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Commit Graph

23 Commits

Author SHA1 Message Date
James E. Housley
1bc69d7e0c Initial import of fastDNAml Version 1.2.2
The faster variant of DNAML, makes phylogenetic trees using maximum likelihood

PR:		21931
Submitted by:	Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
2000-10-12 12:31:13 +00:00
James E. Housley
1703717285 Initial import of biology/biojava
PR:		21678
Submitted by:	Brad Chapman <chapmanb@arches.uga.edu>
2000-10-10 11:14:03 +00:00
James E. Housley
5f2cf6a3fd This is nab (nucleic acid builder), a language for macromolecules
PR:		21585
Submitted by:	M. L. Dodson <bdodson@scms.utmb.EDU>
2000-10-10 02:56:57 +00:00
Neil Blakey-Milner
ed9505e0ad Add emboss, the European Molecular Biology Open Software Suite
PR:		ports/20317
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-31 19:13:54 +00:00
Neil Blakey-Milner
7c7638c998 Add py-biopython, is a collection of Python packages and modules created
by the Biopython Project, intended to provide the basis for building
bioinformatics applications in the Python language.

PR:		ports/20260
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-31 12:12:24 +00:00
Neil Blakey-Milner
4634742f54 Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics
PR:		ports/20252
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-28 14:06:03 +00:00
Neil Blakey-Milner
167641b4f4 Add p5-AcePerl, a perl interface to the ACEDB genome database system
PR:		ports/20223
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-28 13:16:10 +00:00
Neil Blakey-Milner
7fb6a7b182 Add sim4, an implementation of the sim4 algorithm for aligning expressed
DNA with genomic sequences

PR:		ports/20219
Submitted by:	Johann Visagie <johann@egenetics.com>
2000-07-27 14:33:00 +00:00
Alexander Langer
7d609004d5 Add xdrawchem 0.82 - a program for drawing molecules 2000-07-19 13:23:02 +00:00
Steve Price
fdc60854fd Activating the chemeq, clustalw, paml, and phylip ports. 2000-07-10 03:26:57 +00:00
Satoshi Taoka
a6ade68cd4 Added gperiodic and xmolwt 1999-09-06 20:09:12 +00:00
David E. O'Brien
fe1e09a6cc Change Id->FreeBSD. 1999-08-25 04:58:03 +00:00
Satoshi Taoka
a7634e3e23 Added deft and ortep3 1999-05-19 13:38:46 +00:00
Satoshi Taoka
7e4a643ed1 Add platon and molden 1999-05-07 06:59:25 +00:00
Satoshi Taoka
9674eb1cb0 Add mopac and psi88 (Move mopac and psi88 from misc to biology) 1999-05-06 08:18:35 +00:00
Joseph Koshy
3b87bc1ac4 Activate tinker. 1998-11-17 04:54:28 +00:00
Steve Price
1a8f3a68f5 Turn on hmmer. 1998-07-12 23:30:50 +00:00
Vanilla I. Shu
e1870a74df Activate povchem. 1998-03-16 07:01:32 +00:00
Justin M. Seger
587c07e3f0 Activate kinemage 1998-01-29 17:25:59 +00:00
Vanilla I. Shu
94da48e798 Activate seaview. 1997-12-21 22:05:43 +00:00
Vanilla I. Shu
862cbba9c7 Activate babel. 1997-12-21 21:58:57 +00:00
Vanilla I. Shu
c5d1290f89 Activate rasmol. 1997-12-15 17:47:41 +00:00
Satoshi Asami
07eba866f1 The new ports category "biology" starts here today. No Darwin
jokes please!
1997-12-13 05:54:24 +00:00