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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-19 00:13:33 +00:00

- fix location of pkgconfig data

- fix linker flags
- USE_LDCONFIG
- respect NOPORTEXAMPLES
- bump PORTREVISION

PR:		ports/130812
Submitted by:	bf <bf2006a@yahoo.com> (maintainer)
This commit is contained in:
Pav Lucistnik 2009-01-21 10:19:45 +00:00
parent 5255e57741
commit 87adcecff0
Notes: svn2git 2021-03-31 03:12:20 +00:00
svn path=/head/; revision=226593
2 changed files with 345 additions and 337 deletions

View File

@ -8,6 +8,7 @@
PORTNAME= jags
PORTVERSION= 1.0.3
PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= http://www-fis.iarc.fr/~martyn/software/jags/
DISTNAME= ${PORTNAME:U}-${PORTVERSION}
@ -33,14 +34,21 @@ CONFIGURE_ARGS= --with-lapack=-llapack --with-blas=-lblas
DIST_SUBDIR= ${PORTNAME}
GNU_CONFIGURE= yes
CONFIGURE_ENV= LDFLAGS=-L${PREFIX}/lib
CONFIGURE_ENV= LDFLAGS=-L${LOCALBASE}/lib
USE_FORTRAN= yes
USE_LDCONFIG= yes
post-patch:
${REINPLACE_CMD} -e 's|[(]libdir[)]/pkgconfig|(prefix)/libdata/pkgconfig|g' \
${WRKSRC}/etc/Makefile.in
post-install:
.if !defined(NOPORTDOCS)
${MKDIR} ${DOCSDIR}
${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/jags_user_manual.pdf \
${DOCSDIR}
.endif
.if !defined(NOPORTEXAMPLES)
${MKDIR} ${EXAMPLESDIR}
( cd ${EXAMPLESDIR}; \
${PAX} -rzf ${DISTDIR}/${DIST_SUBDIR}/classic-bugs.tar.gz \

View File

@ -70,344 +70,344 @@ lib/libjags.so.1
lib/libjrmath.la
lib/libjrmath.so
lib/libjrmath.so.0
lib/pkgconfig/jags.pc
libdata/pkgconfig/jags.pc
libexec/jags-terminal
%%PORTDOCS%%%%DOCSDIR%%/jags_user_manual.pdf
%%PORTDOCS%%%%EXAMPLESDIR%%/R/Rcheck.R
%%PORTDOCS%%%%EXAMPLESDIR%%/R/bench.R
%%PORTDOCS%%%%EXAMPLESDIR%%/R/check.R
%%PORTDOCS%%%%EXAMPLESDIR%%/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/Makefile
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/bench-test3.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blocker-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blocker-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blocker.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blockert-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blockert.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blockht-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/blockht.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/notest2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/notest3.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/blocker/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/bones-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/bones-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/bones.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/bones/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/dyes-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/dyes-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/dyes.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/dyes/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/BT-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/bench.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/epil-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/epil-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/epil2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/epil3.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/make-BT.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/notest1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/epil/notest2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/equiv-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/equiv-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/equiv.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/equivmiss-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/equiv/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/inhaler/inhaler-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/inhaler/inhaler-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/inhaler/inhaler.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/inhaler/inhaler.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/inhaler/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/bench.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/kidney-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/kidney-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/kidney.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/kidney/notest1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk-poisson.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk-s.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leuk.in
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leukfr-s.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leukfr.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leukfr.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/leukfr.in
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/leuk/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/line-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/line-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/line.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/line/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/litters-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/litters-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/litters.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/litters/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat2-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/lsat2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/lsat/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/mice-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/mice-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/mice.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/mice/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/oxford-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/oxford-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/oxford.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/oxford.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/oxford/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/pump-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/pump-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/pump.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/pump/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/rats-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/rats-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/rats.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/ratsmiss-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/rats/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/salm-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/salm-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/salm-pareto.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/salm.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/salm/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/bench-test3.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/bench-test4.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/bench-test5.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/notest1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seeds-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seeds-init.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seeds.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seedspar.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seedssig.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seedsuni.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/seedszro.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/test3.R
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/test5.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol1/seeds/test5.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/Makefile
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/ReadMe
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/air-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/air.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/bench.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/air/notest1.cmd
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/alli/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/alli/test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/alli/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/asia-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/asia.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/asia2-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/asia2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/asia/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/beetles-cloglog.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/beetles-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/beetles-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/beetles-logit.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/beetles-probit.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/bench-test3.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/beetles/test3.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/biops-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/biops-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/biops.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/biops/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/bench-test3.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/bench-test4.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats1.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats3.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/birats4.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/test3.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/birats/test4.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/cervix/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/cervix/cervix-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/cervix/cervix-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/cervix/cervix.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/cervix/test1.cmd
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/dugongs/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/eyes-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/eyes-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/eyes.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/eyes.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/eyes2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/eyes/notest1.cmd
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/hearts/hearts-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/hearts/hearts.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/hearts/hearts.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/hearts/test1.cmd
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/bench.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/ice-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/ice-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/icear.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/ice/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/ReadMe
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/bench-test2.R
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/jaw-constant.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/jaw-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/jaw-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/jaw-linear.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/jaw-quadratic.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/jaw/test3.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/bench-test2.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/mvotree-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/mvotree-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/mvotree.bug
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/orange-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/otree.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/otree.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/otree.in
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/orange/test2.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/pigs/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/pigs/pigs-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/pigs/pigs-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/pigs/pigs.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/pigs/test1.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/bench-test1.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/schools-data.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/schools-inits.R
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/schools.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/schools.dat
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/test.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/schools/test1.cmd
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits1.R
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits3.R
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%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant2.bug
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/test3.cmd
%%PORTDOCS%%%%EXAMPLESDIR%%/vol2/stagnant/test4.cmd
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/stagnant
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/schools
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/pigs
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/orange
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/jaw
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/ice
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/hearts
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/eyes
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/dugongs
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/cervix
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/birats
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/biops
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/beetles
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/asia
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/alli
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2/air
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol2
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/seeds
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/salm
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%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/oxford
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/mice
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/lsat
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%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/line
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/leuk
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/kidney
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/inhaler
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%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/bones
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/vol1/blocker
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%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/R
%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/bench-test1.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs-data.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs-inits.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs.bug
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/test1.cmd
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/bench-test1.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools-data.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools-inits.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools.bug
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools.dat
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/test.bug
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/test1.cmd
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/ReadMe
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/bench-test3.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/bench-test4.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/notest1.cmd
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/notest2.cmd
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-data.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits1.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits2.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits3.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits4.R
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant.bug
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant2.bug
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/test3.cmd
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/test4.cmd
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/stagnant
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/schools
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/pigs
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/orange
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/jaw
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/ice
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/hearts
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/eyes
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/dugongs
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/cervix
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/birats
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/biops
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/beetles
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/asia
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/alli
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/air
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/seeds
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/salm
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/rats
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/pump
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/oxford
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/mice
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/lsat
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/litters
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/line
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/leuk
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/kidney
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/inhaler
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/equiv
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/epil
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/dyes
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/bones
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/blocker
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/R
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%
%%PORTDOCS%%@dirrm %%DOCSDIR%%
@dirrm lib/JAGS/modules
@dirrm lib/JAGS