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Commit Graph

21 Commits

Author SHA1 Message Date
Wen Heping
88e64fdede - Update to 0.5.2
- Add LICENSE
2014-04-06 04:05:43 +00:00
Gerald Pfeifer
1cd277bdce Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
2014-03-10 20:55:20 +00:00
Martin Wilke
5ecf3aa390 - Convert to PYDISTUTILS_AUTOPLIST
- Stage support
- Bump PORTREV
2014-01-31 12:31:24 +00:00
Rene Ladan
50f8eaece1 Python cleanup:
- USE_PYTHON* = 2.X -> USE_PYTHON* = 2
- USE_PYTHON* = 2.X+ -> USE_PYTHON* = yes
Reviewed by:	python (mva, rm)
Approved by:	portmgr-lurkers (mat)
2014-01-13 21:00:02 +00:00
Gerald Pfeifer
3be3e90f93 Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
 - 0^0, which returned (NaN,NaN) previously, now returns (1,+0).
 - Removed compatibility with K&R compilers, which was untestable due
   to lack of such compilers.
 - New functions
   . mpc_log10
   . mpc_mul_2si, mpc_div_2si
 - Speed-ups
   . mpc_fma
 - Bug fixes
   . mpc_div and mpc_norm now return a value indicating the effective
     rounding direction, as the other functions.
   . mpc_mul, mpc_sqr and mpc_norm now return correct results even if
     there are over- or underflows during the computation.
   . mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has
     infinite part and equals output variable is corrected.
   . mpc_fr_sub: Wrong return value for imaginary part is corrected.

Convert to the new LIB_DEPENDS standard and remove hard-coded
.so versions from a couple of dependent ports.

Bump PORTREVISIONS of all dependent ports.

PR:		183141
Approved by:	portmgr (bdrewery)
2013-10-26 00:52:33 +00:00
Wen Heping
3e2d8d2bfb - Update to 0.5.1 2013-10-04 08:09:02 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Wen Heping
b3107f6cbf - Trim Makefile headers 2013-06-01 14:22:35 +00:00
Wen Heping
f052f825e0 - Update to 0.4.5 2012-02-23 13:43:25 +00:00
Wen Heping
1ec5b32963 - Update to 0.44 2011-10-13 06:27:34 +00:00
Wen Heping
f7d6e48421 - Update to 0.4.3 2011-06-02 01:38:55 +00:00
Wen Heping
65d8cb8c00 - Update to 0.4.2 2011-04-13 09:11:20 +00:00
Wen Heping
01c6777188 - Update to 0.4.1 2010-12-02 13:42:09 +00:00
Wen Heping
a9e02fc8e4 - Update to 0.4.0 2010-10-26 00:34:36 +00:00
Greg Larkin
f657360287 - Update USE_PYTHON in Makefile to reflect upstream Python
dependency version requirement

PR:		ports/149251
Submitted by:	glarkin
Approved by:	wen (via email)
2010-08-18 14:09:34 +00:00
Wen Heping
7ac145c021 - Update to 0.3.9 2010-03-19 08:32:48 +00:00
Wen Heping
a70e97a715 - Update to 0.3.7 2009-12-24 03:14:34 +00:00
Wen Heping
ac98d03ccc - Update to 0.3.5 2009-12-21 03:29:55 +00:00
Wen Heping
e514f1a729 - Update to 0.3.4 2009-12-16 12:48:04 +00:00
Wen Heping
5a07a83836 - Update to 0.3.3 2009-12-06 08:47:36 +00:00
Wen Heping
695ed5163e pyfasta is a python module for fast, memory-efficient, pythonic
access to fasta sequence files.

WWW:    http://bitbucket.org/brentp/biostuff/src/
2009-11-18 05:53:17 +00:00