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New port: math/SoPlex: Optimization package for solving linear programming problems (LPs)

Browse Source 
Submitted by:	myself
Approved by:	adamw (mentor)
Differential Revision:	https://reviews.freebsd.org/D13613
This commit is contained in:
Yuri Victorovich 2017-12-25 18:47:47 +00:00
parent f617fe1c36
commit 71268705bb
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=457247
7 changed files with 255 additions and 0 deletions
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1
math/Makefile
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@ -91,6 +91,7 @@
SUBDIR += R-cran-units
SUBDIR += R-cran-xts
SUBDIR += R-cran-zoo
SUBDIR += SoPlex
SUBDIR += aamath
SUBDIR += abacus
SUBDIR += abakus

31
math/SoPlex/Makefile Normal file
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@ -0,0 +1,31 @@
# Created by: Yuri Victorovich <yuri@FreeBSD.org>
# $FreeBSD$
PORTNAME= SoPlex
DISTVERSION= 3.0.1
CATEGORIES= math science
MASTER_SITES= http://soplex.zib.de/download/release/
DISTNAME= ${PORTNAME:tl}-${DISTVERSION}
MAINTAINER= yuri@FreeBSD.org
COMMENT= Optimization package for solving linear programming problems (LPs)
LICENSE= ZIB
LICENSE_NAME= ZIB ACADEMIC LICENSE
LICENSE_FILE= ${WRKSRC}/COPYING
LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
LIB_DEPENDS= libgmp.so:math/gmp
USES= cmake:outsource,noninja tar:tgz
USE_LDCONFIG= yes
PLIST_SUB= SHL4=${DISTVERSION}.0 SHL2=${DISTVERSION:R}
.include <bsd.port.pre.mk>
.if ${OPSYS} == FreeBSD && ${OSVERSION} < 1100000
CMAKE_ARGS= -DFREEBSD_NO_CXX_THREAD_LOCAL_BUG224581:BOOL=ON # https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=224581
# This also necessitates noninja above for some reason
.endif
.include <bsd.port.post.mk>

3
math/SoPlex/distinfo Normal file
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@ -0,0 +1,3 @@
TIMESTAMP = 1514183609
SHA256 (soplex-3.0.1.tgz) = f97a6be9f890f723c046ac21b80d8781ee6155e49e0e6ae90d151d44a23b8676
SIZE (soplex-3.0.1.tgz) = 1343714

71
math/SoPlex/files/patch-CMakeLists.txt Normal file
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@ -0,0 +1,71 @@
--- CMakeLists.txt.orig 2017-09-04 15:12:27 UTC
+++ CMakeLists.txt
@@ -45,33 +45,33 @@ set(CMAKE_MACOSX_RPATH ON)
set(CMAKE_CXX_STANDARD 11)
# create target to update the githash
-file(WRITE ${CMAKE_BINARY_DIR}/soplex_update_githash.cmake "
-find_program(GIT git)
-if(GIT)
- execute_process(
- COMMAND \${GIT} describe --always --dirty
- WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}
- OUTPUT_VARIABLE GITHASH OUTPUT_STRIP_TRAILING_WHITESPACE)
- if(GITHASH STREQUAL \"\")
- set(GITHASH \"------\")
- endif()
- string(REGEX REPLACE \"^.*-g\" \"\" GITHASH \${GITHASH})
-else()
- set(GITHASH \"------\")
-endif()
-if(GITHASH STREQUAL \"------\")
- # read stored hash from file
- file(STRINGS \${DST} GITHASH)
- string(REGEX REPLACE \"#define SPX_GITHASH \" \"\" GITHASH \${GITHASH})
-else()
- file(WRITE \${DST} \"#define SPX_GITHASH \\\"\${GITHASH}\\\"\")
-endif()
-message(STATUS \"Git hash: \" \${GITHASH})
-")
+#file(WRITE ${CMAKE_BINARY_DIR}/soplex_update_githash.cmake "
+#find_program(GIT git)
+#if(GIT)
+# execute_process(
+# COMMAND \${GIT} describe --always --dirty
+# WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}
+# OUTPUT_VARIABLE GITHASH OUTPUT_STRIP_TRAILING_WHITESPACE)
+# if(GITHASH STREQUAL \"\")
+# set(GITHASH \"------\")
+# endif()
+# string(REGEX REPLACE \"^.*-g\" \"\" GITHASH \${GITHASH})
+#else()
+# set(GITHASH \"------\")
+#endif()
+#if(GITHASH STREQUAL \"------\")
+# # read stored hash from file
+# file(STRINGS \${DST} GITHASH)
+# string(REGEX REPLACE \"#define SPX_GITHASH \" \"\" GITHASH \${GITHASH})
+#else()
+# file(WRITE \${DST} \"#define SPX_GITHASH \\\"\${GITHASH}\\\"\")
+#endif()
+#message(STATUS \"Git hash: \" \${GITHASH})
+#")
# encode the current git hash into the binary
-add_custom_target(soplex_update_githash
- COMMAND ${CMAKE_COMMAND} -DDST=${PROJECT_SOURCE_DIR}/src/git_hash.cpp
- -P ${CMAKE_BINARY_DIR}/soplex_update_githash.cmake)
+#add_custom_target(soplex_update_githash
+# COMMAND ${CMAKE_COMMAND} -DDST=${PROJECT_SOURCE_DIR}/src/git_hash.cpp
+# -P ${CMAKE_BINARY_DIR}/soplex_update_githash.cmake)
option(LEGACY "Build SoPlex in legacy mode" OFF)
if(CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
@@ -85,7 +85,7 @@ if(LEGACY)
add_definitions(-DTHREADLOCAL=)
endif()
-if(NOT "${CMAKE_CXX_COMPILE_FEATURES}" MATCHES "cxx_thread_local")
+if(NOT "${CMAKE_CXX_COMPILE_FEATURES}" MATCHES "cxx_thread_local" OR FREEBSD_NO_CXX_THREAD_LOCAL_BUG224581)
add_definitions(-DTHREADLOCAL=)
endif()

27
math/SoPlex/files/patch-src_CMakeLists.txt Normal file
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@ -0,0 +1,27 @@
--- src/CMakeLists.txt.orig 2017-09-04 15:08:47 UTC
+++ src/CMakeLists.txt
@@ -159,20 +159,20 @@ set(headers
wallclocktimer.h)
# create soplex library with pic
-add_library(libsoplex-pic STATIC ${sources})
+add_library(libsoplex-pic SHARED ${sources})
set_target_properties(libsoplex-pic PROPERTIES
POSITION_INDEPENDENT_CODE on
VERSION ${SOPLEX_VERSION_MAJOR}.${SOPLEX_VERSION_MINOR}.${SOPLEX_VERSION_PATCH}.${SOPLEX_VERSION_SUB}
SOVERSION ${SOPLEX_VERSION_MAJOR}.${SOPLEX_VERSION_MINOR})
-add_dependencies(libsoplex-pic soplex_update_githash)
+#add_dependencies(libsoplex-pic soplex_update_githash)
target_link_libraries(libsoplex-pic ${libs})
# create soplex library without pic
-add_library(libsoplex STATIC ${sources})
+add_library(libsoplex SHARED ${sources})
set_target_properties(libsoplex PROPERTIES
VERSION ${SOPLEX_VERSION_MAJOR}.${SOPLEX_VERSION_MINOR}.${SOPLEX_VERSION_PATCH}.${SOPLEX_VERSION_SUB}
SOVERSION ${SOPLEX_VERSION_MAJOR}.${SOPLEX_VERSION_MINOR})
-add_dependencies(libsoplex soplex_update_githash)
+#add_dependencies(libsoplex soplex_update_githash)
target_link_libraries(libsoplex ${libs})
# create soplex binary using library without pic

18
math/SoPlex/pkg-descr Normal file
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@ -0,0 +1,18 @@
SoPlex is an optimization package for solving linear programming problems (LPs)
based on an advanced implementation of the primal and dual revised simplex
algorithm. It provides special support for the exact solution of LPs with
rational input data. It can be used as a standalone solver reading MPS or LP
format files via a command line interface as well as embedded into other
programs via a C++ class library. The main features of SoPlex are:
* presolving, scaling, exploitation of sparsity, hot-starting from any regular
basis
* column- and row-oriented form of the simplex algorithm
* an object-oriented software design written in C++
* a compile-time option to use 80bit extended ("quad") precision for numerically
difficult LPs
* an LP iterative refinement procedure to compute high-precision solution
* routines for an exact rational LU factorization and continued fraction
approximations in order to compute exact solutions.
WWW: http://soplex.zib.de

104
math/SoPlex/pkg-plist Normal file
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@ -0,0 +1,104 @@
bin/soplex
include/array.h
include/basevectors.h
include/classarray.h
include/clufactor.h
include/clufactor_rational.h
include/cring.h
include/dataarray.h
include/datahashtable.h
include/datakey.h
include/dataset.h
include/didxset.h
include/dsvector.h
include/dsvectorbase.h
include/dvector.h
include/dvectorbase.h
include/exceptions.h
include/gzstream.h
include/idlist.h
include/idxset.h
include/islist.h
include/lpcol.h
include/lpcolbase.h
include/lpcolset.h
include/lpcolsetbase.h
include/lprow.h
include/lprowbase.h
include/lprowset.h
include/lprowsetbase.h
include/mpsinput.h
include/nameset.h
include/notimer.h
include/random.h
include/rational.h
include/ratrecon.h
include/slinsolver.h
include/slinsolver_rational.h
include/slufactor.h
include/slufactor_rational.h
include/sol.h
include/solbase.h
include/soplex.h
include/soplexlegacy.h
include/sorter.h
include/spxalloc.h
include/spxautopr.h
include/spxbasis.h
include/spxboundflippingrt.h
include/spxdantzigpr.h
include/spxdefaultrt.h
include/spxdefines.h
include/spxdevexpr.h
include/spxequilisc.h
include/spxfastrt.h
include/spxfileio.h
include/spxgeometsc.h
include/spxgithash.h
include/spxharrisrt.h
include/spxhybridpr.h
include/spxid.h
include/spxleastsqsc.h
include/spxlp.h
include/spxlpbase.h
include/spxmainsm.h
include/spxout.h
include/spxparmultpr.h
include/spxpricer.h
include/spxratiotester.h
include/spxscaler.h
include/spxsimplifier.h
include/spxsolver.h
include/spxstarter.h
include/spxsteepexpr.h
include/spxsteeppr.h
include/spxsumst.h
include/spxvectorst.h
include/spxweightpr.h
include/spxweightst.h
include/ssvector.h
include/ssvectorbase.h
include/statistics.h
include/svector.h
include/svectorbase.h
include/svset.h
include/svsetbase.h
include/timer.h
include/timerfactory.h
include/unitvector.h
include/unitvectorbase.h
include/updatevector.h
include/usertimer.h
include/validation.h
include/vector.h
include/vectorbase.h
include/wallclocktimer.h
lib/cmake/soplex/soplex-config.cmake
lib/cmake/soplex/soplex-targets-%%CMAKE_BUILD_TYPE%%.cmake
lib/cmake/soplex/soplex-targets.cmake
lib/libsoplex-pic.so
lib/libsoplex-pic.so.%%SHL2%%
lib/libsoplex-pic.so.%%SHL4%%
lib/libsoplex.so
lib/libsoplex.so.%%SHL2%%
lib/libsoplex.so.%%SHL4%%