.0.0
DISTVERSION= 4.5.0.0
CATEGORIES= biology java
EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX}
@ -12,7 +12,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.TXT
BROKEN_FreeBSD_12_powerpc64= fails to build: String index out of range: -1
BUILD_DEPENDS= gradle761:devel/gradle761
BUILD_DEPENDS= gradle:devel/gradle
USES= gettext-runtime
USE_JAVA= yes
@ -88,7 +88,7 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
.endif
do-build:
cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle761 \
cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
${GRADLE_ARGS} --build-cache localJar

10
biology/gatk/distinfo
View File

@ -1,5 +1,5 @@
TIMESTAMP = 1685914727
SHA256 (gatk-4.4.0.0-deps.tar.gz) = 1122d2c0d79048b3a2c507262a76af98b1f1c6e9e70c6d459f458fa33939a58c
SIZE (gatk-4.4.0.0-deps.tar.gz) = 717202736
SHA256 (broadinstitute-gatk-4.4.0.0_GH0.tar.gz) = 026498bdb1e07041abc74e26c84e681d77212a3d3dd66c83249957a0518e4bfe
SIZE (broadinstitute-gatk-4.4.0.0_GH0.tar.gz) = 100594033
TIMESTAMP = 1702890353
SHA256 (gatk-4.5.0.0-deps.tar.gz) = b6bf2e6ff9d64198e4ba185b2c09648bef841d274206603d0f6802e134b10cf5
SIZE (gatk-4.5.0.0-deps.tar.gz) = 883487836
SHA256 (broadinstitute-gatk-4.5.0.0_GH0.tar.gz) = 39b09548ada317b29f19d6cbc0267301ee3565d575a5d79008a0168e679b98d2
SIZE (broadinstitute-gatk-4.5.0.0_GH0.tar.gz) = 104455420