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Commit Graph

15 Commits

Author SHA1 Message Date
Edwin Groothuis
9c69af1094 Add conflicst:
CONFLICTS=     p5-bioperl-1.[13579]*

Submitted by:	Mauricio Herrera Cuadra <arareko@yahoo.com>,Fernan Aguero <fernan@iib.unsam.edu.ar>
2005-12-04 22:11:44 +00:00
Yen-Ming Lee
1c60fe9d1f - add missing MAN1 and MAN3
- apply DATADIR, EXAMPLESDIR, and DOCSDIR in PLIST
- update the usage of NOPORTDOCS

PR:		71322
Submitted by:	leeym
Approved by:	Fernan Aguero <fernan@iib.unsam.edu.ar>
2004-09-03 17:04:38 +00:00
Mathieu Arnold
3a7b17911b After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, all
these ports were broken because they always depended on it. I've rearranged all
the dependencies to fit the new scheme.
2004-08-12 12:48:01 +00:00
Trevor Johnson
3bca696b10 Add size data, approved by maintainers. 2004-03-18 18:01:13 +00:00
Mark Linimon
0f0f3b19d2 Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6. 2004-03-08 03:29:16 +00:00
Kris Kennaway
1850793ce0 BROKEN on 4.x: Configure fails 2004-02-22 00:06:35 +00:00
Mark Linimon
557dff9206 Major update from 0.7.2 to 1.4 by new maintainer. This is almost a complete
rework of the port.

See the page http://news.open-bio.org/archives/cat_bioperl.html for the
changes between 1.2 and 1.4.  The older changes are in the CVS tree.

From the new maintainer:

	Note that this new port just handles the installation of bioperl and
	not of additional extra stuff (bioperl-gui, bioperl-corba-server,
	bioperl-corba-client). This is unlike the behaviour of the current
	port.

	The extra stuff, though still functional, had very little adoption
	among users, and does not appear to be currently supported/maintained.

PR:		ports/47303 (and subsequent)
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
2004-01-21 08:34:33 +00:00
Ying-Chieh Liao
c634b4bb83 utilize SITE_PERL
PR:		58166
Submitted by:	Cheng-Lung Sung <clsung@dragon2.net>
2003-10-24 12:05:09 +00:00
Ade Lovett
7e52725f2a Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
2003-03-07 06:14:21 +00:00
Johann Visagie
35678fe414 - Update to version 0.7.2, somewhat overdue. :-) 2002-01-25 11:46:09 +00:00
Johann Visagie
102c91c252 - Properly list run-time dependencies in RUN_DEPENDS in Makefile.
- Deploy %%PERL_VER%% and %%PERL_ARCH%% pragmas consistently throughout
  pkg-plist.  (Ouch, that was embarrassing.)
- Bump PORTREVISION due to the above.
- Update my email address and the project's URL in pkg-descr.
2001-08-13 10:26:44 +00:00
Johann Visagie
b4e642da75 - Update to version 0.7.1
- Add a build-time message to inform the user of available options.
2001-07-04 13:22:13 +00:00
Johann Visagie
4ff56da9dd Embarrassingly long overdue update to 0.7.0, including optional support for
GUI (Tk) and CORBA extensions.
2001-06-26 15:09:39 +00:00
James E. Housley
f35e729498 Update to version 0.6.2
PR:		21954
Submitted by:	Johann Visagie <johann@egenetics.com> MAINTAINER
2000-10-13 12:43:24 +00:00
Neil Blakey-Milner
4634742f54 Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics
PR:		ports/20252
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-28 14:06:03 +00:00