Ying-Chieh Liao
384048cae5
reimport biology/genpak
2001-02-28 02:46:51 +00:00
Ying-Chieh Liao
d87d30e484
module name conflict with print/gp, so remove it and I'll reimport it again
2001-02-28 02:43:22 +00:00
Ying-Chieh Liao
ca27237a16
add gp
...
GP is a set of small utilities to manipulate DNA sequences
2001-02-27 17:22:29 +00:00
James E. Housley
a3686c5ead
- New port: biology/fasta3, which comprises the FASTA3 suite of DNA and
...
protein sequence search programs
- FASTA3 updates only some of the elements of FASTA2, which is why I have
submitted ports of both versions (as biology/fasta and biology/fasta3)
PR: 24716
Submitted by: Johann Visagie <johann@egenetics.com>
2001-02-11 16:28:59 +00:00
James E. Housley
c82fc94311
New port: biology/fasta, the FASTA2 suite of DNA and protein sequence
...
search tools
PR: 24715
Submitted by: Johann Visagie <johann@egenetics.com>
2001-02-11 16:24:18 +00:00
FUJISHIMA Satsuki
d705c4a51d
add gaussian98, an ab-initio molecular orbital calculation program.
...
PR: 23577
Submitted by: NAKATA, Maho <chat95@mbox.kyoto-inet.or.jp>
2001-02-10 19:38:20 +00:00
James E. Housley
72c15a6ba2
New Port: biology/ncbi-toolkit
...
National Center for Biotechnology Information (NCBI) Development Toolkit.
PR: 22388
Submitted by: Tony Maher <tony.maher@ebioinformatics.com>
2000-10-29 13:56:24 +00:00
James E. Housley
1bc69d7e0c
Initial import of fastDNAml Version 1.2.2
...
The faster variant of DNAML, makes phylogenetic trees using maximum likelihood
PR: 21931
Submitted by: Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
2000-10-12 12:31:13 +00:00
James E. Housley
1703717285
Initial import of biology/biojava
...
PR: 21678
Submitted by: Brad Chapman <chapmanb@arches.uga.edu>
2000-10-10 11:14:03 +00:00
James E. Housley
5f2cf6a3fd
This is nab (nucleic acid builder), a language for macromolecules
...
PR: 21585
Submitted by: M. L. Dodson <bdodson@scms.utmb.EDU>
2000-10-10 02:56:57 +00:00
Neil Blakey-Milner
ed9505e0ad
Add emboss, the European Molecular Biology Open Software Suite
...
PR: ports/20317
Submitted by: Johann Visagie <johann@egenetics.com>
2000-07-31 19:13:54 +00:00
Neil Blakey-Milner
7c7638c998
Add py-biopython, is a collection of Python packages and modules created
...
by the Biopython Project, intended to provide the basis for building
bioinformatics applications in the Python language.
PR: ports/20260
Submitted by: Johann Visagie <johann@egenetics.com>
2000-07-31 12:12:24 +00:00
Neil Blakey-Milner
4634742f54
Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics
...
PR: ports/20252
Submitted by: Johann Visagie <johann@egenetics.com>
2000-07-28 14:06:03 +00:00
Neil Blakey-Milner
167641b4f4
Add p5-AcePerl, a perl interface to the ACEDB genome database system
...
PR: ports/20223
Submitted by: Johann Visagie <johann@egenetics.com>
2000-07-28 13:16:10 +00:00
Neil Blakey-Milner
7fb6a7b182
Add sim4, an implementation of the sim4 algorithm for aligning expressed
...
DNA with genomic sequences
PR: ports/20219
Submitted by: Johann Visagie <johann@egenetics.com>
2000-07-27 14:33:00 +00:00
Alexander Langer
7d609004d5
Add xdrawchem 0.82 - a program for drawing molecules
2000-07-19 13:23:02 +00:00
Steve Price
fdc60854fd
Activating the chemeq, clustalw, paml, and phylip ports.
2000-07-10 03:26:57 +00:00
Satoshi Taoka
a6ade68cd4
Added gperiodic and xmolwt
1999-09-06 20:09:12 +00:00
David E. O'Brien
fe1e09a6cc
Change Id->FreeBSD.
1999-08-25 04:58:03 +00:00
Satoshi Taoka
a7634e3e23
Added deft and ortep3
1999-05-19 13:38:46 +00:00
Satoshi Taoka
7e4a643ed1
Add platon and molden
1999-05-07 06:59:25 +00:00
Satoshi Taoka
9674eb1cb0
Add mopac and psi88 (Move mopac and psi88 from misc to biology)
1999-05-06 08:18:35 +00:00
Joseph Koshy
3b87bc1ac4
Activate tinker.
1998-11-17 04:54:28 +00:00
Steve Price
1a8f3a68f5
Turn on hmmer.
1998-07-12 23:30:50 +00:00
Vanilla I. Shu
e1870a74df
Activate povchem.
1998-03-16 07:01:32 +00:00
Justin M. Seger
587c07e3f0
Activate kinemage
1998-01-29 17:25:59 +00:00
Vanilla I. Shu
94da48e798
Activate seaview.
1997-12-21 22:05:43 +00:00
Vanilla I. Shu
862cbba9c7
Activate babel.
1997-12-21 21:58:57 +00:00
Vanilla I. Shu
c5d1290f89
Activate rasmol.
1997-12-15 17:47:41 +00:00
Satoshi Asami
07eba866f1
The new ports category "biology" starts here today. No Darwin
...
jokes please!
1997-12-13 05:54:24 +00:00
