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Add py-tifffile 2020.10.1

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Tifffile is a Python library to
- store numpy arrays in TIFF (Tagged Image File Format) files, and
- read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
NIHImage, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS,
ZIF (Zoomable Image File Format), QPTIFF (QPI), NDPI, and GeoTIFF files.

Image data can be read as numpy arrays or zarr arrays/groups from strips, tiles,
pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Numpy arrays can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack
compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled,
predicted, or compressed form.

A subset of the TIFF specification is supported, mainly 8, 16, 32 and 64-bit
integer, 16, 32 and 64-bit float, grayscale and multi-sample images.
Specifically, CCITT and OJPEG compression, chroma subsampling without JPEG
compression, color space transformations, samples with differing types, or IPTC
and XMP metadata are not implemented.

WWW: https://github.com/cgohlke/tifffile
This commit is contained in:
Sunpoet Po-Chuan Hsieh 2020-10-10 07:43:48 +00:00
parent eb1f9c4dc2
commit 79453a591b
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=551860
4 changed files with 47 additions and 0 deletions
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1
graphics/Makefile
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@ -876,6 +876,7 @@
SUBDIR += py-svg.path
SUBDIR += py-svgwrite
SUBDIR += py-termtosvg
SUBDIR += py-tifffile
SUBDIR += py-toyplot
SUBDIR += py-traitsui
SUBDIR += py-vecrec

21
graphics/py-tifffile/Makefile Normal file
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@ -0,0 +1,21 @@
# Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org>
# $FreeBSD$
PORTNAME= tifffile
PORTVERSION= 2020.10.1
CATEGORIES= graphics python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Read and write TIFF(r) files
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE
USES= python:3.7+
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
.include <bsd.port.mk>

3
graphics/py-tifffile/distinfo Normal file
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@ -0,0 +1,3 @@
TIMESTAMP = 1601996442
SHA256 (tifffile-2020.10.1.tar.gz) = 799feeccc91965b69e1288c51a1d1118faec7f40b2eb89ad2979591b85324830
SIZE (tifffile-2020.10.1.tar.gz) = 224780

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graphics/py-tifffile/pkg-descr Normal file
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@ -0,0 +1,22 @@
Tifffile is a Python library to
- store numpy arrays in TIFF (Tagged Image File Format) files, and
- read image and metadata from TIFF-like files used in bioimaging.
Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
NIHImage, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS,
ZIF (Zoomable Image File Format), QPTIFF (QPI), NDPI, and GeoTIFF files.
Image data can be read as numpy arrays or zarr arrays/groups from strips, tiles,
pages (IFDs), SubIFDs, higher order series, and pyramidal levels.
Numpy arrays can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack
compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled,
predicted, or compressed form.
A subset of the TIFF specification is supported, mainly 8, 16, 32 and 64-bit
integer, 16, 32 and 64-bit float, grayscale and multi-sample images.
Specifically, CCITT and OJPEG compression, chroma subsampling without JPEG
compression, color space transformations, samples with differing types, or IPTC
and XMP metadata are not implemented.
WWW: https://github.com/cgohlke/tifffile