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5757 Commits

Author SHA1 Message Date
Yuri Victorovich
edffd8ead6 science/shelxle: Update 1.0.1237 -> 1.0.1242 
Reported by:	portscout
 2021-04-14 13:15:02 -07:00
Yuri Victorovich
b1f9b88ed1 science/libcint: Update 4.1.2 -> 4.1.3 
Reported by:	portscout
 2021-04-14 13:15:02 -07:00
Yuri Victorovich
a49a2e2723 science/jmol: Update 14.31.35 -> 14.31.36 
Reported by:	portscout
 2021-04-13 17:19:53 -07:00
Yuri Victorovich
fdbd0bce7c science/libcint: Update 4.0.7 -> 4.1.2 
Reported by:	portscout
 2021-04-12 17:06:51 -07:00
Piotr Kubaj
cff81a2669 science/dlib-cpp: remove the patch that is now committed upstream and breaks the build on powerpc64le 2021-04-11 22:45:40 +00:00
Piotr Kubaj
a0ead189b9 science/py-dlib: fix build on powerpc64le 
The patch has been committed to upstream and actually now breaks build.
 2021-04-11 17:08:35 +00:00
Fernando Apesteguía
70207782ab science/afni: update to 21.1.01 2021-04-11 17:37:05 +02:00
Yuri Victorovich
88305b6f9b science/simgrid: Update 3.26 -> 3.27 2021-04-10 00:24:02 -07:00
Yuri Victorovich
9b0ab740bd science/py-moltemplate: Update 2.19.7 -> 2.19.8 2021-04-09 13:42:48 -07:00
Matthias Fechner
911f04257e Regenerate all distfiles using gitlab as source. 
This regeneration is required as the new gitlab version changed
the address and the directory the source files can be downloaded.

This commit also applies some small fixes to make sure all ports using
gitlab are buildable.

Reviewed by:	mat
Approved by:	portmgr
Differential Revision:	https://reviews.freebsd.org/D29628
 2021-04-09 20:44:23 +02:00
Yuri Victorovich
e14257699a science/shelxle: Update 1.0.1235 -> 1.0.1237 
Reported by:	portscout
 2021-04-09 11:30:53 -07:00
Yuri Victorovich
fff94b28f5 science/erkale: Update g20200426 -> g20210215 2021-04-08 18:39:20 -07:00
Jan Beich
69d24a727d devel/icu: update to 69.1 
Changes:	https://github.com/unicode-org/icu/releases/tag/release-69-1
Reported by:	GitHub (watch releases)
 2021-04-08 23:33:31 +00:00
Yuri Victorovich
a75e8cc223 science/lammps: Update 10Mar2021 -> 8Apr2021 
Reported by:	GH release notification
 2021-04-08 01:54:32 -07:00
Yuri Victorovich
59f53c9796 science/molsketch: Update 0.7.1 -> 0.7.2 
Reported by:	portscout
 2021-04-07 11:47:02 -07:00
Thierry Thomas
c71776b767 astro/py-spktype01 et al.: fix the dependency on PYNUMPY 
Some ports, like astro/py-spktype01, uses the undefined variable ${NUMPY}
in their _DEPENDS fields and this must be replaced by the correct
${PYNUMPY}.

PR:		254740
Reported by:	Bojan Petrovic
Approved by:	QA blanket for the ports that I do not maintain
 2021-04-07 17:05:55 +02:00
Mathieu Arnold
cf118ccf87
One more small cleanup, forgotten yesterday. 
Reported by:	lwhsu
 2021-04-07 10:09:01 +02:00
Gleb Popov
25feb0d686 science/dlib-cpp and science/py-dlib: Update to 19.22 
Remove USE_GCC=yes as it seems to be implied by using blaslapack:openblas
 2021-04-07 10:22:33 +03:00
Fernando Apesteguía
f2e32f002d science/afni: update to 21.1.00 2021-04-07 09:02:57 +02:00
Tobias Kortkamp
0f053e77c1
science/libecpint: Add explicit Python build dependency (D29353) 
This unbreaks the build when using devel/samurai.

It previously got it through ninja which has a run dependency on
Python.

-- Could NOT find Python (missing: Python_EXECUTABLE Interpreter)
CMake Error at src/CMakeLists.txt:22 (file):
  file failed to open for reading (No such file or directory):

    /wrkdirs/usr/ports/science/libecpint/work/.build/src/qlist.txt

CMake Error at src/CMakeLists.txt:24 (add_custom_command):
  add_custom_command Wrong syntax.  A TARGET or OUTPUT must be specified.

http://package18.nyi.freebsd.org/data/122amd64-default-foo/2021-04-04_07h37m38s/logs/errors/libecpint-1.0.5.log

PR:		254678
 2021-04-07 06:19:56 +02:00
Yuri Victorovich
80ea9fe904 science/yoda: Update 1.8.5 -> 1.9.0 2021-04-06 16:13:08 -07:00
Adriaan de Groot
bc2e03280a science/kst2: fix build ahead of CMake 3.20 
Multiple else() blocks with one if() were treated as if they
were elseif() blocks except for the last one; this is now a
syntax error.
 2021-04-07 01:02:53 +02:00
Mathieu Arnold
135fdeebb9
all: Remove all other $FreeBSD keywords. 2021-04-06 16:31:13 +02:00
Mathieu Arnold
305f148f48
Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
Piotr Kubaj
cb9ab6840b science/simgrid: add libunwind to LIB_DEPENDS on powerpc64le 2021-04-06 14:24:07 +02:00
Fernando Apesteguía
58abcc29b7 science/afni: update to 21.0.21 2021-03-28 07:56:12 +00:00
Yuri Victorovich
9ec33301c6 science/shelxle: Update 1.0.1233 -> 1.0.1235 
Reported by:	portscout
 2021-03-25 09:59:54 +00:00
Yuri Victorovich
7e02b37866 science/smoldyn: Update 2.63 -> 2.64 
Reported by:	portscout
 2021-03-25 09:57:47 +00:00
Yuri Victorovich
cadca7b5f5 science/abinit: Update 9.4.0 -> 9.4.1 
Reported by:	portscout
 2021-03-24 03:39:58 +00:00
Alexey Dokuchaev
ee895ff14c Fix spelling mistakes, typos, poor wording, hyphenation, jargonisms, 
contractions, "<portname> is ..." cases, missing Oxford commas, and
other miscellaneous style bugs in the COMMENT line.
 2021-03-22 10:17:43 +00:00
Yuri Victorovich
c3a575600d science/py-phono3py: Update 1.13.3.27 -> 1.22.3 2021-03-20 08:22:18 +00:00
Yuri Victorovich
d628f8b31b science/py-phonopy: 2.9.1 -> 2.9.3 2021-03-20 06:21:55 +00:00
Yuri Victorovich
ae1f7a4d45 science/py-pymatgen: Update 2022.0.4 -> 2022.0.5 2021-03-20 06:19:31 +00:00
TAKATSU Tomonari
29f3ff71c2 - Update to 1.7-6 2021-03-20 04:59:04 +00:00
Fernando Apesteguía
81bc34e8f7 science/afni: update to 21.0.20 
While here, adopt port.

Reported by:	portscout
 2021-03-18 16:36:28 +00:00
Yuri Victorovich
81ab055ba2 science/agrum: Update 0.19.2 -> 0.19.3 2021-03-18 10:14:38 +00:00
Yuri Victorovich
58c3f77816 science/jmol: Update 14.31.34 -> 14.31.35 
Reported by:	portscout
 2021-03-18 09:22:08 +00:00
Fernando Apesteguía
29acc5bcc6 science/afni: update to 21.0.19 
Reported by:	portscout
 2021-03-17 16:37:44 +00:00
Neel Chauhan
2b10aaeba4 science/afni: Update to 21.0.18 2021-03-16 19:13:51 +00:00
Yuri Victorovich
a1fe1d4e22 science/shelxle: Update 1.0.1231 -> 1.0.1233 
Reported by:	portscout
 2021-03-16 17:13:07 +00:00
TAKATSU Tomonari
4cd40d8e2a - Update to 1.7-5 2021-03-16 12:12:54 +00:00
Loïc Bartoletti
0b7a24020a PyQt5: Update PyQt5 to 5.15.4 and py-qtbuilder to 1.9.1 
PR:		254218
Exp-run by:	antoine
 2021-03-16 09:29:53 +00:00
Yuri Victorovich
545a16f4b5 science/elk: Update 6.8.4 -> 7.1.14 
Reported by:	upstream notification
 2021-03-15 18:04:25 +00:00
Fernando Apesteguía
6def0da4e7 science/afni: update to 21.0.17 
Reported by:	portscout
 2021-03-15 07:54:39 +00:00
Yuri Victorovich
b2ad61a1ee science/py-dipy: Update 1.3.0 -> 1.4.0 2021-03-15 07:02:32 +00:00
Yuri Victorovich
6e113814e0 science/py-abipy: Update 0.8.0 -> 0.9.0 2021-03-15 06:39:08 +00:00
Yuri Victorovich
5d68b2a6ab science/shelxle: Update 1.0.1229 -> 1.0.1231 
Reported by:	portscout
 2021-03-14 07:45:06 +00:00
Yuri Victorovich
7bdf591662 science/votca: Update 1.6.3 -> 2021 
Reported by:	portscout
 2021-03-14 07:38:07 +00:00
Yuri Victorovich
351a5a5ad7 science/molsketch: Update 0.7.0 -> 0.7.1 2021-03-12 23:12:16 +00:00
Thierry Thomas
f232c0d3c7 Upgrade to v2021.3.0. 
Release notes at
<https://github.com/fekad/jupyter-jsmol/releases/tag/v2021.3.0>.
 2021-03-12 17:35:36 +00:00