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biology/gemma: Upgrade to 0.98.3

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Minor bug fixes and enhancements

Reported by:    portscout
This commit is contained in:
Jason W. Bacon 2021-01-02 22:05:58 +00:00
parent 667246c1a7
commit ad36c9cb17
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=559975
3 changed files with 4 additions and 20 deletions
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3
biology/gemma/Makefile
View File

@ -1,8 +1,7 @@
# $FreeBSD$
PORTNAME= gemma
DISTVERSION= 0.98.1
PORTREVISION= 6
DISTVERSION= 0.98.3
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org

6
biology/gemma/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1558018021
SHA256 (genetics-statistics-GEMMA-0.98.1_GH0.tar.gz) = 6beeed4a9e727a96fdea9e86e39bbe9cbc9f0540ad3a1053814e95b0863a7e6b
SIZE (genetics-statistics-GEMMA-0.98.1_GH0.tar.gz) = 49569015
TIMESTAMP = 1609514940
SHA256 (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 8c27874634269f52a194a41048e70c17e2128563f56bb8ef59338a93147c61ba
SIZE (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 49572695

15
biology/gemma/files/patch-src_fastopenblas.h
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@ -1,15 +0,0 @@
--- src/fastopenblas.h.orig 2018-12-11 05:34:29 UTC
+++ src/fastopenblas.h
@@ -23,10 +23,12 @@
#include <assert.h>
#include <iostream>
+/* Conflicts with gsl_cblas.h, included from gsl_matrix.h
extern "C"
{
#include <cblas.h> // For OpenBlas / Atlas
}
+*/
#include "gsl/gsl_matrix.h"
void fast_cblas_dgemm(const enum CBLAS_ORDER Order,