- Remove note of these manual actions from pkg-message
- Change mentions of /var/lib/tor to /var/db/tor in example configs and documentation
- Mention in UPDATING that if /var/log/tor _file_ was created before it should be now moved away
PR: 206235
Submitted by: amdmi3
Approved by: bf (maintainer)
After being dormant since 2013, libproxy development picked up some steam at
the end of last year, and the project moved from Google Code to GitHub,
where its releases are also being hosted. A summary of changes between 0.4.6
and 0.4.12 can be found here:
https://github.com/libproxy/libproxy/blob/0.4.12/NEWS
The libproxy ports themselves have undergone several changes too:
* net/libproxy
- Drop a lot of patches that are no longer necessary.
- Add a few patches that I have sent upstream, and add some context to the
0.4.6 patches that are still required.
- Explicitly disable a few build options (.NET bindings, for example).
- Switch to an out-of-source CMake build (also applies to the slave
ports).
- Drop the unnecessary post-install target, likely added before pkg and
our ports system got smart enough to remove directories when needed.
* net/libproxy-gnome
- Explicitly add dependency on devel/glib20 as the code links against
GObject.
- Make it clear that this plug-in targets GNOME2 desktops and uses GConf
to read proxy settings.
* net/libproxy-gnome3
- New port. Similar to libproxy-gnome, but targets GNOME3/Mate and reads
proxy settings via GSettings instead. libproxy-gnome retained its name
to avoid confusing users and requiring instructions in UPDATING.
* net/libproxy-kde
- The KDE configuration plug-in has been rewritten upstream and no longer
links against Qt or any KDE libraries. Instead, it just has a run-time
dependency on either kreadconfig (from KDE4) or kreadconfig5 (from KDE
Frameworks 5).
* net/libproxy-mozjs
- Resurrect the port; the plug-in has been rewritten and now uses
lang/spidermonkey185 to parse the JavaScript in .pac files.
* net/libproxy-webkit
- Switch to depending www/webkit-gtk3 instead of www/webkit-gtk2. In
practice, there is no huge difference since libproxy only uses the
JavaScriptCore layer (which is toolkit-independent) to parse .pac files.
Finally, thanks to mat@ for answering some questions about libproxy-perl and
which Perl patches still needed to be retained or rewritten.
Approved by: gnome (kwm)
In preparation for updating the libproxy ports to 0.4.12, first land some
changes that also apply to 0.4.6 and can be MFH'ed.
- Make net/libproxy a run-time dependency: we only install .py files in this
port, and they only load libproxy.so when being run. Consequently, also set
NO_ARCH=yes.
- Set NO_BUILD=yes and modernize the installation. Instead of having an empty
do-build target and invoking Python's compileall.py in post-build, do it like
most other ports and call it in post-install (this requires guarding the
post-install target in net/libproxy's Makefile).
We also pass -d to compileall.py to avoid having ${STAGEDIR} in the .pyc and
.pyo files (and shown in exception tracebacks).
- Let the port handle installation instead of defining do-install. We just need
to set INSTALL_WRKSRC appropriately to avoid installing more files than we
want.
Approved by: gnome (kwm)
genomics analysis tasks. The most widely-used of these tools enable genome
arithmetic, i.e., set theory on the genome. For example, with bedtools one
can intersect, merge, count, complement, and shuffle genomic intervals from
multiple files in common genomic formats such as BAM, BED, GFF/GTF, and VCF.
Although each individual utility is designed to do a relatively simple task,
e.g., intersect two interval files, more sophisticated analyses can be
conducted by stringing together multiple bedtools operations on the command
line or in shell scripts.
WWW: http://bedtools.readthedocs.org/
PR: 204536
Submitted by: scottcheloha@gmail.com
- Remove SPATIALITE_DESC (added to Mk/bsd.options.desc.mk)
- Use USES=localbase
- Remove -L${ICONV_PREFIX}/lib from LDFLAGS
- Use *_CONFIGURE_WITH
- Bump PORTREVISION for package change
