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Change CONFIGURE_ENV --> USE_CSTD. [1]

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Add missing pkg-plist entry for Parsing.so. [2]

Change RUN_DEPENDS --> LIB_DEPENDS for optional math/atlas dependency.

Submitted by:	[1] erwin
Reported by:	[2] QAT
This commit is contained in:
Jason Evans 2009-06-10 01:25:02 +00:00
parent c1d5689da2
commit 91fb724efd
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=235516
2 changed files with 6 additions and 2 deletions
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7
biology/crux/Makefile
View File

@ -16,7 +16,7 @@ COMMENT= Software toolkit for phylogenetic inference
USE_BZIP2= yes
GNU_CONFIGURE= yes
CONFIGURE_ARGS=--with-python=${PYTHON_CMD} --disable-mpi
CONFIGURE_ENV+=EXTRA_CFLAGS="-std=gnu99"
USE_CSTD= gnu99
USE_GMAKE= yes
USE_PYTHON= 2.5+
@ -25,8 +25,11 @@ OPTIONS= SYS_LINALG "Enable system ATLAS/LAPACK" Off
.include <bsd.port.pre.mk>
.if defined(WITH_SYS_LINALG)
CPPFLAGS+= -I${LOCALBASE}/include
LDFLAGS+= -L${LOCALBASE}/lib
CONFIGURE_ARGS+= --enable-sys-linalg
RUN_DEPENDS+= libatlas:${PORTSDIR}/math/atlas
CONFIGURE_ENV+= CPPFLAGS="${CPPFLAGS}" LDFLAGS="${LDFLAGS}"
LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas
.else
CONFIGURE_ARGS+= --disable-sys-linalg
USE_FORTRAN= yes

1
biology/crux/pkg-plist
View File

@ -51,6 +51,7 @@ bin/MrRogers
%%PYTHON_SITELIBDIR%%/Crux/include/Crux/libm.pxd
%%PYTHON_SITELIBDIR%%/Crux/include/Crux/libc.pxd
%%PYTHON_SITELIBDIR%%/Crux/include/Parsing.pxd
%%PYTHON_SITELIBDIR%%/Parsing.so
share/Crux/lib/libCx.so
share/Crux/parsers/Fasta.log
share/Crux/parsers/Fasta.pickle