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mirror of https://git.FreeBSD.org/ports.git synced 2025-01-22 08:58:47 +00:00

Add lamarc 2001.08.06,

a package of programs for computing
population parameters.
This commit is contained in:
Johann Visagie 2001-08-07 08:17:58 +00:00
parent 758a0c32d2
commit f7b5a60b9b
Notes: svn2git 2021-03-31 03:12:20 +00:00
svn path=/head/; revision=45915
5 changed files with 42 additions and 0 deletions

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SUBDIR += grappa
SUBDIR += hmmer
SUBDIR += kinemage
SUBDIR += lamarc
SUBDIR += migrate
SUBDIR += molden
SUBDIR += mopac

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biology/lamarc/Makefile Normal file
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# New ports collection makefile for: lamarc
# Date created: 6 August 2001
# Whom: Johann Visagie <wjv@FreeBSD.org>
#
# $FreeBSD$
#
PORTNAME= lamarc
PORTVERSION= 2001.08.06
CATEGORIES= biology
MASTER_SITES= # empty
DISTFILES= # none
EXTRACT_ONLY= # empty
MAINTAINER= wjv@FreeBSD.org
RUN_DEPENDS= coalesce:${PORTSDIR}/biology/coalesce \
fluctuate:${PORTSDIR}/biology/fluctuate \
migrate:${PORTSDIR}/biology/migrate \
recombine:${PORTSDIR}/biology/recombine
NO_BUILD= yes
do-install: # empty
.include <bsd.port.mk>

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A package of programs for computing population parameters

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biology/lamarc/pkg-descr Normal file
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LAMARC (Likelihood Analysis with Metropolis Algorithm using Random
Coalescence) is a package of programs for computing population parameters
such as population size, population growth rate and migration rates. It does
this by using likelihoods for samples of data (sequences, microsatellites,
and electrophoretic polymorphisms) from populations.
This port does not contain anything by itself; it is a "meta-port" which
installs the four packages that make up LAMARC: Coalesce, Fluctuate, Migrate
and Recombine.
WWW: http://evolution.genetics.washington.edu/lamarc.html
-- Johann Visagie <wjv@FreeBSD.org>

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biology/lamarc/pkg-plist Normal file
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@comment this plist intentionally left empty