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Commit Graph

516 Commits

Author SHA1 Message Date
Maho Nakata
8d6263cb51 Add port math/octave-forge-octgpr
This is octgpr.

The package allows interpolating and smoothing scattered
multidimensional data using Gaussian Process Regression (also known
as Kriging).

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:51:17 +00:00
Maho Nakata
c2110a66a2 Add port math/octave-forge-ocs
This is ocs.
Package for solving DC and transient MNA equation stemming from
electrical circuit.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:47:44 +00:00
Maho Nakata
5a47dd87be Add port math/octave-forge-nnet
This is nnet. A feed forward multi-layer neural network.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:21:25 +00:00
Maho Nakata
3f9dbf993f Add port math/octave-forge-parallel
This is parallel. Parallel execution package for cluster computers

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:15:50 +00:00
Maho Nakata
223656a4e1 Add port math/octave-forge-octcdf
This is octcdf. A NetCDF interface for octave

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:13:17 +00:00
Maho Nakata
0634417945 Add port math/octave-forge-nan
This is nan. Missing value statistical toolbox

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:10:05 +00:00
Maho Nakata
f2cf6fce7e Add port math/octave-forge-multicore
This is multicore.
An Octave-forge package providing functions for
parallel processing on multiple cores.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:08:03 +00:00
Maho Nakata
f4f51fd84a Add port math/octave-forge-missing-functions
This is missing-functions.
Find functions that are in Matlab but not in Octave.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:05:48 +00:00
Maho Nakata
47507be7df Add port math/octave-forge-miscellaneous
This is miscellaneous.
Miscellaneous tools including waitbar, xml tools, etc

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:03:28 +00:00
Maho Nakata
d94969d340 Add port math/octave-forge-econometrics
This is econometrics.
Econometrics functions including MLE and GMM based techniques.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 04:00:50 +00:00
Maho Nakata
7a2daeea0a Add port math/octave-forge-ident
This is ident.
Addition System Indentification Control functions.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:57:27 +00:00
Maho Nakata
36e96a0933 Add port math/octave-forge-general
This is general. General tools for octave.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:54:38 +00:00
Maho Nakata
a189331974 Add port math/octave-forge-image
This is image.
The Octave-forge Image package provides functions for
reading, writing, and processing images. The package supports
almost all image formats through the use of ImageMagick.
The package also provides functions for feature extraction, image
statistics, spatial and geometric transformations, morphological
operations, linear filtering, and much more.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:51:49 +00:00
Maho Nakata
2622be3959 Add port math/octave-forge-io
This is io. Input/Output in external formats.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:48:43 +00:00
Maho Nakata
cd96f388f2 Add port math/octave-forge-integration
This is integration.
Toolbox for 1-D, 2-D, and n-D Numerical Integration

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:46:20 +00:00
Maho Nakata
9f798d581c This is informationtheory.
Functions and routines for basic Information Theory definitions, and source coding.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:43:02 +00:00
Maho Nakata
f7c98d53b2 Add port math/octave-forge-linear-algebra
This is linear-algebra.
Additional linear algebra code, including general SVD and matrix functions.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:37:39 +00:00
Maho Nakata
5a8acb400a Add port math/octave-forge-combinatorics
This is combinatorics. Combinatorics functions, incuding partitioning.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:34:01 +00:00
Maho Nakata
1a5cf90664 Add port math/octave-forge-civil-engineering
This is civil-engineering.
Functions to solution some ODE's in Civil Engineering.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:31:35 +00:00
Maho Nakata
588c86c090 Add port math/octave-forge-bioinfo.
This is bioinfo. Bioinformatics manipulation

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:27:56 +00:00
Maho Nakata
2fdf440aba Add port math/octave-forge-gsl.
This is gsl, Octave bindings to the GNU Scientific Library.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:24:19 +00:00
Maho Nakata
7bee1530ec Add port math/octave-forge-engine.
This is engine.
 An external interface library for Octave

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:13:05 +00:00
Maho Nakata
fad0e40e1a Add port math/octave-forge-fpl.
Collection of routines to plot data on unstructured triangular and
tetrahedral meshes

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 03:02:26 +00:00
Maho Nakata
d5bd4d2dc3 Adding math/octave-forge-audio.
This is for Audio recording, processing and playing tools.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 02:13:09 +00:00
Maho Nakata
bf34c6a63a Add math/octave-forge-arpack port.
Octave bindings to ARPACK, including the eigs and svds function.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030                                                                                    Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 02:10:38 +00:00
Maho Nakata
af21c1d7f0 Add math/octave-forge-ann port.
This package is "ann".
The Octave-forge ANN package wraps the ANN library, which
provides data structures and functions for computing exact
and approximate nearest neighbors on an arbitrarily high dimensional point set.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 02:07:04 +00:00
Maho Nakata
996cc28fa0 Add math/octave-forge-ad port.
This package is "Automatic Forward Differentiation (AD)".

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 02:00:25 +00:00
Maho Nakata
75cd39c216 Add math/octave-forge-base.
This baseport provides the basic directory structure.  Deleting this package
will completely erase all the structure, and remaining files, associated with
the octave packaging system.  This is useful if things go wrong with the
octave packaging system.

(The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.)

PR:             127030
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>
2008-09-08 00:34:17 +00:00
Martin Wilke
68c8e53bb2 SymPy is a Python library for symbolic mathematics.
It aims to become a full-featured computer algebra
system (CAS) while keeping the code as simple as
possible in order to be comprehensible and easily
extensible. SymPy is written entirely in Python and
does not require any external libraries.

WWW:	http://code.google.com/p/sympy/

PR:		ports/126394
Submitted by:	Wen Heping <wenheping at gmail.com>
2008-08-11 22:14:50 +00:00
Rong-En Fan
b1222ca908 This module converts to and from Base36 numbers (0..9 - A..Z)
It was created because of an article/challenge in "The Perl Review"

WWW: http://search.cpan.org/dist/Math-Base36/

PR:		ports/126383
Submitted by:	Yi-Hsuan Hsin <mhsin at mhsin.org>
2008-08-09 12:53:04 +00:00
Martin Wilke
84c1313bcc Gmm++ is a generic C++ template library for sparse, dense and skyline
matrices. It is built as a set of generic algorithms (mult, add,
copy, sub-matrices, dense and sparse solvers ...) for any interfaced
vector type or matrix type. It can be view as a glue library allowing
cooperation between several vector and matrix types. However, basic
sparse, dense and skyline matrix/vector types are built in Gmm++,
hence it can be used as a standalone linear algebra library.
Interfacing a vector or matrix type means writing "traits" objects
called "linalg_traits", which describe their properties. The library
offers predefined dense, sparse and skyline matrix types.

WWW:	http://home.gna.org/getfem/
2008-08-06 10:48:23 +00:00
Martin Wilke
b16eff54df Readded in math/
A C-coded Python extension module that wraps the GMP library to provide
to Python code fast multiprecision arithmetic (integer, rational, and
float), random number generation, advanced number-theoretical functions,
and more.

WWW:   http://code.google.com/p/gmpy/
2008-07-18 13:15:24 +00:00
Martin Wilke
a289f0dfc9 igraph is a free software package for creating and manipulating
undirected and directed graphs. It includes implementations for
classic graph theory problems like minimum spanning trees and
network flow, and also implements algorithms for some recent
network analysis methods, like community structure search.

igraph contains functions for generating regular and random graphs,
manipulating graphs, assigning attributes to vertices and edges.
It can calculate various structural properties, includes heuristics
for community structure detection, supports many file formats.

WWW:   http://cneurocvs.rmki.kfki.hu/igraph/

PR:		ports/125534
Submitted by:	Wen Heping <wenheping at gmail.com>
2008-07-18 12:36:04 +00:00
Anton Berezin
a73a57c4d0 Add math/p5-Set-IntSpan-Fast-XS, a faster (written in C) version
of math/p5-Set-IntSpan-Fast.
2008-07-02 08:07:48 +00:00
Pietro Cerutti
3c9d3c55b9 - Add goblin, repocopied from misc/ 2008-06-30 20:21:14 +00:00
Martin Wilke
b373c918fb MathDOM is a set of Python modules (using PyXML or
lxml, and pyparsing) that import mathematical terms
as a Content MathML DOM. It currently parses MathML
and literal infix terms into a DOM document and writes
out MathML and literal infix/prefix/postfix/Python
terms. The DOM elements are enhanced by domain specific
methods that make using the DOM a little easier.
Implementations based on PyXML and lxml/libxml2 are
available.

WWW:   http://pypi.python.org/pypi/mathdom/

PR:		ports/124971
Submitted by:	Wen Heping <wenheping at gmail.com>
2008-06-27 11:40:56 +00:00
Li-Wen Hsu
a8dcd66e6e Add stp , a Decision Procedure for Bitvectors and Arrays. 2008-06-19 01:52:25 +00:00
Pav Lucistnik
8712d22249 - Delete expired port math/umfpack: outdated subset of math/sparsesuite 2008-06-18 22:52:56 +00:00
Pav Lucistnik
333c9da312 - Delete expired port math/sc: distfile disappeared 2008-06-18 22:38:36 +00:00
Li-Wen Hsu
cd5f0925eb Add py-networkx 0.36, tools for complex network.
PR:		ports/124620
Submitted by:	dikshie <dikshie AT sfc.wide.ad.jp>
2008-06-15 21:16:01 +00:00
Maho Nakata
fa9ee9fb77 The SDPA-GMP (The GMP version of SemiDefinite Programming Algorithm)
is a software package for solving semidefinite program (SDP), intended
for very hard to solve SDPs and SDPs requires ultra high accuracy.
It is based on a Mehrotra-type predictor-corrector infeasible
primal-dual interior-point method. The SDPA-GMP shares the same
features as the SDPA, excpt for calculations will be done
with multiple precision arithmetics via the GMP
(the GNU Multiple Precision Arithmetic Library).

WWW: http://sdpa.indsys.chuo-u.ac.jp/sdpa/index.html
2008-04-11 00:27:27 +00:00
Martin Wilke
82a46c8234 The TiMBL software package is a fast, decision-tree-based implementation
of k-nearest neighbor classification. The package includes the IB1, IB2,
TRIBL, TRIBL2, and IGTree algorithms, and offers various weighting metrics.

WWW: http://ilk.uvt.nl/timbl/

PR:		ports/121661
Submitted by:	Yuri Victorovich <yuri at tsoft.com>
2008-03-13 12:47:53 +00:00
Tilman Keskinoz
b7509990d6 Add Eigen a lightweight C++ template library for vector and matrix math 2008-02-09 21:59:20 +00:00
Tilman Keskinoz
2818b6fdd2 Add facile, a Functional Constraint Library written in Ocaml 2008-02-09 21:57:03 +00:00
Thomas Abthorpe
6ceda39d6b RAPID is a robust and accurate polygon interference detection library
for large environments composed of unstructured models.

WWW: http://www.cs.unc.edu/~geom/OBB/OBBT.html

PR:		ports/118556
Submitted by:	Jason W. Bacon <bacon at smithers.neuro.mcw.edu>
2008-02-09 01:59:37 +00:00
Martin Wilke
d26d67cc3d This is the Statistical T-Test module to compare 2 independentsamples.
It takes 2 array of point measures, compute the confidence intervals
using the PointEstimation module (which is also included in this package)
and use the T-statistic to test the null hypothesis. If the null hypothesis
is rejected, the difference will be given as the lower_clm and upper_clm of
the TTest object.

WWW:	http://search.cpan.org/dist/Statistics-TTest/

PR:		ports/119740
Submitted by:	dawe <daweonline at gmail.com>
2008-01-21 21:59:17 +00:00
Martin Wilke
6a5d9cfbdd This package lets you create and manipulate complex numbers. By default, Perl
limits itself to real numbers, but an extra use statement brings full complex
support, along with a full set of mathematical functions typically associated
with and/or extended to complex numbers.

WWW:	http://search.cpan.org/dist/Math-Complex/

PR:		ports/119441
Submitted by:	Jin-Shan Tseng <tjs at cdpa.nsysu.edu.tw>
2008-01-10 23:31:58 +00:00
Erwin Lansing
5275170f61 Hook vtk5 up to the build after repocopy. 2008-01-10 11:05:27 +00:00
Andrew Pantyukhin
6fae5726a0 Add port math/lybniz:
Lybniz is an easy to use mathematical function graph plotter
using pyGTK.

WWW: http://lybniz2.sourceforge.net/
2007-12-14 16:06:37 +00:00
Edwin Groothuis
108887fee1 New port: math/linux-SHA-1_collision_search_graz Distributed client
searching for weakness in SHA-1 hash

    SHA-1 Collision Search Graz is a distributed computing project
    -- people from through out the world download and run software
    to band together to make one of the largest supercomputers in
    the world. Every computer makes the project closer to our goals.

    The project is trying to see if like MD4 in 1996, MD5/RIPEMD
    in 2004, and the the direct predecessor SHA-0 in 2004 also,
    there is a weakness in the hash.

    WWW: http://boinc.iaik.tugraz.at/sha1_coll_search/

PR:			ports/116691
Submitted by:		Tuc <freebsd-ports@t-b-o-h.net>
2007-10-01 08:14:05 +00:00