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Add lamarc 2001.08.06,
a package of programs for computing population parameters.
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svn path=/head/; revision=45915
@ -18,6 +18,7 @@
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SUBDIR += grappa
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SUBDIR += hmmer
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SUBDIR += kinemage
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SUBDIR += lamarc
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SUBDIR += migrate
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SUBDIR += molden
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SUBDIR += mopac
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26
biology/lamarc/Makefile
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26
biology/lamarc/Makefile
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# New ports collection makefile for: lamarc
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# Date created: 6 August 2001
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# Whom: Johann Visagie <wjv@FreeBSD.org>
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#
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# $FreeBSD$
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#
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PORTNAME= lamarc
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PORTVERSION= 2001.08.06
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CATEGORIES= biology
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MASTER_SITES= # empty
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DISTFILES= # none
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EXTRACT_ONLY= # empty
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MAINTAINER= wjv@FreeBSD.org
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RUN_DEPENDS= coalesce:${PORTSDIR}/biology/coalesce \
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fluctuate:${PORTSDIR}/biology/fluctuate \
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migrate:${PORTSDIR}/biology/migrate \
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recombine:${PORTSDIR}/biology/recombine
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NO_BUILD= yes
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do-install: # empty
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.include <bsd.port.mk>
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1
biology/lamarc/pkg-comment
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1
biology/lamarc/pkg-comment
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A package of programs for computing population parameters
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biology/lamarc/pkg-descr
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biology/lamarc/pkg-descr
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LAMARC (Likelihood Analysis with Metropolis Algorithm using Random
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Coalescence) is a package of programs for computing population parameters
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such as population size, population growth rate and migration rates. It does
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this by using likelihoods for samples of data (sequences, microsatellites,
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and electrophoretic polymorphisms) from populations.
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This port does not contain anything by itself; it is a "meta-port" which
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installs the four packages that make up LAMARC: Coalesce, Fluctuate, Migrate
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and Recombine.
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WWW: http://evolution.genetics.washington.edu/lamarc.html
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-- Johann Visagie <wjv@FreeBSD.org>
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1
biology/lamarc/pkg-plist
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1
biology/lamarc/pkg-plist
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@comment this plist intentionally left empty
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