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math/dionysus: New port: Library for computing persistent homology

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This commit is contained in:
Yuri Victorovich 2022-02-02 01:31:00 -08:00
parent 4f1c4e6ff2
commit bd4686706c
5 changed files with 72 additions and 0 deletions
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1
math/Makefile
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@ -240,6 +240,7 @@
SUBDIR += dbcsr
SUBDIR += deal.ii
SUBDIR += dieharder
SUBDIR += dionysus
SUBDIR += disco
SUBDIR += djbfft
SUBDIR += drgeo

29
math/dionysus/Makefile Normal file
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@ -0,0 +1,29 @@
PORTNAME= dionysus
PORTVERSION= g20210521
CATEGORIES= math
PKGNAMESUFFIX= -topology-library
MAINTAINER= yuri@FreeBSD.org
COMMENT= Library for computing persistent homology
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
BUILD_DEPENDS= ${LOCALBASE}/include/boost/range/adaptors.hpp:devel/boost-libs
RUN_DEPENDS= ${LOCALBASE}/include/boost/range/adaptors.hpp:devel/boost-libs
USES= cmake
USE_GITHUB= yes
GH_ACCOUNT= mrzv
GH_TAGNAME= ae27bb1
CMAKE_OFF= build_examples build_python_bindings
NO_BUILD= yes
NO_ARCH= yes
do-install:
cd ${WRKSRC}/include && ${COPYTREE_SHARE} ${PORTNAME} ${STAGEDIR}${PREFIX}/include
.include <bsd.port.mk>

3
math/dionysus/distinfo Normal file
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@ -0,0 +1,3 @@
TIMESTAMP = 1643774964
SHA256 (mrzv-dionysus-g20210521-ae27bb1_GH0.tar.gz) = 36940e1f094115fc3f23e70a03e8a4c68352a602f9133540b10e04117391be2f
SIZE (mrzv-dionysus-g20210521-ae27bb1_GH0.tar.gz) = 1226395

4
math/dionysus/pkg-descr Normal file
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@ -0,0 +1,4 @@
Dionysus is a computational topology package focused on persistent
homology. It is written in C++, with Python bindings.
WWW: https://mrzv.org/software/dionysus2/

35
math/dionysus/pkg-plist Normal file
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@ -0,0 +1,35 @@
include/dionysus/chain.h
include/dionysus/chain.hpp
include/dionysus/clearing-reduction.h
include/dionysus/clearing-reduction.hpp
include/dionysus/cohomology-persistence.h
include/dionysus/cohomology-persistence.hpp
include/dionysus/diagram.h
include/dionysus/distances.h
include/dionysus/distances.hpp
include/dionysus/dlog/progress.h
include/dionysus/fields/q.h
include/dionysus/fields/z2.h
include/dionysus/fields/zp.h
include/dionysus/filtration.h
include/dionysus/omni-field-persistence.h
include/dionysus/omni-field-persistence.hpp
include/dionysus/ordinary-persistence.h
include/dionysus/pair-recorder.h
include/dionysus/reduced-matrix.h
include/dionysus/reduced-matrix.hpp
include/dionysus/reduction.h
include/dionysus/relative-homology-zigzag.h
include/dionysus/relative-homology-zigzag.hpp
include/dionysus/rips.h
include/dionysus/rips.hpp
include/dionysus/row-reduction.h
include/dionysus/row-reduction.hpp
include/dionysus/simplex.h
include/dionysus/sparse-row-matrix.h
include/dionysus/sparse-row-matrix.hpp
include/dionysus/standard-reduction.h
include/dionysus/standard-reduction.hpp
include/dionysus/trails-chains.h
include/dionysus/zigzag-persistence.h
include/dionysus/zigzag-persistence.hpp