mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-23 04:23:08 +00:00
- Update to 2.8.1
PR: 128057 Submitted by: Christian Sturm <athaba at inode dot at>
This commit is contained in:
Dmitry Marakasov
parent
97f2dd1298
commit
c3fd0b3811
Notes:
svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=221933
@ -6,47 +6,32 @@
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#
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PORTNAME= avida
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PORTVERSION= 2.4.3
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PORTVERSION= 2.8.1
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CATEGORIES= biology
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MASTER_SITES= ${MASTER_SITE_SOURCEFORGE}
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MASTER_SITE_SUBDIR= ${PORTNAME}
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DISTNAME= ${PORTNAME}-src-${PORTVERSION}
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MASTER_SITES= SF
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DISTNAME= ${PORTNAME}-${PORTVERSION}-src
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MAINTAINER= ports@FreeBSD.org
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COMMENT= Avida is an auto-adaptive genetic system designed for ALife research
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BUILD_DEPENDS= cmake:${PORTSDIR}/devel/cmake
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USE_CMAKE= yes
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USE_GCC= 4.2+
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CMAKE_ARGS= -DPROJECT_BINARY_DIR=${WRKSRC}/build/work \
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-DAVD_CONSISTENCY_TEST_PRIMITIVE:BOOL=OFF \
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-DAVD_GUI_NCURSES:BOOL=ON \
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-DAVD_PRIMITIVE:BOOL=ON \
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-DAVD_UNIT_TESTS:BOOL=OFF\
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-DCMAKE_BUILD_TYPE:STRING=Release
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WRKSRC= ${WRKDIR}/${PORTNAME}-src-${PORTVERSION}
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WRKSRC= ${WRKDIR}/${PORTNAME}
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PORTDOCS= *
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do-build:
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@(cd ${BUILD_WRKSRC}; \
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${MKDIR} build build/work; \
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cd build; \
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cmake ${CMAKE_ARGS} ..; \
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${MAKE})
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do-install:
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@(cd ${BUILD_WRKSRC}; \
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cd build; \
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${MAKE} install)
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post-extract:
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@${RM} -f ${WRKSRC}/documentation/.[D_]*
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post-install:
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${MKDIR} ${PREFIX}/share/${PORTNAME}
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(cd ${WRKSRC}/build/work/work; \
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${INSTALL_PROGRAM} AvidaConsole ${PREFIX}/bin; \
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${INSTALL_PROGRAM} task_event_gen ${PREFIX}/bin; \
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${INSTALL_DATA} analyze.cfg environment.cfg events.cfg genesis genesis.4stack inst_set.4stack inst_set.default organism.default ${PREFIX}/share/${PORTNAME} )
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${INSTALL_PROGRAM} ${WRKSRC}/work/avida ${PREFIX}/bin
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${INSTALL_PROGRAM} ${WRKSRC}/work/avida-viewer ${PREFIX}/bin
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${MKDIR} ${DATADIR}
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${INSTALL_DATA} ${WRKSRC}/work/*.cfg ${WRKSRC}/work/*.org ${DATADIR}
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.if !defined(NOPORTDOCS)
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${MKDIR} ${DOCSDIR}
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(${CP} -RP ${WRKSRC}/documentation/ ${DOCSDIR})
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cd ${WRKSRC}/documentation && ${COPYTREE_SHARE} . ${DOCSDIR}
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.endif
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.include <bsd.port.mk>
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@ -1,3 +1,3 @@
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MD5 (avida-src-2.4.3.tar.gz) = 44c3f1df0fe5d62a08cb0a64dc9c5ac2
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SHA256 (avida-src-2.4.3.tar.gz) = 4a883138d9da57c99defe521de96e7851f453e1a003c978a6dbb178c8a51ba11
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SIZE (avida-src-2.4.3.tar.gz) = 1725948
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MD5 (avida-2.8.1-src.tar.gz) = 99d9405921a23df1813e34c96106cd47
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SHA256 (avida-2.8.1-src.tar.gz) = 554a82081f550e49f795ecda34d6e19a91239e8dc500b6590f46d08839179ef7
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SIZE (avida-2.8.1-src.tar.gz) = 1609168
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12
biology/avida/files/patch-source-main-cTaskLib.cc
Normal file
12
biology/avida/files/patch-source-main-cTaskLib.cc
Normal file
@ -0,0 +1,12 @@
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--- source/main/cTaskLib.cc.orig 2007-09-05 23:53:07.000000000 +0400
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+++ source/main/cTaskLib.cc 2008-10-13 19:32:10.000000000 +0400
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@@ -41,8 +41,8 @@
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// Various workarounds for Visual Studio shortcomings
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#if AVIDA_PLATFORM(WINDOWS)
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# define llabs(x) _abs64(x)
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-# define log2(x) (log(x)/log(2.0))
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#endif
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+# define log2(x) (log(x)/log(2.0))
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static const double dCastPrecision = 100000.0;
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@ -1,122 +1,15 @@
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bin/AvidaConsole
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bin/task_event_gen
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bin/avida
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bin/avida-viewer
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%%DATADIR%%/analyze.cfg
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%%DATADIR%%/avida.cfg
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%%DATADIR%%/default-classic.org
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%%DATADIR%%/default-sex-classic.org
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%%DATADIR%%/default-smt.org
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%%DATADIR%%/default-transsmt.org
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%%DATADIR%%/environment.cfg
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%%DATADIR%%/events.cfg
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%%DATADIR%%/genesis
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%%DATADIR%%/genesis.4stack
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%%DATADIR%%/inst_set.4stack
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%%DATADIR%%/inst_set.default
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%%DATADIR%%/organism.default
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%%PORTDOCS%%%%DOCSDIR%%/content/using/CMakeLists.txt
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%%PORTDOCS%%%%DOCSDIR%%/content/using/analyze_mode.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/analyze_samples.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_c++_intro.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_death_birth.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_environment.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_events.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_genesis.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_genome.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_init_file.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_instruction.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_life_cycle.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/code_task.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/cpu2.gif
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%%PORTDOCS%%%%DOCSDIR%%/content/using/cpu_tour.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/cvs.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/devel.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/environment.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/events.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/genesis.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/CMakeLists.txt
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/components.help
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Bitwise.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.CPU-cycle.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.CPU.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Complement-Template.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Genome.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Genotype.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Heads.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.IO.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Input-Output.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Instruction.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Logic.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Memory.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Mutation.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Nop-Head-Notation.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Nop-Register-Notation.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Organism.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Population.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Registers.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Stack.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Tasks.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.Template.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.add.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.dec.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.h-alloc.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.h-copy.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.h-divide.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.h-search.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.if-label.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.if-less.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.if-n-equ.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.inc.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.jmp-head.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.mov-head.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.nand.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.nop-instructions.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.pop.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.push.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.set-flow.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.shift-l.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.shift-r.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.sub.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.swap-stk.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/help.swap.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/inst.help
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/notations.help
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%%PORTDOCS%%%%DOCSDIR%%/content/using/glossary/todo.help
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%%PORTDOCS%%%%DOCSDIR%%/content/using/index.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/inst_set.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/level_map.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/print_data.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/screen.html
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%%PORTDOCS%%%%DOCSDIR%%/content/using/structure.html
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%%PORTDOCS%%%%DOCSDIR%%/forrest/README.txt
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%%PORTDOCS%%%%DOCSDIR%%/forrest/classes/CatalogManager.properties
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%%PORTDOCS%%%%DOCSDIR%%/forrest/skinconf.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/langcode.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/languages_en.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/languages_es.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_af.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_de.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_es.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_it.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_no.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_ru.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/menu_sk.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/tabs.xml
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%%PORTDOCS%%%%DOCSDIR%%/forrest/translations/tabs_es.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/admin/index.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/admin/third-party-osx.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/admin/third-party-win32.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/images/group-logo.gif
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/images/group.svg
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/images/icon.png
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/images/project-logo.gif
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/images/project.svg
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/index.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/site.xml
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%%PORTDOCS%%%%DOCSDIR%%/xdocs/tabs.xml
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/xdocs/images
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/xdocs/admin
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/xdocs
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/forrest/translations
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/forrest/classes
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/forrest
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/content/using/glossary
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/content/using
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%%PORTDOCS%%@dirrm %%DOCSDIR%%/content
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%%PORTDOCS%%@dirrm %%DOCSDIR%%
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%%DATADIR%%/instset-classic.cfg
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%%DATADIR%%/instset-sex-classic.cfg
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%%DATADIR%%/instset-smt.cfg
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%%DATADIR%%/instset-transsmt.cfg
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@dirrm %%DATADIR%%
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