1
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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-24 00:45:52 +00:00

2009-05-31 biology/p5-bioperl-devel: no longer under development

2009-05-31 biology/p5-bioperl-run-devel: no longer under development
2009-06-01 net-p2p/deluge05: use net-p2p/deluge instead
2009-06-03 textproc/gmat: failed to build for a long time, no maintainer and apparently no users either
This commit is contained in:
Martin Wilke 2009-06-05 20:38:36 +00:00
parent 178818ef96
commit f128ddfb8e
Notes: svn2git 2021-03-31 03:12:20 +00:00
svn path=/head/; revision=235227
30 changed files with 4 additions and 5174 deletions

4
MOVED
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@ -3970,3 +3970,7 @@ japanese/mplusfonts|japanese/font-mplus|2009-05-30|Renamed
japanese/vlgothic|japanese/font-vlgothic|2009-05-30|Renamed
japanese/shinonome|japanese/font-shinonome|2009-05-30|Renamed
net/tftp-hpa|ftp/tftp-hpa|2009-05-31|Duplicate port
biology/p5-bioperl-devel||2009-06-05|Has expired: no longer under development
biology/p5-bioperl-run-devel||2009-06-05|Has expired: no longer under development
net-p2p/deluge05||2009-06-05|Has expired: use net-p2p/deluge instead
textproc/gmat||2009-06-05|Has expired: failed to build for a long time, no maintainer and apparently no users either

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@ -62,9 +62,7 @@
SUBDIR += p5-Bio-Graphics
SUBDIR += p5-Bio-Phylo
SUBDIR += p5-bioperl
SUBDIR += p5-bioperl-devel
SUBDIR += p5-bioperl-run
SUBDIR += p5-bioperl-run-devel
SUBDIR += paml
SUBDIR += phd2fasta
SUBDIR += phrap

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@ -1,3 +0,0 @@
MD5 (bioperl-1.5.2_102.tar.gz) = 4890481c5beb33e129b65b922fb0c126
SHA256 (bioperl-1.5.2_102.tar.gz) = 277c74c785afc05ad1d9dbe938677639c33130487d15bdc4a7a10e033137bada
SIZE (bioperl-1.5.2_102.tar.gz) = 5919092

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@ -1,19 +0,0 @@
--- Build.PL.orig Wed Feb 14 05:37:47 2007
+++ Build.PL Sun Jun 15 02:24:07 2008
@@ -32,7 +32,6 @@
'Test::More' => 0,
'Module::Build' => 0.2805,
'Test::Harness' => 2.62,
- 'CPAN' => 1.81
},
recommends => { # does what you would expect of recommends, except more informative output and generates optional_features in META.yml
'Ace' => '0/access of ACeDB database/Bio::DB::Ace,Bio::DB::GFF::Adaptor::ace',
@@ -174,7 +173,7 @@
}
sub prompt_for_biodbgff {
- my $proceed = $build->y_n("Do you want to run the BioDBGFF live database tests? y/n", 'n');
+ my $proceed = undef; # $build->y_n("Do you want to run the BioDBGFF live database tests? y/n", 'n');
if ($proceed) {
my @driver_choices;

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@ -1,20 +0,0 @@
--- ModuleBuildBioperl.pm.orig 2007-02-14 05:37:47.000000000 -0600
+++ ModuleBuildBioperl.pm 2008-10-17 23:16:52.000000000 -0500
@@ -93,7 +93,7 @@
closedir($scripts_dir);
my $question = $int_ok ? "Install [a]ll Bioperl scripts, [n]one, or choose groups [i]nteractively?" : "Install [a]ll Bioperl scripts or [n]one?";
- my $prompt = $self->prompt($question, 'a');
+ my $prompt = 'a'; # $self->prompt($question, 'a');
if ($prompt =~ /^[aA]/) {
$self->log_info(" - will install all scripts\n");
@@ -328,7 +328,7 @@
$status->{message} .= "\n (wanted for $why, used by $by_what)";
- my $installed = $self->install_optional($modname, $preferred_version, $status->{message});
+ my $installed = 'skip'; # $self->install_optional($modname, $preferred_version, $status->{message});
next if $installed eq 'ok';
$status->{message} = $installed unless $installed eq 'skip';
}

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@ -1,11 +0,0 @@
The Bioperl Project is an international association of developers of open
source Perl tools for bioinformatics, genomics and life science research.
Bioperl is a collection of object-oriented Perl modules created by the
Bioperl Project. It forms the basis of a large number of bioinformatics and
genomics applications.
(For an interesting aside on "How Perl saved the Human Genome Project", see
http://bioperl.org/GetStarted/tpj_ls_bio.html)
WWW: http://bioperl.org/

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@ -1,392 +0,0 @@
# New ports collection makefile for: p5-bioperl-run-devel
# Date created: 21 February 2006
# Whom: Mauricio Herrera Cuadra <mauricio@arareko.net>
#
# $FreeBSD$
#
PORTNAME= bioperl-run
PORTVERSION= 1.5.1
PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= http://bioperl.org/DIST/
PKGNAMEPREFIX= p5-
MAINTAINER= mauricio@arareko.net
COMMENT= Wrapper modules for common bioinformatics tools (developer release)
BUILD_DEPENDS= p5-bioperl=1.5.1_1:${PORTSDIR}/biology/p5-bioperl-devel \
${SITE_PERL}/Algorithm/Diff.pm:${PORTSDIR}/devel/p5-Algorithm-Diff
RUN_DEPENDS= ${BUILD_DEPENDS}
BROKEN= this port needs dependency update to p5-bioperl=1.5.2 and Build.PL mechanism
CONFLICTS= p5-bioperl-run-1.[02468]*
LATEST_LINK= p5-bioperl-run-devel
DEPRECATED= no longer under development
EXPIRATION_DATE= 2009-05-31
PERL_CONFIGURE= YES
MAN3= Bio::Factory::EMBOSS.3 \
Bio::Installer::Clustalw.3 \
Bio::Installer::EMBOSS.3 \
Bio::Installer::Generic.3 \
Bio::Installer::PAML.3 \
Bio::Installer::Probcons.3 \
Bio::Installer::TCoffee.3 \
Bio::Tools::Run::AbstractRunner.3 \
Bio::Tools::Run::Alignment::Blat.3 \
Bio::Tools::Run::Alignment::Clustalw.3 \
Bio::Tools::Run::Alignment::DBA.3 \
Bio::Tools::Run::Alignment::Exonerate.3 \
Bio::Tools::Run::Alignment::Lagan.3 \
Bio::Tools::Run::Alignment::MAFFT.3 \
Bio::Tools::Run::Alignment::Muscle.3 \
Bio::Tools::Run::Alignment::Probcons.3 \
Bio::Tools::Run::Alignment::Sim4.3 \
Bio::Tools::Run::Alignment::StandAloneFasta.3 \
Bio::Tools::Run::Alignment::TCoffee.3 \
Bio::Tools::Run::Analysis.3 \
Bio::Tools::Run::Analysis::soap.3 \
Bio::Tools::Run::AnalysisFactory.3 \
Bio::Tools::Run::AnalysisFactory::Pise.3 \
Bio::Tools::Run::AnalysisFactory::soap.3 \
Bio::Tools::Run::Coil.3 \
Bio::Tools::Run::EMBOSSApplication.3 \
Bio::Tools::Run::EMBOSSacd.3 \
Bio::Tools::Run::Eponine.3 \
Bio::Tools::Run::FootPrinter.3 \
Bio::Tools::Run::Genewise.3 \
Bio::Tools::Run::Genscan.3 \
Bio::Tools::Run::Hmmer.3 \
Bio::Tools::Run::JavaRunner.3 \
Bio::Tools::Run::Mdust.3 \
Bio::Tools::Run::Phrap.3 \
Bio::Tools::Run::Phylo::Forester::SDI.3 \
Bio::Tools::Run::Phylo::LVB.3 \
Bio::Tools::Run::Phylo::Molphy::ProtML.3 \
Bio::Tools::Run::Phylo::PAML::Baseml.3 \
Bio::Tools::Run::Phylo::PAML::Codeml.3 \
Bio::Tools::Run::Phylo::PAML::Yn00.3 \
Bio::Tools::Run::Phylo::Phylip::Base.3 \
Bio::Tools::Run::Phylo::Phylip::Consense.3 \
Bio::Tools::Run::Phylo::Phylip::DrawGram.3 \
Bio::Tools::Run::Phylo::Phylip::DrawTree.3 \
Bio::Tools::Run::Phylo::Phylip::Neighbor.3 \
Bio::Tools::Run::Phylo::Phylip::PhylipConf.3 \
Bio::Tools::Run::Phylo::Phylip::ProtDist.3 \
Bio::Tools::Run::Phylo::Phylip::ProtPars.3 \
Bio::Tools::Run::Phylo::Phylip::SeqBoot.3 \
Bio::Tools::Run::PiseApplication.3 \
Bio::Tools::Run::PiseApplication::CSR.3 \
Bio::Tools::Run::PiseApplication::Puzzle.3 \
Bio::Tools::Run::PiseApplication::abiview.3 \
Bio::Tools::Run::PiseApplication::addquart.3 \
Bio::Tools::Run::PiseApplication::align2model.3 \
Bio::Tools::Run::PiseApplication::alistat.3 \
Bio::Tools::Run::PiseApplication::antigenic.3 \
Bio::Tools::Run::PiseApplication::assp.3 \
Bio::Tools::Run::PiseApplication::backtranseq.3 \
Bio::Tools::Run::PiseApplication::bambe.3 \
Bio::Tools::Run::PiseApplication::banana.3 \
Bio::Tools::Run::PiseApplication::bionj.3 \
Bio::Tools::Run::PiseApplication::biosed.3 \
Bio::Tools::Run::PiseApplication::bl2seq.3 \
Bio::Tools::Run::PiseApplication::blast2.3 \
Bio::Tools::Run::PiseApplication::blimps.3 \
Bio::Tools::Run::PiseApplication::blimps_block.3 \
Bio::Tools::Run::PiseApplication::blimps_matrix.3 \
Bio::Tools::Run::PiseApplication::boxshade.3 \
Bio::Tools::Run::PiseApplication::btwisted.3 \
Bio::Tools::Run::PiseApplication::cai.3 \
Bio::Tools::Run::PiseApplication::cap.3 \
Bio::Tools::Run::PiseApplication::cds.3 \
Bio::Tools::Run::PiseApplication::chaos.3 \
Bio::Tools::Run::PiseApplication::charge.3 \
Bio::Tools::Run::PiseApplication::checktrans.3 \
Bio::Tools::Run::PiseApplication::chips.3 \
Bio::Tools::Run::PiseApplication::cirdna.3 \
Bio::Tools::Run::PiseApplication::clique.3 \
Bio::Tools::Run::PiseApplication::clustalw.3 \
Bio::Tools::Run::PiseApplication::clustalw_convert.3 \
Bio::Tools::Run::PiseApplication::codcmp.3 \
Bio::Tools::Run::PiseApplication::coderet.3 \
Bio::Tools::Run::PiseApplication::codnocod.3 \
Bio::Tools::Run::PiseApplication::codontree.3 \
Bio::Tools::Run::PiseApplication::codonw.3 \
Bio::Tools::Run::PiseApplication::comalign.3 \
Bio::Tools::Run::PiseApplication::combat.3 \
Bio::Tools::Run::PiseApplication::compseq.3 \
Bio::Tools::Run::PiseApplication::con_filter.3 \
Bio::Tools::Run::PiseApplication::confmat.3 \
Bio::Tools::Run::PiseApplication::cons.3 \
Bio::Tools::Run::PiseApplication::consense.3 \
Bio::Tools::Run::PiseApplication::consensus.3 \
Bio::Tools::Run::PiseApplication::cpgplot.3 \
Bio::Tools::Run::PiseApplication::cpgreport.3 \
Bio::Tools::Run::PiseApplication::cusp.3 \
Bio::Tools::Run::PiseApplication::cutseq.3 \
Bio::Tools::Run::PiseApplication::dan.3 \
Bio::Tools::Run::PiseApplication::dca.3 \
Bio::Tools::Run::PiseApplication::decorate.3 \
Bio::Tools::Run::PiseApplication::degapseq.3 \
Bio::Tools::Run::PiseApplication::descseq.3 \
Bio::Tools::Run::PiseApplication::dialign2.3 \
Bio::Tools::Run::PiseApplication::diffseq.3 \
Bio::Tools::Run::PiseApplication::digest.3 \
Bio::Tools::Run::PiseApplication::distmat.3 \
Bio::Tools::Run::PiseApplication::distquart.3 \
Bio::Tools::Run::PiseApplication::dnadist.3 \
Bio::Tools::Run::PiseApplication::dnapars.3 \
Bio::Tools::Run::PiseApplication::dollop.3 \
Bio::Tools::Run::PiseApplication::domainer.3 \
Bio::Tools::Run::PiseApplication::dotmatcher.3 \
Bio::Tools::Run::PiseApplication::dotpath.3 \
Bio::Tools::Run::PiseApplication::dottup.3 \
Bio::Tools::Run::PiseApplication::drawgram.3 \
Bio::Tools::Run::PiseApplication::drawpyr.3 \
Bio::Tools::Run::PiseApplication::drawtree.3 \
Bio::Tools::Run::PiseApplication::dreg.3 \
Bio::Tools::Run::PiseApplication::druid.3 \
Bio::Tools::Run::PiseApplication::dsc.3 \
Bio::Tools::Run::PiseApplication::dssp.3 \
Bio::Tools::Run::PiseApplication::einverted.3 \
Bio::Tools::Run::PiseApplication::emma.3 \
Bio::Tools::Run::PiseApplication::emowse.3 \
Bio::Tools::Run::PiseApplication::environ.3 \
Bio::Tools::Run::PiseApplication::eprimer3.3 \
Bio::Tools::Run::PiseApplication::equicktandem.3 \
Bio::Tools::Run::PiseApplication::est2genome.3 \
Bio::Tools::Run::PiseApplication::etandem.3 \
Bio::Tools::Run::PiseApplication::extractfeat.3 \
Bio::Tools::Run::PiseApplication::extractseq.3 \
Bio::Tools::Run::PiseApplication::fasta.3 \
Bio::Tools::Run::PiseApplication::fastdnaml.3 \
Bio::Tools::Run::PiseApplication::fastrna.3 \
Bio::Tools::Run::PiseApplication::filtersites.3 \
Bio::Tools::Run::PiseApplication::findkm.3 \
Bio::Tools::Run::PiseApplication::fitch.3 \
Bio::Tools::Run::PiseApplication::fmtseq.3 \
Bio::Tools::Run::PiseApplication::freak.3 \
Bio::Tools::Run::PiseApplication::fuzznuc.3 \
Bio::Tools::Run::PiseApplication::fuzzpro.3 \
Bio::Tools::Run::PiseApplication::fuzztran.3 \
Bio::Tools::Run::PiseApplication::gb2xml.3 \
Bio::Tools::Run::PiseApplication::geecee.3 \
Bio::Tools::Run::PiseApplication::genscan.3 \
Bio::Tools::Run::PiseApplication::getblock.3 \
Bio::Tools::Run::PiseApplication::getorf.3 \
Bio::Tools::Run::PiseApplication::gff2ps.3 \
Bio::Tools::Run::PiseApplication::gibbs.3 \
Bio::Tools::Run::PiseApplication::gibbs_scan.3 \
Bio::Tools::Run::PiseApplication::golden.3 \
Bio::Tools::Run::PiseApplication::grailclnt.3 \
Bio::Tools::Run::PiseApplication::gruppi.3 \
Bio::Tools::Run::PiseApplication::helixturnhelix.3 \
Bio::Tools::Run::PiseApplication::hmmalign.3 \
Bio::Tools::Run::PiseApplication::hmmbuild.3 \
Bio::Tools::Run::PiseApplication::hmmcalibrate.3 \
Bio::Tools::Run::PiseApplication::hmmconvert.3 \
Bio::Tools::Run::PiseApplication::hmmemit.3 \
Bio::Tools::Run::PiseApplication::hmmer2sam.3 \
Bio::Tools::Run::PiseApplication::hmmfetch.3 \
Bio::Tools::Run::PiseApplication::hmmpfam.3 \
Bio::Tools::Run::PiseApplication::hmmscore.3 \
Bio::Tools::Run::PiseApplication::hmmsearch.3 \
Bio::Tools::Run::PiseApplication::hmoment.3 \
Bio::Tools::Run::PiseApplication::homology.3 \
Bio::Tools::Run::PiseApplication::html4blast.3 \
Bio::Tools::Run::PiseApplication::iep.3 \
Bio::Tools::Run::PiseApplication::infoalign.3 \
Bio::Tools::Run::PiseApplication::infoseq.3 \
Bio::Tools::Run::PiseApplication::interface.3 \
Bio::Tools::Run::PiseApplication::isochore.3 \
Bio::Tools::Run::PiseApplication::kitsch.3 \
Bio::Tools::Run::PiseApplication::lassap.3 \
Bio::Tools::Run::PiseApplication::lindna.3 \
Bio::Tools::Run::PiseApplication::listor.3 \
Bio::Tools::Run::PiseApplication::loadseq.3 \
Bio::Tools::Run::PiseApplication::lvb.3 \
Bio::Tools::Run::PiseApplication::makehist.3 \
Bio::Tools::Run::PiseApplication::map.3 \
Bio::Tools::Run::PiseApplication::marscan.3 \
Bio::Tools::Run::PiseApplication::maskfeat.3 \
Bio::Tools::Run::PiseApplication::maskseq.3 \
Bio::Tools::Run::PiseApplication::matcher.3 \
Bio::Tools::Run::PiseApplication::megamerger.3 \
Bio::Tools::Run::PiseApplication::melting.3 \
Bio::Tools::Run::PiseApplication::merger.3 \
Bio::Tools::Run::PiseApplication::mfold.3 \
Bio::Tools::Run::PiseApplication::mix.3 \
Bio::Tools::Run::PiseApplication::modelfromalign.3 \
Bio::Tools::Run::PiseApplication::most.3 \
Bio::Tools::Run::PiseApplication::mreps.3 \
Bio::Tools::Run::PiseApplication::msa.3 \
Bio::Tools::Run::PiseApplication::msbar.3 \
Bio::Tools::Run::PiseApplication::mspcrunch.3 \
Bio::Tools::Run::PiseApplication::mview_alig.3 \
Bio::Tools::Run::PiseApplication::mview_blast.3 \
Bio::Tools::Run::PiseApplication::mwfilter.3 \
Bio::Tools::Run::PiseApplication::needle.3 \
Bio::Tools::Run::PiseApplication::neighbor.3 \
Bio::Tools::Run::PiseApplication::newcpgreport.3 \
Bio::Tools::Run::PiseApplication::newcpgseek.3 \
Bio::Tools::Run::PiseApplication::newseq.3 \
Bio::Tools::Run::PiseApplication::njdist.3 \
Bio::Tools::Run::PiseApplication::nnssp.3 \
Bio::Tools::Run::PiseApplication::notseq.3 \
Bio::Tools::Run::PiseApplication::nrscope.3 \
Bio::Tools::Run::PiseApplication::nthseq.3 \
Bio::Tools::Run::PiseApplication::octanol.3 \
Bio::Tools::Run::PiseApplication::oddcomp.3 \
Bio::Tools::Run::PiseApplication::palindrome.3 \
Bio::Tools::Run::PiseApplication::pam.3 \
Bio::Tools::Run::PiseApplication::parciquart.3 \
Bio::Tools::Run::PiseApplication::pars.3 \
Bio::Tools::Run::PiseApplication::pasteseq.3 \
Bio::Tools::Run::PiseApplication::patmatdb.3 \
Bio::Tools::Run::PiseApplication::patmatmotifs.3 \
Bio::Tools::Run::PiseApplication::patser.3 \
Bio::Tools::Run::PiseApplication::pdbsearch.3 \
Bio::Tools::Run::PiseApplication::pepcoil.3 \
Bio::Tools::Run::PiseApplication::pepinfo.3 \
Bio::Tools::Run::PiseApplication::pepnet.3 \
Bio::Tools::Run::PiseApplication::pepstats.3 \
Bio::Tools::Run::PiseApplication::pepwheel.3 \
Bio::Tools::Run::PiseApplication::pepwindow.3 \
Bio::Tools::Run::PiseApplication::pepwindowall.3 \
Bio::Tools::Run::PiseApplication::pestfind.3 \
Bio::Tools::Run::PiseApplication::pftools.3 \
Bio::Tools::Run::PiseApplication::phiblast.3 \
Bio::Tools::Run::PiseApplication::pima.3 \
Bio::Tools::Run::PiseApplication::plotcon.3 \
Bio::Tools::Run::PiseApplication::plotorf.3 \
Bio::Tools::Run::PiseApplication::plsearch.3 \
Bio::Tools::Run::PiseApplication::polydot.3 \
Bio::Tools::Run::PiseApplication::pratt.3 \
Bio::Tools::Run::PiseApplication::predator.3 \
Bio::Tools::Run::PiseApplication::preg.3 \
Bio::Tools::Run::PiseApplication::prettyalign.3 \
Bio::Tools::Run::PiseApplication::prettyplot.3 \
Bio::Tools::Run::PiseApplication::prettyseq.3 \
Bio::Tools::Run::PiseApplication::primersearch.3 \
Bio::Tools::Run::PiseApplication::primo.3 \
Bio::Tools::Run::PiseApplication::prodom.3 \
Bio::Tools::Run::PiseApplication::profit.3 \
Bio::Tools::Run::PiseApplication::prophecy.3 \
Bio::Tools::Run::PiseApplication::prophet.3 \
Bio::Tools::Run::PiseApplication::prose.3 \
Bio::Tools::Run::PiseApplication::prot_nucml.3 \
Bio::Tools::Run::PiseApplication::protal2dna.3 \
Bio::Tools::Run::PiseApplication::protdist.3 \
Bio::Tools::Run::PiseApplication::protpars.3 \
Bio::Tools::Run::PiseApplication::pscan.3 \
Bio::Tools::Run::PiseApplication::psiblast.3 \
Bio::Tools::Run::PiseApplication::psort2.3 \
Bio::Tools::Run::PiseApplication::pyramids.3 \
Bio::Tools::Run::PiseApplication::pyreval.3 \
Bio::Tools::Run::PiseApplication::qstar.3 \
Bio::Tools::Run::PiseApplication::quicktree.3 \
Bio::Tools::Run::PiseApplication::readnexus.3 \
Bio::Tools::Run::PiseApplication::readseq.3 \
Bio::Tools::Run::PiseApplication::recoder.3 \
Bio::Tools::Run::PiseApplication::redata.3 \
Bio::Tools::Run::PiseApplication::remap.3 \
Bio::Tools::Run::PiseApplication::repeats.3 \
Bio::Tools::Run::PiseApplication::restover.3 \
Bio::Tools::Run::PiseApplication::restrict.3 \
Bio::Tools::Run::PiseApplication::revseq.3 \
Bio::Tools::Run::PiseApplication::rnadistance.3 \
Bio::Tools::Run::PiseApplication::rnaeval.3 \
Bio::Tools::Run::PiseApplication::rnafold.3 \
Bio::Tools::Run::PiseApplication::rnaga.3 \
Bio::Tools::Run::PiseApplication::rnaheat.3 \
Bio::Tools::Run::PiseApplication::rnainverse.3 \
Bio::Tools::Run::PiseApplication::rnapdist.3 \
Bio::Tools::Run::PiseApplication::rnasubopt.3 \
Bio::Tools::Run::PiseApplication::sam2hmmer.3 \
Bio::Tools::Run::PiseApplication::sampleseqs.3 \
Bio::Tools::Run::PiseApplication::saps.3 \
Bio::Tools::Run::PiseApplication::satellites.3 \
Bio::Tools::Run::PiseApplication::scan_for_matches.3 \
Bio::Tools::Run::PiseApplication::scope.3 \
Bio::Tools::Run::PiseApplication::scopparse.3 \
Bio::Tools::Run::PiseApplication::seqboot.3 \
Bio::Tools::Run::PiseApplication::seqgen.3 \
Bio::Tools::Run::PiseApplication::seqmatchall.3 \
Bio::Tools::Run::PiseApplication::seqsblast.3 \
Bio::Tools::Run::PiseApplication::seqstat.3 \
Bio::Tools::Run::PiseApplication::showalign.3 \
Bio::Tools::Run::PiseApplication::showfeat.3 \
Bio::Tools::Run::PiseApplication::showorf.3 \
Bio::Tools::Run::PiseApplication::showseq.3 \
Bio::Tools::Run::PiseApplication::shuffleseq.3 \
Bio::Tools::Run::PiseApplication::sigcleave.3 \
Bio::Tools::Run::PiseApplication::siggen.3 \
Bio::Tools::Run::PiseApplication::sigscan.3 \
Bio::Tools::Run::PiseApplication::silent.3 \
Bio::Tools::Run::PiseApplication::sirna.3 \
Bio::Tools::Run::PiseApplication::splitter.3 \
Bio::Tools::Run::PiseApplication::sreformat.3 \
Bio::Tools::Run::PiseApplication::stretcher.3 \
Bio::Tools::Run::PiseApplication::stride.3 \
Bio::Tools::Run::PiseApplication::stssearch.3 \
Bio::Tools::Run::PiseApplication::supermatcher.3 \
Bio::Tools::Run::PiseApplication::syco.3 \
Bio::Tools::Run::PiseApplication::tacg.3 \
Bio::Tools::Run::PiseApplication::tfscan.3 \
Bio::Tools::Run::PiseApplication::tipdate.3 \
Bio::Tools::Run::PiseApplication::tmap.3 \
Bio::Tools::Run::PiseApplication::toppred.3 \
Bio::Tools::Run::PiseApplication::tranalign.3 \
Bio::Tools::Run::PiseApplication::transeq.3 \
Bio::Tools::Run::PiseApplication::treealign.3 \
Bio::Tools::Run::PiseApplication::trimest.3 \
Bio::Tools::Run::PiseApplication::trimseq.3 \
Bio::Tools::Run::PiseApplication::trnascan.3 \
Bio::Tools::Run::PiseApplication::twofeat.3 \
Bio::Tools::Run::PiseApplication::unroot.3 \
Bio::Tools::Run::PiseApplication::vectorstrip.3 \
Bio::Tools::Run::PiseApplication::water.3 \
Bio::Tools::Run::PiseApplication::weighbor.3 \
Bio::Tools::Run::PiseApplication::whichdb.3 \
Bio::Tools::Run::PiseApplication::wise2.3 \
Bio::Tools::Run::PiseApplication::wobble.3 \
Bio::Tools::Run::PiseApplication::wordcount.3 \
Bio::Tools::Run::PiseApplication::wordmatch.3 \
Bio::Tools::Run::PiseApplication::wublast2.3 \
Bio::Tools::Run::PiseApplication::xblast.3 \
Bio::Tools::Run::PiseApplication::xpound.3 \
Bio::Tools::Run::PiseJob.3 \
Bio::Tools::Run::PiseJobParser.3 \
Bio::Tools::Run::PiseWorkflow.3 \
Bio::Tools::Run::Primate.3 \
Bio::Tools::Run::Primer3.3 \
Bio::Tools::Run::Prints.3 \
Bio::Tools::Run::Profile.3 \
Bio::Tools::Run::Promoterwise.3 \
Bio::Tools::Run::Pseudowise.3 \
Bio::Tools::Run::RepeatMasker.3 \
Bio::Tools::Run::Seg.3 \
Bio::Tools::Run::Signalp.3 \
Bio::Tools::Run::Tmhmm.3 \
Bio::Tools::Run::TribeMCL.3 \
Bio::Tools::Run::Vista.3
# now install all extra stuff (docs, examples, scripts)
post-install:
${MKDIR} ${DATADIR}
@${CP} -Rv ${WRKSRC}/scripts ${DATADIR}
${MKDIR} ${EXAMPLESDIR}
@${CP} -Rv ${WRKSRC}/examples/* ${EXAMPLESDIR}
.if !defined(NOPORTDOCS)
${MKDIR} ${DOCSDIR}
.for doc in AUTHORS Changes INSTALL.PROGRAMS README
${INSTALL_DATA} ${WRKSRC}/${doc} ${DOCSDIR}
.endfor
.endif
.include <bsd.port.mk>

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MD5 (bioperl-run-1.5.1.tar.gz) = dbfce41fa5d86dab5fd1d6af4196c646
SHA256 (bioperl-run-1.5.1.tar.gz) = d9e1f5bdff5541376cab1c8b7e8db9bedbbb7b6f76b965d55dc20122a98f93e8
SIZE (bioperl-run-1.5.1.tar.gz) = 864369

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@ -1,5 +0,0 @@
Bioperl-run contain modules that provides a PERL interface to various
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.
WWW: http://bioperl.org/

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%%SITE_PERL%%/Bio/Factory/EMBOSS.pm
%%SITE_PERL%%/Bio/Installer/Clustalw.pm
%%SITE_PERL%%/Bio/Installer/EMBOSS.pm
%%SITE_PERL%%/Bio/Installer/Generic.pm
%%SITE_PERL%%/Bio/Installer/PAML.pm
%%SITE_PERL%%/Bio/Installer/Probcons.pm
%%SITE_PERL%%/Bio/Installer/TCoffee.pm
%%SITE_PERL%%/Bio/Tools/Run/AbstractRunner.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Blat.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Clustalw.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/DBA.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Exonerate.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Lagan.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/MAFFT.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Muscle.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Probcons.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/Sim4.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/StandAloneFasta.pm
%%SITE_PERL%%/Bio/Tools/Run/Alignment/TCoffee.pm
%%SITE_PERL%%/Bio/Tools/Run/Analysis.pm
%%SITE_PERL%%/Bio/Tools/Run/Analysis/soap.pm
%%SITE_PERL%%/Bio/Tools/Run/AnalysisFactory.pm
%%SITE_PERL%%/Bio/Tools/Run/AnalysisFactory/Pise.pm
%%SITE_PERL%%/Bio/Tools/Run/AnalysisFactory/soap.pm
%%SITE_PERL%%/Bio/Tools/Run/Coil.pm
%%SITE_PERL%%/Bio/Tools/Run/EMBOSSApplication.pm
%%SITE_PERL%%/Bio/Tools/Run/EMBOSSacd.pm
%%SITE_PERL%%/Bio/Tools/Run/Eponine.pm
%%SITE_PERL%%/Bio/Tools/Run/FootPrinter.pm
%%SITE_PERL%%/Bio/Tools/Run/Genewise.pm
%%SITE_PERL%%/Bio/Tools/Run/Genscan.pm
%%SITE_PERL%%/Bio/Tools/Run/Hmmer.pm
%%SITE_PERL%%/Bio/Tools/Run/JavaRunner.pm
%%SITE_PERL%%/Bio/Tools/Run/Mdust.pm
%%SITE_PERL%%/Bio/Tools/Run/Phrap.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Forester/SDI.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/LVB.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Molphy/ProtML.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/PAML/Baseml.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/PAML/Codeml.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/PAML/Yn00.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/Base.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/Consense.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/DrawGram.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/DrawTree.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm
%%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/CSR.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/Puzzle.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/abiview.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/addquart.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/align2model.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/alistat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/antigenic.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/assp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/backtranseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/bambe.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/banana.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/bionj.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/biosed.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/bl2seq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/blast2.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/blimps.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/blimps_block.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/blimps_matrix.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/boxshade.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/btwisted.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cai.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cap.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cds.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/chaos.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/charge.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/checktrans.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/chips.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cirdna.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/clique.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/clustalw.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/clustalw_convert.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/codcmp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/coderet.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/codnocod.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/codontree.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/codonw.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/comalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/combat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/compseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/con_filter.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/confmat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cons.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/consense.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/consensus.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cpgplot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cpgreport.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cusp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/cutseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dca.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/decorate.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/degapseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/descseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dialign2.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/diffseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/digest.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/distmat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/distquart.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dnadist.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dnapars.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dollop.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/domainer.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dotmatcher.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dotpath.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dottup.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/drawgram.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/drawpyr.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/drawtree.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dreg.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/druid.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dsc.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/dssp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/einverted.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/emma.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/emowse.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/environ.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/eprimer3.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/equicktandem.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/est2genome.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/etandem.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/extractfeat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/extractseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fasta.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fastdnaml.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fastrna.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/filtersites.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/findkm.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fitch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fmtseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/freak.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fuzznuc.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fuzzpro.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/fuzztran.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/gb2xml.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/geecee.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/genscan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/getblock.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/getorf.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/gff2ps.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/gibbs.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/gibbs_scan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/golden.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/grailclnt.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/gruppi.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/helixturnhelix.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmbuild.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmcalibrate.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmconvert.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmemit.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmer2sam.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmfetch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmpfam.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmscore.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmmsearch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/hmoment.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/homology.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/html4blast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/iep.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/infoalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/infoseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/interface.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/isochore.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/kitsch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/lassap.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/lindna.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/listor.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/loadseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/lvb.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/makehist.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/map.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/marscan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/maskfeat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/maskseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/matcher.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/megamerger.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/melting.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/merger.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mfold.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mix.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/modelfromalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/most.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mreps.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/msa.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/msbar.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mspcrunch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mview_alig.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mview_blast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/mwfilter.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/needle.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/neighbor.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/newcpgreport.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/newcpgseek.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/newseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/njdist.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/nnssp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/notseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/nrscope.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/nthseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/octanol.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/oddcomp.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/palindrome.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pam.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/parciquart.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pars.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pasteseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/patmatdb.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/patmatmotifs.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/patser.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pdbsearch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepcoil.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepinfo.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepnet.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepstats.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepwheel.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepwindow.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pepwindowall.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pestfind.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pftools.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/phiblast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pima.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/plotcon.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/plotorf.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/plsearch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/polydot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pratt.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/predator.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/preg.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prettyalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prettyplot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prettyseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/primersearch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/primo.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prodom.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/profit.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prophecy.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prophet.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prose.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/prot_nucml.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/protal2dna.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/protdist.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/protpars.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pscan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/psiblast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/psort2.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pyramids.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/pyreval.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/qstar.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/quicktree.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/readnexus.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/readseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/recoder.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/redata.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/remap.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/repeats.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/restover.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/restrict.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/revseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnadistance.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnaeval.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnafold.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnaga.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnaheat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnainverse.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnapdist.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/rnasubopt.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sam2hmmer.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sampleseqs.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/saps.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/satellites.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/scan_for_matches.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/scope.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/scopparse.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/seqboot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/seqgen.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/seqmatchall.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/seqsblast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/seqstat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/showalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/showfeat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/showorf.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/showseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/shuffleseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sigcleave.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/siggen.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sigscan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/silent.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sirna.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/splitter.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/sreformat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/stretcher.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/stride.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/stssearch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/supermatcher.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/syco.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/tacg.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/tfscan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/tipdate.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/tmap.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/toppred.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/tranalign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/transeq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/treealign.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/trimest.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/trimseq.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/trnascan.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/twofeat.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/unroot.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/vectorstrip.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/water.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/weighbor.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/whichdb.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/wise2.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/wobble.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/wordcount.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/wordmatch.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/wublast2.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/xblast.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseApplication/xpound.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseJob.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseJobParser.pm
%%SITE_PERL%%/Bio/Tools/Run/PiseWorkflow.pm
%%SITE_PERL%%/Bio/Tools/Run/Primate.pm
%%SITE_PERL%%/Bio/Tools/Run/Primer3.pm
%%SITE_PERL%%/Bio/Tools/Run/Prints.pm
%%SITE_PERL%%/Bio/Tools/Run/Profile.pm
%%SITE_PERL%%/Bio/Tools/Run/Promoterwise.pm
%%SITE_PERL%%/Bio/Tools/Run/Pseudowise.pm
%%SITE_PERL%%/Bio/Tools/Run/RepeatMasker.pm
%%SITE_PERL%%/Bio/Tools/Run/Seg.pm
%%SITE_PERL%%/Bio/Tools/Run/Signalp.pm
%%SITE_PERL%%/Bio/Tools/Run/Tmhmm.pm
%%SITE_PERL%%/Bio/Tools/Run/TribeMCL.pm
%%SITE_PERL%%/Bio/Tools/Run/Vista.pm
%%DATADIR%%/scripts/bioperl_application_installer.PLS
%%DATADIR%%/scripts/panalysis.PLS
%%DATADIR%%/scripts/papplmaker.PLS
%%DATADIR%%/scripts/run_neighbor.PLS
%%DATADIR%%/scripts/run_protdist.PLS
%%PORTDOCS%%%%DOCSDIR%%/AUTHORS
%%PORTDOCS%%%%DOCSDIR%%/Changes
%%PORTDOCS%%%%DOCSDIR%%/INSTALL.PROGRAMS
%%PORTDOCS%%%%DOCSDIR%%/README
%%EXAMPLESDIR%%/pise/blast-kun.pl
%%EXAMPLESDIR%%/pise/blast2.pl
%%EXAMPLESDIR%%/pise/clustalw.pl
%%EXAMPLESDIR%%/pise/dnadist.data
%%EXAMPLESDIR%%/pise/dnadist.pl
%%EXAMPLESDIR%%/pise/genscan.pl
%%EXAMPLESDIR%%/pise/needle.pl
%%EXAMPLESDIR%%/pise/phylo-kun.pl
%%EXAMPLESDIR%%/pise/toppred.pl
@dirrm %%EXAMPLESDIR%%/pise
@dirrm %%EXAMPLESDIR%%
%%PORTDOCS%%@dirrm %%DOCSDIR%%
@dirrm %%DATADIR%%/scripts
@dirrm %%DATADIR%%
@dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio
@dirrm %%SITE_PERL%%/Bio/Tools/Run/PiseApplication
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Phylo/Phylip
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Phylo/PAML
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Phylo/Molphy
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Phylo/Forester
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Phylo
@dirrm %%SITE_PERL%%/Bio/Tools/Run/AnalysisFactory
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Analysis
@dirrm %%SITE_PERL%%/Bio/Tools/Run/Alignment
@dirrmtry %%SITE_PERL%%/Bio/Tools/Run
@dirrmtry %%SITE_PERL%%/Bio/Tools
@dirrm %%SITE_PERL%%/Bio/Installer
@dirrmtry %%SITE_PERL%%/Bio/Factory
@dirrmtry %%SITE_PERL%%/Bio

View File

@ -22,7 +22,6 @@
SUBDIR += dctc-gui
SUBDIR += dctc-gui-qt
SUBDIR += deluge
SUBDIR += deluge05
SUBDIR += ed2k
SUBDIR += edonkey-gui-gtk
SUBDIR += edonkey-gui-gtk-urlslave

View File

@ -1,57 +0,0 @@
# New ports collection makefile for: deluge
# Date created: 03 December 2006
# Whom: Mezz <mezz@FreeBSD.org>
#
# $FreeBSD$
#
PORTNAME= deluge
PORTVERSION= 0.5.9.4
CATEGORIES= net-p2p python
MASTER_SITES= http://ftp.osuosl.org/pub/deluge/source/${PORTVERSION}/
MAINTAINER= ports@FreeBSD.org
COMMENT= A Bittorrent client, using Python, GTK+2 and Rasterbar libtorrent
LIB_DEPENDS= boost_thread.4:${PORTSDIR}/devel/boost
RUN_DEPENDS= xdg-open:${PORTSDIR}/devel/xdg-utils \
${PYTHON_SITELIBDIR}/xdg/__init__.py:${PORTSDIR}/devel/py-xdg \
${PYTHON_SITELIBDIR}/dbus/__init__.py:${PORTSDIR}/devel/py-dbus \
${PYTHON_SITELIBDIR}/gtk-2.0/pynotify/__init__.py:${PORTSDIR}/devel/py-notify \
${PYTHON_SITELIBDIR}/OpenSSL/__init__.py:${PORTSDIR}/security/py-openssl
DEPRECIATED= use net-p2p/deluge instead
EXPIRATION_DATE= 2009-06-01
LATEST_LINK= ${PORTNAME}05
WRKSRC= ${WRKDIR}/${PORTNAME}-torrent-${PORTVERSION}
USE_GNOME= pygtk2 desktopfileutils librsvg2
USE_GETTEXT= yes
USE_OPENSSL= yes
USE_PYTHON= yes
USE_PYDISTUTILS=yes
INSTALLS_ICONS= yes
DOCS= LICENSE README
.include <bsd.port.pre.mk>
.if ${ARCH} == "sparc64" || ${ARCH} == "ia64" || ${ARCH} == "amd64"
CFLAGS+= -DAMD64
.endif
post-patch:
@${REINPLACE_CMD} -e 's|%%LOCALBASE%%|${LOCALBASE}|g ; \
s|%%PTHREAD_LIBS%%|${PTHREAD_LIBS}|g' ${WRKSRC}/setup.py
post-install:
@-update-desktop-database
.ifndef (NOPORTDOCS)
@${MKDIR} ${DOCSDIR}
.for i in ${DOCS}
@${INSTALL_DATA} ${WRKSRC}/${i} ${DOCSDIR}
.endfor
.endif
.include <bsd.port.post.mk>

View File

@ -1,3 +0,0 @@
MD5 (deluge-0.5.9.4.tar.gz) = 8baee1df11074ca523d57ddc157a4ce4
SHA256 (deluge-0.5.9.4.tar.gz) = 6454944e96b88819b92fd77aaa86f56d46fbbaaeb264424d7b3caf8cfec7442e
SIZE (deluge-0.5.9.4.tar.gz) = 2229519

View File

@ -1,61 +0,0 @@
--- glade/preferences_dialog.glade.orig 2008-01-30 13:03:26.000000000 -0600
+++ glade/preferences_dialog.glade 2008-01-30 13:04:06.000000000 -0600
@@ -2673,7 +2673,7 @@
</child>
<child>
<widget class="GtkFrame" id="frame4">
- <property name="visible">True</property>
+ <property name="visible">False</property>
<property name="events">GDK_POINTER_MOTION_MASK | GDK_POINTER_MOTION_HINT_MASK | GDK_BUTTON_PRESS_MASK | GDK_BUTTON_RELEASE_MASK</property>
<property name="label_xalign">0</property>
<property name="shadow_type">GTK_SHADOW_NONE</property>
--- src/interface.py.orig 2008-01-30 13:03:33.000000000 -0600
+++ src/interface.py 2008-01-30 13:04:38.000000000 -0600
@@ -1037,8 +1037,6 @@
# Load plugins after we showed main window (if not started in tray)
self.load_plugins()
self.load_tabs_order()
- if self.config.get("new_releases"):
- self.new_release_check()
try:
gobject.threads_init()
@@ -1048,38 +1046,6 @@
except KeyboardInterrupt:
self.manager.quit()
- def new_release_check(self):
- import socket
- import urllib
- timeout = 5
- socket.setdefaulttimeout(timeout)
- try:
- gtk.gdk.threads_enter()
- except:
- pass
- try:
- new_release = urllib.urlopen("http://download.deluge-torrent.org/version").read().strip()
- except IOError:
- print "Network error while trying to check for a newer version of \
-Deluge"
- try:
- gtk.gdk.threads_leave()
- except:
- pass
- return
-
- if new_release > common.PROGRAM_VERSION:
- result = dialogs.show_popup_question(None, _("There is a newer version \
-of Deluge. Would you like to be taken to our download site?"))
- if result:
- common.open_url_in_browser('http://download.deluge-torrent.org/')
- else:
- pass
- try:
- gtk.gdk.threads_leave()
- except:
- pass
-
def load_plugins(self):
enable_plugins = self.config.get('enabled_plugins').split(':')
for plugin in enable_plugins:

View File

@ -1,10 +0,0 @@
--- libtorrent/include/libtorrent/disk_io_thread.hpp.orig 2008-07-23 00:04:51.000000000 +0400
+++ libtorrent/include/libtorrent/disk_io_thread.hpp 2009-03-21 17:06:18.000000000 +0300
@@ -41,6 +41,7 @@
#include <boost/thread/thread.hpp>
#include <boost/function.hpp>
#include <boost/thread/mutex.hpp>
+#include <boost/thread/condition.hpp>
#include <boost/bind.hpp>
#include <boost/pool/pool.hpp>
#include <boost/noncopyable.hpp>

View File

@ -1,40 +0,0 @@
--- setup.py.orig 2008-05-19 17:26:22.000000000 -0500
+++ setup.py 2008-05-19 17:28:27.000000000 -0500
@@ -103,13 +103,13 @@
"-DHAVE_INCLUDE_LIBTORRENT_ASIO_SSL_STREAM_HPP=1",
"-DHAVE_INCLUDE_LIBTORRENT_ASIO_IP_TCP_HPP=1",
"-DHAVE_PTHREAD=1", "-DTORRENT_USE_OPENSSL=1", "-DHAVE_SSL=1",
- "-DNDEBUG=1", "-O2"]
- if ARCH == "x64":
- EXTRA_COMPILE_ARGS.append("-DAMD64")
+ "-DNDEBUG=1"]
+# if ARCH == "x64":
+# EXTRA_COMPILE_ARGS.append("-DAMD64")
includedirs = ['./libtorrent', './libtorrent/include',
'./libtorrent/include/libtorrent',
- '/usr/include/python' + python_version]
+ '%%LOCALBASE%%/include']
if OS == "linux":
if os.path.exists(os.path.join(sysconfig.get_config_vars()['LIBDIR'], \
@@ -148,7 +148,7 @@
boost_thread = "boost_thread-mt"
librariestype = [boost_filesystem, boost_date_time,
- boost_thread, 'z', 'pthread', 'ssl', 'crypto']
+ boost_thread, 'z', 'ssl', 'crypto']
if os == "linux":
librariestype += ['rt']
@@ -205,8 +205,10 @@
sources.remove('libtorrent/src/file_win.cpp')
deluge_core = Extension('deluge_core',
include_dirs = includedirs,
+ library_dirs = ['%%LOCALBASE%%/lib'],
libraries = librariestype,
extra_compile_args = EXTRA_COMPILE_ARGS,
+ extra_link_args = ['%%PTHREAD_LIBS%%'],
sources = sources)
else:
sources.remove('libtorrent\\src\\file.cpp')

View File

@ -1,8 +0,0 @@
Deluge is a Bittorrent client written in Python and GTK+. Deluge is intended
to bring a native, full-featured client to Linux, BSD, and other *NIX GTK
desktop environments such as Gnome and XFCE.
Deluge uses Rasterbar's version of libtorrent as the main ingredient in its
bittorrent protocol backend.
WWW: http://deluge-torrent.org/

View File

@ -1,844 +0,0 @@
bin/deluge
%%PYTHON_SITELIBDIR%%/deluge/__init__.py
%%PYTHON_SITELIBDIR%%/deluge/__init__.pyc
%%PYTHON_SITELIBDIR%%/deluge/__init__.pyo
%%PYTHON_SITELIBDIR%%/deluge/_dbus.py
%%PYTHON_SITELIBDIR%%/deluge/_dbus.pyc
%%PYTHON_SITELIBDIR%%/deluge/_dbus.pyo
%%PYTHON_SITELIBDIR%%/deluge/common.py
%%PYTHON_SITELIBDIR%%/deluge/common.pyc
%%PYTHON_SITELIBDIR%%/deluge/common.pyo
%%PYTHON_SITELIBDIR%%/deluge/core.py
%%PYTHON_SITELIBDIR%%/deluge/core.pyc
%%PYTHON_SITELIBDIR%%/deluge/core.pyo
%%PYTHON_SITELIBDIR%%/deluge/deluge_core.so
%%PYTHON_SITELIBDIR%%/deluge/deluge_stats.py
%%PYTHON_SITELIBDIR%%/deluge/deluge_stats.pyc
%%PYTHON_SITELIBDIR%%/deluge/deluge_stats.pyo
%%PYTHON_SITELIBDIR%%/deluge/dgtk.py
%%PYTHON_SITELIBDIR%%/deluge/dgtk.pyc
%%PYTHON_SITELIBDIR%%/deluge/dgtk.pyo
%%PYTHON_SITELIBDIR%%/deluge/dialogs.py
%%PYTHON_SITELIBDIR%%/deluge/dialogs.pyc
%%PYTHON_SITELIBDIR%%/deluge/dialogs.pyo
%%PYTHON_SITELIBDIR%%/deluge/files.py
%%PYTHON_SITELIBDIR%%/deluge/files.pyc
%%PYTHON_SITELIBDIR%%/deluge/files.pyo
%%PYTHON_SITELIBDIR%%/deluge/interface.py
%%PYTHON_SITELIBDIR%%/deluge/interface.pyc
%%PYTHON_SITELIBDIR%%/deluge/interface.pyo
%%PYTHON_SITELIBDIR%%/deluge/ipc_manager.py
%%PYTHON_SITELIBDIR%%/deluge/ipc_manager.pyc
%%PYTHON_SITELIBDIR%%/deluge/ipc_manager.pyo
%%PYTHON_SITELIBDIR%%/deluge/plugins.py
%%PYTHON_SITELIBDIR%%/deluge/plugins.pyc
%%PYTHON_SITELIBDIR%%/deluge/plugins.pyo
%%PYTHON_SITELIBDIR%%/deluge/pref.py
%%PYTHON_SITELIBDIR%%/deluge/pref.pyc
%%PYTHON_SITELIBDIR%%/deluge/pref.pyo
%%PYTHON_SITELIBDIR%%/deluge/search.py
%%PYTHON_SITELIBDIR%%/deluge/search.pyc
%%PYTHON_SITELIBDIR%%/deluge/search.pyo
%%PYTHON_SITELIBDIR%%/deluge/tab_details.py
%%PYTHON_SITELIBDIR%%/deluge/tab_details.pyc
%%PYTHON_SITELIBDIR%%/deluge/tab_details.pyo
%%PYTHON_SITELIBDIR%%/deluge/wizard.py
%%PYTHON_SITELIBDIR%%/deluge/wizard.pyc
%%PYTHON_SITELIBDIR%%/deluge/wizard.pyo
share/applications/deluge.desktop
%%DATADIR%%/glade/aboutdialog.glade
%%DATADIR%%/glade/browser.glade
%%DATADIR%%/glade/browserwin.glade
%%DATADIR%%/glade/delugegtk.glade
%%DATADIR%%/glade/dgtkpopups.glade
%%DATADIR%%/glade/edit_trackers.glade
%%DATADIR%%/glade/file_tab_menu.glade
%%DATADIR%%/glade/files_dialog.glade
%%DATADIR%%/glade/list_bookmarks.glade
%%DATADIR%%/glade/merge_dialog.glade
%%DATADIR%%/glade/preferences_dialog.glade
%%DATADIR%%/glade/searchdlg.glade
%%DATADIR%%/glade/torrent_menu.glade
%%DATADIR%%/glade/tray_menu.glade
%%DATADIR%%/glade/wizard.glade
%%DATADIR%%/icons/scalable/apps/deluge.svg
%%DATADIR%%/pixmaps/browser.png
%%DATADIR%%/pixmaps/deluge-about.png
%%DATADIR%%/pixmaps/deluge.png
%%DATADIR%%/pixmaps/deluge.svg
%%DATADIR%%/pixmaps/downloading16.png
%%DATADIR%%/pixmaps/flags18x12/ad.png
%%DATADIR%%/pixmaps/flags18x12/ae.png
%%DATADIR%%/pixmaps/flags18x12/af.png
%%DATADIR%%/pixmaps/flags18x12/ag.png
%%DATADIR%%/pixmaps/flags18x12/ai.png
%%DATADIR%%/pixmaps/flags18x12/al.png
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%%DATADIR%%/pixmaps/flags18x12/bg.png
%%DATADIR%%/pixmaps/flags18x12/bh.png
%%DATADIR%%/pixmaps/flags18x12/bi.png
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%%DATADIR%%/pixmaps/flags18x12/bo.png
%%DATADIR%%/pixmaps/flags18x12/br.png
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%%DATADIR%%/pixmaps/flags18x12/ch.png
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%%DATADIR%%/plugins/WebUi/static/images/tango/queue-down.png
%%DATADIR%%/plugins/WebUi/static/images/tango/queue-up.png
%%DATADIR%%/plugins/WebUi/static/images/tango/start.png
%%DATADIR%%/plugins/WebUi/static/images/tango/stop.png
%%DATADIR%%/plugins/WebUi/static/images/tango/system-log-out.png
%%DATADIR%%/plugins/WebUi/static/images/tango/up.png
%%DATADIR%%/plugins/WebUi/static/images/tango/user-trash.png
%%DATADIR%%/plugins/WebUi/static/images/tango/view-refresh.png
%%DATADIR%%/plugins/WebUi/static/simple_site_style.css
%%DATADIR%%/plugins/WebUi/templates/advanced/header.html
%%DATADIR%%/plugins/WebUi/templates/advanced/index.html
%%DATADIR%%/plugins/WebUi/templates/advanced/part_categories.html
%%DATADIR%%/plugins/WebUi/templates/advanced/part_stats.html
%%DATADIR%%/plugins/WebUi/templates/advanced/part_tb_button.html
%%DATADIR%%/plugins/WebUi/templates/advanced/static/advanced.css
%%DATADIR%%/plugins/WebUi/templates/advanced/static/deluge.js
%%DATADIR%%/plugins/WebUi/templates/advanced/static/scrolling_table.css
%%DATADIR%%/plugins/WebUi/templates/advanced/torrent_info_inner.html
%%DATADIR%%/plugins/WebUi/templates/deluge/about.html
%%DATADIR%%/plugins/WebUi/templates/deluge/authors.txt
%%DATADIR%%/plugins/WebUi/templates/deluge/config.html
%%DATADIR%%/plugins/WebUi/templates/deluge/error.html
%%DATADIR%%/plugins/WebUi/templates/deluge/footer.html
%%DATADIR%%/plugins/WebUi/templates/deluge/header.html
%%DATADIR%%/plugins/WebUi/templates/deluge/index.html
%%DATADIR%%/plugins/WebUi/templates/deluge/login.html
%%DATADIR%%/plugins/WebUi/templates/deluge/part_button.html
%%DATADIR%%/plugins/WebUi/templates/deluge/part_stats.html
%%DATADIR%%/plugins/WebUi/templates/deluge/refresh_form.html
%%DATADIR%%/plugins/WebUi/templates/deluge/sort_column_head.html
%%DATADIR%%/plugins/WebUi/templates/deluge/tab_meta.html
%%DATADIR%%/plugins/WebUi/templates/deluge/torrent_add.html
%%DATADIR%%/plugins/WebUi/templates/deluge/torrent_delete.html
%%DATADIR%%/plugins/WebUi/templates/deluge/torrent_info.html
%%DATADIR%%/plugins/WebUi/templates/hacking-templates.txt
%%DATADIR%%/plugins/WebUi/tests/test_all.py
%%DATADIR%%/plugins/WebUi/version
%%DATADIR%%/plugins/WebUi/webserver_common.py
%%DATADIR%%/plugins/WebUi/webserver_framework.py
%%PORTDOCS%%%%DOCSDIR%%/LICENSE
%%PORTDOCS%%%%DOCSDIR%%/README
share/icons/hicolor/128x128/apps/deluge.png
share/icons/hicolor/16x16/apps/deluge.png
share/icons/hicolor/192x192/apps/deluge.png
share/icons/hicolor/22x22/apps/deluge.png
share/icons/hicolor/24x24/apps/deluge.png
share/icons/hicolor/256x256/apps/deluge.png
share/icons/hicolor/32x32/apps/deluge.png
share/icons/hicolor/36x36/apps/deluge.png
share/icons/hicolor/48x48/apps/deluge.png
share/icons/hicolor/64x64/apps/deluge.png
share/icons/hicolor/72x72/apps/deluge.png
share/icons/hicolor/96x96/apps/deluge.png
share/locale/ar/LC_MESSAGES/deluge.mo
share/locale/ast/LC_MESSAGES/deluge.mo
share/locale/bg/LC_MESSAGES/deluge.mo
share/locale/bs/LC_MESSAGES/deluge.mo
share/locale/ca/LC_MESSAGES/deluge.mo
share/locale/cs/LC_MESSAGES/deluge.mo
share/locale/cy/LC_MESSAGES/deluge.mo
share/locale/da/LC_MESSAGES/deluge.mo
share/locale/de/LC_MESSAGES/deluge.mo
share/locale/el/LC_MESSAGES/deluge.mo
share/locale/en_AU/LC_MESSAGES/deluge.mo
share/locale/en_CA/LC_MESSAGES/deluge.mo
share/locale/en_GB/LC_MESSAGES/deluge.mo
share/locale/eo/LC_MESSAGES/deluge.mo
share/locale/es/LC_MESSAGES/deluge.mo
share/locale/et/LC_MESSAGES/deluge.mo
share/locale/eu/LC_MESSAGES/deluge.mo
share/locale/fa/LC_MESSAGES/deluge.mo
share/locale/fi/LC_MESSAGES/deluge.mo
share/locale/fr/LC_MESSAGES/deluge.mo
share/locale/fy/LC_MESSAGES/deluge.mo
share/locale/gl/LC_MESSAGES/deluge.mo
share/locale/he/LC_MESSAGES/deluge.mo
share/locale/hi/LC_MESSAGES/deluge.mo
share/locale/hr/LC_MESSAGES/deluge.mo
share/locale/hu/LC_MESSAGES/deluge.mo
share/locale/id/LC_MESSAGES/deluge.mo
share/locale/is/LC_MESSAGES/deluge.mo
share/locale/it/LC_MESSAGES/deluge.mo
share/locale/iu/LC_MESSAGES/deluge.mo
share/locale/ja/LC_MESSAGES/deluge.mo
share/locale/ka/LC_MESSAGES/deluge.mo
share/locale/ko/LC_MESSAGES/deluge.mo
share/locale/ku/LC_MESSAGES/deluge.mo
share/locale/la/LC_MESSAGES/deluge.mo
share/locale/lt/LC_MESSAGES/deluge.mo
share/locale/lv/LC_MESSAGES/deluge.mo
share/locale/mk/LC_MESSAGES/deluge.mo
share/locale/ms/LC_MESSAGES/deluge.mo
share/locale/nb/LC_MESSAGES/deluge.mo
share/locale/nds/LC_MESSAGES/deluge.mo
share/locale/nl/LC_MESSAGES/deluge.mo
share/locale/pl/LC_MESSAGES/deluge.mo
share/locale/pms/LC_MESSAGES/deluge.mo
share/locale/pt/LC_MESSAGES/deluge.mo
share/locale/pt_BR/LC_MESSAGES/deluge.mo
share/locale/ro/LC_MESSAGES/deluge.mo
share/locale/ru/LC_MESSAGES/deluge.mo
share/locale/si/LC_MESSAGES/deluge.mo
share/locale/sk/LC_MESSAGES/deluge.mo
share/locale/sl/LC_MESSAGES/deluge.mo
share/locale/sr/LC_MESSAGES/deluge.mo
share/locale/sv/LC_MESSAGES/deluge.mo
share/locale/ta/LC_MESSAGES/deluge.mo
share/locale/th/LC_MESSAGES/deluge.mo
share/locale/tl/LC_MESSAGES/deluge.mo
share/locale/tlh/LC_MESSAGES/deluge.mo
share/locale/tr/LC_MESSAGES/deluge.mo
share/locale/uk/LC_MESSAGES/deluge.mo
share/locale/vi/LC_MESSAGES/deluge.mo
share/locale/zh_CN/LC_MESSAGES/deluge.mo
share/locale/zh_TW/LC_MESSAGES/deluge.mo
share/pixmaps/deluge.png
@dirrmtry share/locale/tlh/LC_MESSAGES
@dirrmtry share/locale/tlh
@dirrmtry share/locale/tl/LC_MESSAGES
@dirrmtry share/locale/tl
@dirrmtry share/locale/si/LC_MESSAGES
@dirrmtry share/locale/si
@dirrmtry share/locale/pms/LC_MESSAGES
@dirrmtry share/locale/pms
@dirrmtry share/locale/nds/LC_MESSAGES
@dirrmtry share/locale/nds
@dirrmtry share/locale/la/LC_MESSAGES
@dirrmtry share/locale/la
@dirrmtry share/locale/ku/LC_MESSAGES
@dirrmtry share/locale/ku
@dirrmtry share/locale/iu/LC_MESSAGES
@dirrmtry share/locale/iu
@dirrmtry share/locale/fy/LC_MESSAGES
@dirrmtry share/locale/fy
@dirrmtry share/locale/ast/LC_MESSAGES
@dirrmtry share/locale/ast
@dirrmtry share/icons/hicolor/256x256/apps
@dirrmtry share/icons/hicolor/256x256
%%PORTDOCS%%@dirrm %%DOCSDIR%%
@dirrm %%DATADIR%%/plugins/WebUi/tests
@dirrm %%DATADIR%%/plugins/WebUi/templates/deluge
@dirrm %%DATADIR%%/plugins/WebUi/templates/advanced/static
@dirrm %%DATADIR%%/plugins/WebUi/templates/advanced
@dirrm %%DATADIR%%/plugins/WebUi/templates
@dirrm %%DATADIR%%/plugins/WebUi/static/images/tango
@dirrm %%DATADIR%%/plugins/WebUi/static/images
@dirrm %%DATADIR%%/plugins/WebUi/static
@dirrm %%DATADIR%%/plugins/WebUi/ssl
@dirrm %%DATADIR%%/plugins/WebUi/scripts
@dirrm %%DATADIR%%/plugins/WebUi/lib/webpy022/wsgiserver
@dirrm %%DATADIR%%/plugins/WebUi/lib/webpy022
@dirrm %%DATADIR%%/plugins/WebUi/lib
@dirrm %%DATADIR%%/plugins/WebUi
@dirrm %%DATADIR%%/plugins/WebSeed
@dirrm %%DATADIR%%/plugins/TorrentPeers
@dirrm %%DATADIR%%/plugins/TorrentNotification
@dirrm %%DATADIR%%/plugins/TorrentFiles
@dirrm %%DATADIR%%/plugins/TorrentCreator
@dirrm %%DATADIR%%/plugins/SpeedLimiter
@dirrm %%DATADIR%%/plugins/Search
@dirrm %%DATADIR%%/plugins/Scheduler
@dirrm %%DATADIR%%/plugins/NetworkHealth
@dirrm %%DATADIR%%/plugins/NetworkGraph
@dirrm %%DATADIR%%/plugins/MoveTorrent
@dirrm %%DATADIR%%/plugins/FlexRSS
@dirrm %%DATADIR%%/plugins/EventLogging
@dirrm %%DATADIR%%/plugins/DesiredRatio
@dirrm %%DATADIR%%/plugins/BlocklistImport
@dirrmtry %%DATADIR%%/plugins
@dirrm %%DATADIR%%/pixmaps/flags25x15
@dirrm %%DATADIR%%/pixmaps/flags18x12
@dirrm %%DATADIR%%/pixmaps
@dirrm %%DATADIR%%/icons/scalable/apps
@dirrm %%DATADIR%%/icons/scalable
@dirrm %%DATADIR%%/icons/hicolor
@dirrm %%DATADIR%%/icons
@dirrm %%DATADIR%%/glade
@dirrmtry %%DATADIR%%
@dirrmtry share/applications
@dirrm %%PYTHON_SITELIBDIR%%/deluge
@exec %%LOCALBASE%%/bin/update-desktop-database > /dev/null || /usr/bin/true
@unexec %%LOCALBASE%%/bin/update-desktop-database > /dev/null || /usr/bin/true

View File

@ -186,7 +186,6 @@
SUBDIR += gladtex
SUBDIR += glark
SUBDIR += glimpse
SUBDIR += gmat
SUBDIR += gmetadom
SUBDIR += gnome-doc-utils
SUBDIR += gnome-spell

View File

@ -1,68 +0,0 @@
# ports collection makefile for: gmat
# Date created: 31 December 2000
# Whom: grog
#
# $FreeBSD$
#
PORTNAME= gmat
PORTVERSION= 0.2.4c
PORTREVISION= 2
CATEGORIES= textproc
MASTER_SITES= ftp://ftp.ora.com/pub/gmat/
MAINTAINER= ports@FreeBSD.org
COMMENT= O'Reilly's SGML formatting package
RUN_DEPENDS= nsgmls:${PORTSDIR}/textproc/jade \
${LOCALBASE}/bin/procmail:${PORTSDIR}/mail/procmail \
docbook<2:${PORTSDIR}/textproc/docbook \
${LOCALBASE}/share/sgml/iso12083/book.dtd:${PORTSDIR}/textproc/iso12083 \
gv:${PORTSDIR}/print/gv
USE_PERL5_BUILD=yes
REINPLACE_ARGS= -i ""
BROKEN= this port needs a larger cleanup
DEPRECATED= failed to build for a long time, no maintainer and apparently no users either
EXPIRATION_DATE=2009-06-03
WRKSRC= ${WRKDIR}/${PORTNAME}-0.2.4
MAKE_ARGS= CC="${CC}" PRODROOT="${DATADIR}" SOELIMPATHNAME="/usr/bin/soelim"
SUB_FILES= pkg-message
PORTDOCS= README gmat.sgm
DTDVER?= 4.2 # docbook-xml version
post-patch:
@${RM} ${WRKSRC}/src/crlf/crlf.o ${WRKSRC}/src/crlf/crlf ${WRKSRC}/bin/gmat.troff.orig
pre-build:
# Change the pathnames in CATALOG & BOOKFILES
.for RP in /usr/local/prod %%PRODROOT%%
${REINPLACE_CMD} -e "s|${RP}/sgml/ISO_12083-1993/dtds|${LOCALBASE}/share/sgml/iso12083|" \
-e "s|${RP}/sgml/Davenport/dtds|${LOCALBASE}/share/sgml/docbook|" \
-e "s|${RP}/sgml/DocBook-XML/iso|${LOCALBASE}/share/xml/docbook/${DTDVER}/ent/iso|" \
-e "s|${RP}/sgml/DocBook-XML|${LOCALBASE}/share/xml/docbook/${DTDVER}|" \
-e "s|${RP}/sgml/DocBook|${LOCALBASE}/share/sgml/docbook|" \
${WRKSRC}/test/CATALOG ${WRKSRC}/sgml/CATALOG
.endfor
.for FILE in BOOKFILES CATALOG
${REINPLACE_CMD} -e "s|/usr/local/prod|${DATADIR}|" ${WRKSRC}/test/${FILE}
.endfor
.for FILE in checkaheads kern10sed kern10sed0 kern10sed1
${CHMOD} a+x ${WRKSRC}/bin/${FILE}
.endfor
${REINPLACE_CMD} -e "s|/usr/local|${PREFIX}|" ${WRKSRC}/Makefile
post-install:
@${STRIP_CMD} ${PREFIX}/bin/crlf
(cd ${WRKSRC}; tar cf - test) | (cd ${DATADIR}; tar xvf -)
${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${DATADIR}
.if !defined(NOPORTDOCS)
${MKDIR} ${DOCSDIR}
${INSTALL_DATA} ${PORTDOCS:S|^|${WRKSRC}/|} ${DOCSDIR}
.endif
@${CAT} ${PKGMESSAGE}
.include <bsd.port.mk>

View File

@ -1,3 +0,0 @@
MD5 (gmat-0.2.4c.tar.gz) = 184ba95d13d2a66c704ca7bb8586db7a
SHA256 (gmat-0.2.4c.tar.gz) = a421c2f2d50b7706a635f4a5dae4178db805c4707d323529dd82e8a696c8c2aa
SIZE (gmat-0.2.4c.tar.gz) = 332704

View File

@ -1,28 +0,0 @@
--- lib/oratoolsrc Thu Sep 7 00:48:19 2000
+++ lib/oratoolsrc.new Thu Jan 11 12:05:38 2001
@@ -58,9 +58,9 @@
action = view
-tbl = gtbl
-pic = gpic
-eqn = geqn
+tbl = tbl
+pic = pic
+eqn = eqn
tbl_opts = -
pic_opts = -
@@ -94,9 +94,9 @@
comment = This is really gmat.old
action = view
-tbl = gtbl
-pic = gpic
-eqn = geqn
+tbl = tbl
+pic = pic
+eqn = eqn
tbl_opts = -
pic_opts = -

View File

@ -1,617 +0,0 @@
--- gmat.sgm.orig Thu Jan 1 09:30:00 1970
+++ gmat.sgm Sun Jan 7 12:44:25 2001
@@ -0,0 +1,614 @@
+<!-- $Id: gmat.sgm 1.2 1994/08/29 17:53:27 norm Exp $ -->
+
+<chapter id=gmat><title>gmat</>
+
+<sect1><title>Usage</>
+
+<para>
+Usage: <command>gmat</> [switches] filename { [[switches] filename] }
+&hellip;
+</para>
+
+</sect1>
+<sect1><title>Description</>
+
+<para>
+<command>gmat</> handles the routine processing of text documents into
+printed or previewed output. Beginning with one or more input files (in
+a formatting language like troff or TeX; or in SGML), <command>gmat</>
+performs any necessary preprocessing (e.g. construction of an
+<acronym>SGML</acronym> driver file), executes the appropriate
+formatter, and previews or prints the resulting output file (generally
+PostScript).
+</para>
+
+<para>
+Most aspects of <command>gmat</> are configurable through command line
+switches and/or configuration files. <command>gmat</> reads two
+configuration files: the <filename>oratoolsrc</> file and the
+<filename>bookfiles</> file.
+</para>
+
+<para>
+The following command line switches are available:
+
+<variablelist>
+ <varlistentry><term><option>&ndash;d</></term>
+ <listitem><para>
+ Enable debugging. If the <option>&ndash;d</option> switch is used,
+ temporary files
+ created by <command>gmat</> are not deleted when <command>gmat</>
+ ends.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;f</></term>
+ <listitem><para>
+ Keep the output file. If the <option>&ndash;f</option> switch is used,
+ the output file
+ is not deleted after previewing or printing. Ordinarily,
+ <command>gmat</> treats the output file as a temporary file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;F</> <replaceable>file</></term>
+ <listitem><para>
+ Specify the name of the output file. The name of the output file
+ is controlled by the <filename>oratoolsrc</> variable
+ <literal>PS_BASE</> if the <option>&ndash;F</> option is not used.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;k</></term>
+ <listitem><para>
+ Keep the formatter input file. The <option>&ndash;k</> option is only meaningful
+ when <acronym>SGML</acronym> files are being processed by
+ <command>gmat</>. The <acronym>SGML</acronym> file is
+ automatically translated into a formatter input file; if the <option>&ndash;k</>
+ option isn't used, <command>gmat</> treats the output file as a
+ temporary file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;K</> <replaceable>file</></term>
+ <listitem><para>
+ Specify the name of the formatter input file. The name of the
+ formatter input file is controlled by the <filename>oratoolsrc</> variables
+ <literal>EXT_BASE</> and <literal>EXT3L</> if the <option>&ndash;K</> option isn't used.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;o</> <replaceable>pages</></term>
+ <listitem><para>
+ Specify a list of pages. Only the pages specified will appear in
+ the output file. Pages are specified by page number. By default,
+ all of the pages in the formatter input file will appear in the
+ output file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;p</></term>
+ <listitem><para>
+ Print the output file. Selection of the output action is
+ controlled by the <option>&ndash;p</> and <option>&ndash;v</> options and the <filename>oratoolsrc</>
+ variable <literal>ACTION</>. If the <option>&ndash;p</> option is used, the file will be
+ printed regardless of the action specified by the <filename>oratoolsrc</>
+ variable <literal>ACTION</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;P</> <replaceable>printer</></term>
+ <listitem><para>
+ Select printer. Output will be sent to the printer specified. If
+ the <option>&ndash;P</> option is not used, output will be sent to the printer
+ specified by the <filename>oratoolsrc</> variable <literal>PRINTER</>. This option has
+ no meaning if the output file is not printed (e.g. if the
+ previewer is used instead). Selection of the output action is
+ controlled by the <option>&ndash;p</> and <option>&ndash;v</> options and the <filename>oratoolsrc</>
+ variable <literal>ACTION</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;q</></term>
+ <listitem><para>
+ Suppress warning messages. The ``verbosity'' of messages is
+ controlled by the <filename>oratoolsrc</> variables <literal>QUIET</> and <literal>VERBOSE</> and
+ the <option>&ndash;q</> option.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;s</></term>
+ <listitem><para>
+ Save the <acronym>SGML</acronym> driver file. If the <option>&ndash;s</> option
+ is not used, <command>gmat</> treats the <acronym>SGML</acronym>
+ driver file (containing the &lt;!DOCTYPE&gt; declaration and the
+ locally defined entities) as a temporary file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;S</></term>
+ <listitem><para>
+ Don't merge multiple <acronym>SGML</acronym> files together with
+ an <acronym>SGML</acronym> driver file. If the <option>&ndash;S</> option is
+ used, <command>gmat</> does not build a driver file. Each
+ <acronym>SGML</acronym> file must contain it's own &lt;DOCTYPE&gt;
+ specification. When multiple <acronym>SGML</acronym> files are
+ given on the command line, <command>gmat</> ordinarily merges them
+ together in the <acronym>SGML</acronym> driver. If the <option>&ndash;S</>
+ option is specified, each file is processed individually.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;T</> <replaceable>progname</></term>
+ <listitem><para>
+ Process the formatter input file with the specified program. This
+ option is not implemented yet. Ultimately, it will allow
+ <command>gmat</> to handle arbitrary document formatters instead
+ of just gtroff.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;v</></term>
+ <listitem><para>
+ Preview the output file. Selection of the output action is
+ controlled by the <option>&ndash;p</> and <option>&ndash;v</> options and the <filename>oratoolsrc</>
+ variable <literal>ACTION</>. If the <option>&ndash;v</> option is used, the file will be
+ previewed regardless of the action specified by the <filename>oratoolsrc</>
+ variable <literal>ACTION</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;W</></term>
+ <listitem><para>
+ Wait on error. If <command>gmat</> detects a user error (such as
+ an invalid option) it prints an error message and ends. If the
+ <option>&ndash;W</> option is specified, it also waits for the user to press
+ Enter. This option is useful if <command>gmat</> is executed by
+ shell script or batch file and subsequent processing might cause
+ the error message to scroll off of the screen before it could be
+ read or even noticed.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term><option>&ndash;x</></term>
+ <listitem><para>
+ Just check for errors. If the <option>&ndash;x</> option is specified,
+ <command>gmat</> does not preview or print the output file.
+ </para></listitem>
+ </varlistentry>
+</variablelist>
+</para>
+
+<para>
+The <filename>oratoolsrc</> file provides another way to customize
+<command>gmat</>. <command>gmat</> loads each of the following
+<filename>oratoolsrc</> files if they exist: the system default file, the user
+default file, and the <filename>oratoolsrc</> file in the current directory. If a
+variable is set in more than one file, the value in the most recently
+loaded file is the value that <command>gmat</> uses.
+</para>
+
+<para>
+The system default file is <filename>oratoolsrc</>. The location of the system
+default file is controlled by the environment variable <systemitem class=environvar>ORALIBDIR</>. If
+<systemitem class=environvar>ORALIBDIR</> is not set, the value <filename>/usr/local/prod/lib</> is used. The
+user default file is $HOME/.oratoolsrc. The <filename>oratoolsrc</> file in the
+current directory is <filename>.oratoolsrc</>.
+</para>
+
+<para>
+The following variables are recognized by <command>gmat</> in the <literal>GMAT</>
+or global sections of the <filename>oratoolsrc</> configuration file.
+
+<variablelist>
+ <varlistentry><term>action (view, print, check, file)</term>
+ <listitem><para>
+ Output file processing. Valid values are view (equivalent to the
+ <option>&ndash;v</> option), print (equivalent to the <option>&ndash;p</> option), check
+ (equivalent to the <option>&ndash;x</> option), and file (equivalent to the <option>&ndash;f</>
+ option).
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>bindir dir</term>
+ <listitem><para>
+ Additional <systemitem class=environvar>PATH</> directory. <command>gmat</> adds the specified
+ directory to the <systemitem class=environvar>PATH</> environment variable before running
+ subprocesses. This variable allows the installer to place
+ <command>gmat</> in a standard place (e.g. <filename>/usr/local/bin</>) but
+ leave the rest of the executables somewhere else without requiring
+ that every user update their <systemitem class=environvar>PATH</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>bookfiles filename</term>
+ <listitem><para>
+ Name of the <filename>bookfiles</> file. The <filename>bookfiles</> file is a
+ configuration file for a particular book. This variable should be
+ a simple filename (e.g. <filename>BOOKFILES</>) and not a path name.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>debug boolean</term>
+ <listitem><para>
+ Enable debugging? Enabling this variable is equivalent to using
+ the <option>&ndash;d</> option.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>debugdir dir</term>
+ <listitem><para>
+ Directory for temporary files. Temporary files are generally
+ placed in <filename>/tmp</>, but if this variable is set they are stored in
+ the directory specified. Temporary files are automatically
+ deleted when <command>gmat</> ends unless debugging is enabled.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>entity_file filename { filename &hellip; }</term>
+ <listitem><para>
+ Local entities for the &lt;DOCTYPE&gt; declaration. This is used
+ only if <literal>entities</> is not set in the <filename>BOOKFILES</>
+ file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>eqn progname</term>
+ <listitem><para>
+ The <command>eqn</> preprocessor to use for gtroff files.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>eqn_opts any</term>
+ <listitem><para>
+ Options for <command>eqn</>
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>extension_3l ext</term>
+ <listitem><para>
+ The default extension for formatter input files.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>ext_base rule</term>
+ <listitem><para>
+ The rule for constructing the base filename for the formatter
+ input file. See below.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>gsoelim progname</term>
+ <listitem><para>
+ The <command>gsoelim</> preprocessor to use for gtroff files.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>keep3l boolean</term>
+ <listitem><para>
+ Keep the formatter input file?
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>macrodir dir</term>
+ <listitem><para>
+ Directory where local macro files are kept. This value should be a
+ path relative to the current directory, for example <filename>./macros</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>pic progname</term>
+ <listitem><para>
+ The <command>pic</> preprocessor to use for gtroff files.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>pic_opts any</term>
+ <listitem><para>
+ Options for <command>pic</>
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>printer printer</term>
+ <listitem><para>
+ Name of the default printer.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>ps_base rule</term>
+ <listitem><para>
+ The rule for constructing the base filename for the output file.
+ See below.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>quiet</term>
+ <listitem><para>
+ Suppress warning messages?
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>scriptdir dir</term>
+ <listitem><para>
+ Directory where local scripts are kept. This value should be a
+ path relative to the current directory, for example <filename>./scripts</>.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>seddir dir</term>
+ <listitem><para>
+ Directory where <command>sed</> scripts are kept.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>sgmlto3l progname</term>
+ <listitem><para>
+ Name of the program that converts an <acronym>SGML</acronym>
+ document instance into a formatter input file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>sgml_base rule</term>
+ <listitem><para>
+ The rule for constructing the base filename for the
+ <acronym>SGML</acronym> driver file. See below.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>tbl progname</term>
+ <listitem><para>
+ The <command>tbl</> preprocessor to use for gtroff files.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>tbl_opts any</term>
+ <listitem><para>
+ Options for <command>tbl</>
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>temp_base rule</term>
+ <listitem><para>
+ The rule for constructing the base filename for temporary files.
+ See below.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>verbose boolean</term>
+ <listitem><para>
+ Print additional informatory messages?
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>wait_on_error boolean</term>
+ <listitem><para>
+ Wait on error? Enabling this variable is equivalent to using the
+ <option>&ndash;w</> switch.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>workdir dir</term>
+ <listitem><para>
+ Additional <systemitem class=environvar>PATH</> directory. <command>gmat</> adds the specified
+ directory to the <systemitem class=environvar>PATH</> environment variable before running
+ subprocesses. Obsolete?
+ </para></listitem>
+ </varlistentry>
+</variablelist>
+</para>
+
+<para>
+The following variables are recognized by
+<command>gmat</> in the <literal>GMAT</> or global sections of the <filename>bookfiles</>
+configuration file.
+
+<variablelist>
+ <varlistentry><term>doctype</term>
+ <listitem><para>
+ The &lt;DOCTYPE&gt; definition for the <acronym>SGML</acronym>
+ driver file. For example, ``book system
+ &ldquo;docbook.dtd&rdquo;''.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>sgmlto3l</term>
+ <listitem><para>
+ Name of the program that converts an <acronym>SGML</acronym>
+ document instance into a formatter input file. If this variable is
+ specfied in the <filename>bookfiles</> file, it takes precedence over the
+ value specified in the <filename>oratoolsrc</> file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>entities filename { filename &hellip; }</term>
+ <listitem><para>
+ Local entities for the &lt;DOCTYPE&gt; declaration. If this variable
+ is not set, the value of <literal>entity_file</> from the
+ <filename>oratoolsrc</> file is used.
+ </para></listitem>
+ </varlistentry>
+</variablelist>
+</para>
+
+<para>
+<command>gmat</> uses the <filename>bookfiles</> configuration
+file to identify options for each file that it processes. Several of
+these options only apply to <acronym>SGML</acronym> files and a few only
+apply to files processed with the gtroff text formatter.
+</para>
+
+<para>
+The following variables are recognized by <command>gmat</> in the
+section named by the file that is being processed (for example, the
+<filename>ch01.sgm</> section when the file <filename>ch01.sgm</> is being processed) or the
+global section of the <filename>bookfiles</> configuration file. Options that
+apply to the text formatter or text formatter input file (such as
+<literal>macros</> and <literal>scripts</>) should only be specified in the global section
+of a <filename>bookfiles</> configuration file for <acronym>SGML</acronym> files.
+Specifying options for each file does not make sense since they are all
+merged into a single driver file.
+</para>
+
+<variablelist>
+ <varlistentry><term>appendix appletter</term>
+ <listitem><para>
+ Identifies the file as an appendix and specifies its appendix
+ letter (i.e. appendix number).
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>chapter chapnum</term>
+ <listitem><para>
+ Specifies the chapter number of the file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>not_a_chapter</term>
+ <listitem><para>
+ Indicates that the file is not a chapter (or appendix). See
+ below.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>page number</term>
+ <listitem><para>
+ Specifies the starting page number for the file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>part number</term>
+ <listitem><para>
+ Identifies the part of the book that contains the file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>part<emphasis>n</>_title</term>
+ <listitem><para>
+ Specifies the title of the <emphasis>n</>'th part of the book. This
+ information may be used in page headers or footers, for example.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>pagecount number</term>
+ <listitem><para>
+ Identifies how many formatted pages occur in the file. This
+ information is used by <command>gmat</> to calculate starting page
+ numbers for files that do not have a <literal>page</> variable. It is
+ updated automatically each time <command>gmat</> processes the
+ file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>macros filenames</term>
+ <listitem><para>
+ Identifies the macro packages that should be used when the file is
+ processed. At present, this option only applies to files
+ processed with gtroff.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>page number</term>
+ <listitem><para>
+ Identifies the starting page of the file.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>scripts prognames</term>
+ <listitem><para>
+ A list of scripts that should be used to preprocess the text
+ formatter input file. Each script must be a filter (accepting
+ input on <filename>stdin</> and writing output to <filename>stdout</>. The first filter
+ will recieve the formatter input file as input and the output of
+ the last filter will become the new formatter input.
+ </para></listitem>
+ </varlistentry>
+ <varlistentry><term>wraptag</term>
+ <listitem><para>
+ When <command>gmat</> creates an <acronym>SGML</acronym> driver
+ file, it inserts the specified tag around the contents of the
+ files that are processed.
+ </para></listitem>
+ </varlistentry>
+</variablelist>
+
+</sect1>
+<sect1><title>Rules</>
+
+<para>
+The values of the <literal>ext_base</>, <literal>sgml_base</>, <literal>ps_base</>, and <literal>temp_base</>
+variables are interpreted as filenames with the following extensions. In
+order to make it possible for more than one person to work in the same
+directory at the same time (or for one person to run several concurrent
+<command>gmat</>s), it is neessary to specify that the temporary files
+have different names. <command>gmat</> accomplishes this by allowing
+you to use the special strings ``$WHOAMI'' and``$PID'' in the value for
+each of these variables. In addition, you can use the string
+``$BASEFILE'' to refer to the base name of the file that
+<command>gmat</> is processing.
+</para>
+
+<para>
+For example, if ``norm'' processes ``<filename>myfile.tr</>'' with <literal>ps_base</> set
+to ``$BASEFILE-$WHOAMI.$PID.ps'' and <command>gmat</> happens to be
+process number 3142, the ouput file produced by <command>gmat</> would
+be ``<filename>myfile-norm.3142.ps</>''.
+</para>
+
+</sect1>
+<sect1><title>Chapter and Appendix Numbering</>
+
+<para>
+<command>gmat</> assumes that the sections in the <filename>bookfiles</>
+configuration file identify the chapters of a book. When files are
+listed on the command line, they are reordered into the order that they
+appear in the bookfiles file before processing. <command>gmat</>
+determines the chapter or appendix number of each chapter and the
+starting page number of each chapter by examining the <literal>chapter</>,
+<literal>appendix</>, <literal>page</>, and <literal>pagecount</> variables for each file. If a given
+file does not have a <literal>chapter</> variable, it is assumed to have a number
+one greater than the previous chapter. <command>gmat</> does not
+increment the chapter count when it processes a section that has the
+<literal>not_a_chapter</> variable set. After the first appendix has been
+encountered, <command>gmat</> begins enumerating chapters with letters
+rather than numbers.
+</para>
+
+</sect1>
+<sect1><title>Handling <filename>BOOKFILES</></title>
+
+<para>
+The <filename>bookfiles</> file is <emphasis>always</> read only. You must not
+edit the file by hand. Because <command>gmat</> updates the file each
+time it processes a document, any changes that you introduce while
+<command>gmat</> is running will potentially be lost.
+</para>
+
+<para>
+Always use the <command>bookfiles</> program to update the <filename>bookfiles</>
+configuration file.
+</para>
+
+</sect1>
+<sect1><title>Formating A Document</>
+
+<para>
+When formatting a non-SGML document, <command>gmat</> reads the command
+line switches and filenames and verifies that they are correct. If all
+of the switches are valid, <command>gmat</> checks that each filename
+specified exists and that the most recent <acronym>RCS</acronym>
+version has been checked out (if applicable).
+</para>
+
+<para>
+Each filename in turn is passed through the text formatter and the
+output file is processed as requested.
+</para>
+
+<para>
+If switches are used before the first filename, the results of those
+switches become the default behavior for the rest of the files specified
+on the command line.
+</para>
+
+</sect1>
+<sect1><title>Formating an SGML Document</>
+
+<para>
+Formating and <acronym>SGML</acronym> document is slightly more
+complicated than formating a text document. If all of the filenames
+listed on the command line end in <filename>.sgm</> or <filename>.sgml</>, <command>gmat</>
+assumes that the files are SGML. Unless the <option>&ndash;S</> switch is used,
+<command>gmat</> will attempt to create a single driver file to process
+all of the specified files simultaneously. The general format of the
+driver file that <command>gmat</> produces is:
+</para>
+
+<screen>
+&lt;!DOCTYPE *doctype* [
+&lt;!ENTITY file1.sgm SYSTEM "file1.sgm"&gt;
+&lt;!ENTITY file2.sgm SYSTEM "file2.sgm"&gt;
+&lt;!ENTITY file3.sgm SYSTEM "file3.sgm"&gt;
+*local entities*
+*wraptag*
+&lt;?gmat-file "file1.3l"&gt;
+&lt;?gmat-part "part title"&gt;
+&lt;?gmat-chapter-number "1"&gt;
+&lt;?gmat-page-number "1"&gt;
+&amp;file1.sgm;
+&lt;?gmat-file "file2.3l"&gt;
+&lt;?gmat-part "part title"&gt;
+&lt;?gmat-chapter-number "2"&gt;
+&lt;?gmat-page-number "17"&gt;
+&amp;file2.sgm;
+&lt;?gmat-file "file3.3l"&gt;
+&lt;?gmat-part "part title"&gt;
+&lt;?gmat-chapter-number "3"&gt;
+&lt;?gmat-page-number "23"&gt;
+&amp;file3.sgm;
+*/wraptag*
+</screen>
+
+<para>
+The files are arranged in the order that they appear in the <filename>bookfiles</>
+configuration file regardless of the order specified on the command
+line.
+</para>
+
+</sect1>
+</chapter>
+<?troff .BLANK>
+
+<!-- Keep this comment at the end of the file
+Local variables:
+mode: sgml
+sgml-default-dtd-file: "oraprod.ced"
+End:
+-->

View File

@ -1,11 +0,0 @@
--- macros/tmac.G.orig Mon Mar 19 14:29:40 2001
+++ macros/tmac.G Tue Dec 7 21:31:06 2004
@@ -25,7 +25,7 @@
.ds gmat_gmacroff %%BINDIR%%/gmacroff
.\" DEFINE THE FOLLOWING paths for your local environment!
.ds gmat_echo /bin/echo
-.ds gmat_sed /bin/sed
+.ds gmat_sed /usr/bin/sed
.ds gmat_rm /bin/rm
.ds gmat_mv /bin/mv
.\" The following strings set variables to subdirectories of the book

View File

@ -1,24 +0,0 @@
--- bin/gmat.troff.orig Tue Feb 1 21:49:18 2000
+++ bin/gmat.troff Mon Dec 13 14:04:14 2004
@@ -90,7 +90,7 @@
$PS_FONT_FILE = ($ENV{"PSFONTFILE"}
|| &cfg($gmat, $PROGNAME, "ps-font-file")
- || "/usr/local/lib/groff/font/devps/download");
+ || "/usr/share/groff_font/devps");
############################################################################
# Let's get to work, process each file with its options
@@ -519,10 +519,10 @@
# HANDLE RETURN CODE!
} elsif ($preview) {
print STDERR "Previewing $file.\n" if $VERBOSE;
- print COMMANDS "ghostview $grops_temp\n";
+ print COMMANDS "gv $grops_temp\n";
close (COMMANDS); # so that you can see what's in there
# when the preview window is up...
- system "ghostview $grops_temp";
+ system "gv $grops_temp";
# HANDLE RETURN CODE!
} elsif ($checkonly) {
print STDERR "Checking completed.\n" if $VERBOSE;

View File

@ -1,8 +0,0 @@
===============================================================================
To use the programs in this package, add the path
%%DATADIR%%/bin to your PATH environment variable.
Then, type
gmat --job %%DATADIR%%/test/BOOKFILES %%DOCSDIR%%/gmat.sgm
to format the documentation.
===============================================================================

View File

@ -1,21 +0,0 @@
O'Reilly's SGML formatting package.
This package processes the complete sources for a book in DocBook
format and formats it with groff.
This port is the first port of what was previously an internal
O'Reilly product. Consider it beta quality. The copyright
information in the README file states:
# This is ALPHA software. Permission to redistribute this alpha
# version is expressly denied.
According to Lenny Muellner <len@oreilly.com>, this is out of date,
but the archive has not yet been updated.
The only documentation is gmat.sgm. To format,
# gmat gmat.sgm
The results of the formatting are not exactly production quality.
There is still a lot of work to be done.

View File

@ -1,251 +0,0 @@
bin/crlf
%%DATADIR%%/bin/bookfiles
%%DATADIR%%/bin/bookpage
%%DATADIR%%/bin/checkaheads
%%DATADIR%%/bin/dbtohtml
%%DATADIR%%/bin/dbtohtml.cls
%%DATADIR%%/bin/dbtohtml.sup
%%DATADIR%%/bin/dbtoltx
%%DATADIR%%/bin/dbtoltx.cls
%%DATADIR%%/bin/dbtoltx.sup
%%DATADIR%%/bin/dbtotexi
%%DATADIR%%/bin/dbtotexi.cls
%%DATADIR%%/bin/dbtotexi.sup
%%DATADIR%%/bin/epsbbox
%%DATADIR%%/bin/fontstack
%%DATADIR%%/bin/gmacroff
%%DATADIR%%/bin/gmat
%%DATADIR%%/bin/gmat.cat
%%DATADIR%%/bin/gmat.driver
%%DATADIR%%/bin/gmat.latex
%%DATADIR%%/bin/gmat.nop
%%DATADIR%%/bin/gmat.sgmls
%%DATADIR%%/bin/gmat.troff
%%DATADIR%%/bin/gnct
%%DATADIR%%/bin/inx
%%DATADIR%%/bin/kern10sed
%%DATADIR%%/bin/kern10sed0
%%DATADIR%%/bin/kern10sed1
%%DATADIR%%/bin/lowres
%%DATADIR%%/bin/memototxt
%%DATADIR%%/bin/memototxt.cls
%%DATADIR%%/bin/memototxt.sup
%%DATADIR%%/bin/rcs-lock-list
%%DATADIR%%/bin/rcsvdate
%%DATADIR%%/bin/sgml-checkindex
%%DATADIR%%/bin/sgml-fixindex
%%DATADIR%%/bin/sgmlfiglist
%%DATADIR%%/bin/tbltodb
%%DATADIR%%/bin/wraplines
%%DATADIR%%/bin/xdbto3l
%%DATADIR%%/bin/xdbto3l.cls
%%DATADIR%%/bin/xdbto3l.sup
%%DATADIR%%/bin/yadc-strings
%%DATADIR%%/lib/commonlock5.pl
%%DATADIR%%/lib/dbtohtml.ent
%%DATADIR%%/lib/dbtohtml.tag
%%DATADIR%%/lib/dbtoltx.tag
%%DATADIR%%/lib/dbtortf.tag
%%DATADIR%%/lib/dbtotexi.ent
%%DATADIR%%/lib/dbtotexi.tag
%%DATADIR%%/lib/gmat.pl
%%DATADIR%%/lib/html.mkp
%%DATADIR%%/lib/inx.preamble
%%DATADIR%%/lib/longopts5.pl
%%DATADIR%%/lib/memototxt.tag
%%DATADIR%%/lib/oragetopts.pl
%%DATADIR%%/lib/oratoolsrc
%%DATADIR%%/lib/oratoolsrc.orig
%%DATADIR%%/lib/parsecfg5.pl
%%DATADIR%%/lib/psgmls.pl
%%DATADIR%%/lib/sgmlesis.pl
%%DATADIR%%/lib/sgmlpars.pl
%%DATADIR%%/lib/sgmls3l.pl
%%DATADIR%%/lib/sparser.pl
%%DATADIR%%/lib/xdbto3l.ent
%%DATADIR%%/lib/xdbto3l.tag
%%DATADIR%%/macros/sgmlmacs
%%DATADIR%%/macros/tmac.G
%%DATADIR%%/macros/tmac.G.orig
%%DATADIR%%/macros/tmac.Gdraft
%%DATADIR%%/macros/tmac.Ginanut
%%DATADIR%%/macros/tmac.Ginit
%%DATADIR%%/macros/tmac.gs
%%DATADIR%%/macros/tmac.paras
%%DATADIR%%/macros/tmac.sgmlmacs
%%DATADIR%%/sed/gcleanup-d.sed
%%DATADIR%%/sed/gcleanup.sed
%%DATADIR%%/sed/gcleanup.sed.gr
%%DATADIR%%/sgml/CATALOG
%%DATADIR%%/sgml/ECAT
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Latin_1
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Latin_2
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Arrow_Relations
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Binary_Operators
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Delimiters
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Negated_Relations
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Ordinary
%%DATADIR%%/sgml/ISO_8879-1986/entities/Added_Math_Symbols_Relations
%%DATADIR%%/sgml/ISO_8879-1986/entities/Alternative_Greek_Symbols
%%DATADIR%%/sgml/ISO_8879-1986/entities/Box_and_Line_Drawing
%%DATADIR%%/sgml/ISO_8879-1986/entities/Diacritical_Marks
%%DATADIR%%/sgml/ISO_8879-1986/entities/General_Technical
%%DATADIR%%/sgml/ISO_8879-1986/entities/Greek_Letters
%%DATADIR%%/sgml/ISO_8879-1986/entities/Greek_Symbols
%%DATADIR%%/sgml/ISO_8879-1986/entities/Monotoniko_Greek
%%DATADIR%%/sgml/ISO_8879-1986/entities/Non-Russian_Cyrillic
%%DATADIR%%/sgml/ISO_8879-1986/entities/Numeric_and_Special_Graphic
%%DATADIR%%/sgml/ISO_8879-1986/entities/Publishing
%%DATADIR%%/sgml/ISO_8879-1986/entities/Russian_Cyrillic
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amsa.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amsb.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amsc.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amsn.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amso.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-amsr.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-box.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-cyr1.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-cyr2.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-dia.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-grk1.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-grk2.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-grk3.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-grk4.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-lat1.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-lat2.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-num.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-pub.gml
%%DATADIR%%/sgml/ISO_8879-1986/entities/iso-tech.gml
%%DATADIR%%/sgml/ISO_9573-13-1991/entities/Math_Alphabets_Fraktur
%%DATADIR%%/sgml/ISO_9573-13-1991/entities/Math_Alphabets_Open_Face
%%DATADIR%%/sgml/ISO_9573-13-1991/entities/Math_Alphabets_Script
%%DATADIR%%/sgml/ORA/dtds/memo.dtd
%%DATADIR%%/sgml/ORA/dtds/nutshell.1.1.dtd
%%DATADIR%%/sgml/ORA/dtds/nutshell.dtd
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