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biology/abyss: Update 2.2.5 -> 2.3.0-3

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This commit is contained in:
Yuri Victorovich 2021-04-18 13:12:46 -07:00
parent 3484bcc34a
commit 8e65beb783
3 changed files with 11 additions and 6 deletions
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10
biology/abyss/Makefile
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@ -1,5 +1,6 @@
PORTNAME= abyss
DISTVERSION= 2.2.5
DISTVERSION= 2.3.0-3
DISTVERSIONSUFFIX= -g25f5f66f
CATEGORIES= biology
MAINTAINER= yuri@FreeBSD.org
@ -19,12 +20,15 @@ RUN_DEPENDS= bash:shells/bash \
gmake:devel/gmake
USES= autoreconf compiler:c++11-lang gmake iconv:wchar_t localbase:ldflags shebangfix sqlite
USE_GITHUB= yes
GH_ACCOUNT= bcgsc
SHEBANG_FILES= bin/${PORTNAME}-* DataBase/abyss-db-txt
SHEBANG_LANG= make
make_OLD_CMD= /usr/bin/make
make_CMD= ${PREFIX}/bin/gmake
USE_GITHUB= yes
GH_ACCOUNT= bcgsc
GNU_CONFIGURE= yes
CONFIGURE_ARGS= --without-sparsehash # configure fails to find std::hash, reported to the ML: https://groups.google.com/forum/#!topic/trans-abyss/SZDBKR5bKxs

6
biology/abyss/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1601189184
SHA256 (bcgsc-abyss-2.2.5_GH0.tar.gz) = 1b85e1fdfb49f1ed4e00201cc55e9ccec93f812335104751bbf24b46e1264453
SIZE (bcgsc-abyss-2.2.5_GH0.tar.gz) = 1698962
TIMESTAMP = 1618769259
SHA256 (bcgsc-abyss-2.3.0-3-g25f5f66f_GH0.tar.gz) = 6345363ad02480f019816eb02ee80a8683ef32415ff756f48c89b02d0c38f8e3
SIZE (bcgsc-abyss-2.3.0-3-g25f5f66f_GH0.tar.gz) = 1531834

1
biology/abyss/pkg-plist
View File

@ -44,6 +44,7 @@ bin/abyss-mergepairs
bin/abyss-overlap
bin/abyss-paired-dbg
bin/abyss-pe
bin/abyss-rresolver-short
bin/abyss-samtoafg
bin/abyss-scaffold
bin/abyss-sealer